BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780380|ref|YP_003064793.1| flagellar basal body rod
protein FlgC [Candidatus Liberibacter asiaticus str. psy62]
         (134 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780380|ref|YP_003064793.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040057|gb|ACT56853.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 134

 Score =  279 bits (713), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 134/134 (100%), Positives = 134/134 (100%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG
Sbjct: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ
Sbjct: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120

Query: 121 SHDMMTTTLDLLRD 134
           SHDMMTTTLDLLRD
Sbjct: 121 SHDMMTTTLDLLRD 134


>gi|315121849|ref|YP_004062338.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495251|gb|ADR51850.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 134

 Score =  241 bits (614), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 114/134 (85%), Positives = 122/134 (91%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MDYL+AS+ IANSGL VQS+RM +ISENIANARTTG+T GSDPYRRKTISFEEVMH  GG
Sbjct: 1   MDYLVASSQIANSGLTVQSSRMHVISENIANARTTGNTAGSDPYRRKTISFEEVMHEGGG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRVKK+ VD+S FVEEFDP HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ IKQ
Sbjct: 61  VRVKKVSVDKSPFVEEFDPSHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQIIKQ 120

Query: 121 SHDMMTTTLDLLRD 134
           S DM+ TTLDLLRD
Sbjct: 121 SRDMIATTLDLLRD 134


>gi|190890361|ref|YP_001976903.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|190695640|gb|ACE89725.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 138

 Score =  178 bits (451), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 106/136 (77%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+A G+VK PNVNVLVE ADMRE NR Y ANLQT
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADAKGVVKLPNVNVLVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D++++T+DLL+
Sbjct: 121 IKQTRDLISSTIDLLK 136


>gi|327193034|gb|EGE59946.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512]
          Length = 138

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 107/136 (78%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-HGSG 59
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M H SG
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDHVSG 60

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VKK+GVD+  F  EFDP +P A+A G+VK PNVNVLVE ADMRE NR Y ANLQT
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADAKGVVKLPNVNVLVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D++++T+DLL+
Sbjct: 121 IKQTRDLISSTIDLLK 136


>gi|116250480|ref|YP_766318.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115255128|emb|CAK06202.1| putative flagellar basal-body rod protein flgc (putative proximal
           rod protein) [Rhizobium leguminosarum bv. viciae 3841]
          Length = 138

 Score =  176 bits (446), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 84/136 (61%), Positives = 105/136 (77%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  S G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRSNG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+  G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVGVKKVGVDEGDFSTEFDPSNPAADQKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D++++T+DLL+
Sbjct: 121 IKQTRDLISSTIDLLK 136


>gi|86356310|ref|YP_468202.1| flagellar basal body rod protein FlgC [Rhizobium etli CFN 42]
 gi|86280412|gb|ABC89475.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
          Length = 138

 Score =  176 bits (446), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 83/136 (61%), Positives = 106/136 (77%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRTSG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+A G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADAKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I+Q+ D++++T+DLL+
Sbjct: 121 IRQTRDLISSTIDLLK 136


>gi|209547926|ref|YP_002279843.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533682|gb|ACI53617.1| flagellar basal-body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 138

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/136 (61%), Positives = 105/136 (77%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+  G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVDVKKVGVDEGDFSTEFDPSNPAADQKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D++++T+DLL+
Sbjct: 121 IKQTRDLISSTIDLLK 136


>gi|218672513|ref|ZP_03522182.1| flagellar basal body rod protein FlgC [Rhizobium etli GR56]
          Length = 138

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/136 (61%), Positives = 105/136 (77%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+  G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADQKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D++++T+DLL+
Sbjct: 121 IKQTRDLISSTIDLLK 136


>gi|241203104|ref|YP_002974200.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856994|gb|ACS54661.1| flagellar basal-body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 138

 Score =  175 bits (443), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/136 (61%), Positives = 105/136 (77%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRTNG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+  G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVGVKKVGVDEGDFSTEFDPSNPAADPKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D++++T+DLL+
Sbjct: 121 IKQTRDLISSTIDLLK 136


>gi|15887900|ref|NP_353581.1| flagellar basal body rod protein FlgC [Agrobacterium tumefaciens
           str. C58]
 gi|20141427|sp|Q44336|FLGC_AGRT5 RecName: Full=Flagellar basal-body rod protein flgC
 gi|15155492|gb|AAK86366.1| flagellar basal-body rod protein [Agrobacterium tumefaciens str.
           C58]
          Length = 139

 Score =  174 bits (441), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 84/136 (61%), Positives = 110/136 (80%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSG 59
           MD L A++ IA SGL VQS R++I+SENIANAR+TGDTPG+DPYRRKT++F  E+ H SG
Sbjct: 1   MDPLSAASKIAGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDHVSG 60

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+VKK+GVD+  FV E+DPG+P A+ +G+VK PNVNVL+E ADMRE NR Y ANLQ 
Sbjct: 61  VERVKVKKLGVDRGDFVHEYDPGNPAADTNGMVKMPNVNVLIEMADMREANRSYDANLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I+Q+ D++ +T+DLL+
Sbjct: 121 IRQTRDLVASTIDLLK 136


>gi|325291941|ref|YP_004277805.1| flagellar basal body rod protein FlgC [Agrobacterium sp. H13-3]
 gi|325059794|gb|ADY63485.1| flagellar basal body rod protein FlgC [Agrobacterium sp. H13-3]
          Length = 139

 Score =  173 bits (438), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 82/136 (60%), Positives = 107/136 (78%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A++ IA SGL VQS R++I+SENIANAR+TGDTPG+DPYRRKT++F   +    G
Sbjct: 1   MDPLSAASKIAGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDRVSG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V+   VKK+GVD+  FV E+DPG+P A+ SG+VK PNVNVL+E ADMRE NR Y ANLQ 
Sbjct: 61  VQRVTVKKLGVDRGDFVHEYDPGNPAADTSGMVKMPNVNVLIEMADMREANRSYDANLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I+Q+ D++ +T+DLL+
Sbjct: 121 IRQTRDLVASTIDLLK 136


>gi|222147569|ref|YP_002548526.1| flagellar basal body rod protein FlgC [Agrobacterium vitis S4]
 gi|221734557|gb|ACM35520.1| flagellar basal-body rod protein [Agrobacterium vitis S4]
          Length = 145

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 106/135 (78%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
           D L ++  IA SGL VQS R++I+SENIANA++TGDTPG++PYRRKTI+F   M  + G 
Sbjct: 8   DPLTSALKIAGSGLDVQSTRLRIVSENIANAQSTGDTPGANPYRRKTITFGSEMDRATGT 67

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+VKK+G D+S F EE+DP +P A+A G VK PNVNVL+E ADMRE NR Y ANLQ++
Sbjct: 68  EIVKVKKLGFDKSNFTEEYDPSNPAADAKGYVKMPNVNVLIEMADMREANRTYEANLQSV 127

Query: 119 KQSHDMMTTTLDLLR 133
           KQ+ D++T+TLDLL+
Sbjct: 128 KQTRDLITSTLDLLK 142


>gi|218516085|ref|ZP_03512925.1| flagellar basal body rod protein FlgC [Rhizobium etli 8C-3]
          Length = 132

 Score =  172 bits (436), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 81/128 (63%), Positives = 101/128 (78%), Gaps = 3/128 (2%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR---VKK 65
            IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + GV    VKK
Sbjct: 3   KIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASGVETVNVKK 62

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +GVD+  F  EFDP +P A+A G+VK PNVNVLVE ADMRE NR Y ANLQTIKQ+ D++
Sbjct: 63  VGVDEGDFSTEFDPSNPAADAKGVVKLPNVNVLVEMADMREANRSYDANLQTIKQTRDLI 122

Query: 126 TTTLDLLR 133
           ++T+DLL+
Sbjct: 123 SSTIDLLK 130


>gi|1086559|gb|AAB68966.1| FlgC [Agrobacterium tumefaciens]
 gi|2459712|gb|AAB71788.1| FlgC [Agrobacterium tumefaciens]
          Length = 139

 Score =  170 bits (431), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 81/136 (59%), Positives = 110/136 (80%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSG 59
           MD L A++ ++ SGL VQS R++I+SENIANAR+TGDTPG+DPYRRKT++F  E+ H SG
Sbjct: 1   MDPLSAASKMSGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDHVSG 60

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+VKK+GVD+  FV E+DPG+P A+ +G+VK PNVNV++E ADMRE NR Y ANLQ 
Sbjct: 61  VERVKVKKLGVDRGDFVHEYDPGNPAADTNGMVKMPNVNVVIEMADMREANRSYDANLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I+Q+ D++ +T+DLL+
Sbjct: 121 IRQTRDLVASTIDLLK 136


>gi|227820856|ref|YP_002824826.1| flagellar basal body rod protein FlgC [Sinorhizobium fredii NGR234]
 gi|227339855|gb|ACP24073.1| flagellar basal-body rod protein FlgC [Sinorhizobium fredii NGR234]
          Length = 139

 Score =  169 bits (428), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 81/136 (59%), Positives = 103/136 (75%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSG 59
           MD L ++  ++ SGL  +S R++I+SENIANAR+TGD PG+DPYRRKTISF  EV   SG
Sbjct: 1   MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDVPGADPYRRKTISFAAEVDRASG 60

Query: 60  G--VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V+++G D S F  EFDPG+P A+  G+VK PNVNVL+E ADMRE NR Y ANLQT
Sbjct: 61  ASLVEVQRLGTDDSDFSIEFDPGNPAADEKGMVKMPNVNVLIEMADMREANRAYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQS D+++ T+DLLR
Sbjct: 121 VKQSRDLISQTIDLLR 136


>gi|150395483|ref|YP_001325950.1| flagellar basal body rod protein FlgC [Sinorhizobium medicae
           WSM419]
 gi|150026998|gb|ABR59115.1| flagellar basal-body rod protein FlgC [Sinorhizobium medicae
           WSM419]
          Length = 139

 Score =  167 bits (424), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 80/136 (58%), Positives = 103/136 (75%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSG 59
           MD L ++  ++ SGL  +S R++I+SENIANAR+TGD PG+DPYRRKTISF  EV   SG
Sbjct: 1   MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDAPGTDPYRRKTISFAAEVDRASG 60

Query: 60  G--VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V+++G D S F  EFDPG+P A+  G+VK PNVN+L+E ADMRE NR Y ANLQT
Sbjct: 61  ASLVEVERLGTDDSDFNVEFDPGNPAADEKGMVKLPNVNILIEMADMREANRAYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D+++ T+DLLR
Sbjct: 121 IKQARDLISQTIDLLR 136


>gi|15964413|ref|NP_384766.1| flagellar basal body rod protein FlgC [Sinorhizobium meliloti 1021]
 gi|307311555|ref|ZP_07591196.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti
           BL225C]
 gi|307318910|ref|ZP_07598341.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti AK83]
 gi|17380478|sp|Q52944|FLGC_RHIME RecName: Full=Flagellar basal-body rod protein flgC
 gi|15073590|emb|CAC45232.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
 gi|306895324|gb|EFN26079.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti AK83]
 gi|306899572|gb|EFN30201.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti
           BL225C]
          Length = 139

 Score =  167 bits (424), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 80/136 (58%), Positives = 103/136 (75%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSG 59
           MD L ++  ++ SGL  +S R++I+SENIANAR+TGD PG+DP+RRKTISF  EV   SG
Sbjct: 1   MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASG 60

Query: 60  G--VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V+++G D S F  EFDPG+P A+  G+VK PNVN+L+E ADMRE NR Y ANLQT
Sbjct: 61  ASLVEVERLGTDDSDFNIEFDPGNPAADEKGMVKLPNVNILIEMADMREANRAYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQS D+++ T+DLLR
Sbjct: 121 IKQSRDLISQTIDLLR 136


>gi|2916794|emb|CAA11960.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
          Length = 139

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/136 (58%), Positives = 102/136 (75%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSG 59
           MD L  +  ++ SGL  +S R++I+SENIANAR+TGD PG+DP+RRKTISF  EV   SG
Sbjct: 1   MDPLTLALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASG 60

Query: 60  G--VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V+++G D S F  EFDPG+P A+  G+VK PN+N+L+E ADMRE NR Y ANLQT
Sbjct: 61  ASLVEVERLGTDDSEFNIEFDPGNPAADEKGMVKLPNLNILIEMADMREANRAYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQS D+++ T+DLLR
Sbjct: 121 IKQSRDLISQTIDLLR 136


>gi|222084863|ref|YP_002543392.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722311|gb|ACM25467.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 138

 Score =  164 bits (416), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 77/137 (56%), Positives = 104/137 (75%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++++SENIANAR+TGDTPG+DPYRRKT++F   +  + G
Sbjct: 1   MDPLSAALKIAGSGLEAQSTRLRVVSENIANARSTGDTPGADPYRRKTVTFGAELDRANG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+G D   FVE++DP +P A+  G VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VTTVGVKKMGEDTGKFVEQYDPDNPAADQKGYVKMPNVNILVEMADMREANRSYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           ++Q+ D++++T+DLL++
Sbjct: 121 VRQARDLISSTIDLLKN 137


>gi|2275159|gb|AAB81411.1| FlgC [Sinorhizobium meliloti]
          Length = 138

 Score =  163 bits (413), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 78/135 (57%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGG 60
           D L  +  ++ SGL  +S R++I+SENIANAR+TGD PG+DP+RRKTISF  EV   SG 
Sbjct: 1   DPLTLALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASGA 60

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V V+++G D S F  EFDPG+P A+  G+VK PN+N+L+E ADMRE NR Y ANLQTI
Sbjct: 61  SLVEVERLGTDDSEFNIEFDPGNPAADEKGMVKLPNLNILIEMADMREANRAYEANLQTI 120

Query: 119 KQSHDMMTTTLDLLR 133
           KQS D+++ T+DLLR
Sbjct: 121 KQSRDLISQTIDLLR 135


>gi|158422260|ref|YP_001523552.1| flagellar basal body rod protein FlgC [Azorhizobium caulinodans ORS
           571]
 gi|158329149|dbj|BAF86634.1| flagellar basal-body rod protein [Azorhizobium caulinodans ORS 571]
          Length = 140

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 76/136 (55%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           +D L  +  IA SGL VQ+ RM+++SEN+AN R+TG TPG+DPY RKTI F+  +    G
Sbjct: 2   IDPLKVAGQIAGSGLQVQAQRMRVVSENLANMRSTGSTPGADPYTRKTIQFQAELDRTLG 61

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V+VK +GVDQ+ F+ E+DPG+P A+ SG+VK PNVN+L E ADMRE NR Y ANLQ 
Sbjct: 62  ASNVKVKSLGVDQAPFLTEYDPGNPAADESGMVKLPNVNMLTEMADMREANRSYEANLQM 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  M+  T+DLLR
Sbjct: 122 IKQTRSMVAMTVDLLR 137


>gi|148558590|ref|YP_001257211.1| flagellar basal body rod protein FlgC [Brucella ovis ATCC 25840]
 gi|148369875|gb|ABQ62747.1| flagellar basal-body rod protein FlgC [Brucella ovis ATCC 25840]
          Length = 140

 Score =  159 bits (403), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 75/135 (55%), Positives = 103/135 (76%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGG 60
           D L ++  IA SGL+VQS R++I+SENIANA++T  T  +DPYRRKT+SF  E+  G+G 
Sbjct: 4   DALQSTLKIAASGLSVQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRAELEQGTGA 63

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|306846280|ref|ZP_07478841.1| flagellar basal-body rod protein FlgC [Brucella sp. BO1]
 gi|306273275|gb|EFM55144.1| flagellar basal-body rod protein FlgC [Brucella sp. BO1]
          Length = 140

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 75/135 (55%), Positives = 102/135 (75%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGG 60
           D L ++  IA SGL+ QS R++IISENIANA++T  T  +DPYRRKT+SF  E+  G+G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIISENIANAQSTARTADADPYRRKTVSFRTELEQGTGA 63

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|254720612|ref|ZP_05182423.1| flagellar basal body rod protein FlgC [Brucella sp. 83/13]
 gi|265985652|ref|ZP_06098387.1| flagellar basal-body rod protein FlgC [Brucella sp. 83/13]
 gi|306838574|ref|ZP_07471411.1| flagellar basal-body rod protein FlgC [Brucella sp. NF 2653]
 gi|264664244|gb|EEZ34505.1| flagellar basal-body rod protein FlgC [Brucella sp. 83/13]
 gi|306406360|gb|EFM62602.1| flagellar basal-body rod protein FlgC [Brucella sp. NF 2653]
          Length = 140

 Score =  158 bits (399), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 102/135 (75%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGG 60
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF  E+  G+G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADADPYRRKTVSFRTELEQGTGA 63

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|17989433|ref|NP_542066.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 1
           str. 16M]
 gi|62317101|ref|YP_222954.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 1 str.
           9-941]
 gi|83269093|ref|YP_418384.1| flagellar basal body rod protein FlgC [Brucella melitensis biovar
           Abortus 2308]
 gi|163844344|ref|YP_001621999.1| flagellar basal body rod protein FlgC [Brucella suis ATCC 23445]
 gi|189022366|ref|YP_001932107.1| flagellar basal body rod protein FlgC [Brucella abortus S19]
 gi|225628623|ref|ZP_03786657.1| flagellar basal-body rod protein FlgC [Brucella ceti str. Cudo]
 gi|225686010|ref|YP_002733982.1| flagellar basal body rod protein FlgC [Brucella melitensis ATCC
           23457]
 gi|237816663|ref|ZP_04595655.1| flagellar basal-body rod protein FlgC [Brucella abortus str. 2308
           A]
 gi|254691414|ref|ZP_05154668.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 6 str.
           870]
 gi|254695288|ref|ZP_05157116.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698386|ref|ZP_05160214.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254699459|ref|ZP_05161287.1| flagellar basal body rod protein FlgC [Brucella suis bv. 5 str.
           513]
 gi|254706294|ref|ZP_05168122.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
           M163/99/10]
 gi|254711412|ref|ZP_05173223.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
           B2/94]
 gi|254712011|ref|ZP_05173822.1| flagellar basal body rod protein FlgC [Brucella ceti M644/93/1]
 gi|254715080|ref|ZP_05176891.1| flagellar basal body rod protein FlgC [Brucella ceti M13/05/1]
 gi|256014940|ref|YP_003104949.1| flagellar basal body rod protein [Brucella microti CCM 4915]
 gi|256029958|ref|ZP_05443572.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
           M292/94/1]
 gi|256043071|ref|ZP_05446015.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256059610|ref|ZP_05449808.1| flagellar basal body rod protein FlgC [Brucella neotomae 5K33]
 gi|256111945|ref|ZP_05452896.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 3
           str. Ether]
 gi|256252926|ref|ZP_05458462.1| flagellar basal body rod protein FlgC [Brucella ceti B1/94]
 gi|256256600|ref|ZP_05462136.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 9 str.
           C68]
 gi|256262867|ref|ZP_05465399.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|260544339|ref|ZP_05820160.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260564301|ref|ZP_05834786.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260757028|ref|ZP_05869376.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 6 str.
           870]
 gi|260762844|ref|ZP_05875176.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882838|ref|ZP_05894452.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 9 str.
           C68]
 gi|261215657|ref|ZP_05929938.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 3 str.
           Tulya]
 gi|261216790|ref|ZP_05931071.1| flagellar basal-body rod protein FlgC [Brucella ceti M13/05/1]
 gi|261220017|ref|ZP_05934298.1| flagellar basal-body rod protein FlgC [Brucella ceti B1/94]
 gi|261313738|ref|ZP_05952935.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M163/99/10]
 gi|261319020|ref|ZP_05958217.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           B2/94]
 gi|261319657|ref|ZP_05958854.1| flagellar basal-body rod protein FlgC [Brucella ceti M644/93/1]
 gi|261323579|ref|ZP_05962776.1| flagellar basal-body rod protein FlgC [Brucella neotomae 5K33]
 gi|261749910|ref|ZP_05993619.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 5 str.
           513]
 gi|265986977|ref|ZP_06099534.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M292/94/1]
 gi|265989509|ref|ZP_06102066.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265993392|ref|ZP_06105949.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 3
           str. Ether]
 gi|294853173|ref|ZP_06793845.1| flagellar basal-body rod protein FlgC [Brucella sp. NVSL 07-0026]
 gi|297249956|ref|ZP_06933657.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 5 str.
           B3196]
 gi|17985310|gb|AAL54330.1| flagellar basal-body rod protein flgc [Brucella melitensis bv. 1
           str. 16M]
 gi|62197294|gb|AAX75593.1| FlgC, flagellar basal-body rod rotein FlgC [Brucella abortus bv. 1
           str. 9-941]
 gi|82939367|emb|CAJ12315.1| Flagellar basal body rod protein:Flagellar basal-body rod protein
           FlgC [Brucella melitensis biovar Abortus 2308]
 gi|163675067|gb|ABY39177.1| flagellar basal-body rod protein FlgC [Brucella suis ATCC 23445]
 gi|189020940|gb|ACD73661.1| Flagellar basal body rod protein [Brucella abortus S19]
 gi|225616469|gb|EEH13517.1| flagellar basal-body rod protein FlgC [Brucella ceti str. Cudo]
 gi|225642115|gb|ACO02028.1| flagellar basal-body rod protein FlgC [Brucella melitensis ATCC
           23457]
 gi|237787476|gb|EEP61692.1| flagellar basal-body rod protein FlgC [Brucella abortus str. 2308
           A]
 gi|255997600|gb|ACU49287.1| flagellar basal body rod protein [Brucella microti CCM 4915]
 gi|260097610|gb|EEW81484.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260151944|gb|EEW87037.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260673265|gb|EEX60086.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677136|gb|EEX63957.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 6 str.
           870]
 gi|260872366|gb|EEX79435.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 9 str.
           C68]
 gi|260917264|gb|EEX84125.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 3 str.
           Tulya]
 gi|260918601|gb|EEX85254.1| flagellar basal-body rod protein FlgC [Brucella ceti B1/94]
 gi|260921879|gb|EEX88447.1| flagellar basal-body rod protein FlgC [Brucella ceti M13/05/1]
 gi|261292347|gb|EEX95843.1| flagellar basal-body rod protein FlgC [Brucella ceti M644/93/1]
 gi|261298243|gb|EEY01740.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           B2/94]
 gi|261299559|gb|EEY03056.1| flagellar basal-body rod protein FlgC [Brucella neotomae 5K33]
 gi|261302764|gb|EEY06261.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M163/99/10]
 gi|261739663|gb|EEY27589.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 5 str.
           513]
 gi|262764262|gb|EEZ10294.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 3
           str. Ether]
 gi|263000178|gb|EEZ12868.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263092702|gb|EEZ16911.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|264659174|gb|EEZ29435.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M292/94/1]
 gi|294818828|gb|EFG35828.1| flagellar basal-body rod protein FlgC [Brucella sp. NVSL 07-0026]
 gi|297173825|gb|EFH33189.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 5 str.
           B3196]
 gi|326410333|gb|ADZ67397.1| flagellar basal body rod protein FlgC [Brucella melitensis M28]
 gi|326553625|gb|ADZ88264.1| flagellar basal body rod protein FlgC [Brucella melitensis M5-90]
          Length = 140

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 102/135 (75%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGG 60
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF  E+  G+G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGA 63

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|254731831|ref|ZP_05190409.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 4 str.
           292]
 gi|260759600|ref|ZP_05871948.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 4 str.
           292]
 gi|260669918|gb|EEX56858.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 4 str.
           292]
          Length = 140

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 102/135 (75%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGG 60
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF  E+  G+G 
Sbjct: 4   DALQSTLKIAASGLSTQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGA 63

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|23499914|ref|NP_699354.1| flagellar basal body rod protein FlgC [Brucella suis 1330]
 gi|23463491|gb|AAN33359.1| flagellar basal-body rod protein FlgC [Brucella suis 1330]
          Length = 140

 Score =  157 bits (398), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGG 60
           D L ++  IA SGL+ QS R+ I+SENIANA++T  T  +DPYRRKT+SF  E+  G+G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLCIVSENIANAQSTAKTADTDPYRRKTVSFRTELEQGTGA 63

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|161620234|ref|YP_001594120.1| flagellar basal body rod protein FlgC [Brucella canis ATCC 23365]
 gi|254702574|ref|ZP_05164402.1| flagellar basal body rod protein FlgC [Brucella suis bv. 3 str.
           686]
 gi|260568518|ref|ZP_05838987.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|261753154|ref|ZP_05996863.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 3 str.
           686]
 gi|161337045|gb|ABX63349.1| flagellar basal-body rod protein FlgC [Brucella canis ATCC 23365]
 gi|260155183|gb|EEW90264.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|261742907|gb|EEY30833.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 3 str.
           686]
          Length = 140

 Score =  157 bits (396), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGG 60
           D L ++  IA SGL+ QS R+ I+SENIANA++T  T  +DPYRRKT+SF  E+  G+G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLCIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGA 63

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|90422608|ref|YP_530978.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
 gi|90104622|gb|ABD86659.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
          Length = 139

 Score =  156 bits (395), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 75/136 (55%), Positives = 101/136 (74%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS  IA+SGL  QS R++++SEN+ANA +TG +PG++PY+RKT +F   M  + G
Sbjct: 2   IDPLQASVQIASSGLEAQSTRLRVVSENLANANSTGRSPGAEPYQRKTTTFTAEMDRAAG 61

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   +VK IGVD++ F  ++ PGHP A+ SG VK PNVN+L+E ADMRETNR Y ANLQ 
Sbjct: 62  VPVVKVKDIGVDRAPFRLDYQPGHPAADQSGYVKLPNVNMLIEMADMRETNRTYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  M++ T+DLLR
Sbjct: 122 IKQTRSMVSMTIDLLR 137


>gi|27381986|ref|NP_773515.1| flagellar basal body rod protein FlgC [Bradyrhizobium japonicum
           USDA 110]
 gi|27355156|dbj|BAC52140.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 138

 Score =  155 bits (393), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/136 (54%), Positives = 99/136 (72%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS  +A+SGL  QS RM+I+SEN+ANA +TG T G+DPY+RKTI+F+  M  + G
Sbjct: 2   LDSLSASLTVASSGLEAQSTRMRIVSENLANATSTGRTAGADPYQRKTITFDAAMDRASG 61

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
               +VK++GVD + +  E+DPGHP A+ SG VK PNVN+++E ADMRE NR Y ANLQ 
Sbjct: 62  AQLAKVKEVGVDTTPYRVEYDPGHPAADKSGYVKLPNVNMMIEMADMREVNRSYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ   M+  T+DLLR
Sbjct: 122 VKQVRSMLGMTIDLLR 137


>gi|323139652|ref|ZP_08074694.1| flagellar basal-body rod protein FlgC [Methylocystis sp. ATCC
           49242]
 gi|322395084|gb|EFX97643.1| flagellar basal-body rod protein FlgC [Methylocystis sp. ATCC
           49242]
          Length = 139

 Score =  155 bits (393), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/135 (57%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L AS  +A +GLA QSAR++I+SEN+ANA++TG+TPG+DPY RKTISF   +  + GV
Sbjct: 3   DPLDASLKVAGAGLAAQSARLRIVSENMANAQSTGNTPGADPYVRKTISFANELDRASGV 62

Query: 62  R---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           R   V +IGVD + F  E DPG+P A+A+G VK PNVN+LVE  DMRE NR Y A+LQ +
Sbjct: 63  RLVRVNQIGVDPTPFTIEHDPGNPAADANGDVKRPNVNLLVEMGDMREANRAYEADLQVM 122

Query: 119 KQSHDMMTTTLDLLR 133
           KQS D++  T+DLL+
Sbjct: 123 KQSRDLIAMTVDLLK 137


>gi|163758013|ref|ZP_02165101.1| flagellar basal-body rod protein C [Hoeflea phototrophica DFL-43]
 gi|162284302|gb|EDQ34585.1| flagellar basal-body rod protein C [Hoeflea phototrophica DFL-43]
          Length = 142

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/136 (55%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           +D L  ++ IA+SGL VQ  RM+I+SEN+AN+++TGDTPG+D YRRKTISF   +    G
Sbjct: 4   VDPLSLASRIASSGLDVQETRMRILSENLANSQSTGDTPGADAYRRKTISFSWELDRSIG 63

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +   +V KI  D   F  ++DPG+P AN  G+VK PNVNVLVE ADMRE NR Y ANLQT
Sbjct: 64  ASRAKVAKIDFDPGEFNVQYDPGNPAANEEGMVKLPNVNVLVELADMREANRSYEANLQT 123

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ+ ++++ TLDLLR
Sbjct: 124 VKQTRELVSMTLDLLR 139


>gi|153011526|ref|YP_001372740.1| flagellar basal body rod protein FlgC [Ochrobactrum anthropi ATCC
           49188]
 gi|151563414|gb|ABS16911.1| flagellar basal-body rod protein FlgC [Ochrobactrum anthropi ATCC
           49188]
          Length = 140

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 71/135 (52%), Positives = 102/135 (75%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGG 60
           D L ++  IA SGL+ QS R++I+SENIANA++T +T  +DPYRRKT+SF  E+  G+G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTAETADADPYRRKTVSFRTELEQGTGA 63

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VR+ ++G D S F+E+++P HP A+  G V+YPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRIAEVGKDTSPFIEQYEPSHPAADERGYVRYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           KQ+ ++++ T+DLLR
Sbjct: 124 KQARELISMTIDLLR 138


>gi|217976223|ref|YP_002360370.1| flagellar basal body rod protein FlgC [Methylocella silvestris BL2]
 gi|217501599|gb|ACK49008.1| flagellar basal-body rod protein FlgC [Methylocella silvestris BL2]
          Length = 140

 Score =  155 bits (391), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/136 (55%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS  +A SGL  QSAR++I+SEN+ANA++TG TPG+DPY RKTI+F   +  + G
Sbjct: 2   IDPLEASLRVAGSGLEAQSARLRIVSENLANAQSTGSTPGADPYARKTITFASELDRASG 61

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   RVK IG D++ F  E DPG+P A++ G VK PNVNV++E ADMRE NR Y ANLQ 
Sbjct: 62  VDLVRVKGIGADKAPFRVEQDPGNPAADSKGFVKLPNVNVIMEMADMREANRSYEANLQI 121

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ+ ++ + T+DLLR
Sbjct: 122 VKQTRELSSMTVDLLR 137


>gi|90418393|ref|ZP_01226305.1| flagellar basal-body rod protein flgC [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90338065|gb|EAS51716.1| flagellar basal-body rod protein flgC [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 138

 Score =  155 bits (391), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/135 (56%), Positives = 98/135 (72%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGS 58
           D L++S  IA SGL  QS RM+I+SENIANA+TTG TPGSDPY+RK +SF+  +    G+
Sbjct: 3   DPLLSSLKIAASGLQAQSTRMRIVSENIANAQTTGTTPGSDPYQRKMVSFQSELDRVSGA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V V K+G D + F+ E DPG+P ANA G VK PNV +LVE ADMRE NR Y AN+Q +
Sbjct: 63  QMVSVDKVGRDDTPFILESDPGNPAANADGYVKMPNVRMLVEMADMREANRSYEANIQVV 122

Query: 119 KQSHDMMTTTLDLLR 133
           KQ+ +++  T+DLLR
Sbjct: 123 KQAREIINMTIDLLR 137


>gi|239834444|ref|ZP_04682772.1| flagellar basal-body rod protein FlgC [Ochrobactrum intermedium LMG
           3301]
 gi|239822507|gb|EEQ94076.1| flagellar basal-body rod protein FlgC [Ochrobactrum intermedium LMG
           3301]
          Length = 140

 Score =  154 bits (390), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 71/135 (52%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGG 60
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF  E+  G+G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTAKTADADPYRRKTVSFRTELEQGTGA 63

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VR+ ++G D S F+E+++P HP A+  G V+YPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRIAEVGKDTSPFIEQYEPSHPAADERGYVRYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           KQ+ ++++ T+DLLR
Sbjct: 124 KQARELISMTIDLLR 138


>gi|256158120|ref|ZP_05456038.1| flagellar basal body rod protein FlgC [Brucella ceti M490/95/1]
 gi|265996637|ref|ZP_06109194.1| flagellar basal-body rod protein FlgC [Brucella ceti M490/95/1]
 gi|262550934|gb|EEZ07095.1| flagellar basal-body rod protein FlgC [Brucella ceti M490/95/1]
          Length = 140

 Score =  154 bits (390), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 73/135 (54%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGG 60
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF  E+  G+G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGA 63

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+ ++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIGQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|319409189|emb|CBI82833.1| Flagellar basal-body rod protein flgC [Bartonella schoenbuchensis
           R1]
          Length = 137

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 69/135 (51%), Positives = 102/135 (75%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D LIA+  +A +GL+ QS R++II+EN+ANA +TG +PG+ PYRRKT+SFE  ++    +
Sbjct: 3   DRLIAAEQVATTGLSAQSMRLRIIAENLANANSTGKSPGASPYRRKTVSFEAALNPHSDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV+V +IG D++ F+  ++PGH  A+++G VKYPNVN +VE ADMRE NR Y ANLQ +
Sbjct: 63  QGVQVTRIGNDKAPFIMRYEPGHLAADSNGYVKYPNVNSIVEMADMREANRSYEANLQVV 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q  D+++ T+DLL+
Sbjct: 123 RQVRDLVSQTIDLLK 137


>gi|170748109|ref|YP_001754369.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654631|gb|ACB23686.1| flagellar basal-body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
          Length = 138

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/136 (53%), Positives = 99/136 (72%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HG 57
           +D L AS+ IA SG+  QS R+++I+ENIANAR+TG T GSDPY RKTI+F   +    G
Sbjct: 2   IDPLAASSRIAGSGMEAQSERLRVIAENIANARSTGQTAGSDPYTRKTITFRTALDRASG 61

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V +++IG D++ F  E+DPG+P A+A G VK PNVN+L+E ADMRE NR Y ANLQ 
Sbjct: 62  TAAVAIRQIGEDKAPFRVEYDPGNPAADADGNVKLPNVNMLIEMADMREANRSYEANLQM 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  M+ + ++LLR
Sbjct: 122 IKQTRAMVASIIELLR 137


>gi|254473329|ref|ZP_05086726.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
 gi|211957445|gb|EEA92648.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
          Length = 139

 Score =  151 bits (381), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 74/136 (54%), Positives = 101/136 (74%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           +D L+AS  I++SGL VQS RM+I+SEN+AN ++TGDTPG++PY+RKTI+F+  +    G
Sbjct: 2   IDPLVASLKISSSGLRVQSQRMRIVSENLANVQSTGDTPGANPYQRKTITFKSEVDRALG 61

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V VK IG D+  +  EFDP HP A+ +G VKYPNVN L+E ADMRE +R Y A LQ 
Sbjct: 62  ANLVAVKNIGSDKGDYRVEFDPSHPAADENGNVKYPNVNTLIELADMREASRSYEAGLQM 121

Query: 118 IKQSHDMMTTTLDLLR 133
           + +S +M+T T+DLLR
Sbjct: 122 MVKSREMITRTIDLLR 137


>gi|319403959|emb|CBI77547.1| Flagellar basal-body rod protein flgC [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 138

 Score =  150 bits (378), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 67/135 (49%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D LIA+  IA +GL+ QS R+++I+EN+ANA +TG +PG+ PY+RKT+SFE  ++    +
Sbjct: 3   DRLIAAEQIATTGLSAQSTRLRVIAENLANANSTGKSPGARPYQRKTVSFEATLNPYLDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV V +I  D++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVTRISTDKAPFIMRYEPGHLAADSNGYVKYPNVNSIIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ D+++ T+DLL+
Sbjct: 123 RQARDLISQTIDLLK 137


>gi|319406974|emb|CBI80611.1| Flagellar basal-body rod protein flgC [Bartonella sp. 1-1C]
          Length = 138

 Score =  150 bits (378), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 67/135 (49%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D LIA+  IA +GL+ QS R+++I+EN+ANA +TG +PG+ PY+RKT+SFE  ++    +
Sbjct: 3   DRLIAAEQIATTGLSAQSTRLRVIAENLANANSTGKSPGARPYQRKTVSFEATLNPYIDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV V +I  D++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVTRISTDKAPFIMRYEPGHLAADSNGYVKYPNVNSIIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ D+++ T+DLL+
Sbjct: 123 RQARDLISQTIDLLK 137


>gi|121602485|ref|YP_989402.1| flagellar basal body rod protein FlgC [Bartonella bacilliformis
           KC583]
 gi|120614662|gb|ABM45263.1| flagellar basal-body rod protein FlgC [Bartonella bacilliformis
           KC583]
          Length = 137

 Score =  150 bits (378), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 68/135 (50%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L+ +  ++ +GL  QS R++II+EN+ANA +TG  PG+ PYRRKT+SFE  ++    +
Sbjct: 3   DPLMIAERVSTTGLGAQSTRLRIIAENLANANSTGRAPGAAPYRRKTVSFETALNPYVDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV VK+IGVD++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVKRIGVDKAPFIMRYEPGHLAADSNGYVKYPNVNAVIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q  D+++ T+DLL+
Sbjct: 123 RQVRDLVSQTIDLLK 137


>gi|260466621|ref|ZP_05812809.1| flagellar basal-body rod protein FlgC [Mesorhizobium opportunistum
           WSM2075]
 gi|259029627|gb|EEW30915.1| flagellar basal-body rod protein FlgC [Mesorhizobium opportunistum
           WSM2075]
          Length = 138

 Score =  149 bits (377), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 74/137 (54%), Positives = 95/137 (69%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HG 57
           MD L A+  +A SGL  QS R++++SEN+ANA++TG TPGSDPYRRKTISF   +    G
Sbjct: 1   MDALTAALKVAASGLGAQSERLRVVSENLANAQSTGTTPGSDPYRRKTISFVSELDRASG 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           S  V V  I  D S F  EF PG+  A+  G VK PNVNVL+E ADM E NR Y ANLQ 
Sbjct: 61  SSTVEVNSIDRDPSDFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEANRSYEANLQV 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           +KQ+ D+++ T+DL+R+
Sbjct: 121 VKQARDLISMTIDLMRN 137


>gi|319898635|ref|YP_004158728.1| flagellar basal-body rod protein flgC [Bartonella clarridgeiae 73]
 gi|319402599|emb|CBI76144.1| Flagellar basal-body rod protein flgC [Bartonella clarridgeiae 73]
          Length = 138

 Score =  149 bits (377), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 68/135 (50%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D LIA+  IA +GL+ QS R++II+EN+ANA +TG + G+ PY+RKT+SFE  ++    +
Sbjct: 3   DRLIAAEQIATTGLSAQSTRLRIIAENLANANSTGKSAGARPYQRKTVSFEATLNPYIDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV VK+I  D++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVKRISTDKAPFIMRYEPGHLAADSNGYVKYPNVNSIIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ D+++ T+DLL+
Sbjct: 123 RQARDLVSQTIDLLK 137


>gi|300024608|ref|YP_003757219.1| flagellar basal-body rod protein FlgC [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526429|gb|ADJ24898.1| flagellar basal-body rod protein FlgC [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 139

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
           D LIAS   A SGL  QS+RM+++SENIANA TTG TPG+DPY+RKTISF+ VM  + G 
Sbjct: 3   DPLIASTRSAASGLFAQSSRMRVVSENIANASTTGKTPGADPYQRKTISFQSVMDENAGA 62

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+V KI  D++ F  ++ PG+  A+++G+VK PNVN+LVE ADMRE +R Y AN Q I
Sbjct: 63  DLVQVDKISHDETPFETQYMPGNAAADSNGMVKMPNVNMLVELADMREASRSYTANTQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           KQ  ++++ T+DL+R
Sbjct: 123 KQVRELVSMTIDLMR 137


>gi|170741834|ref|YP_001770489.1| flagellar basal body rod protein FlgC [Methylobacterium sp. 4-46]
 gi|168196108|gb|ACA18055.1| flagellar basal-body rod protein FlgC [Methylobacterium sp. 4-46]
          Length = 138

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/136 (52%), Positives = 102/136 (75%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           +D L ASA +A++G+ VQS R+++++ENIANA++TG  PGSDPY+RKTI+F   +    G
Sbjct: 2   IDPLTASARLASAGMEVQSLRLRVVAENIANAQSTGVDPGSDPYQRKTITFRSELDRAAG 61

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V V++IGVD++ F  E +PG+P A+ +G VKYPNVNVL+E  DMRE NR Y ANLQ 
Sbjct: 62  AATVGVREIGVDRAPFRVEHEPGNPAADENGDVKYPNVNVLIEMTDMREANRSYEANLQM 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  ++ + +DLL+
Sbjct: 122 IKQARALVASVIDLLK 137


>gi|13472574|ref|NP_104141.1| flagellar basal body rod protein FlgC [Mesorhizobium loti
           MAFF303099]
 gi|14023320|dbj|BAB49927.1| flagellar basal-body rod protein; FlgC [Mesorhizobium loti
           MAFF303099]
          Length = 138

 Score =  148 bits (374), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/137 (54%), Positives = 96/137 (70%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSG 59
           MD L A+  +A SGL  QS R++++SEN+ANA++TG TPG+DPYRRKTISF  E+   SG
Sbjct: 1   MDALTAALKVAASGLGAQSERLRVVSENLANAQSTGTTPGADPYRRKTISFVSELDRASG 60

Query: 60  G--VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V  I  D S F  EF PG+  A+  G VK PNVNVL+E ADM E NR Y ANLQ 
Sbjct: 61  ASTVEVNSIDRDPSVFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEANRSYEANLQV 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           +KQ+ D+++ T+DL+R+
Sbjct: 121 VKQARDLISMTIDLMRN 137


>gi|114706769|ref|ZP_01439669.1| flagellar basal-body rod protein C [Fulvimarina pelagi HTCC2506]
 gi|114537717|gb|EAU40841.1| flagellar basal-body rod protein C [Fulvimarina pelagi HTCC2506]
          Length = 138

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/135 (51%), Positives = 96/135 (71%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L++S  IA SG+  QS R++++SEN+ANA TTGDTPG+DPY RKT++F   +    G+
Sbjct: 3   DPLVSSLKIAASGMEAQSTRLRVVSENVANAETTGDTPGADPYVRKTVTFGATLDEVTGA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV  IG D++ F   +DPG+P A+ +G VK PNVN+L E  DMRE NR Y AN+Q I
Sbjct: 63  NLVRVTDIGTDKADFESTYDPGNPAADENGYVKRPNVNMLTEMMDMREANRSYEANIQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           KQ+ +++  T+DLLR
Sbjct: 123 KQAREIINMTIDLLR 137


>gi|254504860|ref|ZP_05117011.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
 gi|222440931|gb|EEE47610.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
          Length = 138

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/136 (54%), Positives = 95/136 (69%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L A+  IA SGL  QS RM+I+SEN+ANAR+TG+  G DPYRRKTI+FE   +    +
Sbjct: 3   DPLSATLQIAASGLKAQSDRMRIVSENLANARSTGEASGDDPYRRKTITFESEFNRVTQA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V VK IG D++ F  E+DPGHP A+  G VK PNVN L+E ADMRETNR Y ANL+ +
Sbjct: 63  NLVAVKGIGTDKAPFTVEYDPGHPAADVDGYVKMPNVNTLMELADMRETNRTYEANLKVM 122

Query: 119 KQSHDMMTTTLDLLRD 134
            Q+ +M+   +DLLR+
Sbjct: 123 TQAREMVMRHIDLLRN 138


>gi|110632658|ref|YP_672866.1| flagellar basal body rod protein FlgC [Mesorhizobium sp. BNC1]
 gi|110283642|gb|ABG61701.1| flagellar basal-body rod protein FlgC [Chelativorans sp. BNC1]
          Length = 139

 Score =  147 bits (372), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 75/136 (55%), Positives = 96/136 (70%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSG 59
           MD L  +  IA SGLA QS RM+++SEN+ANA++T + PG DPYRRKTISF  E+  G+G
Sbjct: 1   MDPLSTAVKIAGSGLAAQSERMRVVSENLANAQSTSEVPGGDPYRRKTISFAAELGRGNG 60

Query: 60  G--VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           G  V V  I  D + F  E+ PGH  A+  G VK PNVN+LVE ADMRE NR Y ANLQ 
Sbjct: 61  GAMVEVSAIARDPAEFPVEYMPGHEAADEFGYVKMPNVNMLVEMADMREANRGYEANLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ+ ++++ T+DLLR
Sbjct: 121 VKQARELISMTIDLLR 136


>gi|328545507|ref|YP_004305616.1| flagellar basal-body rod protein FlgC [polymorphum gilvum
           SL003B-26A1]
 gi|326415248|gb|ADZ72311.1| Flagellar basal-body rod protein FlgC [Polymorphum gilvum
           SL003B-26A1]
          Length = 138

 Score =  147 bits (372), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 72/137 (52%), Positives = 97/137 (70%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           +D L A+  I+ SGL  QS R++++SEN+ANA++TG T G+DPY RKTI+FE        
Sbjct: 2   VDPLAATLKISASGLQAQSERLRVVSENLANAQSTGKTKGADPYARKTITFESEFDRATA 61

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V+VK IG D++ F  E+DPGHP A+  G VK PNVN+LVE ADMRETNR Y ANL+ 
Sbjct: 62  ASMVKVKDIGKDKAPFTIEYDPGHPAADDDGYVKLPNVNLLVEMADMRETNRSYEANLKM 121

Query: 118 IKQSHDMMTTTLDLLRD 134
           + Q+  M+  T+DLL+D
Sbjct: 122 MTQARTMVMRTIDLLKD 138


>gi|319781683|ref|YP_004141159.1| flagellar basal-body rod protein FlgC [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167571|gb|ADV11109.1| flagellar basal-body rod protein FlgC [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 138

 Score =  147 bits (371), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HG 57
           MD L A+  +A SGL  QS R++++SEN+ANA++TG  PGSDPYRRKTISF   +    G
Sbjct: 1   MDALTAALKVAASGLGAQSERLRVVSENLANAQSTGTAPGSDPYRRKTISFVSELDRASG 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           S  V V  I  D S F  EF PG+  A+  G VK PNVNVL+E ADM E NR Y ANLQ 
Sbjct: 61  SSTVAVNSIDRDPSDFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEANRSYEANLQV 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           +KQ+ D+++ T+DL+R+
Sbjct: 121 VKQARDLISMTIDLMRN 137


>gi|182680550|ref|YP_001834696.1| flagellar basal body rod protein FlgC [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636433|gb|ACB97207.1| flagellar basal-body rod protein FlgC [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 138

 Score =  147 bits (371), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 72/136 (52%), Positives = 95/136 (69%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS  IA SGL  QS R+++ISEN+AN+ +TG T G++PY+RKT++F   M    G
Sbjct: 2   IDPLKASMKIAGSGLEAQSTRLRVISENMANSESTGTTAGANPYQRKTVTFSSEMDRLSG 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V++K IG D + F  E DPG+P A+  G VK PNVN+L+E ADMRE NR Y ANLQ 
Sbjct: 62  LDLVQIKSIGKDTTPFQREHDPGNPAADDKGFVKRPNVNILIEMADMREANRSYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ+ D+ T T+DLLR
Sbjct: 122 LKQARDLSTMTIDLLR 137


>gi|304392508|ref|ZP_07374448.1| flagellar basal-body rod protein FlgC [Ahrensia sp. R2A130]
 gi|303295138|gb|EFL89498.1| flagellar basal-body rod protein FlgC [Ahrensia sp. R2A130]
          Length = 138

 Score =  147 bits (371), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 71/136 (52%), Positives = 96/136 (70%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  +A+SGLA QS R++++S+NIANA++T    G +PY+RKTI+F   +  +  
Sbjct: 1   MDALSAAMKVASSGLAAQSQRLEVVSQNIANAQSTSRVAGGEPYQRKTITFTSALDQANA 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V KIG D S+F  +FDP  P A+A G+VK PNVNVLVE ADMR+ NR Y +NLQ 
Sbjct: 61  AQMVDVDKIGRDPSSFSAKFDPSSPGADAKGMVKMPNVNVLVEMADMRDANRAYESNLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ  DM+T T+DL+R
Sbjct: 121 MKQVQDMVTATIDLMR 136


>gi|319405399|emb|CBI79018.1| Flagellar basal-body rod protein flgC [Bartonella sp. AR 15-3]
          Length = 138

 Score =  146 bits (369), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 65/135 (48%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D LIA+  IA +GL+ QS R+++I+EN+AN  +TG + G+ PY+RKT+SFE +++    +
Sbjct: 3   DLLIAAEQIATTGLSAQSTRLRVIAENLANVNSTGKSAGARPYQRKTVSFEAILNPYLDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV V +I  D++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVTRISTDKAPFIMRYEPGHLAADSNGYVKYPNVNSIIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ D+++ T+DLL+
Sbjct: 123 RQARDLVSQTIDLLK 137


>gi|188579865|ref|YP_001923310.1| flagellar basal body rod protein FlgC [Methylobacterium populi
           BJ001]
 gi|179343363|gb|ACB78775.1| flagellar basal-body rod protein FlgC [Methylobacterium populi
           BJ001]
          Length = 138

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/136 (49%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L++++ +A++GL  QS RM+++SEN+ANA++TG +PG+DPY RKT++F   +  + G
Sbjct: 2   IDPLLSASRLASAGLEAQSLRMRVVSENLANAQSTGASPGADPYARKTVTFRAELDRAAG 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              VR+++IG D + F  E DP +P A+ +G VK PNVN+LVE ADMRE NR Y ANLQ 
Sbjct: 62  IASVRLREIGTDDAPFRTEHDPANPAADENGNVKLPNVNMLVEMADMREANRSYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  M+ + +DLL+
Sbjct: 122 IKQARAMVASVIDLLK 137


>gi|118589983|ref|ZP_01547387.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
 gi|118437480|gb|EAV44117.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
          Length = 138

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 70/136 (51%), Positives = 95/136 (69%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L A+  I+ +GL  QS R++++SEN+ANAR+TG+  G DPYRRKTI+FE        +
Sbjct: 3   DPLSATLQISGAGLRAQSERLRVVSENLANARSTGEAAGDDPYRRKTITFESEFSRAVQA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V VK IG D++ F  E+DPGHP A+ +G VK PNVN L+E ADMRETNR Y ANL+ +
Sbjct: 63  NLVSVKGIGEDKAEFAVEYDPGHPAADENGYVKMPNVNTLLELADMRETNRSYEANLKVM 122

Query: 119 KQSHDMMTTTLDLLRD 134
            Q+ +M+   +DLLR+
Sbjct: 123 TQAREMVMRNIDLLRN 138


>gi|296447440|ref|ZP_06889365.1| flagellar basal-body rod protein FlgC [Methylosinus trichosporium
           OB3b]
 gi|296255060|gb|EFH02162.1| flagellar basal-body rod protein FlgC [Methylosinus trichosporium
           OB3b]
          Length = 139

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/136 (52%), Positives = 97/136 (71%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSG 59
           MD L AS  IA SGL+ QSAR+++++EN+ANA++   T G  PY RKTISF+ EV   SG
Sbjct: 1   MDPLQASMKIAGSGLSAQSARLRVVAENMANAQSVAKTAGGAPYSRKTISFQSEVDRASG 60

Query: 60  G--VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V  IGVD++ F  E DPG+P A+  G VKYPNVN++ E ADMRE NR Y AN+Q 
Sbjct: 61  ASLVQVGPIGVDRAPFRVEHDPGNPAADTDGYVKYPNVNLMTEVADMREANRSYEANVQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ+ ++ + T+DLL+
Sbjct: 121 MKQTRELFSMTIDLLK 136


>gi|209963543|ref|YP_002296458.1| flagellar basal-body rod protein FlgC, putative [Rhodospirillum
           centenum SW]
 gi|209957009|gb|ACI97645.1| flagellar basal-body rod protein FlgC, putative [Rhodospirillum
           centenum SW]
          Length = 137

 Score =  143 bits (361), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 70/136 (51%), Positives = 94/136 (69%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD L +S  IA SG+  Q+ R+++++EN+ANA +TG+TPG+DPYRRKTI F+ V+  +  
Sbjct: 1   MDPLASSFGIAASGMKAQATRLRVVAENMANASSTGETPGADPYRRKTIVFDSVLDRALR 60

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              VRVK IG D S F   ++PGHP A+A G VK PNVN LVE  DMRE  R Y ANL  
Sbjct: 61  ADTVRVKTIGRDSSDFRLSYEPGHPAADAKGYVKLPNVNTLVEMMDMREAGRSYEANLNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           ++Q+  M+  T+D+LR
Sbjct: 121 LQQARGMLGRTIDMLR 136


>gi|163744319|ref|ZP_02151679.1| flagellar basal body rod protein [Oceanibulbus indolifex HEL-45]
 gi|161381137|gb|EDQ05546.1| flagellar basal body rod protein [Oceanibulbus indolifex HEL-45]
          Length = 136

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/136 (49%), Positives = 94/136 (69%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L + A IA SG+  Q+AR+++ISEN+ANA +TG TPG+DP+RRKTISF E++  +GG
Sbjct: 1   MDPLQSIAKIAASGMTAQTARLRVISENVANADSTGTTPGADPFRRKTISFSELIDRNGG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V +IG DQS F  ++DP HP A+ +G V  PNV+ ++E A+MRE +R Y AN+  
Sbjct: 61  GSLVEVDRIGRDQSPFRRDYDPAHPAADETGYVNRPNVDPIIEMANMREASRNYEANMNM 120

Query: 118 IKQSHDMMTTTLDLLR 133
            +    M +  LDLL+
Sbjct: 121 FESGRRMRSQMLDLLK 136


>gi|163850061|ref|YP_001638104.1| flagellar basal body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218528664|ref|YP_002419480.1| flagellar basal body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240137195|ref|YP_002961664.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254559207|ref|YP_003066302.1| cell-proximal portion of basal-body rod biosynthesis protein
           [Methylobacterium extorquens DM4]
 gi|163661666|gb|ABY29033.1| flagellar basal-body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218520967|gb|ACK81552.1| flagellar basal-body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240007161|gb|ACS38387.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254266485|emb|CAX22249.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Methylobacterium extorquens DM4]
          Length = 138

 Score =  137 bits (345), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L++++ +A++GL  QS RM+++SEN+ANA++TG TPG+DPY RKT++F   +  + G
Sbjct: 2   IDPLLSASRLASAGLEAQSLRMRVVSENLANAQSTGATPGADPYARKTVTFRAELDRAAG 61

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   R+++IG D + F  E DP +  A+A+G VK PNVN+LVE ADMRE NR Y ANLQ 
Sbjct: 62  VASVRLREIGTDNAPFRTEHDPANAAADANGNVKLPNVNMLVEMADMREANRSYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  M+ + +DLL+
Sbjct: 122 IKQARAMVASVIDLLK 137


>gi|115523177|ref|YP_780088.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
 gi|115517124|gb|ABJ05108.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
          Length = 138

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/136 (53%), Positives = 98/136 (72%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HG 57
           +D L AS  IA+SGL VQS R++++SEN+ANA +TG  PG++PYRRKT +F   M    G
Sbjct: 2   IDPLQASIQIASSGLEVQSTRLRVVSENLANANSTGRAPGAEPYRRKTTTFAAEMDRAQG 61

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+VK +GVD++ F  E++P HP A+  G VK PNVN L+E ADMRETNR Y ANLQ 
Sbjct: 62  VRVVKVKDVGVDRTPFRVEYEPSHPAADQDGYVKLPNVNTLIEMADMRETNRSYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ+  M++ T+D+LR
Sbjct: 122 VKQARSMVSMTIDMLR 137


>gi|23008564|ref|ZP_00049957.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 118

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/116 (52%), Positives = 87/116 (75%), Gaps = 3/116 (2%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---VRVKKIGVDQSTFVEEF 77
           RM+++SEN+ANA++TG TPG+DPY RKT++F+  +  + G   VR+++IG D++ F  E 
Sbjct: 2   RMRVVSENLANAQSTGATPGADPYSRKTVTFQAALDRAAGIASVRLREIGTDKTPFRTEH 61

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           DP +P A+ +G VK PNVN+LVE ADMRE NR Y ANLQ IKQ+  M+ + +DLL+
Sbjct: 62  DPANPAADENGNVKLPNVNMLVEMADMREANRSYEANLQVIKQARAMVASVIDLLK 117


>gi|288962707|ref|YP_003453001.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288914973|dbj|BAI76457.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 139

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/135 (50%), Positives = 89/135 (65%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L A+  IA +GL  QS R+++++EN+ANA +T    G DPYRRKT+SF+ VM    G+
Sbjct: 4   DVLGATLKIAGAGLQAQSTRLRVVAENLANADSTATAKGGDPYRRKTVSFDSVMDRGVGA 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRVK+IG D+S F   +DP HP A+  G VK PNV  LVE  DMRE  R + A++  I
Sbjct: 64  ELVRVKQIGRDRSDFQLAYDPSHPAADDKGYVKKPNVQPLVEMMDMREAGRAFEASMNVI 123

Query: 119 KQSHDMMTTTLDLLR 133
           +QS  MMT  +DLLR
Sbjct: 124 EQSRAMMTRVVDLLR 138


>gi|254470324|ref|ZP_05083728.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
 gi|211960635|gb|EEA95831.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
          Length = 136

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/136 (50%), Positives = 84/136 (61%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+ I S  IA SGL  Q+ RM++I+ENIANA +TG TPG DPYRRK  +F         
Sbjct: 1   MDF-IKSMFIAASGLKAQTGRMRVIAENIANADSTGQTPGEDPYRRKVPTFSSSFDAKVE 59

Query: 61  VRVKKIG---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             + K+G    D+S F   ++P HP AN  G VK PNVN LVE ADM+E  R Y ANL  
Sbjct: 60  AELVKLGRVREDKSEFKLRYEPDHPAANDKGYVKMPNVNTLVEMADMQEATRSYEANLNV 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +K S  MM  TLD+LR
Sbjct: 120 VKSSRSMMQKTLDILR 135


>gi|197104391|ref|YP_002129768.1| flagellar basal-body rod protein FlgC [Phenylobacterium zucineum
           HLK1]
 gi|196477811|gb|ACG77339.1| flagellar basal-body rod protein FlgC [Phenylobacterium zucineum
           HLK1]
          Length = 138

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 2/126 (1%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--EVMHGSGGVRVKKIG 67
           IA S L  Q ARM+II+EN+ANA +T   PG DPYRR+   FE   V   + GVR+ ++ 
Sbjct: 12  IAASALRAQQARMRIIAENLANANSTAKVPGGDPYRRQAPVFEPTRVAGAAQGVRMSRVE 71

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            DQS F  E+DPGHP A+  G VK PNVN LVE  DMRE  R Y ANL  I+ +  M T 
Sbjct: 72  PDQSAFRMEYDPGHPSADDRGYVKLPNVNSLVEAMDMREAQRAYEANLNVIETARAMETR 131

Query: 128 TLDLLR 133
           TLDLL+
Sbjct: 132 TLDLLK 137


>gi|209964219|ref|YP_002297134.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
 gi|209957685|gb|ACI98321.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
          Length = 136

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 89/133 (66%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGG 60
           L+ +  ++ +GL VQ  R+++I+EN+ANA +T  TPG  PYRRK + F+ V++   G   
Sbjct: 3   LMNTLSLSAAGLKVQGTRLRVIAENLANANSTAPTPGDLPYRRKVVLFQNVLNRELGMPT 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+VKKI VD+S F   +DPGHP A+A G V  PNVN LVE+ DMRE  R Y ANL  I  
Sbjct: 63  VKVKKIDVDRSDFQRRYDPGHPSADAEGYVLTPNVNSLVESMDMREAQRSYEANLNVIDT 122

Query: 121 SHDMMTTTLDLLR 133
           +  M+T T++LLR
Sbjct: 123 TRQMLTRTIELLR 135


>gi|312115251|ref|YP_004012847.1| flagellar basal-body rod protein FlgC [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311220380|gb|ADP71748.1| flagellar basal-body rod protein FlgC [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 139

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 91/136 (66%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L AS  IA SGL+ QS R+++ +EN+AN+ +TG TPG+ PY RK +SF++ +  + G
Sbjct: 3   MDNLSASLAIAGSGLSAQSQRIRVATENLANSESTGKTPGALPYTRKILSFDQELDAATG 62

Query: 61  VRVKKIG---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             +  IG    D+S +  E  PGHP A+A G VK PNVNVLVE AD+RE  R Y ANLQ 
Sbjct: 63  AELVIIGDVDADRSPYRIENIPGHPAADAQGNVKLPNVNVLVELADIREGTRSYEANLQV 122

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ   + T T+D+L+
Sbjct: 123 IKQVRHLETLTIDILK 138


>gi|23016761|ref|ZP_00056514.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 138

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/136 (47%), Positives = 87/136 (63%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           MD L+ S+ IA SGL VQS R+++ISEN+ANA +   TP   PY+RKT++F+  +    G
Sbjct: 3   MDPLMNSSKIAKSGLKVQSQRLRVISENLANADSLAQTPEGLPYQRKTVTFKNELDREMG 62

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V+V K+  D + F   +DP HP A+  G V  PNVN L+E  DMRE  R Y ANLQ 
Sbjct: 63  TKLVKVDKVRPDNAEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREAQRSYEANLQV 122

Query: 118 IKQSHDMMTTTLDLLR 133
           I+ S  MM  T+DLL+
Sbjct: 123 IQTSRTMMDRTMDLLK 138


>gi|288958048|ref|YP_003448389.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288910356|dbj|BAI71845.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 136

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 84/133 (63%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L  S  ++ SG+  Q  R+++ISEN+ANA TT +TPG  PYRRKT+ F+  +  +     
Sbjct: 3   LYKSMAVSASGMKAQGTRLKVISENLANASTTAETPGDLPYRRKTVVFKNELDRAMDVDK 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV K+ VD+S F   +DP HP A+A G V  PNVN +VE  DMRE  R Y ANL  I  
Sbjct: 63  VRVAKVDVDKSDFQRRYDPSHPSADADGYVLMPNVNSVVEAMDMREAQRSYEANLSAIDT 122

Query: 121 SHDMMTTTLDLLR 133
           +  M+T T+D+LR
Sbjct: 123 ARQMLTRTIDILR 135


>gi|148261124|ref|YP_001235251.1| flagellar basal body rod protein FlgC [Acidiphilium cryptum JF-5]
 gi|326404525|ref|YP_004284607.1| flagellar basal-body rod protein FlgC [Acidiphilium multivorum
           AIU301]
 gi|146402805|gb|ABQ31332.1| flagellar basal-body rod protein FlgC [Acidiphilium cryptum JF-5]
 gi|325051387|dbj|BAJ81725.1| flagellar basal-body rod protein FlgC [Acidiphilium multivorum
           AIU301]
          Length = 134

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/126 (50%), Positives = 86/126 (68%), Gaps = 3/126 (2%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---VRVKKI 66
           I  +GL+ Q AR+Q+I++N+ANA +TG TPGS+PY+RKTISF++V   + G   V+V  I
Sbjct: 9   ITAAGLSAQDARLQVIAQNLANADSTGSTPGSNPYQRKTISFQDVFSQTTGTDLVQVANI 68

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G D + F  ++DP +P ANA G VK PNVN LVE  DM++  R Y ANL  +  +  MMT
Sbjct: 69  GKDTAPFPMKYDPSNPAANAQGYVKLPNVNSLVELMDMQQAERSYDANLSVMNATRGMMT 128

Query: 127 TTLDLL 132
            TL L+
Sbjct: 129 RTLGLI 134


>gi|218506433|ref|ZP_03504311.1| flagellar basal body rod protein FlgC [Rhizobium etli Brasil 5]
          Length = 102

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/102 (63%), Positives = 78/102 (76%), Gaps = 3/102 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-HGSG 59
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M H SG
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDHVSG 60

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
              V VKK+GVD+  F  EFDP +P A+A G+VK PNVNVLV
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADARGVVKLPNVNVLV 102


>gi|296534150|ref|ZP_06896646.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
 gi|296265526|gb|EFH11655.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
          Length = 136

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 87/127 (68%), Gaps = 3/127 (2%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRVKKI 66
           ++ SG++ QSAR+++++EN+AN  +TG+TPG++PYRRKT++F   +    G+  VRV +I
Sbjct: 9   VSASGMSAQSARLRVVAENVANRDSTGETPGAEPYRRKTVTFANRLDRALGAETVRVARI 68

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G     F E++DP HP A+A G V+ PNV+ +VE  DMRE  R Y ANL  ++ +  M+ 
Sbjct: 69  GTAAGNFPEQYDPQHPAADARGYVRKPNVDSMVEMMDMREAQRSYSANLSVLETTRAMIQ 128

Query: 127 TTLDLLR 133
             +DLLR
Sbjct: 129 RAIDLLR 135


>gi|90423029|ref|YP_531399.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
 gi|90105043|gb|ABD87080.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
          Length = 141

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 65/130 (50%), Positives = 84/130 (64%), Gaps = 3/130 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           S  IA SGL  Q+ARM++ISENIANA +T  TPG DPYRRK  +F   +  +   RV  +
Sbjct: 11  SMGIATSGLRAQAARMRVISENIANAESTAQTPGGDPYRRKVPTFTSALDRALDARVVTL 70

Query: 67  G---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           G    D S F  +++PG+P A+A+G VKYPNVN LVE  DMR+  R Y ANL  I  +  
Sbjct: 71  GRVKPDNSNFRVKYEPGNPAADAAGNVKYPNVNPLVEMTDMRDAQRSYEANLNIISATRR 130

Query: 124 MMTTTLDLLR 133
           M+  TLD+L+
Sbjct: 131 MIQRTLDILK 140


>gi|16125206|ref|NP_419770.1| flagellar basal body rod protein FlgC [Caulobacter crescentus CB15]
 gi|221233942|ref|YP_002516378.1| flagellar basal body rod protein FlgC [Caulobacter crescentus
           NA1000]
 gi|13422230|gb|AAK22938.1| flagellar basal-body rod protein FlgC [Caulobacter crescentus CB15]
 gi|220963114|gb|ACL94470.1| flagellar basal-body rod protein flgC [Caulobacter crescentus
           NA1000]
          Length = 139

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 86/130 (66%), Gaps = 1/130 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSGGVRV 63
           +A+  +A+S L  Q  RM++I+ENIANA +T  T G DPYRR+   F+   + G  GV++
Sbjct: 9   LATMAVASSALRAQQGRMRVIAENIANAHSTARTAGGDPYRRQVPVFKPTTVQGGEGVQM 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            ++  DQS F  E+DPG+P A+A G VK PNVN +VE+ DM+E  R Y ANL  I+ +  
Sbjct: 69  LRVDPDQSAFKTEYDPGNPAADAKGYVKLPNVNTMVESLDMKEAQRAYEANLNVIETARS 128

Query: 124 MMTTTLDLLR 133
           M + TLD+L+
Sbjct: 129 MQSRTLDILK 138


>gi|307945654|ref|ZP_07660990.1| flagellar basal-body rod protein FlgC [Roseibium sp. TrichSKD4]
 gi|307771527|gb|EFO30752.1| flagellar basal-body rod protein FlgC [Roseibium sp. TrichSKD4]
          Length = 136

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/135 (47%), Positives = 84/135 (62%), Gaps = 7/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           LI S  +A SGL  Q+ RM++I+ENIANA +T  TP  +PYRR+  +F+   H S     
Sbjct: 3   LIKSLFVAASGLKAQNGRMRVIAENIANANSTAKTPDGEPYRRRVPTFQS--HFSKELNA 60

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V + K+  D+S F E + PGHP AN  G V  PNVN L+ETADMRE  R Y ANL  I
Sbjct: 61  EVVELGKVAEDKSAFKERYQPGHPAANEQGYVLEPNVNTLIETADMREAQRSYEANLNVI 120

Query: 119 KQSHDMMTTTLDLLR 133
           + S  M+  T+D+L+
Sbjct: 121 QSSRRMLQRTIDILK 135


>gi|154253013|ref|YP_001413837.1| flagellar basal body rod protein FlgC [Parvibaculum lavamentivorans
           DS-1]
 gi|154156963|gb|ABS64180.1| flagellar basal-body rod protein FlgC [Parvibaculum lavamentivorans
           DS-1]
          Length = 139

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 86/133 (64%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           LI S  +A SGL  QS RM++I+ENIANA +T    G DPYRRK ++FE+ ++   G   
Sbjct: 6   LIKSMMVAASGLKAQSGRMRVIAENIANADSTSRVAGGDPYRRKIVTFEDKLNREIGANT 65

Query: 64  KKIG---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +G   +D++ F  ++ PGHP A+ +G VK PNVN +VE  DMRE  R Y ANL  I+ 
Sbjct: 66  VSLGRPVLDKTEFQLKYMPGHPAADEAGYVKMPNVNGMVEAMDMREAQRSYEANLNLIQA 125

Query: 121 SHDMMTTTLDLLR 133
           S  M++ T+D+LR
Sbjct: 126 SRRMISQTIDILR 138


>gi|85716543|ref|ZP_01047513.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
 gi|85696544|gb|EAQ34432.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
          Length = 141

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
            + S  IA SGL  Q+ RM++ISENIAN  +T  TPG DPYRRK  +F   +  +   RV
Sbjct: 8   FMRSMSIATSGLRAQAGRMRVISENIANVDSTAQTPGGDPYRRKVPTFSSALDRTLDARV 67

Query: 64  KKIG---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +G    D STF  +++P +P A+ASG VKYPNVN LVE  DMR   R Y ANL  I  
Sbjct: 68  VTLGRVKPDMSTFRVKYEPSNPAADASGNVKYPNVNSLVEMTDMRNAQRSYEANLNIISA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|89068702|ref|ZP_01156088.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
 gi|89045665|gb|EAR51727.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
          Length = 136

 Score =  123 bits (308), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 62/136 (45%), Positives = 86/136 (63%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HG 57
           MD L +   IA SG+  Q  R++I++EN+ANA + G TPG+DPYRRKT+SFEE++    G
Sbjct: 1   MDPLKSITSIAASGMHAQGQRLRIVAENVANADSRGTTPGADPYRRKTVSFEEMIDRESG 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V+V +IG D + F    DP HP A+ +G VK PNVN ++E  +MRE  R Y AN+  
Sbjct: 61  AALVKVGEIGRDTTDFTLVHDPAHPAADENGFVKVPNVNAIIEMTNMREAARSYEANMNM 120

Query: 118 IKQSHDMMTTTLDLLR 133
            +    M    LDLL+
Sbjct: 121 YEAGRAMRQQILDLLK 136


>gi|306841051|ref|ZP_07473775.1| flagellar basal-body rod protein FlgC [Brucella sp. BO2]
 gi|306288940|gb|EFM60240.1| flagellar basal-body rod protein FlgC [Brucella sp. BO2]
          Length = 107

 Score =  123 bits (308), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 78/104 (75%), Gaps = 3/104 (2%)

Query: 33  RTTGDTPGSDPYRRKTISFE-EVMHGSGG--VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           ++T  T  +DPYRRKT+SF  E+  G+G   VRV ++G D S F+E++DP HP A+A G 
Sbjct: 2   QSTARTADADPYRRKTVSFRTELEQGTGAAEVRVAEVGKDTSPFIEQYDPSHPAADARGY 61

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VKYPNVN++VE ADMRE NR Y ANLQ ++Q+ ++++ T+DLLR
Sbjct: 62  VKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLR 105


>gi|114570487|ref|YP_757167.1| flagellar basal body rod protein FlgC [Maricaulis maris MCS10]
 gi|114340949|gb|ABI66229.1| flagellar basal-body rod protein FlgC [Maricaulis maris MCS10]
          Length = 137

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/128 (50%), Positives = 77/128 (60%), Gaps = 3/128 (2%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRVKK 65
            I+  G+  Q+ARM+IISENIANA +T    G DPYRR+   FE  +    G   VR+  
Sbjct: 9   QISAFGMRAQAARMRIISENIANADSTAREAGGDPYRRQVPVFEAELDRATGLNAVRMTD 68

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  DQS F  E+DPGHP ANA G V+Y NV  LVE  DMRE  R Y ANL  I+ +  M 
Sbjct: 69  VAHDQSEFTLEYDPGHPAANAEGYVQYSNVQTLVEMMDMREAMRSYEANLNMIENARRMQ 128

Query: 126 TTTLDLLR 133
              LDLLR
Sbjct: 129 ERALDLLR 136


>gi|328543166|ref|YP_004303275.1| flagellar basal-body rod protein C [polymorphum gilvum SL003B-26A1]
 gi|326412912|gb|ADZ69975.1| Flagellar basal-body rod protein C [Polymorphum gilvum SL003B-26A1]
          Length = 136

 Score =  122 bits (306), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/133 (45%), Positives = 86/133 (64%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGG 60
           L+ S  I+ SGL  Q+ R+++I+EN+ANA +TG TP  DPYRRK  +F+        +  
Sbjct: 3   LVKSLFISASGLKAQNGRIRVIAENLANADSTGRTPDEDPYRRKIPTFKNRFDRDLQAEL 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V + K+  D+S F   ++PGHP A+A+G V+ PNVN LVET DMRE  R Y ANL  I+ 
Sbjct: 63  VELGKLAEDRSEFPTRYEPGHPAADANGNVRVPNVNSLVETVDMREAQRSYEANLNVIES 122

Query: 121 SHDMMTTTLDLLR 133
           +  M+  T+D+LR
Sbjct: 123 TRRMLQRTIDILR 135


>gi|148256779|ref|YP_001241364.1| flagellar basal body rod protein FlgC [Bradyrhizobium sp. BTAi1]
 gi|146408952|gb|ABQ37458.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
           [Bradyrhizobium sp. BTAi1]
          Length = 141

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 83/133 (62%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
            + S  IA SGL  Q+ RM++ISENIANA +T    G DPYRRK  +F   +  +   +V
Sbjct: 8   FVRSMSIATSGLRAQAGRMRVISENIANADSTAAKAGGDPYRRKVPTFSSALDRALDAKV 67

Query: 64  KKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +G    DQS+F  ++DP +P A+ASG VKYPNVN LVE  DMR+  R Y ANL  I  
Sbjct: 68  VTLGKVVPDQSSFRVKYDPSNPAADASGNVKYPNVNPLVEMTDMRDAQRSYEANLNIIGA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|83594157|ref|YP_427909.1| flagellar basal body rod protein FlgC [Rhodospirillum rubrum ATCC
           11170]
 gi|83577071|gb|ABC23622.1| Flagellar basal-body rod protein FlgC [Rhodospirillum rubrum ATCC
           11170]
          Length = 137

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/136 (44%), Positives = 84/136 (61%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           MD L  +A IA SGL  Q+ R++ I++N+ANA +  +  G DPYRR+ ++F+ VM    G
Sbjct: 1   MDELKQTAAIATSGLKAQTERLRTIAQNMANADSMAERQGEDPYRRRVVTFKSVMDREVG 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  VR  ++  D S F  ++DP HP A+A G V  PNVN +VE  DMRE  R Y ANL  
Sbjct: 61  AEMVRTGRVREDMSAFTRKYDPSHPGADAEGYVLAPNVNPMVEMMDMREAQRSYEANLNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I  + +M   TL+LLR
Sbjct: 121 ITATREMTRNTLELLR 136


>gi|254292929|ref|YP_003058952.1| flagellar basal-body rod protein FlgC [Hirschia baltica ATCC 49814]
 gi|254041460|gb|ACT58255.1| flagellar basal-body rod protein FlgC [Hirschia baltica ATCC 49814]
          Length = 138

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/133 (45%), Positives = 86/133 (64%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-HGSGGVR 62
           L+++   A SGL  Q+ R+++ +EN+ANA +TGDTPG+DPY+RK   F+  +   SG  R
Sbjct: 5   LMSAMSSAASGLRAQTVRIRVSAENLANANSTGDTPGADPYQRKVPVFKNYLDRESGAER 64

Query: 63  VKKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VK  GV  D + F  +FDP HP A+  G+VKY NV+ LVE  DMRE  R Y ANL  ++ 
Sbjct: 65  VKVSGVHNDTAPFTVKFDPTHPAADEGGMVKYSNVSALVEMTDMREAQRAYEANLNVVEA 124

Query: 121 SHDMMTTTLDLLR 133
           S  M+   +D+L+
Sbjct: 125 SRSMLLAAVDILK 137


>gi|75675326|ref|YP_317747.1| flagellar basal body rod protein FlgC [Nitrobacter winogradskyi
           Nb-255]
 gi|74420196|gb|ABA04395.1| Flagellar basal-body rod protein FlgC [Nitrobacter winogradskyi
           Nb-255]
          Length = 141

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 82/133 (61%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
            + S  IA SGL  Q+ RM++ISENIANA +T   PG DPYRRK  +F   +  +   +V
Sbjct: 8   FMRSMSIATSGLRAQAGRMRVISENIANANSTAQAPGGDPYRRKVPTFSSALDRALDAKV 67

Query: 64  KKIG---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +G    D STF  + +PG+P A+ SG VKYPNVN LVE  DMR+  R Y ANL  I  
Sbjct: 68  VTLGRVRPDTSTFRIKHEPGNPAADTSGNVKYPNVNPLVEMTDMRDAQRSYEANLNIISA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|92116946|ref|YP_576675.1| flagellar basal body rod protein FlgC [Nitrobacter hamburgensis
           X14]
 gi|91799840|gb|ABE62215.1| flagellar basal-body rod protein FlgC [Nitrobacter hamburgensis
           X14]
          Length = 141

 Score =  120 bits (301), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 82/133 (61%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
            + S  IA SGL  Q+ RM++ISENIANA +T   PG DPYRRK  +F   +  +   +V
Sbjct: 8   FMRSMSIATSGLRAQAGRMRVISENIANADSTAQVPGGDPYRRKVPTFSSALDRALDAKV 67

Query: 64  KKIG---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +G    D STF  + +P +P A+ASG VKYPNVN LVE  DMR+  R Y ANL  I  
Sbjct: 68  VSLGRVKPDMSTFRIKHEPSNPAADASGNVKYPNVNSLVEMTDMRDAQRSYEANLNIISA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|146341894|ref|YP_001206942.1| flagellar basal body rod protein FlgC [Bradyrhizobium sp. ORS278]
 gi|146194700|emb|CAL78725.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
           [Bradyrhizobium sp. ORS278]
          Length = 141

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 83/133 (62%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
            + S  IA SGL  Q+ RM++ISENIANA +T    G DPYRRK  +F   +  +   +V
Sbjct: 8   FLRSMTIATSGLRAQAGRMRVISENIANADSTAAKAGGDPYRRKVPTFTSALDRALDAKV 67

Query: 64  KKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +G    DQS+F  ++DP +P A+ASG VKYPNVN L+E  DMR+  R Y ANL  I  
Sbjct: 68  VTLGKVVPDQSSFRVKYDPSNPAADASGNVKYPNVNPLIEMTDMRDAQRSYEANLNIIGA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|163794133|ref|ZP_02188106.1| flagellar basal body rod protein [alpha proteobacterium BAL199]
 gi|159180747|gb|EDP65266.1| flagellar basal body rod protein [alpha proteobacterium BAL199]
          Length = 136

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGG 60
           L  +  I+ SG+  Q  R+++++EN+ANA + G+T   DPYRRKTI+FE  +     +  
Sbjct: 3   LTNAIKISASGMRAQGTRLRVVAENVANAESLGNTAADDPYRRKTITFENELDRKINADM 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VR+ KIG DQ  F   ++P HP+A+  G +K PNVN L+E  DMRE  R Y AN+  I+ 
Sbjct: 63  VRISKIGRDQGDFNIVYEPHHPLADDKGYIKMPNVNTLIEMTDMREAERSYEANVSVIES 122

Query: 121 SHDMMTTTLDLLR 133
           S  ++  TL+LLR
Sbjct: 123 SKSLIERTLELLR 135


>gi|58039961|ref|YP_191925.1| flagellar basal body rod protein FlgC [Gluconobacter oxydans 621H]
 gi|58002375|gb|AAW61269.1| Flagellar basal-body rod protein FlgC [Gluconobacter oxydans 621H]
          Length = 135

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/127 (45%), Positives = 81/127 (63%), Gaps = 3/127 (2%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRVKKI 66
           I+ SG+  Q+ R++I++EN+AN  TTG  PG+DPYRRKTI+F E +    G+  V V+ +
Sbjct: 9   ISASGMDAQAQRLRIVAENLANQDTTGSQPGADPYRRKTITFAEHVDDETGASTVDVQNV 68

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G D S F   +DP HP A+  G VK  NV+ + E  DMRE  R Y ANL  +  +  M++
Sbjct: 69  GQDMSDFDTRYDPSHPAADERGYVKVSNVDSMTEMMDMREAERSYEANLNALSSTRTMLS 128

Query: 127 TTLDLLR 133
            TLDLL+
Sbjct: 129 RTLDLLK 135


>gi|299131775|ref|ZP_07024970.1| flagellar basal-body rod protein FlgC [Afipia sp. 1NLS2]
 gi|298591912|gb|EFI52112.1| flagellar basal-body rod protein FlgC [Afipia sp. 1NLS2]
          Length = 141

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/137 (47%), Positives = 86/137 (62%), Gaps = 5/137 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+L  S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  +  
Sbjct: 5   MDFL-KSMSIATSGLRAQAGRMRVISENIANADSTASTAGGDPYRRKVPTFSSTLDRTLD 63

Query: 61  VRVKKIGVDQ----STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +V  +G  +    S+F  + +PG+P A+A+G VKYPNVN LVE  DMRE  R Y ANL 
Sbjct: 64  AQVVSLGRVKTDTTSSFRIKHEPGNPAADANGNVKYPNVNSLVEMTDMREAQRSYEANLN 123

Query: 117 TIKQSHDMMTTTLDLLR 133
            I  +  M+  TLD+L+
Sbjct: 124 IISATRRMIQRTLDILK 140


>gi|23016627|ref|ZP_00056381.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 136

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 83/136 (61%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           MD L  S  IA SG+ VQS R+++ISEN+AN+ +   TP   PYRRK ++F+  +    G
Sbjct: 1   MDELSKSTTIAISGMKVQSQRLRLISENLANSDSLAQTPEGLPYRRKVMTFKNELDRATG 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V+V K+  D S F   +DP HP A+  G V  PNVN L+E  DMRE  R Y AN+  
Sbjct: 61  TSLVKVDKVRADSSEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREAQRSYEANMNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I  S  +++ T+D+LR
Sbjct: 121 INASRSLLSRTIDMLR 136


>gi|209884536|ref|YP_002288393.1| flagellar basal-body rod protein FlgC [Oligotropha carboxidovorans
           OM5]
 gi|209872732|gb|ACI92528.1| flagellar basal-body rod protein FlgC [Oligotropha carboxidovorans
           OM5]
          Length = 141

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/137 (48%), Positives = 86/137 (62%), Gaps = 5/137 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+L  S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  S  
Sbjct: 5   MDFL-KSMSIATSGLRAQAGRMRVISENIANADSTAGTAGGDPYRRKVPTFVSALDRSLD 63

Query: 61  VRVKKIGVDQ----STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +V  +G  +    S+F  + +PG+P A+A+G VKYPNVN LVE  DMRE  R Y ANL 
Sbjct: 64  AQVVSLGRIKTDTASSFRIKHEPGNPAADANGNVKYPNVNSLVEMTDMREAQRSYEANLN 123

Query: 117 TIKQSHDMMTTTLDLLR 133
            I  +  M+  TLD+L+
Sbjct: 124 IISATRRMIQRTLDILK 140


>gi|144900468|emb|CAM77332.1| Flagellar basal-body rod protein FlgC [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 137

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 84/136 (61%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HG 57
           MD L  ++ IA SG+  QS R+++ISEN+ANA +   TP   PY+RK ++F+  +   +G
Sbjct: 1   MDELQKASKIAISGMKAQSERLRVISENLANADSLARTPDGTPYKRKVVTFKSELDRANG 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GV+V K+  D S F   +DP HP A+  G V  PNVN L+E  DMRE  R Y AN+  
Sbjct: 61  YTGVKVDKVRPDASEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREAQRSYEANMNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I  S  +++ T+++LR
Sbjct: 121 INSSRQLLSRTVEMLR 136


>gi|329890582|ref|ZP_08268925.1| flagellar basal-body rod protein FlgC [Brevundimonas diminuta ATCC
           11568]
 gi|328845883|gb|EGF95447.1| flagellar basal-body rod protein FlgC [Brevundimonas diminuta ATCC
           11568]
          Length = 144

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/125 (46%), Positives = 83/125 (66%), Gaps = 1/125 (0%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGGVRVKKIGV 68
           +A+S L  Q +RM+II+ENIANA +T +  G  PYRR+T  F+   + G+ GV + ++  
Sbjct: 19  VASSALKAQQSRMRIIAENIANAESTANVAGGQPYRRQTPVFQARNVDGATGVVLAEVRP 78

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           DQS F  ++DP HP ANA G V+ PNV+ LVE  DMRE  R Y ANL  I+ + +M + T
Sbjct: 79  DQSDFRMDYDPSHPAANAEGYVQRPNVDTLVEAMDMREAQRAYEANLNVIETARNMDSRT 138

Query: 129 LDLLR 133
           LD+++
Sbjct: 139 LDIIK 143


>gi|27380924|ref|NP_772453.1| flagellar basal body rod protein FlgC [Bradyrhizobium japonicum
           USDA 110]
 gi|27354090|dbj|BAC51078.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 141

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/130 (46%), Positives = 82/130 (63%), Gaps = 3/130 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  +   +V  +
Sbjct: 11  SMAIATSGLRAQAGRMRVISENIANADSTSQTAGGDPYRRKVPTFSSALDRTLDAQVVTL 70

Query: 67  G---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           G    DQS F  +++P +P A+A+G VKYPNVN +VE  DMR+  R Y ANL  I  +  
Sbjct: 71  GRIKPDQSNFRTKYEPNNPAADATGNVKYPNVNSVVEMTDMRDAQRSYEANLNIISATRR 130

Query: 124 MMTTTLDLLR 133
           M+  TLD+L+
Sbjct: 131 MIQRTLDILK 140


>gi|302384099|ref|YP_003819922.1| flagellar basal-body rod protein FlgC [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194727|gb|ADL02299.1| flagellar basal-body rod protein FlgC [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 144

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/125 (47%), Positives = 80/125 (64%), Gaps = 1/125 (0%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGGVRVKKIGV 68
           +A S L  Q +RM+II+ENIANA +T  T G  PYRR+   FE   + G+ GV + ++  
Sbjct: 19  VAASALTAQQSRMRIIAENIANAESTARTAGGQPYRRQIPVFEARQIDGATGVSLAEVRP 78

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           DQS F  E+DP HP A+A G V  PNV+ L+E+ DMRE  R Y ANL  I+ +  M + T
Sbjct: 79  DQSDFRREYDPSHPAADADGYVLRPNVDSLIESMDMREAQRAYEANLNVIETARTMESRT 138

Query: 129 LDLLR 133
           LD+L+
Sbjct: 139 LDILK 143


>gi|315498435|ref|YP_004087239.1| flagellar basal-body rod protein flgc [Asticcacaulis excentricus CB
           48]
 gi|315416447|gb|ADU13088.1| flagellar basal-body rod protein FlgC [Asticcacaulis excentricus CB
           48]
          Length = 140

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/125 (46%), Positives = 82/125 (65%), Gaps = 1/125 (0%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSGGVRVKKIGV 68
           +A S L  Q ARM+II+ENIANA +TG TPG+DPYR +   FE   + G+ GV++  +  
Sbjct: 15  VAASALRAQQARMRIIAENIANADSTGQTPGADPYRGQIPVFEAAKIDGAMGVKLAAVRP 74

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D++ F  ++DP HP A+A+G VK  NV  L+++ DMR+  R Y ANL  I+ +  M   T
Sbjct: 75  DEAAFEMDYDPSHPAADANGYVKRSNVKSLIQSMDMRDAQRAYEANLNVIETTRSMEQKT 134

Query: 129 LDLLR 133
           LDLL+
Sbjct: 135 LDLLK 139


>gi|254419217|ref|ZP_05032941.1| flagellar basal-body rod protein FlgC [Brevundimonas sp. BAL3]
 gi|196185394|gb|EDX80370.1| flagellar basal-body rod protein FlgC [Brevundimonas sp. BAL3]
          Length = 128

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 81/125 (64%), Gaps = 1/125 (0%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGGVRVKKIGV 68
           +A S L  Q +RM++I+ENIANA++T  TPG +PYRR+   F+   + G+ GV + ++  
Sbjct: 3   VAASALKAQQSRMRVIAENIANAQSTARTPGGEPYRRQIPVFQAREVDGATGVTLAEVRP 62

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           DQ  F  ++DP HP ANA G V  PNV+ LVE  DMRE  R Y ANL  I+ +  M + T
Sbjct: 63  DQGEFKMDYDPSHPAANAQGYVMRPNVDTLVEAMDMREAQRAYEANLNVIETARSMDSRT 122

Query: 129 LDLLR 133
           LD+++
Sbjct: 123 LDIIK 127


>gi|115523571|ref|YP_780482.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
 gi|115517518|gb|ABJ05502.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
          Length = 141

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 82/130 (63%), Gaps = 3/130 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           S  IA SGL  Q+ RM++I+ENIANA++T  T G DPYRRK  +F   +  +   RV  +
Sbjct: 11  SMAIATSGLRAQAGRMRVIAENIANAQSTAQTAGGDPYRRKVPTFTTALDRALDARVVAL 70

Query: 67  G---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           G    D S F  +++P +P A+A+G VKYPNVN L+E  DMR+  R Y ANL  I  +  
Sbjct: 71  GRVKPDTSPFQIKYEPSNPAADAAGNVKYPNVNPLIEMTDMRDAQRSYEANLNIISATRR 130

Query: 124 MMTTTLDLLR 133
           M+  TLD+L+
Sbjct: 131 MVQRTLDILK 140


>gi|316932834|ref|YP_004107816.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           DX-1]
 gi|315600548|gb|ADU43083.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           DX-1]
          Length = 141

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 61/130 (46%), Positives = 81/130 (62%), Gaps = 3/130 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  S   RV  +
Sbjct: 11  SMAIATSGLRAQAGRMRVISENIANADSTAQTAGGDPYRRKVPTFTSALDRSLDARVVAL 70

Query: 67  G---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           G    D S F  +++P +P A+A+G VKYPNVN ++E  DMR+  R Y ANL  I  +  
Sbjct: 71  GRVKPDTSAFRVKYEPTNPAADANGNVKYPNVNPVIEMTDMRDAQRSYEANLNVISATRR 130

Query: 124 MMTTTLDLLR 133
           M+  TLD+L+
Sbjct: 131 MIQRTLDILK 140


>gi|83858796|ref|ZP_00952318.1| flagellar basal-body rod protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853619|gb|EAP91471.1| flagellar basal-body rod protein [Oceanicaulis alexandrii HTCC2633]
          Length = 138

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 86/136 (63%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           +D +  +  I+ +GL  QS+RM++I+EN+ANA +T  TP  +PY+R+   FE       G
Sbjct: 2   VDRVSETLQISAAGLRAQSSRMRVIAENVANAESTARTPEENPYQRQIPVFESEFDRQVG 61

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  VR+  + +D+S F   ++PGHP A+  G VKYPNV+ LVE  DMR+  R Y ANL  
Sbjct: 62  TELVRMNDVALDESDFRMVYEPGHPAADGEGYVKYPNVSSLVELMDMRDAQRSYEANLTM 121

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  M+  TLDLLR
Sbjct: 122 VEGTRRMLERTLDLLR 137


>gi|118588700|ref|ZP_01546108.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
 gi|118438686|gb|EAV45319.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
          Length = 136

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 80/133 (60%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGG 60
           LI S  I+ SGL  Q+ RM+II+ENIANA +T  TP   PYRRK  +F+       G+  
Sbjct: 3   LIKSLFISASGLRAQNGRMRIIAENIANANSTAKTPEELPYRRKIPTFKSHFDREMGADM 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V + KI  D + F     PGHP A+A+G V  PNVN L+ET DMRE  R Y ANL  I  
Sbjct: 63  VELGKIAEDNTDFRSVLMPGHPAADANGYVLQPNVNTLIETTDMREAQRSYEANLNVIDS 122

Query: 121 SHDMMTTTLDLLR 133
           +  M+  T+D+LR
Sbjct: 123 TRKMLQRTIDILR 135


>gi|162147439|ref|YP_001601900.1| flagellar basal body rod protein FlgC [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786016|emb|CAP55598.1| putative flagellar basal-body rod protein flgC [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 135

 Score =  117 bits (292), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 83/127 (65%), Gaps = 3/127 (2%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV---RVKKI 66
           ++ +G+  Q  R+++ +EN+AN  TTG T G+DPYRRKTI+F+  +  + GV   +VK I
Sbjct: 9   VSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASGVSSVKVKGI 68

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G D + F  ++DP HP A+A+G VK PNVN +VE  D  E    Y ANL T++ S  M T
Sbjct: 69  GQDNTPFQTKYDPSHPAADANGYVKMPNVNSMVEIMDTHEAQHSYEANLNTMQISRSMAT 128

Query: 127 TTLDLLR 133
            T++L++
Sbjct: 129 RTINLIK 135


>gi|86750885|ref|YP_487381.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           HaA2]
 gi|86573913|gb|ABD08470.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           HaA2]
          Length = 141

 Score =  117 bits (292), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 79/130 (60%), Gaps = 3/130 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           S  IA SGL  Q+ RM++ISENIANA +T   PG DPYRRK  +F   +  S   R   +
Sbjct: 11  SMGIATSGLRAQAGRMRVISENIANADSTAQKPGGDPYRRKVPTFTSALDRSLDARTVAL 70

Query: 67  G---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           G    D S F  +++P +P A+A+G VKYPNVN ++E  DMR   R Y ANL  I  +  
Sbjct: 71  GRVKPDTSAFRLKYEPTNPAADAAGNVKYPNVNSMIEMTDMRSAQRSYEANLNVISATRR 130

Query: 124 MMTTTLDLLR 133
           M+  TLD+L+
Sbjct: 131 MIQRTLDILK 140


>gi|295690698|ref|YP_003594391.1| flagellar basal-body rod protein FlgC [Caulobacter segnis ATCC
           21756]
 gi|295432601|gb|ADG11773.1| flagellar basal-body rod protein FlgC [Caulobacter segnis ATCC
           21756]
          Length = 139

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 79/120 (65%), Gaps = 1/120 (0%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSGGVRVKKIGVDQSTF 73
           L  Q  RM++I+ENIANA +T  T G DPYRR+   F    + G+ GV++ ++  DQS F
Sbjct: 19  LRAQQGRMRVIAENIANANSTATTAGGDPYRRQLPIFRPTKVQGAEGVQMVRVDPDQSDF 78

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             E+DPG+P A+A+G VK PNVN LVE  DM+E  R Y ANL  I+ +  M + TLD+L+
Sbjct: 79  KTEYDPGNPAADANGYVKLPNVNSLVEALDMKEAQRAYEANLNVIETARVMESRTLDILK 138


>gi|209545549|ref|YP_002277778.1| flagellar basal body rod protein FlgC [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209533226|gb|ACI53163.1| flagellar basal-body rod protein FlgC [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 135

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 82/127 (64%), Gaps = 3/127 (2%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV---RVKKI 66
           ++ +G+  Q  R+++ +EN+AN  TTG T G+DPYRRKTI+F+  +  + GV   +VK I
Sbjct: 9   VSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASGVSSVKVKGI 68

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G D + F  ++DP HP A+A G VK PNVN +VE  D  E    Y ANL T++ S  M T
Sbjct: 69  GQDNTPFQTKYDPSHPAADAKGYVKMPNVNSMVEIMDTHEAQHSYEANLNTMQISRSMAT 128

Query: 127 TTLDLLR 133
            T++L++
Sbjct: 129 RTINLIK 135


>gi|84502401|ref|ZP_01000537.1| flagellar basal body rod protein [Oceanicola batsensis HTCC2597]
 gi|84389213|gb|EAQ02010.1| flagellar basal body rod protein [Oceanicola batsensis HTCC2597]
          Length = 136

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 84/136 (61%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L +   I+ SG+  Q  R++++SEN+ANA +T  +PG DPYRRKTI+FEE++    G
Sbjct: 1   MDPLKSILTISASGMLAQGERLKVVSENVANASSTAMSPGEDPYRRKTITFEELLDSESG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    V  I  D S F   F+P HP A+  G +K  NV+ ++E A+MRE +R Y AN+  
Sbjct: 61  VSTVGVSSIDRDDSDFSLRFEPSHPAADEQGFIKVSNVSPIMEMANMREASRSYEANMNL 120

Query: 118 IKQSHDMMTTTLDLLR 133
            + +  M +  +DLL+
Sbjct: 121 FEAARRMRSQVIDLLK 136


>gi|39936948|ref|NP_949224.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           CGA009]
 gi|192292776|ref|YP_001993381.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           TIE-1]
 gi|39650805|emb|CAE29328.1| flagellar basal-body rod protein flgC [Rhodopseudomonas palustris
           CGA009]
 gi|192286525|gb|ACF02906.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           TIE-1]
          Length = 141

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 59/130 (45%), Positives = 81/130 (62%), Gaps = 3/130 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           S  IA SGL  Q+ RM++ISEN+ANA +T   PG DPYRRK  +F   +  +   RV  +
Sbjct: 11  SMGIATSGLRAQAGRMRVISENVANADSTAQNPGGDPYRRKVPTFTSALDRTLDARVVAL 70

Query: 67  G---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           G    D S F  +++P +P A+A+G VKYPNVN ++E  DMR+  R Y ANL  I  +  
Sbjct: 71  GRVKPDTSAFRVKYEPTNPAADANGNVKYPNVNPVIEMTDMRDAQRSYEANLNVISATRR 130

Query: 124 MMTTTLDLLR 133
           M+  TLD+L+
Sbjct: 131 MIQRTLDILK 140


>gi|83309714|ref|YP_419978.1| flagellar basal body rod protein FlgC [Magnetospirillum magneticum
           AMB-1]
 gi|82944555|dbj|BAE49419.1| Flagellar basal body rod protein [Magnetospirillum magneticum
           AMB-1]
          Length = 136

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           MD L  S   A SG+ VQS R+++ISEN+ANA +   TP   PYRRK ++F+  +    G
Sbjct: 1   MDELSKSTQTAISGMKVQSQRLRVISENLANADSLAQTPEGLPYRRKVMTFKNELDRATG 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V+V K+  D + F   +DP HP A+  G V  PNVN L+E  DMRE  R Y AN+  
Sbjct: 61  TNVVKVDKVRADSAEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREAQRSYEANMNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I  S  +++ T+++LR
Sbjct: 121 INASRSLLSRTIEMLR 136


>gi|254502506|ref|ZP_05114657.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
 gi|222438577|gb|EEE45256.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
          Length = 136

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/133 (45%), Positives = 83/133 (62%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGG 60
           L+ S  I+ SGL  Q+ RM++I+ENIANA +T  TP  +PYRRK  +F+       G+  
Sbjct: 3   LMKSLFISASGLKAQNGRMRVIAENIANANSTARTPDEEPYRRKIPTFQSEFDKQLGADK 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V + +I  D+S F     PGHP A+ +G V  PNV+ LVE+ADMRE  R Y ANL  I+ 
Sbjct: 63  VELGRIVEDKSAFKSTHMPGHPAADENGYVLQPNVSTLVESADMREAQRSYEANLNVIET 122

Query: 121 SHDMMTTTLDLLR 133
           +  M+  T+D+LR
Sbjct: 123 TRKMLQRTIDILR 135


>gi|329849687|ref|ZP_08264533.1| flagellar basal-body rod protein FlgC [Asticcacaulis biprosthecum
           C19]
 gi|328841598|gb|EGF91168.1| flagellar basal-body rod protein FlgC [Asticcacaulis biprosthecum
           C19]
          Length = 138

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/117 (47%), Positives = 76/117 (64%), Gaps = 1/117 (0%)

Query: 18  QSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSGGVRVKKIGVDQSTFVEE 76
           Q ARM++ +ENIANA + G TPG+DPYRR+   F+   + G+ GVR+ ++  D   F  E
Sbjct: 21  QQARMRVTAENIANASSLGTTPGADPYRRQIPVFQSTNIDGATGVRLARVVPDMKEFATE 80

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +DP HP A+A G VK PNV+ L E+ DMRE  R Y ANL  I+ + DM    L++L+
Sbjct: 81  YDPSHPAADAQGYVKRPNVDTLTESMDMREAQRAYEANLNVIETARDMNQKILNILQ 137


>gi|188581884|ref|YP_001925329.1| flagellar basal body rod protein FlgC [Methylobacterium populi
           BJ001]
 gi|179345382|gb|ACB80794.1| flagellar basal-body rod protein FlgC [Methylobacterium populi
           BJ001]
          Length = 136

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/137 (45%), Positives = 86/137 (62%), Gaps = 6/137 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK----TISFEEVMH 56
           MD+L  S  IA SGL  QS RM+II+ENIANA +   TPG DPYRRK    T  F+  ++
Sbjct: 1   MDFL-KSLGIAASGLKAQSGRMRIIAENIANADSAAQTPGGDPYRRKIPTFTNRFDRELN 59

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S  V   ++  D + F  ++DPG+P A+A G V+ PNVN L+E  DMRE  R Y ANL 
Sbjct: 60  ASV-VEAGRVRRDPTPFRTKYDPGNPAADARGEVRLPNVNGLIENMDMREAQRSYEANLN 118

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  M++ TL++L+
Sbjct: 119 MVTATRRMISRTLEILK 135


>gi|114765223|ref|ZP_01444355.1| flagellar basal-body rod protein C [Pelagibaca bermudensis
           HTCC2601]
 gi|114542358|gb|EAU45386.1| flagellar basal-body rod protein C [Roseovarius sp. HTCC2601]
          Length = 136

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 83/136 (61%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HG 57
           MD L     +A SG+  Q  R++++SEN+ANA +TG++ G DPYRRK ISF+E++    G
Sbjct: 1   MDTLKTVLSVAASGMRAQGERLKVVSENVANASSTGNSNGEDPYRRKIISFQEMVDRDSG 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V V  +  D + F   +DP HP A+  G VK  NVN ++E ++MRE +R Y ANL  
Sbjct: 61  ASMVEVDGVRRDDADFQLNYDPSHPAADEDGFVKVSNVNTILEMSNMREASRSYQANLNM 120

Query: 118 IKQSHDMMTTTLDLLR 133
            +    M +  LDLL+
Sbjct: 121 FETGRSMRSQLLDLLK 136


>gi|23009956|ref|ZP_00050814.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 136

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/136 (45%), Positives = 83/136 (61%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD++  S  IA SGL  QS RM+II+ENIANA +T  T G +PYRRK  +F         
Sbjct: 1   MDFM-KSLGIAASGLKAQSGRMRIIAENIANADSTAKTAGGEPYRRKVPTFASRFDRELD 59

Query: 61  VRV---KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            +V    +I  D S F  ++DPG+P A+A G V+ PNVN L+E  DMRE  R Y ANL  
Sbjct: 60  AKVIEAGRIARDPSPFRTKYDPGNPAADARGEVRLPNVNGLIENMDMREAQRSYEANLNM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  M++ TLD+L+
Sbjct: 120 VTATRRMISRTLDILK 135


>gi|91976172|ref|YP_568831.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisB5]
 gi|91682628|gb|ABE38930.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisB5]
          Length = 141

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 79/130 (60%), Gaps = 3/130 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  S   R   +
Sbjct: 11  SMGIATSGLRAQAGRMRVISENIANAESTAQTAGGDPYRRKVPTFTSALDRSLDARTVAL 70

Query: 67  G---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           G    D S F  +++P +P A+A+G VKYPNVN ++E  DMR   R Y ANL  I  +  
Sbjct: 71  GRVKPDTSAFRVKYEPTNPSADAAGNVKYPNVNSVIEMTDMRNAQRSYEANLNVISATRR 130

Query: 124 MMTTTLDLLR 133
           M+  TLD+L+
Sbjct: 131 MIQRTLDILK 140


>gi|220925380|ref|YP_002500682.1| flagellar basal body rod protein FlgC [Methylobacterium nodulans
           ORS 2060]
 gi|219949987|gb|ACL60379.1| flagellar basal-body rod protein FlgC [Methylobacterium nodulans
           ORS 2060]
          Length = 136

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/136 (44%), Positives = 88/136 (64%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           MD++ A   IA SGL  QS RM++ISENIANA +   + G++PYRRK  +F   +     
Sbjct: 1   MDFMKAIG-IAASGLRAQSGRMRVISENIANADSEPKSAGAEPYRRKVPTFANRLDRELD 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V + ++  DQS F  + +PG+P A+A+G V+ PNVN+LVET DMRE  R Y ANL  
Sbjct: 60  ASVVELGRVRRDQSPFRTKHEPGNPAADANGEVRLPNVNLLVETVDMREAQRSYEANLNM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           I  +  M++ T+D+L+
Sbjct: 120 ITAARRMISRTIDILK 135


>gi|167645332|ref|YP_001682995.1| flagellar basal body rod protein FlgC [Caulobacter sp. K31]
 gi|167347762|gb|ABZ70497.1| flagellar basal-body rod protein FlgC [Caulobacter sp. K31]
          Length = 140

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 80/131 (61%), Gaps = 2/131 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSG-GVR 62
           +A+  IA S L  Q  RM++I+ENIANA +T    G DPYRR+   F+   + G G GV 
Sbjct: 9   MATMAIAASALKAQQGRMRVIAENIANANSTARVAGGDPYRRQVPVFKPTTLKGGGEGVV 68

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           + K+  D   F   +DPG+P A+A G VK PNV+ LVE  DM+E  R Y AN+  I+ S 
Sbjct: 69  MAKVDPDMKDFGTAYDPGNPAADAKGYVKLPNVDTLVEALDMKEAQRAYEANMNVIETSR 128

Query: 123 DMMTTTLDLLR 133
            M + TLD+LR
Sbjct: 129 AMESRTLDILR 139


>gi|170743258|ref|YP_001771913.1| flagellar basal body rod protein FlgC [Methylobacterium sp. 4-46]
 gi|168197532|gb|ACA19479.1| flagellar basal-body rod protein FlgC [Methylobacterium sp. 4-46]
          Length = 136

 Score =  113 bits (283), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 62/136 (45%), Positives = 85/136 (62%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD++ A   IA SGL  QS RM++ISENIANA +     G +PYRRK  +F   +     
Sbjct: 1   MDFMKAIG-IAASGLRAQSGRMRVISENIANADSEPTRAGVEPYRRKVPTFANRLDRELD 59

Query: 61  VRVKKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            R+  +G    DQ+ F  + DPG+PVA+A G V+ PNVN+LVET DMRE  R Y ANL  
Sbjct: 60  ARMVDLGRVRRDQAPFRTKHDPGNPVADAKGDVQLPNVNLLVETVDMREAQRSYEANLNM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  M++ T+D+L+
Sbjct: 120 VTAARRMISRTIDILK 135


>gi|163852027|ref|YP_001640070.1| flagellar basal body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218530781|ref|YP_002421597.1| flagellar basal body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240139294|ref|YP_002963769.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           AM1]
 gi|254561750|ref|YP_003068845.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           DM4]
 gi|163663632|gb|ABY30999.1| flagellar basal-body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218523084|gb|ACK83669.1| flagellar basal-body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240009266|gb|ACS40492.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           AM1]
 gi|254269028|emb|CAX24989.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           DM4]
          Length = 136

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/137 (45%), Positives = 85/137 (62%), Gaps = 6/137 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK----TISFEEVMH 56
           MD+L  S  IA SGL  QS RM+II+ENIANA +T  T G DPYRRK    T  F+  ++
Sbjct: 1   MDFL-KSLGIAASGLKAQSGRMRIIAENIANADSTAQTAGGDPYRRKIPTFTSRFDNELN 59

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S  V   ++  D + F  + DPG+P A+A G V+ PNVN L+E  DMRE  R Y ANL 
Sbjct: 60  ASV-VEAGRVRRDPTPFRTKHDPGNPAADARGEVRLPNVNGLIENMDMREAQRSYEANLN 118

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  M++ TL++L+
Sbjct: 119 MVTATRRMISRTLEILK 135


>gi|170748652|ref|YP_001754912.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655174|gb|ACB24229.1| flagellar basal-body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
          Length = 135

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 3/130 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           S  +A +GL  QS RM+II+ENIANA +   + G+ PYRRK  +F   +    G R+ + 
Sbjct: 6   SLAVAAAGLKAQSGRMRIIAENIANADSAPASAGAQPYRRKIPTFTSHLDDETGARLVEA 65

Query: 67  GV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           G    D S F  +++PG+P A+A G+V+ PNVN L+E  D+RE  R Y ANL  I  +  
Sbjct: 66  GRVKRDPSAFRTKYEPGNPAADAQGVVQMPNVNALIENMDLREAQRSYEANLNMISATRK 125

Query: 124 MMTTTLDLLR 133
           M+  TL +L+
Sbjct: 126 MLAQTLGILK 135


>gi|296531769|ref|ZP_06894591.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
 gi|296267908|gb|EFH13713.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
          Length = 146

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 3/126 (2%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---VRVKKIG 67
           A SG+  Q+ RM++ +ENIANA +T   PG D YRRK I+F+  +  + G   VR+  I 
Sbjct: 20  AASGMNTQATRMRVSAENIANASSTAAVPGGDAYRRKLITFDRAVDRATGAQLVRMDSIR 79

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            D   F  ++DP HP A+  G VK PNV+ LVE AD+R   R Y A++  ++Q+  +   
Sbjct: 80  NDPRDFRTQYDPAHPAADERGYVKLPNVDTLVEQADLRAAGRSYEASMAVLQQARALYGK 139

Query: 128 TLDLLR 133
           TLD+LR
Sbjct: 140 TLDILR 145


>gi|197103407|ref|YP_002128785.1| putative flagellar basal-body rod protein FlgC [Phenylobacterium
           zucineum HLK1]
 gi|196480683|gb|ACG80210.1| putative flagellar basal-body rod protein FlgC [Phenylobacterium
           zucineum HLK1]
          Length = 141

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 2/126 (1%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--EVMHGSGGVRVKKIG 67
           IA   L  Q ARM+II+ENIAN++TT  TPG DPYRR+   F   ++  GS  V++ +  
Sbjct: 14  IAAMALRAQQARMRIIAENIANSQTTAATPGGDPYRRQMPIFAPLKLEDGSVSVQLVRTE 73

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            D + F +E+ PGHP A+ SG V   NV  LVE+ D +   R Y ANL  I  SH M  +
Sbjct: 74  PDPTAFKKEYSPGHPAADPSGYVTLSNVETLVESLDFKAAQRAYEANLNVIDTSHAMEQS 133

Query: 128 TLDLLR 133
           T+ LL+
Sbjct: 134 TMRLLQ 139


>gi|313673746|ref|YP_004051857.1| flagellar basal-body rod protein flgc [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940502|gb|ADR19694.1| flagellar basal-body rod protein FlgC [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 134

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 82/127 (64%), Gaps = 3/127 (2%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVKKI 66
           ++A +GL+ Q  R+ +IS N+ANA TT    G +PY+RK + F+E++ G  +GGVRV+K+
Sbjct: 8   NVAATGLSAQRIRINVISSNLANANTTKTETG-EPYKRKDVVFKELLEGEYTGGVRVEKV 66

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D+  FV +++PGHP AN  G V+YPNVN + E  +M E +R Y AN+  +  +  +  
Sbjct: 67  VEDKKPFVLKYEPGHPDANEEGYVQYPNVNPIEEMVNMIEASRSYEANVTVLNTAKQLAM 126

Query: 127 TTLDLLR 133
             LD+ R
Sbjct: 127 RALDIGR 133


>gi|83944175|ref|ZP_00956631.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
 gi|83955124|ref|ZP_00963780.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
 gi|83840453|gb|EAP79626.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
 gi|83845042|gb|EAP82923.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
          Length = 122

 Score =  105 bits (263), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 76/122 (62%), Gaps = 3/122 (2%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGV--DQS 71
           +  Q  R++I+SEN+ANA +T  T G DPY+RKTISFE     S G   V+  GV  D +
Sbjct: 1   MRAQGDRLRIVSENLANASSTAQTAGGDPYQRKTISFESATDPSTGAAIVQSAGVLRDDA 60

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            F   ++P HP A+ +G +K PNVN L+E ++MRE  R Y ANL  + ++ DM    ++L
Sbjct: 61  DFTLRYEPSHPAADQNGYIKMPNVNPLIEMSNMREAARSYEANLSMLDKARDMRRQLVEL 120

Query: 132 LR 133
           L+
Sbjct: 121 LK 122


>gi|89069822|ref|ZP_01157157.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus
           HTCC2516]
 gi|89044623|gb|EAR50739.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus
           HTCC2516]
          Length = 128

 Score =  103 bits (258), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 77/125 (61%), Gaps = 8/125 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-VRVKKIGV 68
           +  SGL  QSAR++ +SENIAN+    DTPG   YRRKT++F +    + G V V  + +
Sbjct: 10  VVASGLRAQSARLRHVSENIANS----DTPG---YRRKTVTFRDAFGATAGEVAVGPVRL 62

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D S     FDP HP+A+ SG  +  NV++L+E AD RE  R Y ANL+  +Q   M T+ 
Sbjct: 63  DDSALERIFDPAHPLADESGHFEGSNVDLLIEIADAREAQRSYEANLKMFEQVRQMSTSL 122

Query: 129 LDLLR 133
           LDLLR
Sbjct: 123 LDLLR 127


>gi|310816827|ref|YP_003964791.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare
           Y25]
 gi|308755562|gb|ADO43491.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare
           Y25]
          Length = 127

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 7/124 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           IA SG+  Q++RM+  SENIANA    DTPG   Y RK +SF       G V   ++ +D
Sbjct: 10  IAASGMQAQASRMRFTSENIANA----DTPG---YHRKLVSFRAAHANDGTVEASRVRLD 62

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           ++   E +DP HP+AN  G     NV++L+E AD RE +R Y ANL+   Q   M T+ L
Sbjct: 63  RAPLAEIYDPAHPLANDQGNYSGSNVDLLIEIADAREASRSYEANLKVFDQVRQMSTSLL 122

Query: 130 DLLR 133
           DLLR
Sbjct: 123 DLLR 126


>gi|110677659|ref|YP_680666.1| flagellar basal body rod protein FlgC [Roseobacter denitrificans
           OCh 114]
 gi|163733139|ref|ZP_02140583.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och
           149]
 gi|109453775|gb|ABG29980.1| flagellar basal-body rod protein FlgC [Roseobacter denitrificans
           OCh 114]
 gi|161393674|gb|EDQ17999.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och
           149]
          Length = 129

 Score =  103 bits (257), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 79/135 (58%), Gaps = 9/135 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M     S  +  SGL  Q+ R++ +SENI+NA    DTPG   YRRK +SFE    G G 
Sbjct: 1   MSEFSKSLDVTTSGLKAQATRLRHLSENISNA----DTPG---YRRKLVSFETAFGGQGV 53

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V   ++ +DQST    +DP HP+A+ SG     NV++L+E +D RE  R Y ANL+  
Sbjct: 54  STVETSRVRLDQSTLERVYDPSHPMADESGYFDGSNVDLLIELSDAREAQRSYEANLKVF 113

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+  M ++ ++LLR
Sbjct: 114 EQTRKMSSSLMELLR 128


>gi|255264378|ref|ZP_05343720.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62]
 gi|255106713|gb|EET49387.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62]
          Length = 130

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 10/130 (7%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGVRV 63
           S  I+ SG+A Q+ R++  SENIANA    DTPG   YRRKT SFE ++     +G V  
Sbjct: 7   SLAISASGMAAQTDRLRFTSENIANA----DTPG---YRRKTTSFEAIVEQGQSTGAVTT 59

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             + +D++     FDP HP+A+ASG  +  NV++L+E AD RE  R Y ANL+   QS  
Sbjct: 60  GPMVLDKTELDRVFDPSHPMADASGYYQGTNVDLLIEIADAREAQRSYEANLKMFDQSRQ 119

Query: 124 MMTTTLDLLR 133
           M ++ ++LLR
Sbjct: 120 MSSSLMELLR 129


>gi|260574405|ref|ZP_05842409.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2]
 gi|259023301|gb|EEW26593.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2]
          Length = 126

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 81/130 (62%), Gaps = 8/130 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L+ S  +A SG+  Q+ R++ +SENIANA    DTPG   Y RKT+SF+E M G G V  
Sbjct: 4   LLQSLTMAASGMEAQAMRLRHVSENIANA----DTPG---YHRKTMSFQEAMDG-GTVEA 55

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             + +D+S  V+ +DPGHP+A+ +G     NV++++E AD RE  R Y ANL+   Q+  
Sbjct: 56  GPVRLDRSELVKIYDPGHPLADETGHYDGSNVDLVIEIADAREAQRSYEANLKMFDQARQ 115

Query: 124 MMTTTLDLLR 133
           M  +  +LLR
Sbjct: 116 MTQSLFELLR 125


>gi|114777413|ref|ZP_01452410.1| Flagellar basal-body rod protein FlgC [Mariprofundus ferrooxydans
           PV-1]
 gi|114552195|gb|EAU54697.1| Flagellar basal-body rod protein FlgC [Mariprofundus ferrooxydans
           PV-1]
          Length = 148

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 80/145 (55%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
           L++S HI+ SG++ Q  RM I++ENIANA +T  + G  PYRR+ + F+ V         
Sbjct: 5   LLSSMHISASGMSAQRTRMDIVAENIANAGSTRTSEGG-PYRRRQVIFQAVSPAQPFSQV 63

Query: 56  -------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                   G   V+   I  D+  F E +DP HP A+A GIVK PNVN + E  DM    
Sbjct: 64  FNSSFQSEGQKSVKAAYIAQDKKPFREVYDPSHPDADARGIVKMPNVNPVEEMVDMNSAA 123

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN+ T++ S  M   +L+LLR
Sbjct: 124 RSFEANVTTMEASKRMFLKSLELLR 148


>gi|260431752|ref|ZP_05785723.1| flagellar basal-body rod protein FlgC [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415580|gb|EEX08839.1| flagellar basal-body rod protein FlgC [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 128

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/129 (42%), Positives = 80/129 (62%), Gaps = 10/129 (7%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--VRVK 64
           S  +  S L  Q+AR++ +SENI+NA    DTPG   YRRKT+ FE V H  G   V+  
Sbjct: 7   SLEVTASALRAQAARLRHVSENISNA----DTPG---YRRKTVPFEAV-HKDGADLVQAG 58

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           ++ +DQS     +DPGHP+A+ SG  +  NV++++E AD RE  R Y ANL+   Q+  M
Sbjct: 59  RVRLDQSKLSRIYDPGHPLADESGHYQGSNVDLMIEIADAREAQRSYEANLKMFDQARQM 118

Query: 125 MTTTLDLLR 133
            ++ ++LLR
Sbjct: 119 SSSLMELLR 127


>gi|149203129|ref|ZP_01880100.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
 gi|149143675|gb|EDM31711.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
          Length = 130

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 10/127 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKKI 66
           ++ SGL  Q+ R+Q +SENIANA    DTPG   YRRKT+SFE    G   +G V V ++
Sbjct: 10  VSASGLKAQAQRLQHVSENIANA----DTPG---YRRKTVSFEATHAGTGTAGAVTVSRV 62

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            +DQS     +DP HP+A+ +G  +   V++++E AD RE  R Y ANL+   Q   M  
Sbjct: 63  HLDQSAPQRIYDPSHPLADETGHYQGSTVDLMIEIADAREAQRSYEANLKMFDQVRQMSA 122

Query: 127 TTLDLLR 133
             +DLLR
Sbjct: 123 GLMDLLR 129


>gi|114762160|ref|ZP_01441628.1| flagellar basal-body rod protein FlgC [Pelagibaca bermudensis
           HTCC2601]
 gi|114545184|gb|EAU48187.1| flagellar basal-body rod protein FlgC [Roseovarius sp. HTCC2601]
          Length = 130

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/127 (43%), Positives = 81/127 (63%), Gaps = 11/127 (8%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG-- 67
           +++SGL  Q+ R++++SENIAN     DTPG   YRRKT+ FE +  GS GVR  + G  
Sbjct: 10  VSSSGLRAQADRLRVVSENIANV----DTPG---YRRKTLPFE-LGEGSDGVREVQAGDT 61

Query: 68  -VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            +D+S     +DP HP+A+ +G     NV+++VE AD RE  R Y ANL+  +Q+  M +
Sbjct: 62  RLDRSDLERIWDPHHPLADPAGFYDGTNVDLIVELADAREAQRSYEANLKMFEQTRQMSS 121

Query: 127 TTLDLLR 133
           + +DLLR
Sbjct: 122 SLMDLLR 128


>gi|254476330|ref|ZP_05089716.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11]
 gi|214030573|gb|EEB71408.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11]
          Length = 130

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 79/136 (58%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  I+ S L  QS R++ +SENI+NA    DTPG   YRRKT+ FE V   S  
Sbjct: 1   MSEFAKSLSISASALQAQSTRLRHVSENISNA----DTPG---YRRKTVPFEAVRDLSAD 53

Query: 61  VRVKKIG---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    +G   +D+S   + +DP HP+A+ SG  K  NV++++E AD RE  R Y ANL+ 
Sbjct: 54  VEKVSVGPVRLDRSDLEQVYDPSHPLADDSGHYKGSNVDLMIEIADAREAQRSYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
            +Q   M ++ +DLLR
Sbjct: 114 FEQGRQMSSSLMDLLR 129


>gi|99082804|ref|YP_614958.1| flagellar basal body rod protein FlgC [Ruegeria sp. TM1040]
 gi|99039084|gb|ABF65696.1| Flagellar basal-body rod protein flgC [Ruegeria sp. TM1040]
          Length = 130

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 80/130 (61%), Gaps = 10/130 (7%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRV 63
           S  +  SGL  Q+AR+  +SENI+NA    DTPG   YRRKT+SF+ V         VRV
Sbjct: 7   SLSVTASGLRAQAARLTHVSENISNA----DTPG---YRRKTVSFQSVRDLETDVSQVRV 59

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            ++ +D++   + +DP HP+A+ +G  +  NV++++E AD RE  R Y ANL+   Q+  
Sbjct: 60  GRVSLDRTELEQVYDPSHPLADETGHYEGSNVDLMIEIADAREAQRTYEANLKMFDQTRQ 119

Query: 124 MMTTTLDLLR 133
           M ++ +DLLR
Sbjct: 120 MSSSLMDLLR 129


>gi|254463222|ref|ZP_05076638.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
           HTCC2083]
 gi|206679811|gb|EDZ44298.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 126

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 77/120 (64%), Gaps = 8/120 (6%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           GL  QSAR++ +SENIANA    DTPG   Y RK +SF+ +   +G V + ++ +DQS  
Sbjct: 14  GLKAQSARLRHVSENIANA----DTPG---YHRKIVSFD-LSRDTGQVTIGRLSLDQSQL 65

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            E +DP HP+A+A G     NV++++E AD RE  R Y ANL+ + Q+  M ++ ++LLR
Sbjct: 66  REIYDPSHPLADAKGNYDSSNVDLIIEIADAREAQRSYEANLKMLDQTRQMSSSLIELLR 125


>gi|259417635|ref|ZP_05741554.1| flagellar basal-body rod protein FlgC [Silicibacter sp. TrichCH4B]
 gi|259346541|gb|EEW58355.1| flagellar basal-body rod protein FlgC [Silicibacter sp. TrichCH4B]
          Length = 130

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 80/130 (61%), Gaps = 10/130 (7%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRV 63
           S  +  SGL  Q+AR+  +SENI+NA    DTPG   YRRKT+SF+ V         V+V
Sbjct: 7   SLSVTASGLRAQAARLTHVSENISNA----DTPG---YRRKTVSFQAVRDLETDVSQVKV 59

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            ++ +D+S   + +DP HP+A+ +G  +  NV++++E AD RE  R Y ANL+   Q+  
Sbjct: 60  GRVSLDRSELEQVYDPSHPLADETGHYEGSNVDLMIEIADAREAQRTYEANLKMFDQTRQ 119

Query: 124 MMTTTLDLLR 133
           M ++ +DLLR
Sbjct: 120 MSSSLMDLLR 129


>gi|260428875|ref|ZP_05782852.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45]
 gi|260419498|gb|EEX12751.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45]
          Length = 130

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 10/127 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG-- 67
           +++SGL  Q++R++I+SENIAN     DTPG   Y RKTI FE   +   GV++ + G  
Sbjct: 10  VSSSGLRAQASRLRIVSENIANV----DTPG---YHRKTIPFETSGNARDGVQMVETGRV 62

Query: 68  -VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            +D+S     +DP HP+A+ +G     NV+++VE AD RE  R Y ANL+  +Q+  M +
Sbjct: 63  DLDRSDLERIYDPQHPLADEAGFYDGTNVDLIVELADAREAQRSYEANLKMFEQTRQMSS 122

Query: 127 TTLDLLR 133
             LDLLR
Sbjct: 123 NLLDLLR 129


>gi|254511648|ref|ZP_05123715.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
           KLH11]
 gi|221535359|gb|EEE38347.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
           KLH11]
          Length = 128

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 12/131 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-VR 62
           L ASA    S L  Q+AR++ +SENI+NA    DTPG   YRRKT+ FE V  G    V+
Sbjct: 8   LTASA----SALRAQAARLRHVSENISNA----DTPG---YRRKTVPFETVKRGGAELVQ 56

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V  + +D+    + +DPGHP+A+ +G  +  NV++++E AD RE  R Y ANL+   Q+ 
Sbjct: 57  VGHVKLDRRDPGQIYDPGHPMADEAGYYRGSNVDLMIEIADAREAQRSYEANLKMFDQTR 116

Query: 123 DMMTTTLDLLR 133
            M ++ +DLLR
Sbjct: 117 QMSSSLMDLLR 127


>gi|149912830|ref|ZP_01901364.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b]
 gi|149813236|gb|EDM73062.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b]
          Length = 130

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 10/127 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---VRVKKI 66
           ++ SGL  Q+ R++ +SENIANA    DTPG   YRRKT+SFE    G  G   V   ++
Sbjct: 10  VSASGLKAQAQRLRHVSENIANA----DTPG---YRRKTVSFEARAAGMSGVHHVETGRV 62

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            +D+S     ++P HP+A+ +G     NV +++E AD RE  R Y ANL+   Q+  M +
Sbjct: 63  RLDRSDLARVYEPSHPMADETGHFDSSNVQLVIEIADAREAQRSYEANLKMFDQARQMSS 122

Query: 127 TTLDLLR 133
           + +DLLR
Sbjct: 123 SLMDLLR 129


>gi|85706171|ref|ZP_01037266.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217]
 gi|85669335|gb|EAQ24201.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217]
          Length = 130

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 75/127 (59%), Gaps = 10/127 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKKI 66
           ++ SGL  Q+ R+  +SENIANA    DTPG   YRRKT+SFE    GS   G V V ++
Sbjct: 10  VSASGLKAQAQRLVHVSENIANA----DTPG---YRRKTVSFETAFAGSEGTGAVEVSRV 62

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            +D+    + +DP HP+A+ +G  +   V++++E AD RE  R Y ANL+   Q   M  
Sbjct: 63  NLDRRELQKIYDPSHPLADETGHYQGSTVDLMIEIADAREAQRSYEANLKMFDQVRQMSA 122

Query: 127 TTLDLLR 133
             +DLLR
Sbjct: 123 GLMDLLR 129


>gi|312135856|ref|YP_004003194.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           owensensis OL]
 gi|311775907|gb|ADQ05394.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           owensensis OL]
          Length = 145

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 77/139 (55%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------------ 56
           +I++S L  Q  RM +I++NIANA TT  T    PYRRK + FEE               
Sbjct: 6   NISSSALTAQRVRMDVIAQNIANANTTR-TENGQPYRRKIVVFEERKQNFSQILNQKIEQ 64

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                SGGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E +R Y 
Sbjct: 65  IQASSSGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEASRSYE 124

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN+  +  +  M+T T ++
Sbjct: 125 ANVTALNITKSMITRTFEI 143


>gi|312792645|ref|YP_004025568.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179785|gb|ADQ39955.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 147

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 77/139 (55%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----------- 57
           +I++S LA Q  RM +I++NIANA TT  T    PYRRK + FEE               
Sbjct: 8   NISSSALAAQRVRMDVIAQNIANANTT-RTENGQPYRRKVVVFEERKQSFADILTQKIGQ 66

Query: 58  -----SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                 GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E +R Y 
Sbjct: 67  AQSSSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEASRSYE 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN+  +  +  M+T T ++
Sbjct: 127 ANVTALNITKSMITRTFEI 145


>gi|312876494|ref|ZP_07736477.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796705|gb|EFR13051.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 147

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 77/139 (55%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----------- 57
           +I++S LA Q  RM +I++NIANA TT  T    PYRRK + FEE               
Sbjct: 8   NISSSALAAQRVRMDVIAQNIANANTT-RTENGQPYRRKVVVFEERKQSFSDILNQKIGQ 66

Query: 58  -----SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                 GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E +R Y 
Sbjct: 67  AQASSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEASRSYE 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN+  +  +  M+T T ++
Sbjct: 127 ANVTALNITKSMITRTFEI 145


>gi|163738064|ref|ZP_02145480.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
           BS107]
 gi|163742540|ref|ZP_02149926.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
           2.10]
 gi|161384125|gb|EDQ08508.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
           2.10]
 gi|161388680|gb|EDQ13033.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
           BS107]
          Length = 130

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 80/136 (58%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  ++ S L  Q++R++ +SENI+NA    DTPG   YRRKT+ FE V      
Sbjct: 1   MSEFSKSLSVSASALKAQASRLRHVSENISNA----DTPG---YRRKTVPFEAVRDLRSD 53

Query: 61  VRVKKIG---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   ++G   +D+S   + FDP HP+A+ SG  +  NV++++E AD RE  R Y ANL+ 
Sbjct: 54  VEKVEVGPVRLDRSDLEQVFDPSHPLADESGHYEGSNVDLMIEIADAREAQRSYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
            +Q   M ++ +DLLR
Sbjct: 114 FEQGRQMSSSLMDLLR 129


>gi|126734103|ref|ZP_01749850.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2]
 gi|126716969|gb|EBA13833.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2]
          Length = 130

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 75/127 (59%), Gaps = 10/127 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGVRVKKI 66
           +A SG+  Q++R++ +SENIAN     DTPG   YRRK I+FEE++     +G V    +
Sbjct: 10  VATSGMKAQASRLRHVSENIANT----DTPG---YRRKAITFEELVTQGRTTGAVETGPL 62

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            +DQ+     +DP HP+A+ +G     NVN+L+E AD RE  R Y ANL+   Q   M +
Sbjct: 63  RLDQTELKRVYDPSHPLADDTGHYNGSNVNLLIEIADAREAQRSYEANLKMFDQVRQMSS 122

Query: 127 TTLDLLR 133
              DLLR
Sbjct: 123 ALNDLLR 129


>gi|222530141|ref|YP_002574023.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222456988|gb|ACM61250.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 145

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------------VMH 56
           +I++S L+ Q  RM +I++NIANA TT  T    PYRRK + FEE            +  
Sbjct: 6   NISSSALSAQRVRMDVIAQNIANANTT-RTENGQPYRRKVVVFEERKLSFANILSQKIGE 64

Query: 57  GS----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
           G+    GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E +R Y 
Sbjct: 65  GTTSFYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEASRSYE 124

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN+  +  +  M+T T ++
Sbjct: 125 ANVTALNITKSMITRTFEI 143


>gi|160903121|ref|YP_001568702.1| flagellar basal-body rod protein FlgC [Petrotoga mobilis SJ95]
 gi|160360765|gb|ABX32379.1| flagellar basal-body rod protein FlgC [Petrotoga mobilis SJ95]
          Length = 140

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/140 (40%), Positives = 73/140 (52%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD L     IA SG+  +  R+ +IS+N+AN+ TT    G  PYRRK + F+E +  S  
Sbjct: 2   MDGLFKVLDIAASGMTAERFRLDVISQNLANSDTTRTEEGG-PYRRKAVIFQEALSESTN 60

Query: 59  -----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                GGV+V  I  D S F   +DP HP A+A G V YPNVNVL E  DM    R Y  
Sbjct: 61  GDRNFGGVKVSSIVEDPSPFRLVYDPNHPDADAEGYVSYPNVNVLREMVDMMSAQRAYEM 120

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           N   +  +  M  + L + R
Sbjct: 121 NAAVVNSAKSMYNSALGIGR 140


>gi|312621566|ref|YP_004023179.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202033|gb|ADQ45360.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 145

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----------- 57
           +I++S L+ Q  RM +I++NIANA TT  T    PYRRK + FEE               
Sbjct: 6   NISSSALSAQRVRMDVIAQNIANANTTR-TENGQPYRRKVVVFEESKQSFADILSQKIGK 64

Query: 58  -----SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                 GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E +R Y 
Sbjct: 65  DQTSSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEASRSYE 124

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN+  +  +  M+T T ++
Sbjct: 125 ANVTALNITKSMITRTFEI 143


>gi|312126817|ref|YP_003991691.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776836|gb|ADQ06322.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 147

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 76/139 (54%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----------- 57
           +I++S L  Q  RM +I++NIANA TT  T    PYRRK + FEE               
Sbjct: 8   NISSSALTAQRVRMDVIAQNIANANTT-KTENGQPYRRKVVVFEERRQSFAEILSQKIGQ 66

Query: 58  -----SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                 GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E +R Y 
Sbjct: 67  AQASSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEASRSYE 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN+  +  +  M+T T ++
Sbjct: 127 ANVTALNITKSMITRTFEI 145


>gi|302872573|ref|YP_003841209.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575432|gb|ADL43223.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 145

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 76/139 (54%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----------- 57
           +I++S L  Q  RM +I++NIANA TT    G  PYRRK + FEE               
Sbjct: 6   NISSSALTAQRVRMDVIAQNIANANTTRTESGQ-PYRRKIVVFEERKQSFADILTQKIGE 64

Query: 58  -----SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                 GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E +R Y 
Sbjct: 65  AANSYYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEASRSYE 124

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN+  +  +  M+T T ++
Sbjct: 125 ANVTALNITKSMITRTFEI 143


>gi|254466614|ref|ZP_05080025.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
           Y4I]
 gi|206687522|gb|EDZ48004.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
           Y4I]
          Length = 130

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 10/127 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGGVRVKKI 66
           +  SGL  Q+AR++ +SENI+NA    DTPG   YRRK + FE   E+      VR  ++
Sbjct: 10  VTASGLKAQAARLRHVSENISNA----DTPG---YRRKAVPFESVRELRTDVEHVRTGRV 62

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            +D+S   + +DP HP+A+ SG  +  NV++++E AD RE  R Y ANL+  +Q+  M  
Sbjct: 63  TLDRSELEKVYDPSHPLADESGHFEGSNVDLMIEIADAREAQRSYEANLKMFEQTRSMSA 122

Query: 127 TTLDLLR 133
           + ++LLR
Sbjct: 123 SLMELLR 129


>gi|220929470|ref|YP_002506379.1| flagellar basal-body rod protein FlgC [Clostridium cellulolyticum
           H10]
 gi|219999798|gb|ACL76399.1| flagellar basal-body rod protein FlgC [Clostridium cellulolyticum
           H10]
          Length = 147

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 77/144 (53%), Gaps = 17/144 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           + ++  I+ SGL  Q  RM  IS+NIANA TT  T G+ PYRR+ + FEE          
Sbjct: 3   IFSALDISASGLTAQRVRMDTISQNIANANTTRTTDGT-PYRRRDVVFEERTDSNSFSRT 61

Query: 54  ------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  ++G  GVRV  I  D + F + FDPGHP A+A G V  PNV+++ E  +M   
Sbjct: 62  LENASSKLNGGNGVRVSSIVEDPTEFKKVFDPGHPDADAEGYVNMPNVDIVTEMVNMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y AN+ ++  +  M    L++
Sbjct: 122 TRSYEANVTSVNATKSMALKALEI 145


>gi|206890290|ref|YP_002248113.1| flagellar basal-body rod protein FlgC [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742228|gb|ACI21285.1| flagellar basal-body rod protein FlgC [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 135

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 73/126 (57%), Gaps = 3/126 (2%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVKKIG 67
           ++ +GL  Q  R+ +I+ N+AN  +T  TP   PYRRK + F   M+   S GV V++I 
Sbjct: 10  VSATGLEAQKIRLNVIASNLANINSTK-TPEGGPYRRKDVLFTTYMYDQISQGVDVQRIV 68

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            DQ  F   ++P HP A+ +G VKYPNVN + E  ++   +R Y ANL  I    DM   
Sbjct: 69  EDQRPFRIVYEPSHPDADKNGYVKYPNVNPMEEMINLISASRAYEANLTMINSYKDMFMR 128

Query: 128 TLDLLR 133
           TLDLL+
Sbjct: 129 TLDLLK 134


>gi|297617136|ref|YP_003702295.1| flagellar basal-body rod protein FlgC [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144973|gb|ADI01730.1| flagellar basal-body rod protein FlgC [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 145

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 71/138 (51%), Gaps = 15/138 (10%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE--------------VM 55
           I+ SG+  Q  RM +IS N+AN  TT  TP   PYRR+ + FE                M
Sbjct: 9   ISASGMTAQRLRMDVISNNLANVNTT-RTPQGGPYRRQMVIFEARTPSKGNFKDLLSAYM 67

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
            G GGVRVK I  D S F   +DPG+P A+  G V  PNVNV+ E  DM    R Y AN+
Sbjct: 68  EGEGGVRVKAIREDTSPFKRVYDPGNPDADQDGYVNMPNVNVVSEMVDMISATRAYEANV 127

Query: 116 QTIKQSHDMMTTTLDLLR 133
             ++ +  M    L++ R
Sbjct: 128 SAVEATKSMAMKALEIGR 145


>gi|126697817|ref|YP_001086714.1| flagellar basal-body rod protein [Clostridium difficile 630]
 gi|254973910|ref|ZP_05270382.1| flagellar basal-body rod protein [Clostridium difficile QCD-66c26]
 gi|255091296|ref|ZP_05320774.1| flagellar basal-body rod protein [Clostridium difficile CIP 107932]
 gi|255305270|ref|ZP_05349442.1| flagellar basal-body rod protein [Clostridium difficile ATCC 43255]
 gi|255312954|ref|ZP_05354537.1| flagellar basal-body rod protein [Clostridium difficile QCD-76w55]
 gi|255515713|ref|ZP_05383389.1| flagellar basal-body rod protein [Clostridium difficile QCD-97b34]
 gi|255648807|ref|ZP_05395709.1| flagellar basal-body rod protein [Clostridium difficile QCD-37x79]
 gi|306518922|ref|ZP_07405269.1| flagellar basal body rod protein FlgC [Clostridium difficile
           QCD-32g58]
 gi|115249254|emb|CAJ67067.1| Flagellar basal-body rod protein FlgC [Clostridium difficile]
          Length = 134

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGG 60
           + +   I+ SGL  +S +M IIS N+AN   T   P  + YRRK +SFEE      G  G
Sbjct: 3   VFSGMRISASGLTAESLKMDIISSNVANINAT-RGPNGEAYRRKVVSFEENYDNKLGMLG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +  D+S   E +DP HP A  +G V+YPNVN+LVE  D+   +R Y +N+ T+  
Sbjct: 62  VKVTSVEDDKSPLKEVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLNA 121

Query: 121 SHDMMTTTLDL 131
              M++  L++
Sbjct: 122 QKSMISKALEI 132


>gi|260682026|ref|YP_003213311.1| flagellar basal-body rod protein [Clostridium difficile CD196]
 gi|260685624|ref|YP_003216757.1| flagellar basal-body rod protein [Clostridium difficile R20291]
 gi|260208189|emb|CBA60524.1| flagellar basal-body rod protein [Clostridium difficile CD196]
 gi|260211640|emb|CBE01891.1| flagellar basal-body rod protein [Clostridium difficile R20291]
          Length = 128

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 73/126 (57%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRVKK 65
            I+ SGL  +S +M IIS N+AN   T   P  + YRRK +SFEE      G  GV+V  
Sbjct: 2   RISASGLTAESLKMDIISSNVANINAT-RGPNGEAYRRKVVSFEENYDNKLGMLGVKVTS 60

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D+S   E +DP HP A  +G V+YPNVN+LVE  D+   +R Y +N+ T+     M+
Sbjct: 61  VEDDKSPLKEVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQKSMI 120

Query: 126 TTTLDL 131
           +  L++
Sbjct: 121 SKALEI 126


>gi|254485520|ref|ZP_05098725.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101]
 gi|214042389|gb|EEB83027.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101]
          Length = 130

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 77/127 (60%), Gaps = 10/127 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRVKKI 66
           +++SGL  Q+ R++ +SENI+NA    DTPG   YRRK +SF+           V+  K+
Sbjct: 10  VSSSGLRAQANRLRHLSENISNA----DTPG---YRRKLVSFQTAFSLGDAPAKVQTGKV 62

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            +DQ+   + +DP HP+A+ +G     NVN+L+E AD +E  R Y ANL+  +Q+  M +
Sbjct: 63  HLDQTALEKVYDPAHPLADDTGQYDGSNVNLLIELADAKEAQRSYEANLKMFEQTRKMSS 122

Query: 127 TTLDLLR 133
             +DLLR
Sbjct: 123 GLMDLLR 129


>gi|126463750|ref|YP_001044864.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17029]
 gi|332559806|ref|ZP_08414128.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides
           WS8N]
 gi|126105414|gb|ABN78092.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|332277518|gb|EGJ22833.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides
           WS8N]
          Length = 126

 Score = 93.2 bits (230), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 77/130 (59%), Gaps = 8/130 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L+ S  ++ SG+  Q+ R++ +SENIANA    DTPG   Y RKT+SF+E    SG V  
Sbjct: 4   LLQSLGLSASGMRSQALRLRHVSENIANA----DTPG---YHRKTVSFQED-PDSGLVST 55

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             + +D+S   + + PGHP+A   G     NV+++VE AD RE  R Y ANL+   Q+  
Sbjct: 56  GPVRLDRSELQKIYAPGHPLAGEDGYYDGSNVDLVVEVADAREAQRSYEANLRMFDQARQ 115

Query: 124 MMTTTLDLLR 133
           M  + LDLLR
Sbjct: 116 MTQSLLDLLR 125


>gi|121533765|ref|ZP_01665592.1| flagellar basal-body rod protein FlgC [Thermosinus carboxydivorans
           Nor1]
 gi|121307756|gb|EAX48671.1| flagellar basal-body rod protein FlgC [Thermosinus carboxydivorans
           Nor1]
          Length = 143

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 76/142 (53%), Gaps = 13/142 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SFEEV 54
           L  +   A SG+  +  RM +IS NIANA TT  TP   PYRR+ +         SF ++
Sbjct: 3   LFTAIDAAASGMTAERLRMDVISNNIANANTT-RTPEGGPYRRQMVIFQPRAGQNSFADL 61

Query: 55  MHG---SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           + G   + GVRV  I  D++ F + FDP HP ANA+G V  PNVN++ E  DM    R Y
Sbjct: 62  LSGKVENVGVRVVGIVKDEAPFRQVFDPNHPDANAAGYVAMPNVNIIAEMVDMMTAARAY 121

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I  +  M    L++ R
Sbjct: 122 EANVTAINAAKSMALKALEIGR 143


>gi|114797235|ref|YP_759001.1| flagellar basal-body rod protein [Hyphomonas neptunium ATCC 15444]
 gi|114737409|gb|ABI75534.1| flagellar basal-body rod protein [Hyphomonas neptunium ATCC 15444]
          Length = 128

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 8/134 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M+ L A+   A +G+ +QS RM + +ENI+NA    DTPG   Y+RK +  E+    SG 
Sbjct: 1   MNPLKATQQQAVAGMELQSRRMGVTAENISNA----DTPG---YKRKLLMVEQSQLSSGE 53

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                ++ +D++    +++P HP+A+  G V   NV+++ E ADMRE NR Y ANL + +
Sbjct: 54  QFMASRVQLDEAEAKRDYNPEHPMADGEGYVTLSNVSIVTEMADMREANRSYEANLNSFQ 113

Query: 120 QSHDMMTTTLDLLR 133
           Q+  M  + LD+LR
Sbjct: 114 QARSMYRSLLDILR 127


>gi|291278935|ref|YP_003495770.1| flagellar basal-body rod protein FlgC [Deferribacter desulfuricans
           SSM1]
 gi|290753637|dbj|BAI80014.1| flagellar basal-body rod protein FlgC [Deferribacter desulfuricans
           SSM1]
          Length = 134

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 77/127 (60%), Gaps = 3/127 (2%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGVRVKKI 66
            IA++GL+ Q  R+ +IS N+ANA TT    G+ PY+++ + F  ++ G   GGVRV+K+
Sbjct: 8   KIASTGLSAQRIRINVISSNLANANTTRTEDGT-PYQKREVIFRTILDGELRGGVRVEKV 66

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D+   + +++PGHP AN  G V YPN+N + E  +M E +R Y AN+  +  +  +  
Sbjct: 67  VRDEKPPILKYEPGHPDANEEGYVAYPNINPIEEMVNMLEASRSYEANVTVLNTAKQLAL 126

Query: 127 TTLDLLR 133
             L++ R
Sbjct: 127 KALEIGR 133


>gi|289578436|ref|YP_003477063.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter italicus
           Ab9]
 gi|297544712|ref|YP_003677014.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528149|gb|ADD02501.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter italicus
           Ab9]
 gi|296842487|gb|ADH61003.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 147

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 78/145 (53%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVM 55
           L +S  I+ SGL  +  RM +IS+NIAN  TT  + G  PYRRK +        SFE ++
Sbjct: 3   LFSSMDISASGLTAERVRMDVISQNIANVNTTRTSQGG-PYRRKLVVLKEIQPDSFESIL 61

Query: 56  ------HGSGGVRVKKIGVDQSTFVEE-FDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   GV V +I  D  T + E +DPGHP A+ +G V+YPNVN++ E  DM    
Sbjct: 62  DKVKGKYSGKGVEVVQIAEDDQTPLREVYDPGHPDADQNGYVEYPNVNIVSEMVDMISAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+     S  M   +L++ R
Sbjct: 122 RAYEANVTAFNASKAMFQKSLEIGR 146


>gi|255099413|ref|ZP_05328390.1| flagellar basal-body rod protein [Clostridium difficile QCD-63q42]
          Length = 134

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGG 60
           + +   I+ SGL  +S +M IIS N+AN   T   P  + YRRK +SFEE      G  G
Sbjct: 3   VFSGMRISASGLTAESLKMDIISSNVANINAT-RGPNGEAYRRKVVSFEENYDNKLGMLG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +  D+S   + +DP HP A  +G V+YPNVN+LVE  D+   +R Y +N+ T+  
Sbjct: 62  VKVTSVEDDKSPLKKVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLNA 121

Query: 121 SHDMMTTTLDL 131
              M++  L++
Sbjct: 122 QKSMISKALEI 132


>gi|77464908|ref|YP_354412.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
           2.4.1]
 gi|221640829|ref|YP_002527091.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
           KD131]
 gi|77389326|gb|ABA80511.1| putative flagellar basal-body rod protein FlgC [Rhodobacter
           sphaeroides 2.4.1]
 gi|221161610|gb|ACM02590.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
           KD131]
          Length = 128

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 77/130 (59%), Gaps = 8/130 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L+ S  ++ SG+  Q+ R++ +SENIANA    DTPG   Y RKT+SF+E    SG V  
Sbjct: 6   LLQSLGLSASGMRSQALRLRHVSENIANA----DTPG---YHRKTVSFQED-PDSGLVST 57

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             + +D+S   + + PGHP+A   G     NV+++VE AD RE  R Y ANL+   Q+  
Sbjct: 58  GPVRLDRSELQKIYAPGHPLAGEDGYYDGSNVDLVVEIADAREAQRSYEANLRMFDQARQ 117

Query: 124 MMTTTLDLLR 133
           M  + LDLLR
Sbjct: 118 MTQSLLDLLR 127


>gi|294679035|ref|YP_003579650.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB
           1003]
 gi|294477855|gb|ADE87243.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB
           1003]
          Length = 131

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 11/128 (8%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----GSGGVRVKK 65
           ++ SGL  QS R++ +SENIANA    DTPG   Y RK + FEE+      G+ GV +  
Sbjct: 10  VSASGLKAQSMRLRHVSENIANA----DTPG---YHRKVVRFEELAAQKDGGATGVELGP 62

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           + +DQ      +DPG P+A+ +G     NV+++VE AD R+  R Y ANL+   Q+  M 
Sbjct: 63  VELDQKELARIYDPGSPLADENGYYDGSNVDLVVEIADARQAQRSYEANLRMFDQTRQMS 122

Query: 126 TTTLDLLR 133
           +  ++LLR
Sbjct: 123 SALMELLR 130


>gi|309388815|gb|ADO76695.1| flagellar basal-body rod protein FlgC [Halanaerobium praevalens DSM
           2228]
          Length = 143

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/136 (43%), Positives = 73/136 (53%), Gaps = 15/136 (11%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----------EVMHGS- 58
           I+ SGL  Q  RM  IS NIANA TT D  G + YRRKT  F           EV +GS 
Sbjct: 7   ISASGLTAQRLRMDTISSNIANAETTRDENG-NTYRRKTPIFRQKLENKMGAAEVGNGSS 65

Query: 59  ---GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
              GGV V +I  DQS F  E+ P HP AN  G V+ PNV+V+ E  +M + +R Y AN 
Sbjct: 66  LNSGGVEVDQIAEDQSPFRLEYRPNHPDANEEGYVELPNVSVMTEMVNMIDASRAYEANT 125

Query: 116 QTIKQSHDMMTTTLDL 131
           Q I     M  + L++
Sbjct: 126 QAISNYKSMANSALNI 141


>gi|323698500|ref|ZP_08110412.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. ND132]
 gi|323458432|gb|EGB14297.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           ND132]
          Length = 145

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 81/145 (55%), Gaps = 16/145 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------- 52
           MD++ A   I+ SGL  Q A++ +IS N+AN RTT +T G  PY+RKT+SFE        
Sbjct: 1   MDFMTA-LDISASGLTAQRAQLNVISMNMANMRTT-ETAGGGPYQRKTVSFEATPVYSPF 58

Query: 53  ------EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                 ++     GV+V  +  D   F + ++P HP AN  G V YP++NV+ E A+M +
Sbjct: 59  DQAMQDQLNRNLEGVKVTGVLADNRPFKQVYEPNHPDANDQGYVFYPDINVVEEMANMMQ 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R Y AN+QT++   +M    L +
Sbjct: 119 AMRGYEANVQTVQAVKNMFQKALTI 143


>gi|117923583|ref|YP_864200.1| flagellar basal-body rod protein FlgC [Magnetococcus sp. MC-1]
 gi|117607339|gb|ABK42794.1| flagellar basal-body rod protein FlgC [Magnetococcus sp. MC-1]
          Length = 141

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 12/143 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           MD+L  S  +  SGLA Q  RM IISEN+ANA+TT  TP   PY+R+   F         
Sbjct: 1   MDFLT-SFKVTASGLAAQRLRMNIISENVANAQTT-RTPEGGPYKRRDPVFMSRPFQDYL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
             E   G+ GV V ++ VD      ++DP HP ANA G V  PN++V+ E  +M   +R 
Sbjct: 59  TREESAGATGVAVDRVNVDHRPPRLQYDPNHPDANADGYVAMPNIDVMTEMVNMMSASRS 118

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y AN+  +  S  M    L++ R
Sbjct: 119 YEANVSVLNASKQMALKALEIGR 141


>gi|159045788|ref|YP_001534582.1| flagellar basal body rod protein FlgC [Dinoroseobacter shibae DFL
           12]
 gi|157913548|gb|ABV94981.1| flagellar basal-body rod protein FlgC [Dinoroseobacter shibae DFL
           12]
          Length = 130

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 78/133 (58%), Gaps = 10/133 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGG 60
           L+ S  ++ SGL  Q+ R+ ++S+NIAN     DTPG   Y+RK   F+++     G+ G
Sbjct: 4   LLKSMTVSASGLMAQAQRLNVVSQNIANV----DTPG---YQRKQAEFQQMFDTFDGTDG 56

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V ++ +D S     +DP HP+A+ +G  +  NV+ +VE AD RE  R Y ANL++   
Sbjct: 57  VAVLRVSLDDSALKRIYDPSHPLADPTGYYEGSNVSTMVEVADAREAQRSYEANLRSFDN 116

Query: 121 SHDMMTTTLDLLR 133
           +  M  + L+LL+
Sbjct: 117 ARQMSRSLLELLK 129


>gi|296133051|ref|YP_003640298.1| flagellar basal-body rod protein FlgC [Thermincola sp. JR]
 gi|296031629|gb|ADG82397.1| flagellar basal-body rod protein FlgC [Thermincola potens JR]
          Length = 145

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 74/144 (51%), Gaps = 15/144 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----------- 52
           +  S  I+ SGL  Q  RM +ISENIAN  TT    G  PYRRK   FE           
Sbjct: 3   MFDSFDISASGLTAQRLRMDLISENIANVNTTRTASGG-PYRRKLAVFEAKNGDFDKVFQ 61

Query: 53  ---EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
              + +    GVRV KI  DQS     ++P HP ANA G V+ PNVN++ E  DM    R
Sbjct: 62  ERLDSVSPGKGVRVTKIIEDQSPLKLVYNPNHPDANAQGYVEMPNVNIVTEMVDMISATR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+ +I+ + +M    +++ R
Sbjct: 122 AYEANVASIRATKEMFAKAMEIGR 145


>gi|182418356|ref|ZP_02949651.1| flagellar basal-body rod protein FlgC [Clostridium butyricum 5521]
 gi|237666561|ref|ZP_04526546.1| flagellar basal-body rod protein FlgC [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182377738|gb|EDT75282.1| flagellar basal-body rod protein FlgC [Clostridium butyricum 5521]
 gi|237657760|gb|EEP55315.1| flagellar basal-body rod protein FlgC [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 135

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 3/128 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRV 63
           S  I+ +GL+ +  RM  I+ N++NARTT    GS PY R+   F+E +  +    GV+ 
Sbjct: 6   SMQISATGLSAERLRMDTITSNMSNARTTRSADGSGPYVRRIAVFQEALDANKEMAGVKA 65

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            KI  D S   +E++P HP A+ +G V  PNVNVL E ADM    R Y AN+ T      
Sbjct: 66  VKIEKDNSPLRKEYNPNHPDADENGYVTMPNVNVLNEMADMMVATRSYEANVDTFNALKS 125

Query: 124 MMTTTLDL 131
           M +  L++
Sbjct: 126 MFSKALEI 133


>gi|225181613|ref|ZP_03735054.1| flagellar basal-body rod protein FlgC [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167721|gb|EEG76531.1| flagellar basal-body rod protein FlgC [Dethiobacter alkaliphilus
           AHT 1]
          Length = 136

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 5/134 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SG- 59
           +  + ++++SGL  +  R+ +I+ NIANA TT    G  PY+RK+  F EVM G   SG 
Sbjct: 3   IFKAMNVSSSGLTAERFRLDLIANNIANAHTTRTEDGG-PYQRKSAVFAEVMDGARKSGQ 61

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV+ + VD +     ++P HP AN  G V YPNVN++ E  DM    R Y AN+  + 
Sbjct: 62  GVRVQGVSVDNTEPRLVYEPEHPDANEEGYVAYPNVNIVQEMVDMITATRAYEANVTALN 121

Query: 120 QSHDMMTTTLDLLR 133
            S +M    L++ R
Sbjct: 122 ASKNMFLKALEIGR 135


>gi|326204628|ref|ZP_08194484.1| flagellar basal-body rod protein FlgC [Clostridium papyrosolvens
           DSM 2782]
 gi|325985195|gb|EGD46035.1| flagellar basal-body rod protein FlgC [Clostridium papyrosolvens
           DSM 2782]
          Length = 147

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 17/144 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           + ++  I+ SGL  Q  RM  IS+NIANA TT    G+ PYRR+ + FEE          
Sbjct: 3   IFSALDISASGLTAQRVRMDTISQNIANANTTRTADGT-PYRRREVVFEERSDSNSFSQA 61

Query: 54  ------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  ++G  GVRV  I  D + F + +DPGHP A+A G V  PNV+++ E  +M   
Sbjct: 62  LENASSKLNGGNGVRVSSIVEDPTDFKKVYDPGHPDADAEGYVNMPNVDIVTEMVNMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y AN+ ++  +  M    L++
Sbjct: 122 TRSYEANVTSVNATKSMALKALEI 145


>gi|126738582|ref|ZP_01754287.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6]
 gi|126720381|gb|EBA17087.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6]
          Length = 130

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 80/136 (58%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHG 57
           M     S ++  SGL  Q+ R++ +SENI+NA    DTPG   YRRKT+ F    E+ + 
Sbjct: 1   MSEFANSLNVTASGLKAQAKRLRHVSENISNA----DTPG---YRRKTVPFLAVRELQND 53

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V   ++ +D++     +DP HP+A+ +G  +  NV++++E AD RE  R Y ANL+ 
Sbjct: 54  AEKVETGRVTLDRTELTNIYDPTHPMADDTGHYEGSNVDLMIEIADAREAQRSYDANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
            +Q+  M  + +DLLR
Sbjct: 114 FEQTRSMSASLMDLLR 129


>gi|150021011|ref|YP_001306365.1| flagellar basal-body rod protein FlgC [Thermosipho melanesiensis
           BI429]
 gi|149793532|gb|ABR30980.1| flagellar basal-body rod protein FlgC [Thermosipho melanesiensis
           BI429]
          Length = 137

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 7/130 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------SGGVRV 63
           IA +G++ Q  R+ +I+ N+AN+ TT    G +PYRRK   F+E++        +GGV V
Sbjct: 9   IAATGMSAQRLRIDVITNNLANSETTRTEKG-EPYRRKVPVFQELLRNVRGRLENGGVVV 67

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           K+I  DQS F   +DP HP A+ +G VK PNVNV+ E  DM    R Y AN+     +  
Sbjct: 68  KEIYEDQSPFRVVYDPTHPDADENGYVKLPNVNVVREMVDMINAQRAYEANVTAFNTTKA 127

Query: 124 MMTTTLDLLR 133
           M+ + L + R
Sbjct: 128 MINSALQIGR 137


>gi|167037671|ref|YP_001665249.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040332|ref|YP_001663317.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X514]
 gi|256750738|ref|ZP_05491623.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300914416|ref|ZP_07131732.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X561]
 gi|307264864|ref|ZP_07546426.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|307724348|ref|YP_003904099.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X513]
 gi|320116086|ref|YP_004186245.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|326389485|ref|ZP_08211052.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus JW 200]
 gi|166854572|gb|ABY92981.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X514]
 gi|166856505|gb|ABY94913.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256750321|gb|EEU63340.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300889351|gb|EFK84497.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X561]
 gi|306920122|gb|EFN50334.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|307581409|gb|ADN54808.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X513]
 gi|319929177|gb|ADV79862.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|325994490|gb|EGD52915.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 147

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 77/145 (53%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVM 55
           L +S  I+ SGL  +  RM II++NIAN  TT    G  PYRRK +        SFE ++
Sbjct: 3   LFSSMDISASGLTAERLRMDIIAQNIANVNTTRTVQGG-PYRRKLVVLKEIQPDSFESIL 61

Query: 56  ------HGSGGVRVKKIGVDQSTFVEE-FDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   GV V +I  D  T + E +DPGHP A+ +G V+YPNVN++ E  DM    
Sbjct: 62  DKVKGKYSGKGVEVVQIAEDDQTPLREVYDPGHPDADQNGYVEYPNVNIVSEMVDMISAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+     S  M   +L++ R
Sbjct: 122 RAYEANVTAFNASKAMFQKSLEIGR 146


>gi|317133491|ref|YP_004092805.1| flagellar basal-body rod protein FlgC [Ethanoligenens harbinense
           YUAN-3]
 gi|315471470|gb|ADU28074.1| flagellar basal-body rod protein FlgC [Ethanoligenens harbinense
           YUAN-3]
          Length = 143

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
            + + +I  SGL  Q  RM +ISEN+AN  TT +T    PY+RKT+SF E          
Sbjct: 2   FLNALNIPGSGLTAQRLRMDVISENLANQDTT-ETADGGPYQRKTVSFSERTQPTFDGYL 60

Query: 54  ---VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                 G GGV+V  I  D S F   +DP +P A A G V+ PNV+ + E  D+ E++R 
Sbjct: 61  AGATGEGPGGVQVDAIETDSSDFKLSYDPTNPNAGADGYVRLPNVDTVTEMTDLMESSRS 120

Query: 111 YMANLQTIKQSHDMMTTTLDL 131
           Y A++        M  ++LD+
Sbjct: 121 YSADVTAFNALKGMAVSSLDI 141


>gi|86139479|ref|ZP_01058048.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193]
 gi|85823982|gb|EAQ44188.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193]
          Length = 130

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 10/130 (7%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVK- 64
           S  +  SGL  Q+ R++ +SENI+NA    DTPG   YRRK++ FE        V RVK 
Sbjct: 7   SLSVTASGLKAQATRLRHVSENISNA----DTPG---YRRKSVPFEAARDLENDVERVKT 59

Query: 65  -KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            ++ +D+S     +DP HP+A+ SG  +  NV++++E AD RE  R Y ANL+  +Q+  
Sbjct: 60  GRVVLDRSDLENVYDPSHPLADESGHYEGSNVDLMIEIADAREAQRSYDANLKMFEQTRG 119

Query: 124 MMTTTLDLLR 133
           M  + +DLLR
Sbjct: 120 MSASLMDLLR 129


>gi|217077497|ref|YP_002335215.1| flagellar basal-body rod protein FlgC [Thermosipho africanus
           TCF52B]
 gi|217037352|gb|ACJ75874.1| flagellar basal-body rod protein FlgC [Thermosipho africanus
           TCF52B]
          Length = 137

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 7/130 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------SGGVRV 63
           I+ +G++ Q  R+ +IS N+AN+ TT  T   +PYRRK   F+E++        +GGV V
Sbjct: 9   ISATGMSAQRLRIDVISNNLANSETT-RTENGEPYRRKVPVFQELLRNINGRLENGGVVV 67

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           KKI  D+S F   +DP HP A+ +G VK PNVNV+ E  DM    R Y AN+     +  
Sbjct: 68  KKIYEDKSPFRIVYDPTHPDADENGYVKLPNVNVVREMVDMINAQRAYEANVTAFNTTKA 127

Query: 124 MMTTTLDLLR 133
           M+ + L + R
Sbjct: 128 MINSALQIGR 137


>gi|146296278|ref|YP_001180049.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409854|gb|ABP66858.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 146

 Score = 90.5 bits (223), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 16/138 (11%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--------- 59
           +I+ S L  Q  RM +I++NIANA TT    G+ PYRRK + FEE     G         
Sbjct: 8   NISASALHAQRVRMDVIAQNIANANTTRTEDGT-PYRRKIVVFEERKQSFGDILNEKLNA 66

Query: 60  ------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                 GVRVK I  D S F + +DP HP ++ +G V YPNV+++ E  +M E +R Y A
Sbjct: 67  SSDTYAGVRVKAIIEDTSPFKKVYDPTHPDSDQNGYVNYPNVDIVTEMVNMIEASRAYEA 126

Query: 114 NLQTIKQSHDMMTTTLDL 131
           N+  +  +  M+T   ++
Sbjct: 127 NVTAMNITKSMITRIFEI 144


>gi|89056688|ref|YP_512139.1| flagellar basal body rod protein FlgC [Jannaschia sp. CCS1]
 gi|88866237|gb|ABD57114.1| flagellar basal-body rod protein FlgC [Jannaschia sp. CCS1]
          Length = 130

 Score = 90.1 bits (222), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 75/128 (58%), Gaps = 12/128 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----SGGVRVKK 65
           +A SG+  Q+ R+  +SENIANA    DTPG   Y+RK  SFE V  G     G VR   
Sbjct: 10  VAASGMRAQTQRLTHVSENIANA----DTPG---YQRKITSFE-VERGFSAVEGQVRTGP 61

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           + +DQ+     FDP HP+A+ +G  +  NV++++E AD RE NR Y ANL+   Q   M 
Sbjct: 62  VRLDQTALPVIFDPSHPMADEAGSYEGSNVDLVIELADAREANRSYEANLRIFDQIRQMS 121

Query: 126 TTTLDLLR 133
           ++  DLLR
Sbjct: 122 SSLNDLLR 129


>gi|126730138|ref|ZP_01745950.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37]
 gi|126709518|gb|EBA08572.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37]
          Length = 129

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 9/126 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK--KIG 67
           + + GL  Q+AR++++SENIAN     DTPG   YRRK ++F      S   RV+  ++ 
Sbjct: 10  VTSGGLTSQAARLRVVSENIANV----DTPG---YRRKQLNFAVTRGDSSLARVEPGRMD 62

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           + ++   E +DP HP+A+ +G     NV++++E AD RE  R Y ANL+   Q+  M + 
Sbjct: 63  LSRTPLEEVYDPSHPLADETGKYLGSNVDLMIELADAREAQRSYEANLKMFDQTRQMSSA 122

Query: 128 TLDLLR 133
            LDLLR
Sbjct: 123 LLDLLR 128


>gi|302389656|ref|YP_003825477.1| flagellar basal-body rod protein FlgC [Thermosediminibacter oceani
           DSM 16646]
 gi|302200284|gb|ADL07854.1| flagellar basal-body rod protein FlgC [Thermosediminibacter oceani
           DSM 16646]
          Length = 147

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 71/145 (48%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           +  S  I+ SGL  Q  RM +IS NIAN  TT    G  PYRR+ + F+E   G      
Sbjct: 3   IFRSLEISASGLTAQRLRMDVISNNIANVNTTRTEEGG-PYRRQRVIFQERKRGLTFKDV 61

Query: 58  ---------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GVRV  I  D S F   +DP HP A+  G V+ PNVN++ E  DM    
Sbjct: 62  ISGMSSTQPGAGVRVVSIEKDPSPFKLVYDPSHPDADQMGYVRMPNVNIVTEMVDMISAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  I  +  M+T  L++ R
Sbjct: 122 RSYEANITAINSAKGMITKALEIGR 146


>gi|154250382|ref|YP_001411207.1| flagellar basal-body rod protein FlgC [Fervidobacterium nodosum
           Rt17-B1]
 gi|154154318|gb|ABS61550.1| flagellar basal-body rod protein FlgC [Fervidobacterium nodosum
           Rt17-B1]
          Length = 138

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 73/131 (55%), Gaps = 7/131 (5%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------SGGVR 62
           +I+ +GL+ Q  R+++IS NIAN+ TT  T    PYRRK   F+EV+        +GGV 
Sbjct: 9   NISATGLSAQRFRIEVISTNIANSETT-RTENGGPYRRKVPVFQEVLRNIKGNQENGGVM 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           VK I  D S +   +DP HP A+ +G VK PNVN++ E  DM    R Y AN   I  + 
Sbjct: 68  VKSIYEDPSEYRIVYDPTHPDADENGYVKLPNVNIVREMVDMINAQRAYEANATAINTTK 127

Query: 123 DMMTTTLDLLR 133
            M+   L + R
Sbjct: 128 AMINAALQIGR 138


>gi|303240290|ref|ZP_07326809.1| flagellar basal-body rod protein FlgC [Acetivibrio cellulolyticus
           CD2]
 gi|302592200|gb|EFL61929.1| flagellar basal-body rod protein FlgC [Acetivibrio cellulolyticus
           CD2]
          Length = 146

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 76/148 (51%), Gaps = 17/148 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M Y  +S  I  SGL  Q  RM  IS+NIANA TT    G+  YRRK + FEE    +  
Sbjct: 1   MGYF-SSLDIGASGLTAQRLRMDTISQNIANANTTRTENGT-AYRRKVVVFEEKSSDTPF 58

Query: 59  -------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                        GGVRV +I  D S   + +DPGHP A+ +G V+ PNV++L E  +M 
Sbjct: 59  SEYLNESSKKMVGGGVRVARITEDTSALKKIYDPGHPDADENGYVEMPNVDILTEMVNMI 118

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+ +I  +  M    L++ R
Sbjct: 119 SATRSYEANVTSINTTKSMAMKALEIGR 146


>gi|20807891|ref|NP_623062.1| flagellar basal body rod protein [Thermoanaerobacter tengcongensis
           MB4]
 gi|20516456|gb|AAM24666.1| Flagellar basal body rod protein [Thermoanaerobacter tengcongensis
           MB4]
          Length = 146

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 16/143 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L +S  I+ +GL  +  RM ++S+NIANA TT    G  PYRRK + F+E+   S     
Sbjct: 3   LFSSMDISATGLTAERVRMDVVSQNIANANTTRTVQGG-PYRRKLVVFKEIQPDSFQSIL 61

Query: 59  ---------GGVRVKKIGVDQSTFVEE-FDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GV V +I  D+ T +   +DPGHP A+  G V YPNVN++ E  DM    
Sbjct: 62  EKVKGKYTGKGVEVVQIIEDEQTPLRRVYDPGHPDADQQGYVSYPNVNIVAEMVDMISAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN+     +  M   +L++
Sbjct: 122 RAYEANVTAFNAAKSMFQKSLEI 144


>gi|284041507|ref|YP_003391847.1| flagellar basal-body rod protein FlgC [Conexibacter woesei DSM
           14684]
 gi|283945728|gb|ADB48472.1| flagellar basal-body rod protein FlgC [Conexibacter woesei DSM
           14684]
          Length = 149

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 82/148 (55%), Gaps = 19/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVM 55
           L  +  IA SGL  +  RM + +EN+ANA+TT    G  PY+RK +        SF  ++
Sbjct: 3   LFDAIDIAGSGLTAERLRMDVTAENLANAQTTRAADGG-PYQRKEVVLQQSGGSSFSTML 61

Query: 56  HGS-GGVRVKKI--GVDQSTFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMR 105
            G+ GGVR  +   GV+ +  VE+       +DPGHP A+  G V  PNVN + E  D+ 
Sbjct: 62  TGAIGGVRASEASKGVEVAGIVEDQTAQRQVYDPGHPDADPRGYVAMPNVNPVTEMVDLI 121

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++R Y AN+  ++ +  M T TL+LLR
Sbjct: 122 SSSRSYEANVTAMQSAKQMFTKTLELLR 149


>gi|146278635|ref|YP_001168794.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556876|gb|ABP71489.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 126

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 72/120 (60%), Gaps = 8/120 (6%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           G+  Q+ R++ +SENIAN     DTPG   + RKT+SF+     SG V    + +D+S+ 
Sbjct: 14  GMRSQALRLRHVSENIANV----DTPG---FHRKTVSFQSE-PDSGLVSTGPVRLDRSSL 65

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            + +DPGHP+A+ +G     NVN++VE AD RE  R Y ANL+   Q+  M  +  DLLR
Sbjct: 66  QKMYDPGHPMADDTGYYDGSNVNLVVEIADAREAQRSYEANLRMFDQARQMTQSLFDLLR 125


>gi|322421737|ref|YP_004200960.1| flagellar basal-body rod protein FlgC [Geobacter sp. M18]
 gi|320128124|gb|ADW15684.1| flagellar basal-body rod protein FlgC [Geobacter sp. M18]
          Length = 145

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 76/147 (51%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE--VMHGS 58
           MD+   S  I+ S LA +  RM +IS N+AN  +T    G  PYRRK   F    V  G 
Sbjct: 1   MDFFT-SMDISASALAAERTRMNLISSNLANVNSTRTAEGG-PYRRKDAVFTATPVTEGK 58

Query: 59  G------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                         V+V +I  DQ     +++PGHP A+A+G V YPN+NV+ E ADM  
Sbjct: 59  SFGAALSRANEARSVQVTQINEDQRPPRLQYEPGHPDADANGYVAYPNINVVEEMADMIT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+   + +  M   TLDLLR
Sbjct: 119 ASRSYEANITATQAAKSMALKTLDLLR 145


>gi|258592507|emb|CBE68816.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
           [NC10 bacterium 'Dutch sediment']
          Length = 140

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK--------TISFEEVM 55
           + AS  I  + LA Q  RM +I+EN+ANA  T  TP   PYRRK        T +FE ++
Sbjct: 1   MFASMEINATALAAQRVRMNLIAENLANAEVT-RTPIGGPYRRKGVVLGTRGTSAFEGLL 59

Query: 56  HGS---GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
           +     GGV V KI   Q+     ++P HP A+ +G V  PN+N ++E  D+   +R Y 
Sbjct: 60  NAGAAPGGVEVLKIVESQAPPNLVYNPSHPDADTAGYVAMPNINPVMEMVDLMSASRAYE 119

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN+  I+ +  MMT TL++ R
Sbjct: 120 ANISAIQIAKSMMTKTLEIGR 140


>gi|289523576|ref|ZP_06440430.1| flagellar basal-body rod protein FlgC [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503268|gb|EFD24432.1| flagellar basal-body rod protein FlgC [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 136

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 70/134 (52%), Gaps = 5/134 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----GSG 59
           L  S  IA S L      M +IS+N+AN  TT    G  PYRRK   F E +     G+ 
Sbjct: 3   LFDSLEIAGSSLTAHRLWMDLISQNLANVNTTRTQDGG-PYRRKVPIFAERLEAAEKGAK 61

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV+KI  D       + P HP A+  G V YPNVNV+ E  DM    R Y ANL  ++
Sbjct: 62  GVRVEKIEEDDLPPRMVYQPEHPDADEEGYVAYPNVNVVREMTDMMAATRAYEANLMVVE 121

Query: 120 QSHDMMTTTLDLLR 133
            + ++  + +D+LR
Sbjct: 122 SAKEIWGSAIDVLR 135


>gi|56695104|ref|YP_165451.1| flagellar basal body rod protein FlgC [Ruegeria pomeroyi DSS-3]
 gi|56676841|gb|AAV93507.1| flagellar basal-body rod protein FlgC [Ruegeria pomeroyi DSS-3]
          Length = 135

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSG 59
           M     S  +  S L  Q+ R++ +SENI+NA    DTPG   YRRKT+ FE E     G
Sbjct: 6   MSEFSKSLSVTASALRAQATRLRHVSENISNA----DTPG---YRRKTVPFEVERGRDDG 58

Query: 60  GVRVK--KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             RV   ++ +D+    + FDP HP+A+ +G  +  NV++++E AD RE  R Y ANL+ 
Sbjct: 59  VERVTTGRVKLDRRQLPDIFDPSHPLADETGHYQGSNVDLMIEIADAREAQRSYEANLKL 118

Query: 118 IKQSHDMMTTTLDLLR 133
             Q+  M  + ++LLR
Sbjct: 119 FDQARQMSASLMELLR 134


>gi|150019082|ref|YP_001311336.1| flagellar basal body rod protein FlgC [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905547|gb|ABR36380.1| flagellar basal-body rod protein FlgC [Clostridium beijerinckii
           NCIMB 8052]
          Length = 135

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 69/128 (53%), Gaps = 3/128 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRV 63
           S  I+ +GL+ +  RM  I+ N+ANA TT    G  PY RK   F+E +  +    GV+ 
Sbjct: 6   SMQISATGLSAERLRMDTITSNMANASTTRSANGKGPYVRKVAVFQEALDANKDMAGVKA 65

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            KI  D S   + +DP HP A+++G V  PNVNVL E ADM    R Y AN+ T      
Sbjct: 66  VKIENDPSPLRKVYDPTHPDADSNGYVTMPNVNVLNEMADMMVATRSYEANVDTFNALKS 125

Query: 124 MMTTTLDL 131
           M +  L++
Sbjct: 126 MFSKALEI 133


>gi|188583283|ref|YP_001926728.1| hypothetical protein Mpop_4075 [Methylobacterium populi BJ001]
 gi|179346781|gb|ACB82193.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium populi BJ001]
          Length = 113

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 63/112 (56%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M++  ENIANAR+T   P  +PYRRK   FE +   +      +I  D++ F     PGH
Sbjct: 1   MRVSVENIANARSTASAPDGEPYRRKIAVFEPITGNTEEAPAIRIVRDKTEFPTVHSPGH 60

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P A+A G +K PNV   VE +++R   R Y ANL+TI    D+   TL LL+
Sbjct: 61  PAADAGGNLKLPNVRPTVEMSELRSAMRAYEANLRTIATFDDLKGKTLALLK 112


>gi|15895433|ref|NP_348782.1| flagellar basal body rod protein FlgC [Clostridium acetobutylicum
           ATCC 824]
 gi|15025157|gb|AAK80122.1|AE007716_11 Flagellar basal body rod protein FlgC [Clostridium acetobutylicum
           ATCC 824]
 gi|325509579|gb|ADZ21215.1| flagellar basal body rod protein FlgC [Clostridium acetobutylicum
           EA 2018]
          Length = 143

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/130 (41%), Positives = 68/130 (52%), Gaps = 13/130 (10%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-----SG-------GV 61
           GL+ +  RM  IS NIAN  TT    G  PYRRK   F++         +G       GV
Sbjct: 13  GLSAERLRMDTISSNIANISTTRTADGG-PYRRKVAVFQDNFENLFNKETGKYENKPLGV 71

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           R  KI  D+S F  E+DPG+P ANA G V  PNVN+L E ADM  + R Y AN+  +   
Sbjct: 72  RAVKIDEDKSPFRMEYDPGNPDANADGYVAMPNVNILNEMADMMASTRAYEANVTAMNDE 131

Query: 122 HDMMTTTLDL 131
             M T  L++
Sbjct: 132 KGMYTKALEI 141


>gi|152990371|ref|YP_001356093.1| flagellar basal-body rod protein FlgC [Nitratiruptor sp. SB155-2]
 gi|151422232|dbj|BAF69736.1| flagellar basal-body rod protein FlgC [Nitratiruptor sp. SB155-2]
          Length = 136

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 8/131 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------GGVR 62
            ++ +GL+ Q  RM I++ N+ANA +  D     PYRRK   F+E++           V 
Sbjct: 7   EVSQTGLSTQKYRMDIVASNMANANSIDD--NGVPYRRKIPIFQEILDKEQNRIPLSKVA 64

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           +KK+  D S F  ++DP +P+A+ +G V+ PNV+ L E  DM    R Y ANL       
Sbjct: 65  IKKVVEDPSPFKLKYDPNNPLADENGYVQLPNVDPLREMVDMISAMRTYEANLTAFNTHK 124

Query: 123 DMMTTTLDLLR 133
           DM+  T+D+L+
Sbjct: 125 DMLLKTIDILK 135


>gi|320354315|ref|YP_004195654.1| flagellar basal-body rod protein FlgC [Desulfobulbus propionicus
           DSM 2032]
 gi|320122817|gb|ADW18363.1| flagellar basal-body rod protein FlgC [Desulfobulbus propionicus
           DSM 2032]
          Length = 145

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 70/136 (51%), Gaps = 15/136 (11%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-------------VMH 56
           IA SGL  Q+ R+  IS N+AN+ TT  TP   PY++K++ F+              +  
Sbjct: 9   IAASGLKAQTMRLNTISANLANSETTS-TPEGGPYKKKSVVFQTENLPFKQHLNNSLLAQ 67

Query: 57  GSG-GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           G   GV+V KI  D S     +DP HP A   G V+ PNVNVL E  DM  T R Y AN 
Sbjct: 68  GQAQGVKVAKIIEDTSEPQRVYDPTHPDAKEDGYVEMPNVNVLKEMVDMMSTTRSYEANT 127

Query: 116 QTIKQSHDMMTTTLDL 131
            TIK +  M    LD+
Sbjct: 128 TTIKSAKRMAMRALDI 143


>gi|78355402|ref|YP_386851.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217807|gb|ABB37156.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 146

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SF 51
           MD++ A   I  S L+ +   M I S N+ANA+TT  T G  PYRRK +          F
Sbjct: 1   MDFMTA-LDIGASALSAERTSMNITSMNLANAKTT-RTIGGGPYRRKAVVMAATEVDDPF 58

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            + M  +      GVRV+ I  D   F + ++PGHP A+A+G VKYP++NV+ E A++  
Sbjct: 59  SKHMQSALDRELRGVRVQHIVRDNRPFRQVYEPGHPDADANGYVKYPDINVVEEMANLMT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + R Y A++ TI+    M T  L++ R
Sbjct: 119 SQRGYQASVSTIEAVKSMYTKALEIGR 145


>gi|308273186|emb|CBX29789.1| Flagellar basal-body rod protein flgC [uncultured Desulfobacterium
           sp.]
          Length = 140

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 74/137 (54%), Gaps = 10/137 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVM 55
            + S  I++SGL  Q  RM II+EN++N  TT    G  PYRRK I        SF+EV+
Sbjct: 3   FMESLKISSSGLYAQRKRMDIIAENLSNIETTRTEKGG-PYRRKMIAIGSEPIDSFDEVL 61

Query: 56  HGS-GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                GVRV  I  D+S F   ++P HP A+  G +  PNV++ VE A+M      + AN
Sbjct: 62  DSQLEGVRVDAIVEDESPFRIVYNPSHPDADKDGCLSKPNVDLAVEMANMLMARNAFSAN 121

Query: 115 LQTIKQSHDMMTTTLDL 131
           L  IK +  M+   L++
Sbjct: 122 LSAIKSTRQMVLKALEI 138


>gi|95929847|ref|ZP_01312588.1| flagellar basal-body rod protein FlgC [Desulfuromonas acetoxidans
           DSM 684]
 gi|95134143|gb|EAT15801.1| flagellar basal-body rod protein FlgC [Desulfuromonas acetoxidans
           DSM 684]
          Length = 143

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 72/140 (51%), Gaps = 13/140 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-----HGS 58
           +  S +I++S L  Q  R+  IS N+ANA TT  TP   PYRRK + FE        H S
Sbjct: 3   IFTSLNISSSALKAQRIRLDTISSNMANAETTR-TPEGGPYRRKMVVFEPAQVSFADHLS 61

Query: 59  G-------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV+V +I  + S     FDP HP AN  G V  PN+++L ET DM    R Y
Sbjct: 62  AKEKKALNGVQVSQIVTEDSEPRLIFDPSHPDANDQGYVALPNIDLLKETTDMMLATRAY 121

Query: 112 MANLQTIKQSHDMMTTTLDL 131
            AN+ TIK +  M    L++
Sbjct: 122 EANITTIKSAKRMALKALEI 141


>gi|119384843|ref|YP_915899.1| flagellar basal body rod protein FlgC [Paracoccus denitrificans
           PD1222]
 gi|119374610|gb|ABL70203.1| flagellar basal body rod protein [Paracoccus denitrificans PD1222]
          Length = 130

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 77/132 (58%), Gaps = 10/132 (7%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHG--SGGV 61
           +++  +A SG+  Q+ R++ ISENIANA    DTPG   YRRK ++F E+V  G  +G V
Sbjct: 5   LSATELAVSGMKSQAVRLRHISENIANA----DTPG---YRRKLVAFREQVDFGRPTGAV 57

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                  D+       DP HP+A+  G     NV++++E AD +E  R Y ANL+  +QS
Sbjct: 58  TPGPPRFDRRELPRIHDPAHPMADEEGYYSGSNVDLIIEIADAKEAGRSYEANLRVFEQS 117

Query: 122 HDMMTTTLDLLR 133
             M ++ LDL+R
Sbjct: 118 RQMGSSLLDLIR 129


>gi|225159033|ref|ZP_03725343.1| flagellar basal-body rod protein FlgC [Opitutaceae bacterium TAV2]
 gi|224802412|gb|EEG20674.1| flagellar basal-body rod protein FlgC [Opitutaceae bacterium TAV2]
          Length = 140

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 10/139 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L++     +S L  Q  R+ II++NIANA TT   P   PY+R+ +SFE  +    G   
Sbjct: 3   LLSGIGPTSSALNAQKTRLDIIAQNIANAHTT-RGPNGLPYQRQMVSFESELTNKLGQID 61

Query: 61  ------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                 VRV  +  D +     +DP HP A+ASG+V  PNVN+  E  D+   +R Y AN
Sbjct: 62  GVPLRSVRVSSVSGDTTAGQRVYDPQHPDADASGMVTMPNVNLAYEMVDLITASRTYEAN 121

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           LQ +K S  M    L++ R
Sbjct: 122 LQVVKNSRQMALKALEIGR 140


>gi|225850273|ref|YP_002730507.1| flagellar basal-body rod protein FlgC [Persephonella marina EX-H1]
 gi|225645322|gb|ACO03508.1| flagellar basal-body rod protein FlgC [Persephonella marina EX-H1]
          Length = 136

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 68/130 (52%), Gaps = 6/130 (4%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            ++ +G+A Q  R+ I S N+AN  +T    G  PYRRK   F+ V+       V K+ +
Sbjct: 7   EVSVTGMAAQRIRIDITSSNLANVNSTRTEDGQ-PYRRKVPVFQAVLDNQTKTPVYKVKI 65

Query: 69  -----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                D S F  +FDP HP A+ +G V YPNV+ L E  DM    R Y ANL       D
Sbjct: 66  PEVIEDPSPFKLKFDPSHPDADQNGYVAYPNVDPLREMVDMMSAIRTYEANLTAFNTHKD 125

Query: 124 MMTTTLDLLR 133
           M+  +L+L+R
Sbjct: 126 MLLKSLELIR 135


>gi|125972984|ref|YP_001036894.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           ATCC 27405]
 gi|256004781|ref|ZP_05429756.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
           2360]
 gi|281417195|ref|ZP_06248215.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           JW20]
 gi|125713209|gb|ABN51701.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           ATCC 27405]
 gi|255991231|gb|EEU01338.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
           2360]
 gi|281408597|gb|EFB38855.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           JW20]
 gi|316940780|gb|ADU74814.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
           1313]
          Length = 147

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 71/149 (47%), Gaps = 18/149 (12%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
           M Y   S  I+ S L  Q  RM  IS+NIANA TT  T    PYRRKT+ FEE       
Sbjct: 1   MGYF-TSLDISASALTAQRLRMDTISQNIANANTT-RTENGQPYRRKTVLFEEKSSTGSF 58

Query: 57  ------------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                          GVRV  I  D+S F   +DPGHP A+  G V  PNV+V+ E  +M
Sbjct: 59  SEYLENSIRGKTAGAGVRVTGIVEDRSPFKRVYDPGHPDADEEGYVLMPNVDVITEMVNM 118

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  I  +  +    L++ R
Sbjct: 119 ISATRAYEANITAINTTKGLAMKALEIGR 147


>gi|300854206|ref|YP_003779190.1| flagellar basal-body rod protein FlgC [Clostridium ljungdahlii DSM
           13528]
 gi|300434321|gb|ADK14088.1| flagellar basal-body rod protein FlgC [Clostridium ljungdahlii DSM
           13528]
          Length = 143

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 69/134 (51%), Gaps = 12/134 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE----VMHGSG----- 59
            I+ SGL+ +   M  I+ N+ANA TT    G  PYRRK   F E     +  +G     
Sbjct: 9   RISASGLSAERLSMDTIASNMANAETTRGADGQ-PYRRKVAVFGENLSKALDSNGNYGDV 67

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GV+V  I  D S F  E+DP +P A+ASG V  PNVN+L E ADM    R Y ANL  
Sbjct: 68  PEGVKVVAIKDDTSPFKREYDPTNPDADASGYVSMPNVNILNEMADMMVATRAYEANLSA 127

Query: 118 IKQSHDMMTTTLDL 131
           I     M +  L++
Sbjct: 128 INSEKSMFSKALEI 141


>gi|148270547|ref|YP_001245007.1| flagellar basal-body rod protein FlgC [Thermotoga petrophila RKU-1]
 gi|170289253|ref|YP_001739491.1| flagellar basal-body rod protein FlgC [Thermotoga sp. RQ2]
 gi|147736091|gb|ABQ47431.1| flagellar basal-body rod protein FlgC [Thermotoga petrophila RKU-1]
 gi|170176756|gb|ACB09808.1| flagellar basal-body rod protein FlgC [Thermotoga sp. RQ2]
          Length = 140

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 8/132 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------GSGGV 61
           +I+ +G++ Q  R++I+S NIANA TT    G +PYRRK   F E +         S GV
Sbjct: 9   NISATGMSAQRLRVEIVSTNIANAETTRTETG-EPYRRKVPVFAEYLRRTPNGKIESAGV 67

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V KI  D S F   +DP HP A+ +G V+ PNVN++ E  D+    R Y AN+     +
Sbjct: 68  KVVKIEEDPSPFRLVYDPAHPDADENGYVRMPNVNIVREMVDLINAQRAYDANVAAFNVT 127

Query: 122 HDMMTTTLDLLR 133
             M+ + L + R
Sbjct: 128 KAMVNSALQIGR 139


>gi|42524765|ref|NP_970145.1| flagellar basal-body rod protein [Bdellovibrio bacteriovorus HD100]
 gi|39576975|emb|CAE78204.1| flagellar basal-body rod protein [Bdellovibrio bacteriovorus HD100]
          Length = 147

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---------EV 54
            +    I++SG+A Q  RM  I+ NIAN  TT  TP   PYRRK + FE         E+
Sbjct: 4   FLTGMRISSSGMAAQRMRMNTIASNIANINTT-QTPEGGPYRRKDVVFEAMPDAKNFGEI 62

Query: 55  MHGSGG------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
           +  +        V+V  +  D+   + +++P HP ANA G V YPN+N++ E  +M + +
Sbjct: 63  ISSTDPAGSFQRVQVTDVISDRKAPLLKYEPDHPDANADGYVAYPNINLMEEMTNMIQAS 122

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  ++ S DM  + L++ R
Sbjct: 123 RSYEANVTAVQASKDMALSALEIGR 147


>gi|296274007|ref|YP_003656638.1| flagellar basal-body rod protein FlgC [Arcobacter nitrofigilis DSM
           7299]
 gi|296098181|gb|ADG94131.1| flagellar basal-body rod protein FlgC [Arcobacter nitrofigilis DSM
           7299]
          Length = 153

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 22/146 (15%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---------- 58
           +IA+SG++ Q  R+ ++S NIANA+TT  T G  PY+++ + F+E++             
Sbjct: 8   NIASSGMSAQRTRINVVSANIANAKTTHSTDGG-PYKKQNVVFQEMLLSENEKLKANDNQ 66

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV +K+I   +   + +F+P HP ANA G V YPN+N ++E  D+ E 
Sbjct: 67  DKQSTLPSKNLSGVGIKQIVESKDKPIMKFEPDHPDANADGYVAYPNINPVIEMVDLIEA 126

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+     +  + T TL+LLR
Sbjct: 127 MRSYEANVSAFTTTKTIDTKTLELLR 152


>gi|157362949|ref|YP_001469716.1| flagellar basal-body rod protein FlgC [Thermotoga lettingae TMO]
 gi|157313553|gb|ABV32652.1| flagellar basal-body rod protein FlgC [Thermotoga lettingae TMO]
          Length = 137

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 8/137 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
           ++LI   +++ SG+  Q  R+ IIS NIAN+ TT    G+ PYRR+   F E +   G  
Sbjct: 3   EFLIM--NVSASGMTAQRLRVDIISSNIANSETTRTDRGT-PYRRRVPVFSEYLISDGKS 59

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV+V +I  D S F   +DP HP A+ +G V  PNVNVL E  D+    R Y AN+ 
Sbjct: 60  ASTGVKVVRIEEDPSPFRLVYDPSHPDADENGYVSLPNVNVLREMVDLISAQRSYEANIS 119

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+ + L + R
Sbjct: 120 AFNTTKSMINSALQIGR 136


>gi|317153716|ref|YP_004121764.1| flagellar basal-body rod protein FlgC [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943967|gb|ADU63018.1| flagellar basal-body rod protein FlgC [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 145

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 16/145 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------- 52
           MD++ A   I  SGL  Q A + +IS N+AN RTT    G  PY+RK++SFE        
Sbjct: 1   MDFMTA-LDIGASGLKAQRATLNVISMNMANMRTTKTLEGG-PYQRKSVSFESTPVYSPF 58

Query: 53  -EVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            E M+        GV+V  +  D+  F + ++P HP AN  G V YP++NV+ E  +M  
Sbjct: 59  DEAMNNQLNRELHGVKVLGVTADERPFKQVYEPHHPDANDLGYVYYPDINVVEEMTNMMN 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R Y AN+QTI+    M    L +
Sbjct: 119 ATRGYEANVQTIESVKQMFNKALQI 143


>gi|254519424|ref|ZP_05131480.1| flagellar basal-body rod protein FlgC [Clostridium sp. 7_2_43FAA]
 gi|226913173|gb|EEH98374.1| flagellar basal-body rod protein FlgC [Clostridium sp. 7_2_43FAA]
          Length = 134

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 70/128 (54%), Gaps = 4/128 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKK 65
            I+ SGL+ +  RM  I+ NI NA TT    G  PY RK   F+E +  +    GV+  +
Sbjct: 8   RISASGLSAERLRMDTITSNITNATTTRGEDGK-PYVRKIAVFQENLDKANKLNGVKAVE 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  D+S     +DP HP AN  G V  PNVN+L E AD+   +R Y AN+ T+  S  M 
Sbjct: 67  IVEDESPLKSVYDPTHPDANEDGYVTMPNVNLLNEMADIIAASRAYEANVDTLNASKSMF 126

Query: 126 TTTLDLLR 133
           T +L+L R
Sbjct: 127 TKSLELGR 134


>gi|254458686|ref|ZP_05072110.1| flagellar basal-body rod protein FlgC [Campylobacterales bacterium
           GD 1]
 gi|207084452|gb|EDZ61740.1| flagellar basal-body rod protein FlgC [Campylobacterales bacterium
           GD 1]
          Length = 163

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 78/162 (48%), Gaps = 33/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-----TISFEEVMHGS 58
            ++S  I+  GL+ Q  R+  IS+NIANA+TT    G  PYRRK      I F E  + +
Sbjct: 3   FLSSFDISGYGLSAQRVRVNTISQNIANAQTTRTEEGG-PYRRKEVVFKAIDFNEQFNKA 61

Query: 59  GG---------------------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
            G                           V V KI  D S    +FDP HP A+A+G V 
Sbjct: 62  IGKMTDSAKFEDPLNEGDFGKKVNPAIMSVIVDKISRDDSEPKMKFDPSHPDADANGYVA 121

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           YPN+N ++E AD+ E  R Y AN+   + S +M  + + LL+
Sbjct: 122 YPNINPVIEMADLVEATRSYQANVAAFESSKNMANSAISLLQ 163


>gi|301168115|emb|CBW27701.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
          Length = 146

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 15/145 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SFEEV 54
           L+ S  I++SGLA    RM  IS NIANA+TT    G  PYRRK +         +F E+
Sbjct: 3   LLTSLKISSSGLAANKKRMASISSNIANAQTTRTAEGG-PYRRKEVVFGSEPARETFSEI 61

Query: 55  MHGSGGVRVKKIGVDQ--STF---VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
           + G  G + + +   +  ST    + +++P HP AN  G V YP++NV+ E A+M   +R
Sbjct: 62  LEGELGEKAQTVQATEVISTNRPPILKYEPNHPDANDQGYVAYPDINVMEEMANMISASR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLLRD 134
            Y AN+  +  + +M    L+L R+
Sbjct: 122 AYEANINAMNTTKNMAMKALELGRN 146


>gi|291529042|emb|CBK94628.1| flagellar basal-body rod protein FlgC [Eubacterium rectale M104/1]
          Length = 146

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 16/143 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
           L  + +I+ SG+  +  R  II++NIAN  TT  T G  PYRRK ++F E        ++
Sbjct: 3   LFQAFNISASGMTAERFRTDIIAQNIANVNTTS-TKGGTPYRRKIVTFSEKNVTPFSQIY 61

Query: 57  GSG-------GVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S        GV+V  +  D ST F++E+DP +P A+A G V YPNVN + E  ++ +  
Sbjct: 62  SSSKKAAVGNGVKVSSVTSDYSTDFIKEYDPSNPDADADGYVSYPNVNTVTEMTNLIDAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN    + S  M    L +
Sbjct: 122 RAYEANATAFEASKSMAQNGLQI 144


>gi|222100200|ref|YP_002534768.1| Flagellar basal-body rod protein FlgC [Thermotoga neapolitana DSM
           4359]
 gi|221572590|gb|ACM23402.1| Flagellar basal-body rod protein FlgC [Thermotoga neapolitana DSM
           4359]
          Length = 139

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 8/132 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------GSGGV 61
           +I+ +G++ Q  R++I+S NIANA TT    G +PYRRK   F E +         S GV
Sbjct: 8   NISATGMSAQRLRVEIVSTNIANAETTRTEMG-EPYRRKVPVFAEYLRRAKDGRIESAGV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V KI  D S F   +DP HP A+ +G V+ PNVN++ E  D+    R Y AN+     +
Sbjct: 67  KVVKIVEDPSPFRLVYDPTHPDADENGYVRMPNVNIVREMVDLINAQRAYDANVAAFNVT 126

Query: 122 HDMMTTTLDLLR 133
            +M+ + L + R
Sbjct: 127 KNMVNSALQIGR 138


>gi|188590422|ref|YP_001920200.1| flagellar basal body rod protein FlgC [Clostridium botulinum E3
           str. Alaska E43]
 gi|188500703|gb|ACD53839.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E3
           str. Alaska E43]
          Length = 135

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 3/128 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRV 63
           S  I+ +G++ +  RM  I+ N+ NA TT    GS PY RK   F+E +  +    G++ 
Sbjct: 6   SMQISATGISAERLRMDTITSNMTNASTTRSADGSGPYVRKIAVFQEALDENRKMAGIKP 65

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            KI  D+S   + ++P HP A+ +G V  PNVNVL E ADM  + R Y AN++T+     
Sbjct: 66  AKIVEDKSPLRKVYNPTHPDADETGYVTMPNVNVLNEMADMMVSTRSYEANVETLNALKG 125

Query: 124 MMTTTLDL 131
           M +  L++
Sbjct: 126 MFSKALEI 133


>gi|33592477|ref|NP_880121.1| flagellar basal body rod protein FlgC [Bordetella pertussis Tohama
           I]
 gi|33572123|emb|CAE41665.1| flagellar basal-body rod protein FlgC [Bordetella pertussis Tohama
           I]
 gi|332381894|gb|AEE66741.1| flagellar basal body rod protein FlgC [Bordetella pertussis CS]
          Length = 139

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 8/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------EVMH 56
           L++   IA S L+ QS RM + + N+ANA +    P   PYR + + F+           
Sbjct: 3   LLSIFEIAGSALSAQSQRMNVSASNMANADSVAG-PDGQPYRARQVVFQVNPPAGQAFGQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GGVRV  +  DQS F + +DP HP+A+A G V  PNV+ + ET +M   +R Y AN++
Sbjct: 62  EIGGVRVAGVVEDQSPFKKIYDPKHPMADAQGYVNMPNVDPVAETVNMIAASRSYQANVE 121

Query: 117 TIKQSHDMMTTTLDL 131
            +  +  +M  TL +
Sbjct: 122 VLNTAKQLMLKTLTI 136


>gi|332981429|ref|YP_004462870.1| flagellar basal-body rod protein FlgC [Mahella australiensis 50-1
           BON]
 gi|332699107|gb|AEE96048.1| flagellar basal-body rod protein FlgC [Mahella australiensis 50-1
           BON]
          Length = 129

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 3/121 (2%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           SGL  Q  RM IIS+NIANA TT  TP   PY R+   F +    SG V+V+ I  D   
Sbjct: 12  SGLTAQRLRMDIISQNIANANTTR-TPEGGPYVRQMPVFSQ--SSSGMVQVQAIVSDPRP 68

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           F   +DP HP A+ +G V+ PNV+V  E  DM    R Y AN+  I  + +M    +D+ 
Sbjct: 69  FKLTYDPSHPDADPNGYVRMPNVDVTEEMVDMVSATRSYEANVTVIDAAKNMAMRAMDIA 128

Query: 133 R 133
           R
Sbjct: 129 R 129


>gi|33596138|ref|NP_883781.1| flagellar basal body rod protein FlgC [Bordetella parapertussis
           12822]
 gi|33601539|ref|NP_889099.1| flagellar basal body rod protein FlgC [Bordetella bronchiseptica
           RB50]
 gi|33573141|emb|CAE36788.1| flagellar basal-body rod protein FlgC [Bordetella parapertussis]
 gi|33575975|emb|CAE33054.1| flagellar basal-body rod protein FlgC [Bordetella bronchiseptica
           RB50]
          Length = 139

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 8/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------EVMH 56
           L++   IA S L+ QS RM + + N+ANA +    P   PYR + + F+           
Sbjct: 3   LLSIFEIAGSALSAQSQRMNVSASNMANADSVAG-PDGQPYRARQVVFQVNPPPGQAFGQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GGVRV  +  DQS F + +DP HP+A+A G V  PNV+ + ET +M   +R Y AN++
Sbjct: 62  EIGGVRVAGVVEDQSPFKKIYDPKHPMADAQGYVNMPNVDPVAETVNMIAASRSYQANVE 121

Query: 117 TIKQSHDMMTTTLDL 131
            +  +  +M  TL +
Sbjct: 122 VLNTAKQLMLKTLTI 136


>gi|78224306|ref|YP_386053.1| flagellar basal-body rod protein FlgC [Geobacter metallireducens
           GS-15]
 gi|78195561|gb|ABB33328.1| Flagellar basal-body rod protein FlgC [Geobacter metallireducens
           GS-15]
          Length = 147

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 77/146 (52%), Gaps = 17/146 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           MD+  A   I++S L+ +  RM +IS NIANA +T    G  PY+RK   F         
Sbjct: 1   MDFFSA-MQISSSALSAERTRMNLISSNIANANSTRTAEGG-PYKRKDAVFAATPAAEKF 58

Query: 52  ----EEVMHGS--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
               E +  G+   GV+V ++  DQ+    ++DP HP ANA G V  PNVNV+ E ADM 
Sbjct: 59  QAAMERMRRGTSPAGVQVTQVIEDQNPPRLQYDPTHPDANAQGYVALPNVNVVEEMADMI 118

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDL 131
              R Y AN+  ++ +  M   TL+L
Sbjct: 119 AATRAYEANVTAVQAAKGMALKTLEL 144


>gi|134095099|ref|YP_001100174.1| basal-body rod protein [Herminiimonas arsenicoxydans]
 gi|133739002|emb|CAL62050.1| Flagellar basal-body rod protein FlgC (Putative proximal rod
           protein) [Herminiimonas arsenicoxydans]
          Length = 134

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHG--SGGVRVKK 65
           ++A S ++ QS R+ ++S NIANA +T    G   YR K + F+ V M G  S GV+V++
Sbjct: 8   NVAGSAMSAQSQRLNVVSSNIANAESTTSADGKT-YRAKQVEFQSVPMAGATSTGVKVRQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D S     FDP HP A+ +G V  PNVNV+ E  +M   +R Y  N++T+  +  M+
Sbjct: 67  VVEDASPLKMVFDPKHPNADETGHVAMPNVNVVEEMVNMISASRSYQTNVETMNAAKTML 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|218133658|ref|ZP_03462462.1| hypothetical protein BACPEC_01527 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991033|gb|EEC57039.1| hypothetical protein BACPEC_01527 [Bacteroides pectinophilus ATCC
           43243]
          Length = 149

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 18/145 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI----------SFEE 53
           L +  +IA+SG+  Q  R  +ISENIAN  TT  + G+ PY RK +          SFE 
Sbjct: 3   LFSQFNIASSGMTAQRLRTDVISENIANVNTTRTSDGT-PYVRKEVYFTEKGKSVQSFEH 61

Query: 54  VMHGS------GGVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           V   +       GV+V  I  D +T  V+++DP HP A+ +G V YPNVNV+ E  D+ +
Sbjct: 62  VFEAARNGIAGNGVKVTSILEDNTTDMVKKYDPSHPDADENGYVTYPNVNVVQEMTDLID 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R Y AN+        M T  L++
Sbjct: 122 ATRSYEANVTAFNAGKSMATKGLEI 146


>gi|303326604|ref|ZP_07357046.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. 3_1_syn3]
 gi|302862592|gb|EFL85524.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. 3_1_syn3]
          Length = 146

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 16/145 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SF 51
           MD+L A   I  SGL     R+  IS N+ANA+TT  TP   PYRR+T+          F
Sbjct: 1   MDFLTA-LDIGASGLTADRTRINTISMNLANAKTT-RTPQGGPYRRRTVVQAATDVDDPF 58

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
              M  +      GVRV  + +D+    + ++PGHP ANA G V YP++NV+ E A++  
Sbjct: 59  SVHMRSALDRELKGVRVMAVTMDKRPLKQVYEPGHPDANAEGYVSYPDINVVEEMANLMS 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R Y AN+ T++    M    L++
Sbjct: 119 AQRNYEANVTTVEAIKGMYNKALEI 143


>gi|327399355|ref|YP_004340224.1| flagellar basal-body rod protein FlgC [Hippea maritima DSM 10411]
 gi|327181984|gb|AEA34165.1| flagellar basal-body rod protein FlgC [Hippea maritima DSM 10411]
          Length = 137

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 6/132 (4%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           S +IA+SG++ Q  RM IIS NIANA T   TP   PY+R+ + FE + +      +KK+
Sbjct: 6   SMNIASSGMSAQRLRMNIISSNIANADTVR-TPEGGPYKRRDVVFEAIGYSKFSDVLKKV 64

Query: 67  GV-----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V     D +     +DP +P+AN  G V YPN+N ++E  ++ +  R Y AN   I  +
Sbjct: 65  QVADIIRDDTPPKLVYDPSNPLANKDGYVAYPNINPVIEMTNLIDAMRTYQANASVIDSA 124

Query: 122 HDMMTTTLDLLR 133
              +   L +LR
Sbjct: 125 KQTIQAALGILR 136


>gi|326791545|ref|YP_004309366.1| flagellar basal-body rod protein FlgC [Clostridium lentocellum DSM
           5427]
 gi|326542309|gb|ADZ84168.1| flagellar basal-body rod protein FlgC [Clostridium lentocellum DSM
           5427]
          Length = 145

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 72/139 (51%), Gaps = 15/139 (10%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---------- 56
           S  IA SGL  Q  R+ IIS+N+AN  TT    G  PY+RKT+ FE++ +          
Sbjct: 6   SMDIAASGLTAQRLRLDIISQNMANVNTTRTAEGG-PYKRKTVIFEQMQNENSFSSILNK 64

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G  GVRV +I  D+S     ++P HP ANA G V+ PNVN + E  +M   +R Y 
Sbjct: 65  KKQSGVNGVRVARIVEDESQGALVYNPTHPDANAQGYVEMPNVNTVDEMVNMISASRSYE 124

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN+ +      M    L++
Sbjct: 125 ANVTSFNTMKSMFAKALEI 143


>gi|15644117|ref|NP_229166.1| flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8]
 gi|281412855|ref|YP_003346934.1| flagellar basal-body rod protein FlgC [Thermotoga naphthophila
           RKU-10]
 gi|4981925|gb|AAD36435.1|AE001790_7 flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8]
 gi|281373958|gb|ADA67520.1| flagellar basal-body rod protein FlgC [Thermotoga naphthophila
           RKU-10]
          Length = 140

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 8/132 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------GSGGV 61
           +I+ +G++ Q  R++I+S NIANA TT    G +PYRRK   F E +         S GV
Sbjct: 9   NISATGMSAQRLRVEIVSTNIANAETTRTETG-EPYRRKVPVFAEYLRRTPNGKIESAGV 67

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V KI  D S F   +DP HP A+ +G V+ PNVN++ E  D+    R Y AN+     +
Sbjct: 68  KVVKIEEDPSPFRLVYDPTHPDADENGYVRMPNVNIVREMVDLINAQRAYDANVAAFNVT 127

Query: 122 HDMMTTTLDLLR 133
             M+ + L + R
Sbjct: 128 KAMVNSALQIGR 139


>gi|258404782|ref|YP_003197524.1| flagellar basal-body rod protein FlgC [Desulfohalobium retbaense
           DSM 5692]
 gi|257797009|gb|ACV67946.1| flagellar basal-body rod protein FlgC [Desulfohalobium retbaense
           DSM 5692]
          Length = 142

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 70/139 (50%), Gaps = 12/139 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVM-- 55
           L  +  I+ S +  QS RM   S N+AN  TT    G +PY RK++      SF++ +  
Sbjct: 3   LFTAMDISASAMTAQSLRMNAASSNLANTETTRTASG-EPYYRKSVVLSPKNSFDDELAS 61

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G  GV V  I  DQ    + +DPGHP AN  G V  P++NVL E  D+    R Y 
Sbjct: 62  RLPEGVAGVEVAAIRQDQEALRDVYDPGHPDANGEGYVTMPDINVLEEMTDIMAATRAYE 121

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN+ +IK S  M    L++
Sbjct: 122 ANVTSIKASQRMAVKALEI 140


>gi|304321145|ref|YP_003854788.1| putative flagellar basal-body rod protein FlgC [Parvularcula
           bermudensis HTCC2503]
 gi|303300047|gb|ADM09646.1| putative flagellar basal-body rod protein FlgC [Parvularcula
           bermudensis HTCC2503]
          Length = 127

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 9/132 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L+ S  IA  G+  QS RM+ ++EN++N     DTPG   Y+RK ++F         V
Sbjct: 3   DPLLTSLRIAGDGMNAQSFRMRTVNENLSNI----DTPG---YQRKMLTFST--GNEQAV 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           RV ++ +      +  DPGHP+A+A G V+  NV++L E +D RE  R + AN++  +Q+
Sbjct: 54  RVSRMILSSDEARKVHDPGHPLADADGFVEMSNVDMLTELSDAREAKRSFDANIEAFRQA 113

Query: 122 HDMMTTTLDLLR 133
            +M    + L+R
Sbjct: 114 REMYAGLISLMR 125


>gi|150390489|ref|YP_001320538.1| flagellar basal-body rod protein FlgC [Alkaliphilus metalliredigens
           QYMF]
 gi|149950351|gb|ABR48879.1| flagellar basal-body rod protein FlgC [Alkaliphilus metalliredigens
           QYMF]
          Length = 147

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 71/137 (51%), Gaps = 17/137 (12%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-------------EEVMHGS- 58
           SGL  +  RM  IS+NIANA TT  TP   PY+R+ + F             E +M+ + 
Sbjct: 12  SGLTAERFRMDTISKNIANANTT-RTPNGSPYKRQVVLFQSKEDAKGFSSQLERIMNNNE 70

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GGV V  +  D S + + +DPGHP AN  G V  PNV+++VE A+M    R Y AN  
Sbjct: 71  KPGGVEVVGVKNDSSPYRQVYDPGHPDANEEGYVLMPNVDIVVEMANMISATRAYEANTT 130

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  M    L++ R
Sbjct: 131 ALNATKSMAMKALEIGR 147


>gi|226944490|ref|YP_002799563.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
 gi|226719417|gb|ACO78588.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
          Length = 135

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 4/125 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKKI 66
           IA S L+ QS RM + + N+AN  + G   G   YR K + FE +  G   +GGVRV ++
Sbjct: 9   IAGSALSAQSQRMNVTASNLANVDSVGSEDG-QAYRAKQVLFESMARGRSDTGGVRVVQV 67

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D S   +E+ P HP+AN  G V  PNV  + E  +M   +R Y AN++ +  S  M+ 
Sbjct: 68  VEDPSPLRQEYRPEHPLANEEGYVSLPNVEPVHEMVNMIAASRSYQANVEVMNTSKQMLL 127

Query: 127 TTLDL 131
            TL L
Sbjct: 128 KTLTL 132


>gi|188586015|ref|YP_001917560.1| flagellar basal-body rod protein FlgC [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350702|gb|ACB84972.1| flagellar basal-body rod protein FlgC [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 146

 Score = 84.3 bits (207), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 73/141 (51%), Gaps = 18/141 (12%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-------KTISFEEVMHG----- 57
           I+ SGL  +  RM +IS NIANA TT  T   +PYRR       +  SF + +H      
Sbjct: 7   ISGSGLTAERLRMDVISNNIANANTTR-TEDGEPYRRQMPVFETRGKSFSDHLHSFLQKD 65

Query: 58  ----SGGVRVKKIGVDQSTFVEEFDPGHPVANA-SGIVKYPNVNVLVETADMRETNRLYM 112
               S GVRV  I  D S F E +DP HP A+  +G V+ PNV ++ E  DM   +R Y 
Sbjct: 66  GDFDSQGVRVSSIEEDDSPFKEIYDPEHPEADPETGYVQKPNVEIVKEMTDMITASRAYE 125

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN   I  +  M + TLD+ R
Sbjct: 126 ANATAIDNAKSMASNTLDIGR 146


>gi|302670716|ref|YP_003830676.1| flagellar basal-body rod protein FlgC [Butyrivibrio proteoclasticus
           B316]
 gi|302395189|gb|ADL34094.1| flagellar basal-body rod protein FlgC [Butyrivibrio proteoclasticus
           B316]
          Length = 149

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 16/144 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           +  S +I +SG+  Q  RM IISENIANA TT    G  PY RK + F            
Sbjct: 3   IFDSFNINSSGMTAQRFRMDIISENIANANTTRTKDGDTPYTRKVVRFAEKGTQTPFSRI 62

Query: 52  --EEVMHGSG-GVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             E + H SG GV+V ++  D  T +   +DP HP A+A+G V YPNVN + E  ++ + 
Sbjct: 63  LNERLDHYSGRGVKVTQVQDDTWTQYNIVYDPSHPDADANGYVTYPNVNTVTEMTNLIDA 122

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
           +R Y AN      S ++    L+L
Sbjct: 123 SRSYEANATAFDASKNIAARGLEL 146


>gi|37525839|ref|NP_929183.1| flagellar basal body rod protein FlgC [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|36785268|emb|CAE14209.1| Flagellar basal-body rod protein FlgC (Putative proximal rod
           protein) [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 134

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           L++   IA S L+ QS R+ + + N+ANA +    P   PYR K + F         +GG
Sbjct: 3   LLSIFDIAGSALSAQSQRLNVSASNMANADSVAG-PDGQPYRAKQVVFRVAAPAGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV +I  D + F  E+ PGHP+A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVSEIVDDPTPFRLEYQPGHPLADEKGYVRMPNVDVVGEMINTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDL 131
           +  MM  TL L
Sbjct: 122 TKSMMLKTLTL 132


>gi|291519599|emb|CBK74820.1| flagellar basal-body rod protein FlgC [Butyrivibrio fibrisolvens
           16/4]
          Length = 151

 Score = 84.3 bits (207), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 69/131 (52%), Gaps = 20/131 (15%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     I  +GL  Q  RM II+ENIAN  TT  T    PYRRK ++F E  + +G    
Sbjct: 3   LFQPFDIVATGLTAQRFRMDIIAENIANVSTT-RTQNGGPYRRKIVTFTEKNYHAGIPNF 61

Query: 60  --------------GVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                         GV+V K+  D  T F+ E+DP HP A+ +G V+YPNVN + E  ++
Sbjct: 62  KNVLKDKQLRFYGNGVKVSKVSEDTETDFIMEYDPSHPDADENGYVRYPNVNTVTEMTNL 121

Query: 105 RETNRLYMANL 115
            + +R Y AN+
Sbjct: 122 IDASRSYEANV 132


>gi|222055648|ref|YP_002538010.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
 gi|221564937|gb|ACM20909.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
          Length = 139

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 66/133 (49%), Gaps = 11/133 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--------- 59
            I+ S L  +  RM +IS N+ANA +T    G   YRRK   F  V+ G+          
Sbjct: 5   EISASALTAERTRMNLISSNLANANSTRTDEGGQ-YRRKDAVFATVLDGASANMEGGTEV 63

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV V  I  DQS    ++DPGHP A   G V YPNVN++ E ADM    R Y AN   +
Sbjct: 64  IGVEVVNIIEDQSPPRLQYDPGHPDAREDGYVAYPNVNIVEEMADMVTATRAYEANTTAM 123

Query: 119 KQSHDMMTTTLDL 131
           K   DM    L++
Sbjct: 124 KAGMDMQMKALEI 136


>gi|291288218|ref|YP_003505034.1| flagellar basal-body rod protein FlgC [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885378|gb|ADD69078.1| flagellar basal-body rod protein FlgC [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 134

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 74/126 (58%), Gaps = 3/126 (2%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVKKIG 67
           +A +G++ Q  R+  IS N+ANA TT    G  PY R+ + F++V+ G  +GGV+V ++ 
Sbjct: 9   VAGTGMSAQRIRISAISANLANANTTRTDDGG-PYVRQDVIFKQVLEGELAGGVKVTEVV 67

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            D+   + +++PGHP A+  G V YPN+N + E  +M E ++ Y AN   +  +  +   
Sbjct: 68  KDEKPPILKYEPGHPDADEEGYVAYPNINPIEEMVNMLEASKSYEANTTVVSTAKQLAMK 127

Query: 128 TLDLLR 133
            L++ R
Sbjct: 128 ALEIGR 133


>gi|109948140|ref|YP_665368.1| flagellar basal body rod protein FlgC [Helicobacter acinonychis
           str. Sheeba]
 gi|109715361|emb|CAK00369.1| flagellar basal-body rod protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 161

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F EV++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEVLNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQIIPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|302874587|ref|YP_003843220.1| flagellar basal-body rod protein FlgC [Clostridium cellulovorans
           743B]
 gi|307690802|ref|ZP_07633248.1| flagellar basal body rod protein FlgC [Clostridium cellulovorans
           743B]
 gi|302577444|gb|ADL51456.1| flagellar basal-body rod protein FlgC [Clostridium cellulovorans
           743B]
          Length = 143

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 13/139 (9%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--------- 57
           S  I++SGL+ +  RM I+S NIAN  TT    G  PY+RK   F+E +           
Sbjct: 6   SMRISSSGLSAERLRMDIVSSNIANVNTTRTEDGG-PYKRKIGMFQENVDKYLDSTTGKY 64

Query: 58  ---SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              S GV+  KI  D+S     +DP HP A+  G V  PN+N+L E AD+  ++R Y AN
Sbjct: 65  ESRSLGVKATKIVEDESALKRSYDPSHPDADEQGYVTMPNINILNEMADLIASSRAYEAN 124

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           +  I     + T  L++ R
Sbjct: 125 VTAITAQKGIFTKALEIGR 143


>gi|302878274|ref|YP_003846838.1| flagellar basal-body rod protein FlgC [Gallionella
           capsiferriformans ES-2]
 gi|302581063|gb|ADL55074.1| flagellar basal-body rod protein FlgC [Gallionella
           capsiferriformans ES-2]
          Length = 134

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKK 65
           ++A SG+A QS R+ +++ N+ANA +T    G  PYR K + F     GS    GV+V +
Sbjct: 8   NVAGSGMAAQSQRLNVVASNLANADSTTGADGK-PYRAKQVVFSATPMGSTDVQGVKVVR 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D S     +DP HP+A+A G V  PNVNV+ E  +M   +R Y  N+  +  S  ++
Sbjct: 67  VAEDTSPMKIVYDPKHPMADAKGYVSMPNVNVVDEMVNMISASRAYQNNVDVLNTSKTLL 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 LKTLTI 132


>gi|238755326|ref|ZP_04616669.1| Flagellar basal-body rod protein flgC [Yersinia ruckeri ATCC 29473]
 gi|238706462|gb|EEP98836.1| Flagellar basal-body rod protein flgC [Yersinia ruckeri ATCC 29473]
 gi|253317693|gb|ACT22782.1| flagellar basal body rod protein FlgC [Yersinia ruckeri]
          Length = 134

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVMHGS---GGVRVKK 65
           IA S L+ QS RM + + N+ANA + TG  P   PYR K + F+    G+   GGVRV +
Sbjct: 9   IAGSALSAQSQRMNVSASNMANADSVTG--PDGQPYRAKQVVFQVANQGAQETGGVRVAQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  D S     F PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  +  MM
Sbjct: 67  IVEDTSPDRLVFQPGNPLADAKGYVRMPNVDVVGEMVNTISASRSYQANVEVLNTTKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|238924172|ref|YP_002937688.1| flagellar basal body rod protein [Eubacterium rectale ATCC 33656]
 gi|238875847|gb|ACR75554.1| flagellar basal body rod protein [Eubacterium rectale ATCC 33656]
 gi|291524901|emb|CBK90488.1| flagellar basal-body rod protein FlgC [Eubacterium rectale DSM
           17629]
          Length = 146

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 16/143 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
           L  + +I+ SG+  +  R  II++NIAN  TT    G+ PYRRK ++F E        ++
Sbjct: 3   LFQAFNISASGMTAERFRTDIIAQNIANVNTTSTKEGT-PYRRKIVTFSEKNVTPFSQIY 61

Query: 57  GSG-------GVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S        GV+V  +  D ST F++E+DP +P A+A G V YPNVN + E  ++ +  
Sbjct: 62  SSSKKAAVGNGVKVSSVTSDYSTDFIKEYDPSNPDADADGYVSYPNVNTVTEMTNLIDAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN    + S  M    L +
Sbjct: 122 RAYEANATAFEASKSMAQNGLQI 144


>gi|15612531|ref|NP_224184.1| flagellar basal body rod protein FlgC [Helicobacter pylori J99]
 gi|4156087|gb|AAD07040.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99]
          Length = 161

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     +   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFRAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQIIPYEDPLDEGDDNPLIPITSVVVDKIARDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|317014993|gb|ADU82429.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           Gambia94/24]
          Length = 161

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     +   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFRAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQITPYEDPLDEGDDNPLIPITSVVVDKIARDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|253702510|ref|YP_003023699.1| flagellar basal-body rod protein FlgC [Geobacter sp. M21]
 gi|251777360|gb|ACT19941.1| flagellar basal-body rod protein FlgC [Geobacter sp. M21]
          Length = 145

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI----------- 49
           MD+   S  I+ + LA +  RM +IS N+AN  +T    G  PYRRK             
Sbjct: 1   MDFFT-SMDISATALAAERTRMNLISSNLANVNSTRTAEGG-PYRRKDAVFTATPLKEGA 58

Query: 50  SFEEVMHGSGGVR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           SF   +  + G R   V +I  DQ     +++P HP A+ +G V YPN+NV+ E ADM  
Sbjct: 59  SFGAALSKAAGARSVQVTQINEDQRPPRLQYEPSHPDADPNGYVAYPNINVVEEMADMIT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+   + S  M   TL+L+R
Sbjct: 119 ASRSYEANITATQASKSMALKTLELMR 145


>gi|317011794|gb|ADU85541.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           SouthAfrica7]
          Length = 161

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQIIPYEDPLDESDDTPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|15646165|ref|NP_208349.1| flagellar basal body rod protein FlgC [Helicobacter pylori 26695]
 gi|217031711|ref|ZP_03437215.1| hypothetical protein HPB128_155g24 [Helicobacter pylori B128]
 gi|298737153|ref|YP_003729683.1| flagellar basal-body rod protein FlgC [Helicobacter pylori B8]
 gi|2314741|gb|AAD08598.1| flagellar basal-body rod protein (flgC) [Helicobacter pylori 26695]
 gi|216946558|gb|EEC25158.1| hypothetical protein HPB128_155g24 [Helicobacter pylori B128]
 gi|298356347|emb|CBI67219.1| flagellar basal-body rod protein FlgC [Helicobacter pylori B8]
          Length = 161

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQITPYEDPLDEGDEYPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|317010250|gb|ADU80830.1| flagellar basal body rod protein FlgC [Helicobacter pylori India7]
          Length = 161

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQITPYEDPLDEGDDNSLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|308064340|gb|ADO06227.1| flagellar basal body rod protein FlgC [Helicobacter pylori Sat464]
          Length = 161

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQIAPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|229544391|ref|ZP_04433449.1| flagellar basal-body rod protein FlgC [Bacillus coagulans 36D1]
 gi|229324876|gb|EEN90553.1| flagellar basal-body rod protein FlgC [Bacillus coagulans 36D1]
          Length = 149

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 75/140 (53%), Gaps = 17/140 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTI-------SFEEV---- 54
           +I++  L+ Q  RM +IS NIANA TT DT       PYRRK +       SF  +    
Sbjct: 8   NISSEALSAQRLRMDVISSNIANADTTRDTYVNGKWQPYRRKEVVLAAGGGSFASIFRSK 67

Query: 55  --MHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
             M G+G GV+V  I  D S F +E++P  P A+A+G V  PNV++L E   M    R Y
Sbjct: 68  LGMQGAGSGVQVAGIVEDNSDFKKEYNPDDPDADANGYVTKPNVDLLTEMTGMISATRSY 127

Query: 112 MANLQTIKQSHDMMTTTLDL 131
            AN+  +  S  M+  TL+L
Sbjct: 128 EANVTALNASKAMLMKTLEL 147


>gi|149195179|ref|ZP_01872270.1| flagellar basal-body rod protein C [Caminibacter mediatlanticus
           TB-2]
 gi|149134731|gb|EDM23216.1| flagellar basal-body rod protein C [Caminibacter mediatlanticus
           TB-2]
          Length = 165

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 34/163 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-----TISFEEVMHGS 58
            + S  I+  GL+ Q  R+ IISENIANA TT  TP   PYRRK      I FE++++  
Sbjct: 3   FLNSFDISGYGLSAQRFRINIISENIANANTTR-TPEGGPYRRKEVIFKAIPFEDILNKE 61

Query: 59  ----------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
                                         V V KI  D S  + +++P +P ANA G V
Sbjct: 62  IENSANFHKYENPLDEEGEDYKVAKPPIETVIVDKIVRDDSKPILKYEPDNPDANADGYV 121

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            YPN+N ++E AD+ E  R Y AN+   + + +M  + +++L+
Sbjct: 122 AYPNINPVIEMADLIEATRSYQANVAAFQSAKNMAQSAINILQ 164


>gi|210135737|ref|YP_002302176.1| flagellar basal body rod protein FlgC [Helicobacter pylori P12]
 gi|210133705|gb|ACJ08696.1| flagellar basal-body rod protein FlgC [Helicobacter pylori P12]
          Length = 161

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|253990129|ref|YP_003041485.1| flagellar basal body rod protein FlgC [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|211639034|emb|CAR67648.1| flagellar basal-body rod protein flgc (putative proximal rod
           protein) [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781579|emb|CAQ84742.1| flagellar basal-body rod protein flgc (putative proximal rod
           protein) [Photorhabdus asymbiotica]
          Length = 134

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           L++   IA S L+ QS R+ + + N+ANA +    P   PYR K + F         +GG
Sbjct: 3   LLSVFDIAGSALSAQSQRLNVSASNMANADSVAG-PDGQPYRAKQVVFRVAAPAGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV +I  D + F  E+ PGHP+A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVSEIVDDPTPFRLEYQPGHPLADEKGYVRMPNVDVVGEMINTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDL 131
           +  +M  TL L
Sbjct: 122 TKSLMLKTLTL 132


>gi|332799171|ref|YP_004460670.1| flagellar basal-body rod protein FlgC [Tepidanaerobacter sp. Re1]
 gi|332696906|gb|AEE91363.1| flagellar basal-body rod protein FlgC [Tepidanaerobacter sp. Re1]
          Length = 143

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 68/136 (50%), Gaps = 12/136 (8%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-----------M 55
           S  I+ SGL  Q  R+  IS NIANA TT    G  P++R+ + F+E             
Sbjct: 6   SLDISASGLTAQRLRLDTISNNIANANTTRTEEGG-PFQRERVVFQERNTTGSFSNYLDQ 64

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GVRV  I  D + F   +DP HP A+ SG V  PNVN++ E  DM    R Y AN+
Sbjct: 65  QKPAGVRVVAIEKDTAPFKALYDPTHPDADPSGYVMLPNVNIVTEMVDMISATRSYEANV 124

Query: 116 QTIKQSHDMMTTTLDL 131
             I  +  MM+  L++
Sbjct: 125 TAINSAKSMMSKALEI 140


>gi|261840251|gb|ACY00017.1| flagellar basal body rod protein FlgC [Helicobacter pylori 52]
 gi|332674370|gb|AEE71187.1| flagellar basal-body rod protein FlgC [Helicobacter pylori 83]
          Length = 161

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQIAPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|317182784|dbj|BAJ60568.1| flagellar basal body rod protein FlgC [Helicobacter pylori F57]
          Length = 161

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQITPYEDPLDESDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|108563932|ref|YP_628248.1| flagellar basal body rod protein FlgC [Helicobacter pylori HPAG1]
 gi|188528350|ref|YP_001911037.1| flagellar basal body rod protein FlgC [Helicobacter pylori Shi470]
 gi|217033829|ref|ZP_03439254.1| hypothetical protein HP9810_877g33 [Helicobacter pylori 98-10]
 gi|107837705|gb|ABF85574.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
 gi|188144590|gb|ACD49007.1| flagellar basal body rod protein FlgC [Helicobacter pylori Shi470]
 gi|216943727|gb|EEC23170.1| hypothetical protein HP9810_877g33 [Helicobacter pylori 98-10]
 gi|308062841|gb|ADO04729.1| flagellar basal body rod protein FlgC [Helicobacter pylori Cuz20]
 gi|315585965|gb|ADU40346.1| flagellar basal-body rod protein FlgC [Helicobacter pylori 35A]
 gi|317013372|gb|ADU83980.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           Lithuania75]
 gi|317179760|dbj|BAJ57548.1| flagellar basal body rod protein FlgC [Helicobacter pylori F30]
 gi|317181261|dbj|BAJ59047.1| flagellar basal body rod protein FlgC [Helicobacter pylori F32]
          Length = 161

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|297380732|gb|ADI35619.1| flagellar basal-body rod protein FlgC [Helicobacter pylori v225d]
          Length = 161

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQITPYEDPLDEGDNNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|261838846|gb|ACX98612.1| flagellar basal-body rod protein [Helicobacter pylori 51]
          Length = 161

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQITPYENPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|182412250|ref|YP_001817316.1| flagellar basal-body rod protein FlgC [Opitutus terrae PB90-1]
 gi|177839464|gb|ACB73716.1| flagellar basal-body rod protein FlgC [Opitutus terrae PB90-1]
          Length = 139

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 9/136 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSG--- 59
           LI+   I    L  Q  R+ ++++NIANA+TT  TP   PY+R+ +SFE E++   G   
Sbjct: 3   LISGIDITAGALNAQKTRLDMVAQNIANAQTT-RTPNGGPYQRQVVSFETELVRREGLSG 61

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                V+V  +  D+S   + F+P HP A   G+V  PNVN+  E  D+   +R Y ANL
Sbjct: 62  PALQSVKVANVTADRSPGQQVFNPQHPDAGPDGLVTMPNVNLSYEMVDLITASRAYEANL 121

Query: 116 QTIKQSHDMMTTTLDL 131
             ++ +  M   TL +
Sbjct: 122 AVVRNARQMAVKTLQI 137


>gi|317178281|dbj|BAJ56070.1| flagellar basal body rod protein FlgC [Helicobacter pylori F16]
          Length = 161

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQITPYEDPLDEGDDNPLIPITSVMVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVVAFQSAKNMAQNAIGMLQ 160


>gi|312879581|ref|ZP_07739381.1| flagellar basal-body rod protein FlgC [Aminomonas paucivorans DSM
           12260]
 gi|310782872|gb|EFQ23270.1| flagellar basal-body rod protein FlgC [Aminomonas paucivorans DSM
           12260]
          Length = 139

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 8/131 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE----VMHG---SGGVR 62
           +A S L      M  +S N+AN  TT  TP   PY RK   F+E     M G   S GVR
Sbjct: 9   VAGSALTAHRLWMDTVSSNLANVNTT-RTPSGGPYVRKVPIFQEKLMEAMKGAPSSSGVR 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V +I  D       + P HP ANA G V YPNVNV+ E ADM   +R Y A++  ++   
Sbjct: 68  VAEIAKDPLPPRMVYQPDHPDANAEGYVAYPNVNVVREMADMLVASRAYEASVNVVETGK 127

Query: 123 DMMTTTLDLLR 133
            + T+ L+++R
Sbjct: 128 ALWTSALEIMR 138


>gi|51246506|ref|YP_066390.1| flagellar basal body rod protein (FlgC) [Desulfotalea psychrophila
           LSv54]
 gi|50877543|emb|CAG37383.1| probable flagellar basal body rod protein (FlgC) [Desulfotalea
           psychrophila LSv54]
          Length = 143

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 74/142 (52%), Gaps = 13/142 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------EVMH 56
           ++ S  I++S L  QS R+  IS NIANA TT  TP   PY++K++ F+       E ++
Sbjct: 3   ILNSFKISSSALKAQSIRLDTISSNIANAETTS-TPEGGPYKKKSVYFQAKPLTFAEQLN 61

Query: 57  GS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           GS      GV V  I  D+S   + +DP HP A   G V  PNV+ L E  DM    R Y
Sbjct: 62  GSLNAKTTGVEVINIIEDKSEPRKVYDPSHPDAGKDGYVDMPNVDTLKEMVDMMSATRSY 121

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I+ +  M    L++ R
Sbjct: 122 QANVTAIQSAKRMALKALEIGR 143


>gi|283853239|ref|ZP_06370490.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. FW1012B]
 gi|283571344|gb|EFC19353.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. FW1012B]
          Length = 146

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 14/144 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SFEEV 54
           L  +  I +SG++ Q   M  IS N+AN +TT    G+ PY RK++          F + 
Sbjct: 3   LFTALDIGSSGMSAQRTLMNTISMNLANIKTTRTVNGAGPYVRKSVMLESTPVDAPFSKA 62

Query: 55  MHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
           M  +      GV+V  +  D   F  +++PGHP ANA G V YP++NV+ E A+M    R
Sbjct: 63  MQSAQDRDLAGVKVTGLVNDNRPFRMQYEPGHPDANADGYVAYPDINVVEEMANMITAMR 122

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y A+  +I    +M T  LD+ R
Sbjct: 123 SYEASSSSIGTVKNMFTKALDIGR 146


>gi|302342345|ref|YP_003806874.1| flagellar basal-body rod protein FlgC [Desulfarculus baarsii DSM
           2075]
 gi|301638958|gb|ADK84280.1| flagellar basal-body rod protein FlgC [Desulfarculus baarsii DSM
           2075]
          Length = 147

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 74/149 (49%), Gaps = 18/149 (12%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI----------- 49
           MD+ + S  I+ SGL+ Q  R+ IIS+N+ANA TT    G  PYRR+             
Sbjct: 1   MDF-VTSMEISASGLSAQRTRLNIISQNLANAETTRTAEGG-PYRRRVTVMSAQPFVSHL 58

Query: 50  -----SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                S  +      GV V +I  D S F +  DP HP A+A G V YPNV+V+ E  ++
Sbjct: 59  EQAIDSPPQQQDPRKGVLVNEIAQDNSPFKKVHDPSHPDADADGYVLYPNVDVVTEMVNL 118

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  +  S +M    L++ R
Sbjct: 119 ISATRSYEANVSAVGASKNMALKALEIAR 147


>gi|297569162|ref|YP_003690506.1| flagellar basal-body rod protein FlgC [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925077|gb|ADH85887.1| flagellar basal-body rod protein FlgC [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 144

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 17/147 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           MD L A   I+ S L  + +R+ + S N+ANA TT    G  PYR K++ FE        
Sbjct: 1   MDILTAM-KISGSALKAERSRLNVASMNLANANTTRTMEGG-PYRAKSVVFEAKPLDRDF 58

Query: 54  --VMHGSGGVRVKKIGV-----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
              + G+   R++K+ V     DQ+ F E +DP HP A+ +GIV+YPNVNV  +  DM  
Sbjct: 59  GAALQGAAS-RLRKVEVVEVVEDQAPFREVYDPAHPDADENGIVRYPNVNVAEQMVDMMN 117

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  ++   +M    +D+ R
Sbjct: 118 ARRSYEANVAALEAVKEMAARAMDISR 144


>gi|256830790|ref|YP_003159518.1| flagellar basal-body rod protein FlgC [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579966|gb|ACU91102.1| flagellar basal-body rod protein FlgC [Desulfomicrobium baculatum
           DSM 4028]
          Length = 145

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD++ A   +  S L  +   + +IS N+ANA+TT    G  PYRRK + F+E    S  
Sbjct: 1   MDFMTA-IDVGASALKAERTHLNVISMNLANAKTTRTVDGG-PYRRKEVVFKETEVQSPF 58

Query: 59  ------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GVRV+ +  D+    + ++PGHP A+  G V YP++NV+ E  +M  
Sbjct: 59  SKAMNSALDQDVKGVRVESVQNDRRPLKQVYEPGHPDADEEGYVSYPDINVVEEMTNMLS 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+ TI  S  M +  L++ R
Sbjct: 119 AMRAYEANVSTITTSKSMFSKALEIGR 145


>gi|268680292|ref|YP_003304723.1| flagellar basal-body rod protein FlgC [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618323|gb|ACZ12688.1| flagellar basal-body rod protein FlgC [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 163

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M YL +S  I++ GL+ Q  RM +IS NIANA TT  + G  PY+RK + F+ V      
Sbjct: 1   MAYL-SSFDISSYGLSAQRFRMDLISSNIANANTTRTSEGG-PYQRKDVVFKAVDFSKTL 58

Query: 60  -------------------------------GVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V K+  D+S F  +++P HP AN  G
Sbjct: 59  NEKIAENNNMLEYENPLDDAFLQENANPAIMSVVVDKVVRDESEFTYKYEPSHPDANEEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N ++E A++ E  R Y AN+   + +  +  + +D+L+
Sbjct: 119 YVAYPNINPVIEMANLIEATRAYQANVSAFQSAKAIAQSAIDILK 163


>gi|239817167|ref|YP_002946077.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
 gi|239803744|gb|ACS20811.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
          Length = 138

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 67/125 (53%), Gaps = 4/125 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKKI 66
           +A S +A QS RM + + N+ANA +    P   PYR K + FE    G    GGV+V  +
Sbjct: 13  VAGSAMAAQSQRMNVTASNLANAESVAG-PDGKPYRAKQVVFEVDASGQQDIGGVKVAGV 71

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D S     FDP +P A+A G V  PNVNV+ E  +M   +R Y AN++ +  +  +M 
Sbjct: 72  IEDPSPLKMVFDPKNPHADAKGYVAMPNVNVVEEMTNMISASRSYQANVEVLNTAKTLMV 131

Query: 127 TTLDL 131
            TL +
Sbjct: 132 KTLSI 136


>gi|319790422|ref|YP_004152055.1| flagellar basal-body rod protein FlgC [Thermovibrio ammonificans
           HB-1]
 gi|317114924|gb|ADU97414.1| flagellar basal-body rod protein FlgC [Thermovibrio ammonificans
           HB-1]
          Length = 135

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 68/130 (52%), Gaps = 7/130 (5%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR-----V 63
            ++ +G+  Q  RM + + N+ANA +  D     PYRR+   FE V+    GV+     V
Sbjct: 7   EVSVTGMLAQRVRMDVAASNLANANSVDD--NGQPYRRRVPIFEAVLDEVNGVKTYRVKV 64

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           KKI  D S F + +DP +P+A   G V  PNV+ L E  DM    R Y ANL       +
Sbjct: 65  KKIVEDPSPFRKIYDPSNPLAGPDGYVTLPNVDPLREMVDMISAMRSYEANLTAFNTRKN 124

Query: 124 MMTTTLDLLR 133
           M+  T+D+L+
Sbjct: 125 MIVNTIDILK 134


>gi|34557980|ref|NP_907795.1| flagellar basal body rod protein FlgC [Wolinella succinogenes DSM
           1740]
 gi|34483698|emb|CAE10695.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGC PROXIMAL ROD PROTEIN
           [Wolinella succinogenes]
          Length = 164

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 33/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-----SFEEVMHGS 58
            ++S  I+  GL+ Q  R+ +IS NIANA TT    G  PYRRK +      F+EV++  
Sbjct: 3   FLSSFDISGYGLSAQRFRVNMISSNIANANTTRTDEGG-PYRRKEVIFKAFDFDEVLNQK 61

Query: 59  GG---------------------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
            G                           V V K+  D S    +++P HP AN+ G V 
Sbjct: 62  LGENNNLLKYEDPLDEDEWGLEPKPSIMSVYVDKVVRDDSQPRMKYEPSHPDANSEGYVA 121

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           YPN+N +VE AD+ E  R Y AN+   + + +M +T L + +
Sbjct: 122 YPNINPVVEMADLIEATRAYQANVSAFQSAKNMASTALTMFQ 163


>gi|85058009|ref|YP_453711.1| flagellar basal body rod protein FlgC [Sodalis glossinidius str.
           'morsitans']
 gi|84778529|dbj|BAE73306.1| flagellar basal-body rod protein FlgC [Sodalis glossinidius str.
           'morsitans']
          Length = 134

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           I+ S L  QS R+ + + N+ANA + TG  P  +PYR K + F+    +    GGVRV +
Sbjct: 9   ISGSALMAQSQRLNVSASNMANADSVTG--PDGEPYRAKQVVFQLDAALGQPVGGVRVSQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D + +   +DPGHP+AN  G ++ PNVN + E  +    +R Y AN++ I  +  MM
Sbjct: 67  VVEDPAPWRLVYDPGHPLANDRGYIRMPNVNRVAEMVNTLSASRSYQANVEVINSARSMM 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 MKTLAM 132


>gi|310641541|ref|YP_003946299.1| flagellar basal-body rod protein flgc [Paenibacillus polymyxa SC2]
 gi|309246491|gb|ADO56058.1| Flagellar basal-body rod protein FlgC [Paenibacillus polymyxa SC2]
          Length = 150

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 72/142 (50%), Gaps = 18/142 (12%)

Query: 10  IANSGLAVQSARMQIISENIANARTTG---DTPGSDPYRRKTISFE-----------EVM 55
           I+ S L  Q  RM +IS NIANA TT    +   + PYRRKT+  E             M
Sbjct: 9   ISASALTAQRLRMDVISSNIANAETTRAKVENGQAIPYRRKTVVLEPNQSGFADVLKAQM 68

Query: 56  HGS----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            GS     GV+V +I  DQS     ++PGHP A+  G V  PNV+++ E  DM    R Y
Sbjct: 69  EGSSTSAAGVKVSQIQEDQSPLKPVYNPGHPDADKDGYVYMPNVDIMKEMVDMISATRSY 128

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  +  S  M++  L++ R
Sbjct: 129 EANVTALNASKAMVSKALEIGR 150


>gi|308068650|ref|YP_003870255.1| flagellar basal-body rod protein flgC [Paenibacillus polymyxa E681]
 gi|305857929|gb|ADM69717.1| Flagellar basal-body rod protein flgC [Paenibacillus polymyxa E681]
          Length = 150

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 72/142 (50%), Gaps = 18/142 (12%)

Query: 10  IANSGLAVQSARMQIISENIANARTTG---DTPGSDPYRRKTISFE-----------EVM 55
           I+ S L  Q  RM +IS NIANA TT    +   + PYRRKT+  E             M
Sbjct: 9   ISASALTAQRLRMDVISSNIANAETTRAKVENGQAVPYRRKTVVLEPNQSGFADVLKAQM 68

Query: 56  HGS----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            GS     GV+V +I  DQS     ++PGHP A+  G V  PNV+++ E  DM    R Y
Sbjct: 69  EGSSTSAAGVKVSQIQEDQSPLKPVYNPGHPDADKDGYVYMPNVDIMKEMVDMISATRSY 128

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  +  S  M++  L++ R
Sbjct: 129 EANVTALNASKAMVSKALEIGR 150


>gi|306820111|ref|ZP_07453759.1| flagellar basal-body rod protein FlgC [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551889|gb|EFM39832.1| flagellar basal-body rod protein FlgC [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 145

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 71/142 (50%), Gaps = 15/142 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           + +  +I  + L  +  RM IIS+NIANA+TT  T    PY+R+   F+E    S     
Sbjct: 3   IFSGMNINATALTAERLRMDIISKNIANAQTT-RTKNGLPYKRQVAVFKEAEGDSSFKSV 61

Query: 59  ---------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                    GGV V  I  D+S F   +DPGHP A+ +G VK PNV ++ E  DM    R
Sbjct: 62  LENKRKKDTGGVEVVGIVEDKSDFKLRYDPGHPDADENGYVKMPNVELITEMVDMITAQR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            Y AN   +  S  M+   +D+
Sbjct: 122 AYEANATAVNTSKAMLQKAIDI 143


>gi|187935497|ref|YP_001885039.1| flagellar basal body rod protein FlgC [Clostridium botulinum B str.
           Eklund 17B]
 gi|187723650|gb|ACD24871.1| flagellar basal-body rod protein FlgC [Clostridium botulinum B str.
           Eklund 17B]
          Length = 135

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 3/128 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRV 63
           S  I+ +G++ +  RM  I+ N+ N+ TT    GS PY RK   F+E +  +    G++ 
Sbjct: 6   SMQISATGISAERLRMDTITSNMTNSSTTRSADGSGPYVRKIAVFQEALDENRKMAGIKP 65

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            KI  D+S   + + P HP A+ +G V  PNVNVL E ADM  + R Y AN++T+     
Sbjct: 66  VKIVEDKSPLRKVYKPTHPDADETGYVTMPNVNVLNEMADMMVSTRSYEANVETLNALKG 125

Query: 124 MMTTTLDL 131
           M +  L++
Sbjct: 126 MFSKALEI 133


>gi|292669734|ref|ZP_06603160.1| flagellar basal-body rod protein FlgC [Selenomonas noxia ATCC
           43541]
 gi|292648531|gb|EFF66503.1| flagellar basal-body rod protein FlgC [Selenomonas noxia ATCC
           43541]
          Length = 151

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 68/139 (48%), Gaps = 19/139 (13%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----------- 59
           A SGL  +  RM +IS NIANA TT    G   Y R+ + F+    G+G           
Sbjct: 10  AASGLTAERLRMDVISNNIANANTT-RAQGGGAYHRRYVVFQPREKGNGIGFESFLARAS 68

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GVR   I  D+S     ++PGHP ANA G V+ PNVN++ E  DM   +R Y 
Sbjct: 69  DRLRPGDGVRAVSIETDRSQGTLVYEPGHPDANADGYVERPNVNIVAEMVDMISASRGYE 128

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN  TI  +  M+T  L +
Sbjct: 129 ANATTINAAKSMVTAALRI 147


>gi|152980444|ref|YP_001353109.1| FlgC flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
 gi|151280521|gb|ABR88931.1| FlgC flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
          Length = 135

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 5/127 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHG---SGGVRVK 64
           +++ S ++ QS R+ ++S NIANA +T    G   YR K + F+ + M G   S GVRV 
Sbjct: 8   NVSGSAMSAQSQRLNVVSSNIANAESTTSADG-KTYRAKQVEFQAQQMKGGATSTGVRVN 66

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           ++  D S     FDP HP A+ +G V  PNVNV+ E  +M   +R Y  N++T+  +  M
Sbjct: 67  RVVEDTSPLKMVFDPKHPNADETGHVAMPNVNVVEEMVNMISASRSYQTNVETMNTAKTM 126

Query: 125 MTTTLDL 131
           +  TL L
Sbjct: 127 LLKTLTL 133


>gi|307638243|gb|ADN80693.1| Flagellar basal-body rod protein [Helicobacter pylori 908]
 gi|325996836|gb|ADZ52241.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
 gi|325998428|gb|ADZ50636.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
          Length = 161

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     +   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFRAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  ITQNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|168334478|ref|ZP_02692649.1| Flagellar basal body rod protein [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 153

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 23/152 (15%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
             +   IA +GL  Q  R+ +I++N+AN  +T  TP   PY+R+T+ FE +         
Sbjct: 3   FFSGMDIAATGLTAQRFRLDVITQNLANINSTR-TPDGGPYQRRTVLFESIPMRDAANKL 61

Query: 55  -------------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                        M+ + GV+V  I  D + F   FDP HP AN  G V+ PNV+V+ E 
Sbjct: 62  PDNFHNILNRNLNMYHTSGVQVSGIVEDDTPFPLIFDPTHPDANEEGYVEMPNVDVVTEM 121

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +M   +R Y AN+        M T  LDL R
Sbjct: 122 VNMISASRSYEANVTAFNNLKSMNTKALDLGR 153


>gi|308185345|ref|YP_003929478.1| flagellar basal body rod protein FlgC [Helicobacter pylori SJM180]
 gi|308061265|gb|ADO03161.1| flagellar basal body rod protein FlgC [Helicobacter pylori SJM180]
          Length = 161

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     +   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFRAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQIIPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|208435438|ref|YP_002267104.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|308183713|ref|YP_003927840.1| flagellar basal body rod protein FlgC [Helicobacter pylori PeCan4]
 gi|208433367|gb|ACI28238.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|308065898|gb|ADO07790.1| flagellar basal body rod protein FlgC [Helicobacter pylori PeCan4]
          Length = 161

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     +   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFRAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|78776565|ref|YP_392880.1| flagellar basal body rod protein FlgC [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497105|gb|ABB43645.1| Flagellar basal-body rod protein FlgC [Sulfurimonas denitrificans
           DSM 1251]
          Length = 164

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 33/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M   + S  I+  GL+ Q  R+  IS+NIANA+TT    G  PYRRK + F+ +      
Sbjct: 1   MSNFLNSFDISGYGLSAQRVRVNTISQNIANAQTTRTDEGG-PYRRKEVVFKAIDFNQEF 59

Query: 56  ------------------HGSGGVRVK---------KIGVDQSTFVEEFDPGHPVANASG 88
                              G  G RV          KI  D     +++DP HP A+A+G
Sbjct: 60  NKALNGMTESAKYEDPLDEGDFGKRVNPAIMSVVVDKISRDDKEPQKKYDPAHPDADANG 119

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N ++E AD+ E  R Y AN+   + S  +  + + LL+
Sbjct: 120 YVAYPNINPVIEMADLVEATRSYQANVAAFESSKSIANSAISLLQ 164


>gi|260438810|ref|ZP_05792626.1| flagellar basal-body rod protein FlgC [Butyrivibrio crossotus DSM
           2876]
 gi|292808799|gb|EFF68004.1| flagellar basal-body rod protein FlgC [Butyrivibrio crossotus DSM
           2876]
          Length = 145

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 73/143 (51%), Gaps = 15/143 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------------SF 51
           + +  +IA SG+  Q  R  IIS NIANA TT    G  PY R+ +             F
Sbjct: 3   IFSGMNIAASGMTAQRLRTDIISGNIANANTTRTAEGG-PYTRRNVLLTQKTSLNFGDVF 61

Query: 52  EEVMHGSG-GVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
            E + G+G GV+V  I  D  T +   +DP HP A+ +G VKYPNVN++ E  D+ +  R
Sbjct: 62  NETLQGAGNGVKVVAITKDTETDYNLVYDPSHPDADENGYVKYPNVNIVNEMTDLIDATR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLL 132
            Y AN      S  M +  L+L+
Sbjct: 122 SYEANATAFDASKSMASKGLELM 144


>gi|311105933|ref|YP_003978786.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
           A8]
 gi|310760622|gb|ADP16071.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
           A8]
          Length = 139

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------EVMH 56
           L++   IA S L+ QS RM + + N+ANA +    P   PYR + + F+        +  
Sbjct: 3   LLSIFDIAGSALSAQSQRMNVAASNMANADSV-VGPDGKPYRARQVVFQVNPPAGQALGQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GGVRV  +  DQS   + +DP HP+A+A G V  PNV+ + ET +M   +R Y AN++
Sbjct: 62  EIGGVRVAGVIEDQSPLKQVYDPQHPLADAQGYVSMPNVDPVAETVNMIAASRSYQANVE 121

Query: 117 TIKQSHDMMTTTLDL 131
            +  +  +M  TL +
Sbjct: 122 VLNTAKALMQKTLTI 136


>gi|158320510|ref|YP_001513017.1| flagellar basal-body rod protein FlgC [Alkaliphilus oremlandii
           OhILAs]
 gi|158140709|gb|ABW19021.1| flagellar basal-body rod protein FlgC [Alkaliphilus oremlandii
           OhILAs]
          Length = 147

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 77/144 (53%), Gaps = 17/144 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SFEEV 54
           +  S +I+ SGL  +  RM I ++NIANA TT  + G+ PYRR+ +          F E 
Sbjct: 3   IFNSLNISASGLTAERLRMDIATKNIANANTTRTSNGT-PYRRQVVVFKTKDAPTPFSEH 61

Query: 55  MHGSGG-------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           +  SGG       V V  I  D + +   ++PGHP A+ +G VK PNV+++ E A+M   
Sbjct: 62  LKRSGGSPSKMNGVEVSSIQNDTAPYKSVYEPGHPDADENGYVKMPNVDIMTEMANMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
           +R Y AN+  +  +  M   TL++
Sbjct: 122 SRAYEANITAMNGTKSMFLKTLEI 145


>gi|197120201|ref|YP_002140628.1| flagellar basal body rod protein FlgC [Geobacter bemidjiensis Bem]
 gi|197089561|gb|ACH40832.1| flagellar basal body rod protein FlgC [Geobacter bemidjiensis Bem]
          Length = 145

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 73/147 (49%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   S  I+ + LA +  RM +IS N+AN  +T    G  PYRRK   F       G 
Sbjct: 1   MDFFT-SMDISATALAAERTRMNLISSNLANVNSTRTAEGG-PYRRKDAVFTATPLKEGA 58

Query: 61  --------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                         V+V +I  D      +++PGHP A+ +G V YPN+NV+ E ADM  
Sbjct: 59  SFGAALSQATSARSVQVTQIKEDPRPPRLQYEPGHPDADPNGYVAYPNINVVEEMADMIT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+   + S  M   TL+L+R
Sbjct: 119 ASRSYEANITATQASKSMALKTLELMR 145


>gi|323705448|ref|ZP_08117023.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535350|gb|EGB25126.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 149

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 18/145 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
            + S  I+ +GL  +  RM +IS+NIAN  TT  + G  PYRRK +  +E+ + S     
Sbjct: 3   FLNSIDISATGLTAERLRMDVISQNIANVDTTRTSNGG-PYRRKLVVLKEIDNQSSFSDM 61

Query: 60  ------------GVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                       GV V  I  D  T F   +DPG+P A+++G V YPNVN++ E  DM  
Sbjct: 62  LNAAKGSSTVGNGVEVVSIEEDNKTPFNRVYDPGNPDADSTGYVNYPNVNIVSEMVDMIS 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R Y AN+  +  +  M+   L++
Sbjct: 122 ATRAYEANVTAVNSTKSMIEKALEI 146


>gi|304316910|ref|YP_003852055.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778412|gb|ADL68971.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 149

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 18/145 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SFEEV 54
            + S  I+ +GL  +  RM +IS+NIAN  TT  + G  PYRRK +         SF ++
Sbjct: 3   FLNSIDISATGLTAERLRMDVISQNIANVDTTRTSNGG-PYRRKLVVLKEIDNQNSFSDM 61

Query: 55  MHGSGGVRVKKIGVDQSTFVEE--------FDPGHPVANASGIVKYPNVNVLVETADMRE 106
           ++ + G++    GV+  + V++        +DPG+P A+ +G V YPNVN++ E  DM  
Sbjct: 62  LNTAKGIQAVGNGVEVVSIVDDNKTPLNRVYDPGNPDADNTGYVNYPNVNIVSEMVDMIS 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R Y AN+  +  +  M+   L++
Sbjct: 122 ATRAYEANVTAVNSAKSMIEKALEI 146


>gi|315452789|ref|YP_004073059.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
 gi|315131841|emb|CBY82469.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
          Length = 163

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 33/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT    G  PYRR     K+  F ++++  
Sbjct: 2   FLSSFDISGYGLSAQRVRANLISSNIANANTTRTDEGG-PYRRQEAIFKSFDFNKILNEK 60

Query: 59  ---------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
                                       GV ++KI  D    + ++DP HP A+A+G V 
Sbjct: 61  LAQNNNLMEYEDPLDESDEIEKPNPPITGVYIEKIVRDDKAPLLKYDPTHPDADANGYVS 120

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           YPNVN +VE AD+ E  R Y AN+   + + +M T  + +L+
Sbjct: 121 YPNVNPVVEMADLIEATRAYQANVAAFQSTKNMATNAIGMLQ 162


>gi|313895871|ref|ZP_07829425.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312975296|gb|EFR40757.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 151

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 68/139 (48%), Gaps = 19/139 (13%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----------- 59
           A SGL  +  RM +IS NIANA TT    G   Y R+ + F+    G+G           
Sbjct: 10  AASGLTAERLRMDVISNNIANANTT-RAQGGGAYHRRYVVFQPREKGNGIGFESFLARAS 68

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GVR   I  D+S  V  ++PGHP ANA G V+ PNVN++ E  DM   +R Y 
Sbjct: 69  ERMRPGDGVRALSIETDRSPGVLVYEPGHPDANAEGYVERPNVNIVSEMVDMISASRGYE 128

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN  TI  +  M+   L +
Sbjct: 129 ANATTINAAKSMVNAALRI 147


>gi|325295411|ref|YP_004281925.1| flagellar basal-body rod protein FlgC [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065859|gb|ADY73866.1| flagellar basal-body rod protein FlgC [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 135

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 7/126 (5%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-----VRVKKIG 67
           +G+ VQ  R+ I S N+ANA +  +    +PYRRK   FE V+  +       V+VKKI 
Sbjct: 11  TGMEVQRVRIDIHSSNLANANSVDE--NGNPYRRKIPIFESVLEKTAKGEIYRVKVKKIV 68

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            D S +  ++DP +P+A+ +G VK PNV+ + E  DM    R Y ANL        M+  
Sbjct: 69  EDPSPYKLKYDPSNPLADKNGYVKLPNVDPIREMVDMISAMRTYEANLTAFNTHKGMLLN 128

Query: 128 TLDLLR 133
            +D+L+
Sbjct: 129 AIDILK 134


>gi|254780090|ref|YP_003058197.1| flagellar basal body rod protein FlgC [Helicobacter pylori B38]
 gi|254002003|emb|CAX30262.1| Flagellar basal-body rod protein FlgC [Helicobacter pylori B38]
          Length = 161

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 74/160 (46%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIAN  TT  + G  PYRR     K   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANVNTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQIIPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|260886629|ref|ZP_05897892.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
 gi|330839539|ref|YP_004414119.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
 gi|260863772|gb|EEX78272.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
 gi|329747303|gb|AEC00660.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
          Length = 147

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 66/135 (48%), Gaps = 17/135 (12%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--------------- 57
           SGL  +  RM +IS NIANA TT    G  PY R+ + F+    G               
Sbjct: 12  SGLTAERLRMDVISNNIANANTTRSVEGG-PYHRRYVVFQPRERGKEDFASTLRQKLDNQ 70

Query: 58  -SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GVR  KI  D+S     +DPGHP ANA G V+ PN+N++ E  DM   +R Y AN+ 
Sbjct: 71  AGNGVRAMKIEEDRSQGPLVYDPGHPDANADGYVERPNINIVQEMVDMITASRAYEANVT 130

Query: 117 TIKQSHDMMTTTLDL 131
            I  +  M    L++
Sbjct: 131 AINAAKGMAQNALNI 145


>gi|188997545|ref|YP_001931796.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932612|gb|ACD67242.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 136

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     I+ SG+  +  R+ + + N+AN  +T  T    PYRRK   FE V+        
Sbjct: 2   LFKGLEISVSGMQAERVRIDLAASNLANVNSTH-TENGQPYRRKVPVFEAVLDAQSQIPV 60

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRVK I  D S F  +FDP +P A   G V+ PNV+ + E  DM    R Y ANL   
Sbjct: 61  YKVRVKDIQEDPSPFKLKFDPNNPDAGPDGYVRLPNVDPIREMVDMMTAMRTYEANLTAF 120

Query: 119 KQSHDMMTTTLDLLR 133
               DM+  +L+++R
Sbjct: 121 NTHKDMLIKSLEIIR 135


>gi|310659047|ref|YP_003936768.1| flagellar component of cell-proximal portion of basal-body rod
           [Clostridium sticklandii DSM 519]
 gi|308825825|emb|CBH21863.1| flagellar component of cell-proximal portion of basal-body rod
           [Clostridium sticklandii]
          Length = 146

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 16/143 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
           + +S +I+ S L  +  RM +IS+N+ANA TT    G DPYRR+ + F+E          
Sbjct: 3   IFSSINISASALTAERTRMDVISKNLANANTTRTQSG-DPYRRQVVVFKEADEKQSFKSI 61

Query: 55  ------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                   G  GV +  I  D++ F + ++PGHP A+  G V   NV+ + E  DM    
Sbjct: 62  FESKKSKDGDKGVEIVGIVEDKTPFRQVYNPGHPDADEKGYVTMSNVDTITEMVDMISAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN+  +  S  M+   L++
Sbjct: 122 RSYEANVTALNTSKSMLLKALEI 144


>gi|320529387|ref|ZP_08030475.1| flagellar basal-body rod protein FlgC [Selenomonas artemidis F0399]
 gi|320138353|gb|EFW30247.1| flagellar basal-body rod protein FlgC [Selenomonas artemidis F0399]
          Length = 151

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 68/139 (48%), Gaps = 19/139 (13%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----------- 59
           A SGL  +  RM +IS NIANA TT    G   Y R+ + F+    G+G           
Sbjct: 10  AASGLTAERLRMDVISNNIANANTT-RAQGGGAYHRRYVVFQPREKGNGIGFESFLARAS 68

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GVR   I  D+S  V  ++PGHP ANA G V+ PNVN++ E  DM   +R Y 
Sbjct: 69  ERMRPGDGVRALSIETDRSPGVLVYEPGHPDANAEGYVERPNVNIVSEMVDMISASRGYE 128

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN  TI  +  M+   L +
Sbjct: 129 ANTTTINAAKSMVNAALRI 147


>gi|46578731|ref|YP_009539.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603705|ref|YP_968105.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris DP4]
 gi|46448143|gb|AAS94798.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563934|gb|ABM29678.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris DP4]
 gi|311232603|gb|ADP85457.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris RCH1]
          Length = 145

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 74/147 (50%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SF 51
           MD++ A   I  S L  +   M IIS N+ANA+TT    G  PYRRKT           F
Sbjct: 1   MDFMTA-LDIGASALTAERTNMNIISMNLANAKTTRTAEGG-PYRRKTTIMAATEVDGPF 58

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            + M  +      GVRV  +  DQ  F   ++PGHP A+  G V YP++NV+ E A++  
Sbjct: 59  SKQMESALDRELRGVRVMNVVRDQRPFKRVYEPGHPDADQQGFVSYPDINVVEEMANLMT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+ T+     M +  L++ R
Sbjct: 119 AQRGYEANVTTVDTVKAMYSKALEIGR 145


>gi|26991079|ref|NP_746504.1| flagellar basal body rod protein FlgC [Pseudomonas putida KT2440]
 gi|24986114|gb|AAN69968.1|AE016635_4 flagellar basal-body rod protein FlgC [Pseudomonas putida KT2440]
 gi|313497759|gb|ADR59125.1| FlgC [Pseudomonas putida BIRD-1]
          Length = 147

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK----TISFEEVMHGSG----- 59
           +IA SG++ Q+ R+  ++ NIANA T   +     YR +      +F+    GS      
Sbjct: 8   NIAGSGMSAQNTRLNTVASNIANAETVSSSI-DQTYRARHPVFATTFQNAQAGSSQSLFE 66

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+VK I  DQST    ++P HP AN  G V YPNVNV+ E ADM   +R + 
Sbjct: 67  DQGEAGQGVQVKGIVEDQSTLEARYEPNHPAANKDGYVYYPNVNVVEEMADMISASRAFQ 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N + +  + +MM   L L
Sbjct: 127 TNAELMNTAKNMMQKVLTL 145


>gi|322379367|ref|ZP_08053738.1| flagellar basal body rod protein FlgC [Helicobacter suis HS1]
 gi|322380862|ref|ZP_08054952.1| flagellar basal body rod protein FlgC [Helicobacter suis HS5]
 gi|321146713|gb|EFX41523.1| flagellar basal body rod protein FlgC [Helicobacter suis HS5]
 gi|321148185|gb|EFX42714.1| flagellar basal body rod protein FlgC [Helicobacter suis HS1]
          Length = 165

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 33/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVM 55
           M   ++S  I+  GL+ Q  R  +IS NIANA TT    G  PYRR     K+  F +V+
Sbjct: 1   MRMFLSSFDISGYGLSAQRVRANLISSNIANANTTRTDEGG-PYRRQEAVFKSFDFNKVL 59

Query: 56  HGS---------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +                              GV ++KI  D    + ++DP HP A+A+G
Sbjct: 60  NEKLAKNNDLMEYEDPLDESDEIEKPNPPIMGVYIEKIVRDDKAPLLKYDPSHPDADANG 119

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 120 YVSYPNVNPVVEMADLIEATRAYQANVAAFQSTKNMAANAIGMLQ 164


>gi|170747377|ref|YP_001753637.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653899|gb|ACB22954.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
          Length = 136

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 63/119 (52%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           G  VQS R++ ISEN+ANA +   TPG  PY RK   F  V   S    V +I  D + F
Sbjct: 17  GRQVQSGRIRAISENLANADSVPTTPGGAPYARKIAVFAPVAADSPRDPVGRIARDTTGF 76

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              +DP  P A+ SG V+ PNVN  VE+AD++   R Y  +L        +   T++L+
Sbjct: 77  RTRYDPTSPGADPSGYVRLPNVNSAVESADLQRVVRNYELSLSASASIKTLAQATINLI 135


>gi|331269312|ref|YP_004395804.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
           BKT015925]
 gi|329125862|gb|AEB75807.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
           BKT015925]
          Length = 145

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 13/142 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPG-SDPYRRKTISFEEVMHGSGGVR- 62
            +S  I+ SGL+ +  RM  IS NI N +TT    G  +PYRRK   F+E      G   
Sbjct: 4   FSSLRISASGLSAERLRMDTISSNITNFKTTRGKDGQKEPYRRKIAVFQENFKKELGKNK 63

Query: 63  ---------VKKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                    VK +G+  D+S     ++P HP A+  G V  PNVN+L E ADM    R Y
Sbjct: 64  KGYETSLNGVKAVGIVEDKSPLRRVYNPNHPDADKDGYVLMPNVNILNEMADMIAATRAY 123

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I  S +M    L++ R
Sbjct: 124 EANVTAINSSKNMFMKALEIGR 145


>gi|251780808|ref|ZP_04823728.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243085123|gb|EES51013.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 135

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 70/130 (53%), Gaps = 3/130 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
             S  I+ +G++ +  RM  I+ N+ N+ TT    GS PY RK   F+E +  +    G+
Sbjct: 4   FTSMQISATGISAERLRMDTITSNMTNSSTTRSADGSGPYVRKIAVFQEALDENRKMAGI 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +  KI  D+S F   + P  P A+ +G V  PNVNVL E ADM  + R Y AN++T+   
Sbjct: 64  KPVKIVEDKSPFRRVYKPTDPDADETGYVTMPNVNVLNEMADMMVSTRSYEANVETLNAL 123

Query: 122 HDMMTTTLDL 131
             M +  L++
Sbjct: 124 KGMFSKALEI 133


>gi|148266225|ref|YP_001232931.1| flagellar basal-body rod protein FlgC [Geobacter uraniireducens
           Rf4]
 gi|146399725|gb|ABQ28358.1| flagellar basal-body rod protein FlgC [Geobacter uraniireducens
           Rf4]
          Length = 146

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SF 51
           MD+   S  I++S L  +  RM +IS N+ANA +T    G  PYRRK           SF
Sbjct: 1   MDFFT-SMDISSSALTAERTRMNLISSNLANANSTRTAEGG-PYRRKDAVFSARPVAESF 58

Query: 52  EEVMHGSGG------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
             V   +G       V V +I  DQ+    ++DP HP AN  G V  PNVNV+ E ADM 
Sbjct: 59  SSVFSKTGNRGVPQQVGVVQINEDQNPPRLQYDPTHPDANQQGYVALPNVNVVEEMADMI 118

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+   + +  M   TL+L R
Sbjct: 119 AATRTYEANVTAAQAAKSMAMKTLELGR 146


>gi|116327145|ref|YP_796865.1| flagellar basal body rod protein FlgC [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116332198|ref|YP_801916.1| flagellar basal body rod protein FlgC [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116119889|gb|ABJ77932.1| Endoflagellar proximal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116125887|gb|ABJ77158.1| Endoflagellar proximal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 153

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 20/150 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           L +S +I+ +GL+ Q  RM +IS NIAN+ TT +T G  P+RR  +              
Sbjct: 3   LFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTRWRSP 62

Query: 54  -----VMHGSG-GVRVKKIGVDQSTFVEEFDPGHP----VANASGIVKYPNVNVLVETAD 103
                V  G G GV+V KI  D +     +DP HP    +    G V+ PNVN++ E  D
Sbjct: 63  VYPFGVAPGEGKGVKVMKIEKDMTPLRLVYDPTHPDAIQIGPKKGYVEMPNVNIVTEMTD 122

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN+Q I  S  M    L++ R
Sbjct: 123 MISASRSYEANVQMINGSKAMFNKALEIGR 152


>gi|168698712|ref|ZP_02730989.1| Flagellar basal body rod protein [Gemmata obscuriglobus UQM 2246]
          Length = 144

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 12/140 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L A + I+ +G++ +  RM++I+ NIANA TT    G  PYRR+ + FEE++  + G   
Sbjct: 6   LFAGSAISGTGMSAERLRMEVIANNIANANTTRSANGG-PYRRQDVVFEELLGAAAGPFG 64

Query: 61  -------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                  V V+++  D +       PGHP A+A G V+ PNV + +E  ++    R Y A
Sbjct: 65  GPDLRGVVAVERV-EDPTELPRVHQPGHPDADAEGFVRMPNVQLPIEMVNLLTATRAYEA 123

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           NL+  +    M    L LLR
Sbjct: 124 NLRAAQTFRQMNEQALVLLR 143


>gi|225552253|ref|ZP_03773193.1| flagellar basal-body rod protein FlgC [Borrelia sp. SV1]
 gi|225371251|gb|EEH00681.1| flagellar basal-body rod protein FlgC [Borrelia sp. SV1]
          Length = 152

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L +S ++A++GLA Q  R+ +IS NIAN  +T  TP   PYRR+ I F            
Sbjct: 3   LFSSINVASTGLAAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVNNPYWKGP 61

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANAS----GIVKYPNVNVLVETAD 103
              + + +G G GVRV  I  D+S    ++DP HP + +S    G V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|226321611|ref|ZP_03797137.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi Bol26]
 gi|226232800|gb|EEH31553.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi Bol26]
          Length = 152

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F   ++       
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVNNPYWKGP 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETAD 103
                     S GVRV  I  D+S    ++DP HP + +SG     V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGISQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|260893877|ref|YP_003239974.1| flagellar basal-body rod protein FlgC [Ammonifex degensii KC4]
 gi|260866018|gb|ACX53124.1| flagellar basal-body rod protein FlgC [Ammonifex degensii KC4]
          Length = 137

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 8/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
            I    I+ SGL  +  R+ +++ N+AN  TT  TP   PYRR+   F +V+        
Sbjct: 3   FIDPFRISGSGLTAERLRLDLVANNLANIDTT-RTPAGGPYRRRVPVFAQVLEARKEGMV 61

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GVRV  I  DQS F   +DP HP A  +G V+YPNVNV  E  D+    R Y AN   
Sbjct: 62  GMGVRVVAIVEDQSPFKVVYDPNHPDAQ-NGYVRYPNVNVADEVVDLIGAARAYEANATV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ + +M    +++ R
Sbjct: 121 LETAKEMARQAIEIGR 136


>gi|253682065|ref|ZP_04862862.1| flagellar basal-body rod protein FlgC [Clostridium botulinum D str.
           1873]
 gi|253561777|gb|EES91229.1| flagellar basal-body rod protein FlgC [Clostridium botulinum D str.
           1873]
          Length = 145

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 68/142 (47%), Gaps = 13/142 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTT-GDTPGSDPYRRKTISFEEVMHGS----- 58
            +S  I+ SGL+ +  RM  IS NI N +TT G     +PYRRK   F+E +        
Sbjct: 4   FSSLRISASGLSAERLRMDTISSNITNFKTTRGKDGNKEPYRRKIAVFQENLKKELSKDK 63

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV+   I  D+S     ++P HP A+  G V  PNVN+L E ADM    R Y
Sbjct: 64  KGYETSLNGVKAVGIVEDKSPLRRVYNPNHPDADKDGYVLMPNVNILNEMADMIAATRAY 123

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I  S  M    L++ R
Sbjct: 124 EANVTAINSSKSMFMKALEIGR 145


>gi|238927420|ref|ZP_04659180.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
 gi|238884702|gb|EEQ48340.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
          Length = 151

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 68/139 (48%), Gaps = 19/139 (13%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----------- 59
           A SGL  +  RM +IS NIANA TT  T G   Y R+ + F+    G+G           
Sbjct: 10  AASGLTAERLRMDVISNNIANANTT-RTQGGGAYHRRYVVFQPREKGTGIGFESFLARAS 68

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GVR   I  D +     ++PGHP ANA G V+ PNVN++ E  DM   +R Y 
Sbjct: 69  NRLRPGDGVRAVSIQADNTQGPLVYEPGHPDANADGYVERPNVNIVAEMVDMISASRGYE 128

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN  TI  +  M++  L +
Sbjct: 129 ANTTTINAAKSMVSAALRI 147


>gi|261407986|ref|YP_003244227.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. Y412MC10]
 gi|329929277|ref|ZP_08283030.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. HGF5]
 gi|261284449|gb|ACX66420.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. Y412MC10]
 gi|328936646|gb|EGG33089.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. HGF5]
          Length = 149

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 72/138 (52%), Gaps = 17/138 (12%)

Query: 13  SGLAVQSARMQIISENIANARTTG---DTPGSDPYRRKTI-------SFEEV----MHGS 58
           S L  Q  RM +IS NIANA TT    +   + PYRRKT+       SFE +    M+G 
Sbjct: 12  SALTAQRLRMDVISSNIANAETTRARIENGQAVPYRRKTVVFQPQQESFEGLLRAQMNGQ 71

Query: 59  G---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV+V ++  DQS   + ++P HP ANA G V  PNV++  E  DM    R Y AN+
Sbjct: 72  NAGQGVKVAQVREDQSPLKQVYNPTHPDANAEGYVFMPNVDITKEMVDMLAATRSYEANV 131

Query: 116 QTIKQSHDMMTTTLDLLR 133
             I  S  M+   L++ R
Sbjct: 132 TAINASKAMIMKALEIGR 149


>gi|153953776|ref|YP_001394541.1| flagellar basal body rod protein FlgC [Clostridium kluyveri DSM
           555]
 gi|219854392|ref|YP_002471514.1| hypothetical protein CKR_1049 [Clostridium kluyveri NBRC 12016]
 gi|146346657|gb|EDK33193.1| FlgC [Clostridium kluyveri DSM 555]
 gi|219568116|dbj|BAH06100.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 143

 Score = 80.5 bits (197), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 66/134 (49%), Gaps = 12/134 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----------- 57
            I+ SGL+ +  RM  I+ N+AN  TT    G +PYRRK   F+E +             
Sbjct: 9   RISASGLSAERLRMDTIASNMANVETTKGADG-NPYRRKIAVFQENLQKQLNKAGRYENV 67

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           S GV+   I  D S F   +DP +  A+A G V  PNVN+L E ADM    R Y ANL  
Sbjct: 68  SQGVKAVGIVEDNSEFKRVYDPTNADADADGYVSMPNVNILNEMADMMVAVRSYEANLSA 127

Query: 118 IKQSHDMMTTTLDL 131
           I     M +  LD+
Sbjct: 128 ISAEKSMFSKALDI 141


>gi|222053600|ref|YP_002535962.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
 gi|221562889|gb|ACM18861.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
          Length = 146

 Score = 80.5 bits (197), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 17/148 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SF 51
           MD+   S  I+ S L  +  RM +IS N+ANA +T    G  PY+RK            F
Sbjct: 1   MDFFT-SMDISASALTAERTRMNLISSNLANAGSTRTAEGG-PYKRKDAVFAAEPVVEPF 58

Query: 52  EEVMHGSGG-VRVKKIGV-----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
             ++  +GG +  K++GV     DQ+    ++DP HP A+A G V  PNVNV+ E ADM 
Sbjct: 59  SSILKKAGGSMEPKQVGVVQITEDQTPPRLQYDPTHPDADAKGYVALPNVNVVEEMADMI 118

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+   + +  M   TL+L R
Sbjct: 119 AATRTYEANVTAAQAAKSMALKTLELGR 146


>gi|148546704|ref|YP_001266806.1| flagellar basal body rod protein FlgC [Pseudomonas putida F1]
 gi|148510762|gb|ABQ77622.1| flagellar basal-body rod protein FlgC [Pseudomonas putida F1]
          Length = 147

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 69/139 (49%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK----TISFEEVMHGSG----- 59
           +IA SG++ Q+ R+  ++ NIANA T   +     YR +      +F+    GS      
Sbjct: 8   NIAGSGMSAQNTRLNTVASNIANAETVSSSI-DQTYRARHPVFATTFQNAQAGSSQSLFE 66

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+VK I  DQST    ++P HP AN  G V YPNVNV+ E ADM   +R + 
Sbjct: 67  DQGEAGQGVQVKGIVEDQSTLEARYEPNHPAANKDGYVYYPNVNVVEEMADMISASRAFQ 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N + +  +  MM   L L
Sbjct: 127 TNAELMNTAKSMMQKVLTL 145


>gi|225849147|ref|YP_002729311.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225643183|gb|ACN98233.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 137

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 7/131 (5%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG------VR 62
            ++ SG+  +  R+ + + N+AN  +T    G  PYRRK   FE V+           VR
Sbjct: 7   EVSVSGMQAERVRIDLSASNLANVNSTRAEDGQ-PYRRKVPVFEAVLDSQSKNTPIYKVR 65

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           VK+I  D S F  +FDP +P A+ +G V+ PNV+ + E  DM    R Y ANL       
Sbjct: 66  VKEIQTDPSPFKLKFDPNNPDADQNGYVRLPNVDPIREMVDMMSAMRSYEANLTAFNTHK 125

Query: 123 DMMTTTLDLLR 133
           DM+  +L+++R
Sbjct: 126 DMILKSLEIIR 136


>gi|39995516|ref|NP_951467.1| flagellar basal-body rod protein FlgC [Geobacter sulfurreducens
           PCA]
 gi|39982279|gb|AAR33740.1| flagellar basal-body rod protein FlgC [Geobacter sulfurreducens
           PCA]
 gi|298504516|gb|ADI83239.1| flagellar basal body rod protein FlgC [Geobacter sulfurreducens
           KN400]
          Length = 146

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 74/145 (51%), Gaps = 16/145 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           MD+  A   +++S L+ +  RM +IS N+ANA +T    G  PY+RK   F     G G 
Sbjct: 1   MDFFSA-MQVSSSALSAERTRMNLISANLANANSTRTAEGG-PYKRKDAVFAATQVGEGF 58

Query: 60  -------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV+V  I  D +    ++DP HP A+A G V  PNVNV+ E ADM  
Sbjct: 59  RSALDRMRKNAPQGVQVTGIVEDPNPPRLQYDPSHPDADAKGYVALPNVNVVEEMADMIA 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R Y AN+  ++ + +M   TL++
Sbjct: 119 ATRAYEANVTAMQAAKNMALKTLEI 143


>gi|325982373|ref|YP_004294775.1| flagellar basal-body rod protein FlgC [Nitrosomonas sp. AL212]
 gi|325531892|gb|ADZ26613.1| flagellar basal-body rod protein FlgC [Nitrosomonas sp. AL212]
          Length = 133

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 11/127 (8%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV---MHGSGGVRVKKI 66
           IA+S ++ QS R+ +++ N++NA +   + G +PYR + + F  +    +G+ GV+V  +
Sbjct: 8   IASSAMSAQSQRLNVVASNLSNADSVTSSTG-EPYRGRQVVFSTLRADANGAAGVKVAGV 66

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D S   + F+P HP AN SG V  PNVNV+ E  +M   +R Y       + S DMM 
Sbjct: 67  IHDPSPMRQVFEPNHPFANTSGYVTMPNVNVVDEMVNMMSASRSY-------QNSVDMMN 119

Query: 127 TTLDLLR 133
           TT  LL+
Sbjct: 120 TTKSLLQ 126


>gi|303248348|ref|ZP_07334609.1| flagellar basal-body rod protein FlgC [Desulfovibrio fructosovorans
           JJ]
 gi|302490256|gb|EFL50170.1| flagellar basal-body rod protein FlgC [Desulfovibrio fructosovorans
           JJ]
          Length = 146

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 14/144 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SFEEV 54
           L  +  I +SG++ Q   M  IS N+AN RTT    G  PY RK++          F E 
Sbjct: 3   LFTAMDIGSSGMSAQRTLMNTISMNLANIRTTRTVNGGGPYVRKSVMLESTPIDSPFSEA 62

Query: 55  MHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
           M  +      GV+V  +  D   F  +++PGHP ANA G V YP++NV+ E A+M    R
Sbjct: 63  MKTAQDRELAGVKVTGLVNDNRPFRMQYEPGHPDANAEGYVAYPDINVVEEMANMITAMR 122

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y A+  +I     M +  L++ R
Sbjct: 123 SYEASSSSIGTVKTMFSKALEIGR 146


>gi|294827625|ref|NP_710527.2| flagellar basal body rod protein FlgC [Leptospira interrogans
           serovar Lai str. 56601]
 gi|293385469|gb|AAN47545.2| flagellar basal body rod protein FlgC [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 153

 Score = 80.1 bits (196), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 74/150 (49%), Gaps = 20/150 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           L +S +I+ +GL+ Q  RM +IS NIAN+ TT +T G  P+RR  +              
Sbjct: 3   LFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTKWRSP 62

Query: 54  -----VMHGSG-GVRVKKIGVDQSTFVEEFDPGHP----VANASGIVKYPNVNVLVETAD 103
                V  G G GV+V K+  D +     +DP HP    +    G V+ PNVN++ E  D
Sbjct: 63  VYPFGVSPGEGKGVKVMKVEKDMTPLRLVYDPTHPDSIQIGPKKGYVEMPNVNIVTEMTD 122

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN+Q I  S  M    L++ R
Sbjct: 123 MISASRSYEANVQMINGSKAMFNKALEIGR 152


>gi|223040442|ref|ZP_03610716.1| flagellar basal-body rod protein FlgC [Campylobacter rectus RM3267]
 gi|222878292|gb|EEF13399.1| flagellar basal-body rod protein FlgC [Campylobacter rectus RM3267]
          Length = 165

 Score = 80.1 bits (196), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 33/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M   ++   I+  GL+ Q  RM +IS NIANA T     G  PYRR+ + F+ V   S  
Sbjct: 1   MSNYLSDFDISGYGLSAQRFRMNVISSNIANANTVRTAEGG-PYRRREVIFKAVDFDSVL 59

Query: 59  ------------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V KI  D   F  ++DP HP A+A G
Sbjct: 60  NDEVAKKHNLLEYENPLDDKSYTKDAKPAIMSVVVDKIVRDDKDFKLKYDPSHPDADARG 119

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N ++E AD+ E  R Y AN+   + +  +  + L+LL+
Sbjct: 120 YVAYPNINPVIEMADLIEATRAYQANVSAFQSAKTIAQSALELLQ 164


>gi|189426355|ref|YP_001953532.1| flagellar basal-body rod protein FlgC [Geobacter lovleyi SZ]
 gi|189422614|gb|ACD97012.1| flagellar basal-body rod protein FlgC [Geobacter lovleyi SZ]
          Length = 145

 Score = 80.1 bits (196), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 15/142 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SFEEV 54
           L  + + ++S L  +  RM +IS N+AN  TT  TP   PY+RK           +F + 
Sbjct: 3   LFTAMNTSSSALTAERTRMNLISSNLANVNTT-RTPEGGPYKRKDAVFAATAPVDAFGKA 61

Query: 55  MHGSGGVRVKKIGV-----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
           + G+    V+++ V     D+S    ++DP HP AN  G V  PNVNV+ E ADM    R
Sbjct: 62  LGGAADRHVREVNVVEIVEDKSAPRMQYDPAHPDANPQGYVALPNVNVVEEMADMITATR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
           +Y AN+ + + + +M   TL++
Sbjct: 122 VYEANVMSAQAAKNMALKTLEI 143


>gi|255321464|ref|ZP_05362622.1| flagellar basal-body rod protein FlgC [Campylobacter showae RM3277]
 gi|255301320|gb|EET80579.1| flagellar basal-body rod protein FlgC [Campylobacter showae RM3277]
          Length = 165

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 33/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M   ++   I+  GL+ Q  RM +IS NIANA T     G  PYRR+ + F+ V   S  
Sbjct: 1   MSNYLSDFDISGYGLSAQRFRMNVISSNIANANTVRTAEGG-PYRRREVIFKAVDFDSVL 59

Query: 59  ------------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V KI  D   F  ++DP HP A+A G
Sbjct: 60  NDEVAKKHNLLEYENPLDDKFYTKDAKPAIMSVVVDKIVRDDKDFKLKYDPSHPDADARG 119

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N ++E AD+ E  R Y AN+   + +  +  + L+LL+
Sbjct: 120 YVAYPNINPVIEMADLIEATRAYQANVSAFQSAKTIAQSALELLQ 164


>gi|154175290|ref|YP_001408541.1| flagellar basal body rod protein FlgC [Campylobacter curvus 525.92]
 gi|112803036|gb|EAU00380.1| flagellar basal-body rod protein FlgC [Campylobacter curvus 525.92]
          Length = 167

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 33/155 (21%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---------EVMHGSGG 60
           I+  GL+ Q  RM +IS NIANA+TT    G  PYRR+ + F+         E M  SGG
Sbjct: 9   ISGYGLSAQRFRMNVISSNIANAQTTRTAEGG-PYRRQEVIFKAFDFDKILNEEMKNSGG 67

Query: 61  VRVKKIGVDQST-----------------------FVEEFDPGHPVANASGIVKYPNVNV 97
           +   +  +D  +                       F+ ++DP HP ANA+G V +PN+N 
Sbjct: 68  LLEYENPLDDPSSPKNAHPSLMSVVVDKVVRDDKDFMLKYDPSHPDANANGYVAFPNINP 127

Query: 98  LVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++E AD+ E  R Y AN+   + +  +  + + LL
Sbjct: 128 VIEMADLVEATRAYQANVAAFQSAKMIAQSAITLL 162


>gi|328958286|ref|YP_004375672.1| flagellar basal body rod protein FlgC [Carnobacterium sp. 17-4]
 gi|328674610|gb|AEB30656.1| flagellar basal body rod protein FlgC [Carnobacterium sp. 17-4]
          Length = 145

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 12/140 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
           +  S  I  SGL+++  ++  IS NIAN  TT    G  PY +K + FEE        + 
Sbjct: 3   IFDSMQINASGLSLERLKLDTISTNIANVNTTRTEDGEGPYLKKEVVFEESFKQVETSLA 62

Query: 57  GSG-----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           G G     GV+  +I  +    V E++P HP AN  G V+ PNVN+  E  DM  T R Y
Sbjct: 63  GQGTEKSFGVKPTEIRENTEDIVMEYNPTHPDANEEGYVQMPNVNMADEMIDMMTTLRTY 122

Query: 112 MANLQTIKQSHDMMTTTLDL 131
            AN+  +  S +M+T  L +
Sbjct: 123 DANVTAMNASKEMLTKALQI 142


>gi|313683371|ref|YP_004061109.1| flagellar basal-body rod protein flgc [Sulfuricurvum kujiense DSM
           16994]
 gi|313156231|gb|ADR34909.1| flagellar basal-body rod protein FlgC [Sulfuricurvum kujiense DSM
           16994]
          Length = 164

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 33/163 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMH-- 56
            + S  I+  GL+ Q  R+  IS NIANA+TT    G  PYRR     K I F +V +  
Sbjct: 3   FLNSFDISGYGLSAQRVRVNTISANIANAQTTRTNEGG-PYRRQEVIFKAIDFNKVYNKA 61

Query: 57  ----------------GSGGVR---------VKKIGVDQSTFVEEFDPGHPVANASGIVK 91
                           G  G++         V KI  D      +FDP HP A+A+G V 
Sbjct: 62  LENETSALEYSDPLKEGLAGLKPNPAIMSVVVDKISRDDKAPKMKFDPSHPDADANGYVA 121

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           YPN+N +VE AD+ E  R Y AN+   + + +M  + + +L++
Sbjct: 122 YPNINPVVEMADLVEATRSYQANVAAFESAKNMAGSAISILQN 164


>gi|183220163|ref|YP_001838159.1| flagellar basal body rod protein FlgC [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189910283|ref|YP_001961838.1| flagellar basal body rod protein FlgC [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167774959|gb|ABZ93260.1| Endoflagellar proximal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778585|gb|ABZ96883.1| Flagellar basal-body rod protein FlgC [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 153

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 20/150 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           +  S +I+ +GL+ Q  RM +IS NIAN+ TT +T G  P+RR  +              
Sbjct: 3   MFDSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVILTPINLRTQWKSP 62

Query: 54  -----VMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                V  G G GV+V KI  D S     +DP HP A       G V+ PN+N++ E  D
Sbjct: 63  VYPFGVAPGEGKGVKVMKIEKDMSPLRLTYDPTHPDAIQTGPKKGYVELPNINIVTEMTD 122

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN+Q I  S  MM   +++ R
Sbjct: 123 MISASRSYEANVQLINGSKAMMNKAMEIGR 152


>gi|45656202|ref|YP_000288.1| flagellar basal body rod protein FlgC [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45599436|gb|AAS68925.1| flagellar basal-body rod protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 155

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 74/150 (49%), Gaps = 20/150 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           L +S +I+ +GL+ Q  RM +IS NIAN+ TT +T G  P+RR  +              
Sbjct: 5   LFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTKWRSP 64

Query: 54  -----VMHGSG-GVRVKKIGVDQSTFVEEFDPGHP----VANASGIVKYPNVNVLVETAD 103
                V  G G GV+V K+  D +     +DP HP    +    G V+ PNVN++ E  D
Sbjct: 65  VYPFGVSPGEGKGVKVMKVEKDMTPLRLVYDPTHPDSIQIGPKKGYVEMPNVNIVTEMTD 124

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN+Q I  S  M    L++ R
Sbjct: 125 MISASRSYEANVQMINGSKAMFNKALEIGR 154


>gi|86151838|ref|ZP_01070052.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|148925898|ref|ZP_01809585.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157414808|ref|YP_001482064.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205355383|ref|ZP_03222154.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|283954185|ref|ZP_06371710.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283955949|ref|ZP_06373439.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|315124050|ref|YP_004066054.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841467|gb|EAQ58715.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|145844884|gb|EDK21988.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157385772|gb|ABV52087.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205346617|gb|EDZ33249.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|283792609|gb|EFC31388.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283794464|gb|EFC33208.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 414]
 gi|284925790|gb|ADC28142.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315017772|gb|ADT65865.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315931721|gb|EFV10676.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 164

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            E++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|220932527|ref|YP_002509435.1| flagellar basal-body rod protein FlgC [Halothermothrix orenii H
           168]
 gi|219993837|gb|ACL70440.1| flagellar basal-body rod protein FlgC [Halothermothrix orenii H
           168]
          Length = 145

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 68/143 (47%), Gaps = 16/143 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           ++ S +I+ SGL  Q  RM II++NIAN  TT    G  PYRRK   F E    S     
Sbjct: 1   MLDSLNISASGLTAQRLRMDIIADNIANVNTTRTEDGG-PYRRKLPVFREREADSFARVF 59

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GV V  I  D S F   ++PGHP AN  G V  PNVN+  E  DM   +
Sbjct: 60  QSKLGKDTDRRGVEVVGIREDDSPFKMVYNPGHPDANEEGYVAMPNVNITTEMVDMISAS 119

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN+  +  + +M    L +
Sbjct: 120 RAYEANVTALNTAKNMALKALQI 142


>gi|85858815|ref|YP_461017.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
 gi|85721906|gb|ABC76849.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
          Length = 143

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 14/143 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           MD+L  S  I +SG A Q A+M +I+ N+AN  TT  TP   PY+RK   F         
Sbjct: 1   MDFL-TSFRICSSGFAAQRAKMDVIASNLANVSTTS-TPEGGPYKRKVAIFSSENVKQKF 58

Query: 52  ---EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              + +      V +K++  D  T  + +DP HP A+  G V  PNVNV++E  DM   +
Sbjct: 59  RFGDRLRDAIREVALKEVVEDGETVRKVYDPSHPDADQQGNVAMPNVNVMMEMTDMITAS 118

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y A +     + +M   TLD+
Sbjct: 119 RAYEACVTAFDATKNMALKTLDI 141


>gi|217059|dbj|BAA02862.1| FlgC [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|581758|emb|CAA36310.1| unnamed protein product [Salmonella enterica subsp. enterica
           serovar Typhimurium]
          Length = 134

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S LA QS R+ + + N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALAAQSKRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVDAAPGQATGGVKVAS 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VIESQAPEKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRTYQANIEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|57167572|ref|ZP_00366712.1| flagellar basal-body rod protein FlgC [Campylobacter coli RM2228]
 gi|305433078|ref|ZP_07402234.1| flagellar basal-body rod protein FlgC [Campylobacter coli JV20]
 gi|57020694|gb|EAL57358.1| flagellar basal-body rod protein FlgC [Campylobacter coli RM2228]
 gi|304443779|gb|EFM36436.1| flagellar basal-body rod protein FlgC [Campylobacter coli JV20]
          Length = 164

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            E++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAQG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|86153269|ref|ZP_01071473.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|121612733|ref|YP_001000227.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005182|ref|ZP_02270940.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|85842995|gb|EAQ60206.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|87250029|gb|EAQ72987.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 164

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            E++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NEQINKDNNFLKYENPLNDPSSPEEAKPPIQSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|15594638|ref|NP_212427.1| flagellar basal body rod protein FlgC [Borrelia burgdorferi B31]
 gi|195941353|ref|ZP_03086735.1| flagellar basal body rod protein FlgC [Borrelia burgdorferi 80a]
 gi|216264936|ref|ZP_03436928.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 156a]
 gi|218249308|ref|YP_002374816.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi ZS7]
 gi|221217671|ref|ZP_03589139.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 72a]
 gi|223888936|ref|ZP_03623527.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 64b]
 gi|224533191|ref|ZP_03673791.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           WI91-23]
 gi|224533682|ref|ZP_03674270.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           CA-11.2a]
 gi|225549042|ref|ZP_03770017.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 94a]
 gi|225550067|ref|ZP_03771027.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 118a]
 gi|226320594|ref|ZP_03796154.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 29805]
 gi|2494521|sp|Q57466|FLGC_BORBU RecName: Full=Flagellar basal-body rod protein flgC
 gi|1165277|gb|AAA85616.1| FlgC [Borrelia burgdorferi]
 gi|1196316|gb|AAB51408.1| flagellar basal body rod protein [Borrelia burgdorferi]
 gi|2688173|gb|AAC66655.1| flagellar basal-body rod protein (flgC) [Borrelia burgdorferi B31]
 gi|215981409|gb|EEC22216.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 156a]
 gi|218164496|gb|ACK74557.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi ZS7]
 gi|221192348|gb|EEE18567.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 72a]
 gi|223885752|gb|EEF56851.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 64b]
 gi|224511918|gb|EEF82319.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           WI91-23]
 gi|224512975|gb|EEF83338.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           CA-11.2a]
 gi|225369179|gb|EEG98632.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 118a]
 gi|225370268|gb|EEG99706.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 94a]
 gi|226234013|gb|EEH32734.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 29805]
 gi|312147876|gb|ADQ30535.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi JD1]
 gi|312149272|gb|ADQ29343.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi N40]
          Length = 152

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F            
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVNNPYWKGP 61

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETAD 103
              + + +G G GVRV  I  D+S    ++DP HP + +SG     V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|307720251|ref|YP_003891391.1| flagellar basal-body rod protein FlgC [Sulfurimonas autotrophica
           DSM 16294]
 gi|306978344|gb|ADN08379.1| flagellar basal-body rod protein FlgC [Sulfurimonas autotrophica
           DSM 16294]
          Length = 164

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 33/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVM 55
           M   + S  I+  GL+ Q  R+  IS NIANA+TT    G  PYRR     K I+F +V 
Sbjct: 1   MSNFLNSFDISGYGLSAQRVRVNTISSNIANAQTTRTDEGG-PYRRREVVFKAINFNDVY 59

Query: 56  HGSGG---------------------------VRVKKIGVDQSTFVEEFDPGHPVANASG 88
           + + G                           V V K+  D S  + +F+P +P A+A+G
Sbjct: 60  NKALGENTQSAKYEDPLNEGEFGKKVNPAIMSVVVDKVIRDDSKPLMKFEPNNPDADANG 119

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N +VE +D+ E  R Y AN+   + + DM  + + LL+
Sbjct: 120 YVAYPNINPVVEMSDLVEATRSYQANVAAFQSAKDMANSAISLLQ 164


>gi|167770222|ref|ZP_02442275.1| hypothetical protein ANACOL_01565 [Anaerotruncus colihominis DSM
           17241]
 gi|167667544|gb|EDS11674.1| hypothetical protein ANACOL_01565 [Anaerotruncus colihominis DSM
           17241]
          Length = 145

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE--------VM 55
            + S  I  S L  +  RM  I +NIAN+ TT  TP  +PYRRK + F+E        + 
Sbjct: 3   FMKSMDIVGSALTAERFRMDTILQNIANSNTTR-TPEGEPYRRKQVVFQERAIDFQSALA 61

Query: 56  HGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
             S     GGVRV ++   Q  F   +DP HP AN  G V YPNVN+  E  D+   +  
Sbjct: 62  DASNRIERGGVRVTEVVESQRDFTPVYDPSHPDANEDGYVMYPNVNLTEERVDLMAASNA 121

Query: 111 YMANLQTIKQSHDMMTTTLDL 131
           Y ANL  +     +    L++
Sbjct: 122 YDANLTALAVVKSLALKALEI 142


>gi|86149025|ref|ZP_01067257.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88596860|ref|ZP_01100096.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218562179|ref|YP_002343958.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85840383|gb|EAQ57640.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88190549|gb|EAQ94522.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112359885|emb|CAL34673.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315928561|gb|EFV07858.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 164

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            E++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTISQSAIDLLR 163


>gi|293605001|ref|ZP_06687397.1| flagellar basal-body rod protein FlgC [Achromobacter piechaudii
           ATCC 43553]
 gi|292816606|gb|EFF75691.1| flagellar basal-body rod protein FlgC [Achromobacter piechaudii
           ATCC 43553]
          Length = 139

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE------EVMHG 57
           L++   IA S L+ QS RM + + N+ANA +    P   PYR + + F+      + M  
Sbjct: 3   LLSIFDIAGSALSAQSQRMNVTASNLANADSVVG-PDGQPYRARQVVFQVNPAAGQAMGQ 61

Query: 58  S-GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GGVRV  +  D S   + +DP HP+A+A G +  PNV+ + ET +M   +R Y AN++
Sbjct: 62  EIGGVRVAGVIQDPSPLKQIYDPKHPLADAQGYISMPNVDPVAETVNMIAASRSYQANVE 121

Query: 117 TIKQSHDMMTTTLDL 131
            +  +  +M  TL +
Sbjct: 122 VLNTAKSLMQKTLTI 136


>gi|167585192|ref|ZP_02377580.1| flagellar basal-body rod protein FlgC [Burkholderia ubonensis Bu]
          Length = 141

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 12/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEE---------VMHGSG 59
           +A S L+ QS R+ + + NIANA + TG  P   PY+ K + F              G G
Sbjct: 10  VAGSALSAQSQRLNVTASNIANADSATG--PDGKPYKAKQVVFAADPQGRARTASGQGVG 67

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y AN++T+ 
Sbjct: 68  GVRVAKVIDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSYQANVETLN 127

Query: 120 QSHDMMTTTLDL 131
            +  +M  TL +
Sbjct: 128 TAKQLMLKTLTI 139


>gi|91776307|ref|YP_546063.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus
           KT]
 gi|91710294|gb|ABE50222.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus
           KT]
          Length = 135

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 5/127 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSG---GVRVK 64
           +I+ S ++ Q  R+ +++ N+ANA +   + G  PYR K I F  V ++  G   GV+V+
Sbjct: 8   NISGSAMSAQGQRLNVVASNLANADSVTSSNG-QPYRTKHIVFSAVPVNAKGDAQGVKVQ 66

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +I  DQ+    ++DP HP+A+A+G V  PNVNV  E  +M   +R Y  N++T+  +  M
Sbjct: 67  QIVEDQAPPQLKYDPKHPLADANGYVAMPNVNVTEEMVNMISASRSYQNNVETMNAAKSM 126

Query: 125 MTTTLDL 131
           +  TL +
Sbjct: 127 LLKTLTI 133


>gi|242278628|ref|YP_002990757.1| flagellar basal-body rod protein FlgC [Desulfovibrio salexigens DSM
           2638]
 gi|242121522|gb|ACS79218.1| flagellar basal-body rod protein FlgC [Desulfovibrio salexigens DSM
           2638]
          Length = 147

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 74/145 (51%), Gaps = 16/145 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---------F 51
           M++  A   I  SGL  Q   + ++S N+ANA+TT    G  PYRRK++S         F
Sbjct: 1   MNFFTA-LDIGASGLKAQREYLNVVSMNMANAKTTRTAEGG-PYRRKSVSMESSPVLSPF 58

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           E  M+        GV V+ I  D   F E ++P HP A+  GIV+YP++NV+ E  +M  
Sbjct: 59  ETAMNQQLNQQLRGVTVRGIVSDTRPFKEVYEPNHPDADKKGIVRYPDINVVEEMVNMIT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
            +R Y AN Q +  +  M    L +
Sbjct: 119 ISRSYEANAQAVDSAKRMFNRALRI 143


>gi|307747446|gb|ADN90716.1| Flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni M1]
          Length = 164

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            E++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAVDLLR 163


>gi|224531802|ref|ZP_03672434.1| flagellar basal-body rod protein FlgC [Borrelia valaisiana VS116]
 gi|224511267|gb|EEF81673.1| flagellar basal-body rod protein FlgC [Borrelia valaisiana VS116]
          Length = 152

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F            
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVNNPYWKGP 61

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHP----VANASGIVKYPNVNVLVETAD 103
              + + +G G GVRV  I  D+S    ++DP HP      +  G V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISFGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|219684534|ref|ZP_03539477.1| flagellar basal-body rod protein FlgC [Borrelia garinii PBr]
 gi|219685765|ref|ZP_03540576.1| flagellar basal-body rod protein FlgC [Borrelia garinii Far04]
 gi|219671896|gb|EED28950.1| flagellar basal-body rod protein FlgC [Borrelia garinii PBr]
 gi|219672704|gb|EED29732.1| flagellar basal-body rod protein FlgC [Borrelia garinii Far04]
          Length = 152

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F            
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVSNPYWKGP 61

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHP----VANASGIVKYPNVNVLVETAD 103
              + + +G G GVRV  I  D+S    ++DP HP      +  G V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISFGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|16760051|ref|NP_455668.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764531|ref|NP_460146.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142178|ref|NP_805520.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56413838|ref|YP_150913.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179692|ref|YP_216109.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161614602|ref|YP_001588567.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553037|ref|ZP_02346787.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167994039|ref|ZP_02575131.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234101|ref|ZP_02659159.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168237257|ref|ZP_02662315.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244774|ref|ZP_02669706.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264032|ref|ZP_02686005.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467127|ref|ZP_02700969.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168822618|ref|ZP_02834618.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194446237|ref|YP_002040429.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194448226|ref|YP_002045174.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194469652|ref|ZP_03075636.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194737972|ref|YP_002114174.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197250491|ref|YP_002146868.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264065|ref|ZP_03164139.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197362761|ref|YP_002142398.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198244048|ref|YP_002215962.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200389763|ref|ZP_03216374.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204930701|ref|ZP_03221574.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205353087|ref|YP_002226888.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857317|ref|YP_002243968.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213161846|ref|ZP_03347556.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213419883|ref|ZP_03352949.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
 gi|213424678|ref|ZP_03357443.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582035|ref|ZP_03363861.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213615928|ref|ZP_03371754.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648924|ref|ZP_03378977.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865507|ref|ZP_03387626.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224584321|ref|YP_002638119.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911005|ref|ZP_04654842.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289828582|ref|ZP_06546407.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|60392283|sp|P0A1I7|FLGC_SALTY RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|60392284|sp|P0A1I8|FLGC_SALTI RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|25298909|pir||AH0639 probable flagellar basal-body rod protein FlgC (proximal rod
           protein) STY1214 [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16419692|gb|AAL20105.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502345|emb|CAD08299.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29137808|gb|AAO69369.1| putative flagellar basal-body rod protein FlgC [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|56128095|gb|AAV77601.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62127325|gb|AAX65028.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161363966|gb|ABX67734.1| hypothetical protein SPAB_02352 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404900|gb|ACF65122.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194406530|gb|ACF66749.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194456016|gb|EDX44855.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194713474|gb|ACF92695.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630453|gb|EDX49079.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197094238|emb|CAR59743.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197214194|gb|ACH51591.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197242320|gb|EDY24940.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289825|gb|EDY29186.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197938564|gb|ACH75897.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199602208|gb|EDZ00754.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204320160|gb|EDZ05364.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205272868|emb|CAR37797.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205322443|gb|EDZ10282.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328049|gb|EDZ14813.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331940|gb|EDZ18704.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336413|gb|EDZ23177.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205341032|gb|EDZ27796.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347372|gb|EDZ34003.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709120|emb|CAR33453.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224468848|gb|ACN46678.1| flagellar basal body rod protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261246386|emb|CBG24195.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992949|gb|ACY87834.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157716|emb|CBW17208.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312912162|dbj|BAJ36136.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320086385|emb|CBY96158.1| Flagellar basal-body rod protein flgC [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321223793|gb|EFX48856.1| Flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616545|gb|EFY13454.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620514|gb|EFY17378.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622508|gb|EFY19353.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629659|gb|EFY26434.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632621|gb|EFY29367.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636884|gb|EFY33587.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641578|gb|EFY38216.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644068|gb|EFY40614.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322653957|gb|EFY50280.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658489|gb|EFY54751.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663347|gb|EFY59549.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670081|gb|EFY66221.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674855|gb|EFY70946.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676675|gb|EFY72742.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682597|gb|EFY78616.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686650|gb|EFY82629.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322714162|gb|EFZ05733.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129445|gb|ADX16875.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195764|gb|EFZ80940.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198344|gb|EFZ83448.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203172|gb|EFZ88202.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209175|gb|EFZ94112.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209679|gb|EFZ94608.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217865|gb|EGA02580.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222153|gb|EGA06537.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224925|gb|EGA09183.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229667|gb|EGA13790.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232892|gb|EGA16988.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240627|gb|EGA24669.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242941|gb|EGA26962.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250258|gb|EGA34147.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252633|gb|EGA36471.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258839|gb|EGA42492.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261028|gb|EGA44621.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266937|gb|EGA50422.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269978|gb|EGA53427.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326623710|gb|EGE30055.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326628167|gb|EGE34510.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332988066|gb|AEF07049.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 134

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S LA QS R+ + + N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALAAQSKRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVDAAPGQATGGVKVAS 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VIESQAPEKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANIEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|304438470|ref|ZP_07398410.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368553|gb|EFM22238.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 151

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 68/139 (48%), Gaps = 19/139 (13%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--EVMHGSG--------- 59
           A SGL  +  RM +IS NIANA TT  T G   Y R+ + F+  E  HG G         
Sbjct: 10  AASGLTAERLRMDVISNNIANANTT-RTQGGGAYHRRYVVFQPREKGHGIGFESFLARAS 68

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GVR   I  D +     ++PGHP ANA G V+ PNVN++ E  DM   +R Y 
Sbjct: 69  NRMRPGDGVRAVGIRTDNTQGPLVYEPGHPDANADGYVERPNVNIVAEMVDMISASRGYE 128

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN  TI  +  M+   L +
Sbjct: 129 ANTTTINAAKSMVNAALRI 147


>gi|218887374|ref|YP_002436695.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758328|gb|ACL09227.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 145

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 71/147 (48%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SF 51
           MD++ A   I  S L  +   M IIS N+AN +TT    G  PYRRKT           F
Sbjct: 1   MDFMTA-IDIGASALNAERTNMNIISMNLANVKTTRTEQGG-PYRRKTTIMAAQDIDDPF 58

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            + M G+      GVRV  +  D       ++PGHP A+  G V YP++NV+ E A +  
Sbjct: 59  AKHMQGALDRELKGVRVMHVATDSRPLKRVYEPGHPDADQDGFVAYPDINVVEEMASLMT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+ TI     M T  L++ R
Sbjct: 119 AQRGYEANVTTIDTVKAMYTKALEISR 145


>gi|157165285|ref|YP_001467064.1| flagellar basal body rod protein FlgC [Campylobacter concisus
           13826]
 gi|112800440|gb|EAT97784.1| flagellar basal-body rod protein FlgC [Campylobacter concisus
           13826]
          Length = 166

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 33/155 (21%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----------- 58
           I+  GL+ Q  RM +IS NIANA+TT    G  PYRR+ + F+E+               
Sbjct: 9   ISGYGLSAQRFRMNVISSNIANAQTTRTAEGG-PYRRQEVIFKEMNFDKILNDQLKNSQS 67

Query: 59  ---------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNV 97
                                  V V K+  D   F  ++DP HP ANA+G V +PN+N 
Sbjct: 68  LLDYENPLDDPSSPKNAHPALTSVIVDKVVRDDKDFQLKYDPSHPDANANGYVAFPNINP 127

Query: 98  LVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++E AD+ E  R Y AN+ + + +  +  + + L+
Sbjct: 128 VIEMADLLEATRAYQANVASFQNAKTIAQSAISLI 162


>gi|118581824|ref|YP_903074.1| flagellar basal-body rod protein FlgC [Pelobacter propionicus DSM
           2379]
 gi|118504534|gb|ABL01017.1| flagellar basal-body rod protein FlgC [Pelobacter propionicus DSM
           2379]
          Length = 145

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 16/145 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SF 51
           MD+  A  +++ S L+ +  RM +IS N+ANA  T  TP   PY+RK            F
Sbjct: 1   MDFFSA-MNVSASALSAERTRMNLISSNLANANAT-RTPEGGPYKRKDAVFAATPVEGRF 58

Query: 52  EEVMHGSGGVRVKKIGV-----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
              + G+    ++++ V     DQS    ++DP HP AN  G V  PNVNV+ E ADM  
Sbjct: 59  ARALDGAANREIRQVEVQQVVEDQSPPRIQYDPSHPDANPQGYVAMPNVNVIEEMADMIG 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
            +R Y AN+  ++ +  M    L++
Sbjct: 119 ASRTYEANVTAVQTAKSMALKALEI 143


>gi|163939550|ref|YP_001644434.1| flagellar basal body rod protein FlgC [Bacillus weihenstephanensis
           KBAB4]
 gi|229132557|ref|ZP_04261406.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST196]
 gi|163861747|gb|ABY42806.1| flagellar basal-body rod protein FlgC [Bacillus weihenstephanensis
           KBAB4]
 gi|228650903|gb|EEL06889.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST196]
          Length = 137

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHG--SGGVRVK 64
           SGL      M++ S NI NA TTG  PG++PY R+++      SF  ++ G  + GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTG-APGAEPYHRRSVVLESNNSFASMLDGAPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIETDRNENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|239909138|ref|YP_002955880.1| flagellar basal-body rod protein FlgC [Desulfovibrio magneticus
           RS-1]
 gi|239799005|dbj|BAH77994.1| flagellar basal-body rod protein FlgC [Desulfovibrio magneticus
           RS-1]
          Length = 147

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 14/144 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SFEEV 54
           L  +  I +SG++ Q   M  IS N+AN +TT    G  PY RK++          F + 
Sbjct: 3   LFTAMDIGSSGMSAQRTTMNTISMNLANIKTTRTVNGGGPYVRKSVMLESTPVDSPFSKA 62

Query: 55  MHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
           M  +      GV+V  +  D   F  +++PGHP ANA G V YP++NV+ E A+M    R
Sbjct: 63  MQSAQDRDLAGVKVTSLVNDNRPFRMQYEPGHPDANADGYVAYPDINVVEEMANMITAMR 122

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y A+  +I    +M    L++ R
Sbjct: 123 SYEASSSSIGTVKNMFNKALEIGR 146


>gi|269792948|ref|YP_003317852.1| flagellar basal-body rod protein FlgC [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100583|gb|ACZ19570.1| flagellar basal-body rod protein FlgC [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 139

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 65/134 (48%), Gaps = 8/134 (5%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SG 59
           S  +A S L      M  IS N+AN  TT  TP   PY R+   F+E +         S 
Sbjct: 6   SVDVAGSALTAHRVWMDAISSNLANVNTT-RTPEGGPYVRRVPIFQERLMAAMKDGSTSS 64

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  I  D       + P HP AN  G V YPNVNV+ E ADM   +R Y ANL  ++
Sbjct: 65  GVKVVAIERDPLPPRMVYQPDHPDANQEGYVAYPNVNVVREMADMMVASRAYEANLTVVE 124

Query: 120 QSHDMMTTTLDLLR 133
               M  + +D++R
Sbjct: 125 TGKAMWNSAIDIMR 138


>gi|15596275|ref|NP_249769.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PAO1]
 gi|107100523|ref|ZP_01364441.1| hypothetical protein PaerPA_01001548 [Pseudomonas aeruginosa PACS2]
 gi|116049007|ref|YP_792191.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|152984084|ref|YP_001349652.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PA7]
 gi|218892958|ref|YP_002441827.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa
           LESB58]
 gi|254234214|ref|ZP_04927537.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           C3719]
 gi|254239436|ref|ZP_04932758.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 2192]
 gi|296390558|ref|ZP_06880033.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PAb1]
 gi|313106033|ref|ZP_07792292.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           39016]
 gi|9946994|gb|AAG04467.1|AE004539_9 flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa PAO1]
 gi|115584228|gb|ABJ10243.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166145|gb|EAZ51656.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           C3719]
 gi|126192814|gb|EAZ56877.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 2192]
 gi|150959242|gb|ABR81267.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa PA7]
 gi|218773186|emb|CAW28998.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           LESB58]
 gi|310878794|gb|EFQ37388.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           39016]
          Length = 146

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 16/138 (11%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK----TISFEEVMHGSG----- 59
           +IA SG++ QS R+  ++ NIANA T   +     YR +    +  F++    SG     
Sbjct: 8   NIAGSGMSAQSTRLNTVASNIANAETVSSSV-DKTYRARHPVFSTMFQQAQGDSGSLFAD 66

Query: 60  ------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                 GV+V  I  DQS+ +  ++P HP A+A+G V YPNVNV+ E ADM   +R +  
Sbjct: 67  QDSSGAGVQVLGIVEDQSSLMPRYEPNHPAADANGYVYYPNVNVVEEMADMISASRAFQT 126

Query: 114 NLQTIKQSHDMMTTTLDL 131
           N + +  +  MM   L L
Sbjct: 127 NAEMMNTAKQMMQKVLTL 144


>gi|168187558|ref|ZP_02622193.1| flagellar basal-body rod protein FlgC [Clostridium botulinum C str.
           Eklund]
 gi|169294598|gb|EDS76731.1| flagellar basal-body rod protein FlgC [Clostridium botulinum C str.
           Eklund]
          Length = 145

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 13/142 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPG-SDPYRRKTISFEEVMH------G 57
            +S  I+ SGL+ +  RM  I  NI N +TT    G   PYRRK   F+E  +      G
Sbjct: 4   FSSMRISASGLSAERLRMDTIFSNITNFKTTRGKDGQKQPYRRKIAVFQENFNKELNKSG 63

Query: 58  SG------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           +G      GV+   I  D+S     ++P HP A+ +G V  PNVN+L E ADM    R Y
Sbjct: 64  NGYESRLNGVKAVGIVEDKSQLRRVYNPNHPDADENGYVLMPNVNILNEMADMIAATRAY 123

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I  S +M    L++ R
Sbjct: 124 EANVTAINSSKNMFMKALEIGR 145


>gi|237751239|ref|ZP_04581719.1| flagellar basal body rod protein FlgC [Helicobacter bilis ATCC
           43879]
 gi|229372605|gb|EEO22996.1| flagellar basal body rod protein FlgC [Helicobacter bilis ATCC
           43879]
          Length = 163

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 33/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
            +++  I+  GL+ Q  R+ +IS NIANA TT    G  PYRR+ + F            
Sbjct: 2   FMSTFDISGYGLSAQRVRVNVISANIANANTTRTDEGG-PYRRQEVVFRAFDFNKQLNKR 60

Query: 52  --------------EEVMHGSG------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
                         EE  +G         V + KI  D +  + ++DP HP ANA G V 
Sbjct: 61  LAKDNNLVEYKDPLEEGAYGKKPVPPITSVYIDKIVRDDNKPLMKYDPTHPDANAQGYVA 120

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           YPNVN +VE AD+ E  R Y AN+   + + +M +  + + +
Sbjct: 121 YPNVNPVVEMADLVEATRAYQANVAAFQSAKNMASNAITMFQ 162


>gi|332297607|ref|YP_004439529.1| flagellar basal-body rod protein FlgC [Treponema brennaborense DSM
           12168]
 gi|332180710|gb|AEE16398.1| flagellar basal-body rod protein FlgC [Treponema brennaborense DSM
           12168]
          Length = 151

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
           L  S +IA +G++V+  R  +IS+NIANA TT  TP    ++RK++    +         
Sbjct: 3   LFTSINIAATGMSVERLRTDVISDNIANASTT-RTPEGGKFQRKSVVLTPIAENPTFRNP 61

Query: 56  -------HGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETAD 103
                  +G G GVR+ KI  D +     +DP HP A  SG     V+YPNVN++ E  D
Sbjct: 62  FVPADIDNGPGAGVRISKIVKDTAQGRMVYDPSHPDAIQSGPNAGYVEYPNVNIVNEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y AN   I+ S DM ++ L++ R
Sbjct: 122 LISASRAYEANSSVIQGSKDMFSSALEIAR 151


>gi|118474843|ref|YP_891880.1| flagellar basal body rod protein FlgC [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414069|gb|ABK82489.1| flagellar basal-body rod protein FlgC [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 164

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVM 55
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR     K I F++ +
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKAIEFDKEL 58

Query: 56  HGS---------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           + S                             V V KI  D   F  ++DP HP A+A G
Sbjct: 59  NKSINSKNDFLKNENPLNDPDAPEFPKPALMSVVVDKIVRDDKDFKLKYDPTHPDADAKG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  PN+N ++E AD+ E  R Y AN+   + +  + T+ ++LL+
Sbjct: 119 YIMLPNINPVIEMADLIEATRAYQANVSAFQSAKSIATSAIELLK 163


>gi|304397202|ref|ZP_07379081.1| flagellar basal-body rod protein FlgC [Pantoea sp. aB]
 gi|304355351|gb|EFM19719.1| flagellar basal-body rod protein FlgC [Pantoea sp. aB]
          Length = 134

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKK 65
           IA S +  QS R+ + + N+ANA + TG  P   PY  K + F+ +   GS  GGV+V K
Sbjct: 9   IAGSAMTAQSQRLNVSASNLANADSVTG--PDGKPYVAKQVVFQTDAAPGSATGGVKVAK 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  D +     +DPG+P+A+A G VK PNV+V+ E+ +    +R Y AN++ +     MM
Sbjct: 67  IVDDPTPAKLVYDPGNPMADAKGYVKMPNVDVVSESVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 MKTLTL 132


>gi|216264021|ref|ZP_03436015.1| flagellar basal-body rod protein FlgC [Borrelia afzelii ACA-1]
 gi|215980065|gb|EEC20887.1| flagellar basal-body rod protein FlgC [Borrelia afzelii ACA-1]
          Length = 152

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F            
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVNNPYWKGP 61

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETAD 103
              + + +G G GVRV  I  D+S    ++DP HP + +SG     V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|111115118|ref|YP_709736.1| flagellar basal body rod protein FlgC [Borrelia afzelii PKo]
 gi|110890392|gb|ABH01560.1| flagellar basal-body rod protein [Borrelia afzelii PKo]
          Length = 152

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F            
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVNNPYWKGP 61

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETAD 103
              + + +G G GVRV  I  D+S    ++DP HP + +SG     V+ PNVN++ E  D
Sbjct: 62  FVPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|220904841|ref|YP_002480153.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869140|gb|ACL49475.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 145

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 16/145 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SF 51
           MD++ A   I+ SGLA    R+  IS N+ANA+TT  TP   PYRR+++          F
Sbjct: 1   MDFMTAF-DISASGLAADRTRINTISMNLANAKTT-RTPLGGPYRRRSVVQQTADVDDPF 58

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
              M  +      GVRV  + +D   F   ++PG+P ANA G V YP++NV+ E A++  
Sbjct: 59  SVHMRSALDRAVKGVRVMAVTMDNRPFKRVYEPGNPDANAEGYVMYPDINVVEEMANLMT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R + AN+ T+     M    L++
Sbjct: 119 AQRNFEANVTTVDAIKGMYVKALEI 143


>gi|57238273|ref|YP_178646.1| flagellar basal body rod protein FlgC [Campylobacter jejuni RM1221]
 gi|57167077|gb|AAW35856.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni RM1221]
 gi|315057945|gb|ADT72274.1| Flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 164

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            E +   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NERINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|224534284|ref|ZP_03674862.1| flagellar basal-body rod protein FlgC [Borrelia spielmanii A14S]
 gi|224514386|gb|EEF84702.1| flagellar basal-body rod protein FlgC [Borrelia spielmanii A14S]
          Length = 152

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F            
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRINNPYWKGP 61

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETAD 103
              + + +G G GVRV  I  D+S    ++DP HP + +SG     V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|298530645|ref|ZP_07018047.1| flagellar basal-body rod protein FlgC [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510019|gb|EFI33923.1| flagellar basal-body rod protein FlgC [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 146

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 15/144 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----------- 52
            + S  I  S L+ +   + +IS N+ANA TT  TP   PY RK++ F            
Sbjct: 3   FMKSLDIGASALSAERTHLNVISMNLANANTT-RTPEGGPYERKSVLFRSTPLETPFGHA 61

Query: 53  ---EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
              E+     GV+ +K+  DQ  F   +DP HP A+  G VK P++NV+ E A+M    R
Sbjct: 62  MQTELERELRGVKAQKVMTDQRPFKMVYDPAHPDADQEGYVKTPDINVVEEMANMLTAMR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +  + +M    L++ R
Sbjct: 122 TYEANVSAVTNTKNMFNKALEIGR 145


>gi|300722684|ref|YP_003711974.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629191|emb|CBJ89787.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus nematophila ATCC 19061]
          Length = 134

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L++   IA+S L+ QS R+ + + N+ANA +    P  +PYR K + F          GG
Sbjct: 3   LLSIFDIASSALSAQSQRLNVSASNMANADSVVG-PDGEPYRAKQVVFRVAAPAGQEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D + F  E+ PG+P+A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVSEVVDDPTPFRLEYKPGNPLADEKGYVRMPNVDVVGEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDL 131
           +  +M  TL L
Sbjct: 122 TKSIMLKTLTL 132


>gi|255523706|ref|ZP_05390672.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
 gi|296186710|ref|ZP_06855112.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
 gi|255512575|gb|EET88849.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
 gi|296048747|gb|EFG88179.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
          Length = 144

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 69/137 (50%), Gaps = 13/137 (9%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----------HGS 58
            I+ SGL+ +  RM  I+ NIAN  TT    G  PYRRK   F+E +          +  
Sbjct: 9   RISASGLSAERLRMDTIASNIANVDTTRGANGQ-PYRRKIAVFQENLNTQLNKQNGKYEQ 67

Query: 59  GGVRVKKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             + VK +G+  D+S     +DP +P A+A G V  PNVNVL E ADM    R Y AN+ 
Sbjct: 68  TPLGVKAVGIVDDESPLRRVYDPSNPDADAQGYVSKPNVNVLNEMADMMVATRAYEANID 127

Query: 117 TIKQSHDMMTTTLDLLR 133
            I     M +  L++ R
Sbjct: 128 AISSEKTMFSKALEIGR 144


>gi|107023955|ref|YP_622282.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia AU
           1054]
 gi|116691042|ref|YP_836665.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
           HI2424]
 gi|170734376|ref|YP_001766323.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
 gi|206558966|ref|YP_002229726.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
           J2315]
 gi|105894144|gb|ABF77309.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia AU
           1054]
 gi|116649131|gb|ABK09772.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           HI2424]
 gi|169817618|gb|ACA92201.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
 gi|198035003|emb|CAR50875.1| flagellar basal-body rod protein FlgC (putative proximal rod
           protein) [Burkholderia cenocepacia J2315]
          Length = 141

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 12/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--------G 59
           +A S L+ QS R+ + + N+ANA + TG  P   PY+ K + F  + M G+        G
Sbjct: 10  VAGSALSAQSQRLNVTASNLANADSATG--PDGKPYKAKQVVFATDPMGGARTASGQGVG 67

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y AN++T+ 
Sbjct: 68  GVRVTKVMDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSYQANVETLN 127

Query: 120 QSHDMMTTTLDL 131
            +  +M  TL +
Sbjct: 128 TAKTLMLKTLTI 139


>gi|104782845|ref|YP_609343.1| flagellar basal body rod protein FlgC [Pseudomonas entomophila L48]
 gi|95111832|emb|CAK16556.1| flagellar cell-proximal portion of basal-body rod FlgC [Pseudomonas
           entomophila L48]
          Length = 147

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK----TISFEEVMHGSG----- 59
           +IA SG++ Q+ R+  ++ NIANA T   +     YR +      +F++   G G     
Sbjct: 8   NIAGSGMSAQNTRLNTVASNIANAETVSSSL-DQTYRARHPVFATTFQQAQGGVGQSLFE 66

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+VK I  DQS     ++P HP AN  G V YPNVNV+ E ADM   +R + 
Sbjct: 67  DQGEAGQGVQVKGIIEDQSNLEARYEPNHPAANKDGYVYYPNVNVVEEMADMISASRAFQ 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N + +  +  MM   L L
Sbjct: 127 TNAELMNTAKTMMQKVLTL 145


>gi|226327748|ref|ZP_03803266.1| hypothetical protein PROPEN_01621 [Proteus penneri ATCC 35198]
 gi|225203452|gb|EEG85806.1| hypothetical protein PROPEN_01621 [Proteus penneri ATCC 35198]
          Length = 134

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L +   I+ S L+ QS R+ + + N+ANA +    P  +PYR K + F+         GG
Sbjct: 3   LFSIFDISGSALSAQSQRLNVSASNMANADSVAG-PDGEPYRAKQVVFQVNAPAGQEVGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D + F  E+ PGHP A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVTEVVDDPAPFRMEYQPGHPFADEKGYVRMPNVDVVGEMINTISASRSYQANVEVMNT 121

Query: 121 SHDMMTTTL 129
           +  +M  TL
Sbjct: 122 AKSLMQKTL 130


>gi|325529011|gb|EGD06024.1| flagellar basal body rod protein FlgC [Burkholderia sp. TJI49]
          Length = 141

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 12/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---------EVMHGSG 59
           +A S L+ QS R+ + + N+ANA + TG  P   PY+ K + F              G G
Sbjct: 10  VAGSALSAQSQRLNVTASNLANADSATG--PDGKPYKAKQVVFATDPIGGARTASGQGVG 67

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y AN++T+ 
Sbjct: 68  GVRVTKVVDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSYQANVETLN 127

Query: 120 QSHDMMTTTLDL 131
            +  +M  TL +
Sbjct: 128 TAKQLMLKTLTI 139


>gi|330502732|ref|YP_004379601.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
 gi|328917018|gb|AEB57849.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
          Length = 147

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-GSGGVR----- 62
           +IA +G++ QS R+  IS NIANA T   +     YR +   F  V     GG R     
Sbjct: 8   NIAGTGMSAQSTRLNTISSNIANAETVSSSL-DQTYRARHPVFATVFQQAQGGDRGSLFA 66

Query: 63  --------VKKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                   V+ +GV  DQS+ +  ++P HP+ANA G V YPNVNV+ E ADM   +R + 
Sbjct: 67  EQDEAGRGVQVLGVIEDQSSLMPRYEPDHPMANADGYVYYPNVNVVEEMADMISASRAFQ 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N++ +  +  M+   L L
Sbjct: 127 TNVEMMNTAKQMLQRVLTL 145


>gi|290474970|ref|YP_003467854.1| flagellar basal body rod cell-proximal protein [Xenorhabdus
           bovienii SS-2004]
 gi|289174287|emb|CBJ81077.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus bovienii SS-2004]
          Length = 134

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L++   IA+S L+ QS R+ + + N+ANA +    P  +PYR K + F          GG
Sbjct: 3   LLSIFDIASSALSAQSQRLNVSASNMANADSVVG-PDGEPYRAKQVVFRVAAPAGQEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D + F  E+ PG+P+A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVSEVVDDPTPFRLEYRPGNPLADEKGYVRMPNVDVVGEMVNTISASRSYQANIEVLNT 121

Query: 121 SHDMMTTTLDL 131
           +  +M  TL L
Sbjct: 122 TKSIMLKTLTL 132


>gi|229058378|ref|ZP_04196762.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH603]
 gi|228719887|gb|EEL71477.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH603]
          Length = 137

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHG--SGGVRVK 64
           SGL      M++ S NI NA TTG  PG++PY R+++      +F  ++ G  + GV+VK
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTG-APGAEPYHRRSVVLESNNNFASMLDGAPTNGVKVK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIETDRNENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|167034946|ref|YP_001670177.1| flagellar basal body rod protein FlgC [Pseudomonas putida GB-1]
 gi|166861434|gb|ABY99841.1| flagellar basal-body rod protein FlgC [Pseudomonas putida GB-1]
          Length = 147

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK----TISFEEVMHGSG----- 59
           +IA SG++ Q+ R+  ++ NIANA T   +     YR +      +F+    G       
Sbjct: 8   NIAGSGMSAQNTRLNTVASNIANAETVSSSI-DQTYRARHPVFATTFQNAQAGGSQSLFE 66

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+VK I  DQST    ++P HP AN  G V YPNVNV+ E ADM   +R + 
Sbjct: 67  DQGEAGQGVQVKGIVEDQSTLEARYEPNHPAANKDGYVYYPNVNVVEEMADMISASRAFQ 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N + +  +  MM   L L
Sbjct: 127 TNAELMNTAKSMMQKVLTL 145


>gi|295111496|emb|CBL28246.1| flagellar basal-body rod protein FlgC [Synergistetes bacterium
           SGP1]
          Length = 139

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 8/134 (5%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------G 59
           S  +A S L      M  IS N+AN  TT    G  PY+R+   F E++  +       G
Sbjct: 6   SMEVAGSALTAHRLWMDTISSNLANINTTRTLSGG-PYKRRVPVFAEMLDRTIGGYRDIG 64

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  I  D++     + P HP A+  G V YPNVN++ E  DM   +R Y ANL  + 
Sbjct: 65  GVRVTAITEDRTAPRMTYQPDHPDADKDGYVAYPNVNLVREMTDMLVASRAYEANLSVVT 124

Query: 120 QSHDMMTTTLDLLR 133
            + +M    L+++R
Sbjct: 125 TAREMWNGALEVMR 138


>gi|146307871|ref|YP_001188336.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina ymp]
 gi|145576072|gb|ABP85604.1| flagellar basal-body rod protein FlgC [Pseudomonas mendocina ymp]
          Length = 147

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-GSGGVR----- 62
           +IA +G++ QS R+  IS NIANA T   +     YR +   F  V     GG R     
Sbjct: 8   NIAGTGMSAQSTRLNTISSNIANAETVSSSI-DQTYRARHPVFATVFQQAQGGDRGSLFA 66

Query: 63  --------VKKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                   V+ +GV  DQS+ +  ++P HP+ANA G V YPNVNV+ E ADM   +R + 
Sbjct: 67  EQDEAGRGVQVLGVVEDQSSLMPRYEPDHPMANADGYVYYPNVNVVEEMADMISASRAFQ 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N++ +  +  M+   L L
Sbjct: 127 TNVEMMNTAKQMLQRVLTL 145


>gi|254246963|ref|ZP_04940284.1| Flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           PC184]
 gi|124871739|gb|EAY63455.1| Flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           PC184]
          Length = 141

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 12/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---------EVMHGSG 59
           +A S L+ QS R+ + + N+ANA + TG  P   PY+ K + F              G G
Sbjct: 10  VAGSALSAQSQRLNVTASNLANADSATG--PDGKPYKAKQVVFATDPLGGARTASGQGVG 67

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y AN++T+ 
Sbjct: 68  GVRVTKVMDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSYQANVETLN 127

Query: 120 QSHDMMTTTLDL 131
            +  +M  TL +
Sbjct: 128 TAKTLMLKTLTI 139


>gi|160880851|ref|YP_001559819.1| flagellar basal-body rod protein FlgC [Clostridium phytofermentans
           ISDg]
 gi|160429517|gb|ABX43080.1| flagellar basal-body rod protein FlgC [Clostridium phytofermentans
           ISDg]
          Length = 150

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 20/142 (14%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---------- 58
           +I+ SG++ Q  RM IIS+NIAN  TT D  G +PYRRKT+ F E   GS          
Sbjct: 8   NISASGMSAQRLRMDIISQNIANVETTRDENG-NPYRRKTVVFSERESGSFGTVLAQKAA 66

Query: 59  --------GGVRVKKIGVDQSTFVEE-FDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                    GV+V  I  D  T ++  ++P HP A+  G V  PNVN + E  ++    R
Sbjct: 67  SKASDTQGNGVKVTAIVEDHVTAMKRVYNPSHPDADQDGYVTMPNVNTVTEMTNLISATR 126

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            Y AN+     + +M+   L++
Sbjct: 127 SYEANVTAFNATKNMLLKGLEV 148


>gi|77918798|ref|YP_356613.1| flagellar basal-body rod protein FlgC [Pelobacter carbinolicus DSM
           2380]
 gi|77544881|gb|ABA88443.1| flagellar basal-body rod protein FlgC [Pelobacter carbinolicus DSM
           2380]
          Length = 143

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 13/142 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           +  +  ++ S L+ Q  R+ +IS N+AN  TT  TP   PYR++ + F+   +       
Sbjct: 3   IFTAMQVSASALSAQRTRLNVISGNLANVGTT-RTPEGGPYRKRDVVFQSSQNMFEDHLQ 61

Query: 57  -----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV V +I  +   F   + PGHP A+ +G++  PN+NV+ E  DM    R Y
Sbjct: 62  QAMDTNVQGVEVSRIQPNSRDFRTVYQPGHPDADENGMLTLPNINVMEEVVDMMTAMRSY 121

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  IK +  M T  L++ R
Sbjct: 122 EANISAIKSAQRMATKALEIGR 143


>gi|118444436|ref|YP_877973.1| flagellar basal body rod protein FlgC [Clostridium novyi NT]
 gi|118134892|gb|ABK61936.1| flagellar basal-body rod protein FlgC [Clostridium novyi NT]
          Length = 145

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 70/142 (49%), Gaps = 13/142 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVMH------G 57
            +S  I+ SGLA +  RM  IS NI N +TT    G   PY RK   F+E +       G
Sbjct: 4   FSSMRISASGLAAERLRMDTISSNITNFKTTRGKDGQRQPYIRKIAVFKENLKKELNKSG 63

Query: 58  SG------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            G      GV+   I  D+S     ++P HP A+ +G V  PNVN+L E ADM    R Y
Sbjct: 64  KGYESRLNGVKAVGIVEDKSPLRRVYNPNHPDADENGYVLMPNVNILNEMADMIAATRAY 123

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I  S +M    L++ R
Sbjct: 124 EANVTAINSSKNMFMKALEIGR 145


>gi|153951079|ref|YP_001398445.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152938525|gb|ABS43266.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 164

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 76/165 (46%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIAN  TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMSVISSNIANVNTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            E++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NEQINKNNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|161526188|ref|YP_001581200.1| flagellar basal body rod protein FlgC [Burkholderia multivorans
           ATCC 17616]
 gi|189349096|ref|YP_001944724.1| flagellar basal body rod protein FlgC [Burkholderia multivorans
           ATCC 17616]
 gi|221199737|ref|ZP_03572780.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2M]
 gi|221208658|ref|ZP_03581658.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2]
 gi|221215569|ref|ZP_03588532.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD1]
 gi|160343617|gb|ABX16703.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           ATCC 17616]
 gi|189333118|dbj|BAG42188.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
           17616]
 gi|221164557|gb|EED97040.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD1]
 gi|221171469|gb|EEE03916.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2]
 gi|221179976|gb|EEE12380.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2M]
          Length = 141

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 12/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---------EVMHGSG 59
           +A S L+ QS R+ + + N+ANA + TG  P   PY+ K + F              G G
Sbjct: 10  VAGSALSAQSQRLNVTASNLANADSATG--PDGKPYKAKQVVFATDPIGGARTASGQGVG 67

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y AN++T+ 
Sbjct: 68  GVRVTKVIDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSYQANVETLN 127

Query: 120 QSHDMMTTTLDL 131
            +  +M  TL +
Sbjct: 128 TAKQLMLKTLTI 139


>gi|212709490|ref|ZP_03317618.1| hypothetical protein PROVALCAL_00532 [Providencia alcalifaciens DSM
           30120]
 gi|212687828|gb|EEB47356.1| hypothetical protein PROVALCAL_00532 [Providencia alcalifaciens DSM
           30120]
          Length = 134

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L++   I++S L  QS R+ + + N+ANA +    P  +PYR K + F+    G    GG
Sbjct: 3   LLSIFDISSSALTAQSQRLNVSASNMANAESVVG-PDGEPYRAKQVVFQMAPQGRNQVGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +    E+ PGHP+A+  G VK PNV+ + E  +    +R Y ANL+ +  
Sbjct: 62  VRVSELIDDPAPPRMEYKPGHPLADEKGYVKMPNVDTVGEMINTISASRSYQANLEVMNT 121

Query: 121 SHDMMTTTLDL 131
           +  ++  TL L
Sbjct: 122 AKTLLQKTLTL 132


>gi|94264091|ref|ZP_01287890.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
 gi|93455507|gb|EAT05697.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
          Length = 144

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 17/147 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           MD L A  +I+ S L  + +R+ I S N+ANA TT    G  PYR K++ FE        
Sbjct: 1   MDILTA-MNISGSALKAERSRLNIASMNMANANTTRTVEGG-PYRAKSVVFEARPLERDF 58

Query: 54  --VMHGSGGVRVKKIGV-----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
              + G+   R++K+ V     D++ F E ++P HP A+ +GIV+YPNVN   +  DM  
Sbjct: 59  NTTLQGAAS-RLRKVEVAEVVEDRAPFREVYEPHHPDADENGIVRYPNVNTAEQMVDMMN 117

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  +    +M    L++ R
Sbjct: 118 ARRSYEANVAALDAVKEMALRALEISR 144


>gi|134297200|ref|YP_001120935.1| flagellar basal body rod protein FlgC [Burkholderia vietnamiensis
           G4]
 gi|134140357|gb|ABO56100.1| flagellar basal-body rod protein FlgC [Burkholderia vietnamiensis
           G4]
          Length = 141

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 12/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---------EVMHGSG 59
           +A S L+ QS R+ + + N+ANA + TG  P   PY+ K + F              G G
Sbjct: 10  VAGSALSAQSQRLNVTASNLANADSATG--PDGKPYKAKQVVFATDPLGGARTASGQGVG 67

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y AN++T+ 
Sbjct: 68  GVRVTKVVDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSYQANVETLN 127

Query: 120 QSHDMMTTTLDL 131
            +  +M  TL +
Sbjct: 128 TAKTLMLKTLTI 139


>gi|261344144|ref|ZP_05971788.1| flagellar basal-body rod protein FlgC [Providencia rustigianii DSM
           4541]
 gi|282567736|gb|EFB73271.1| flagellar basal-body rod protein FlgC [Providencia rustigianii DSM
           4541]
          Length = 134

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L++   I+ S L  QS R+ + + N+ANA +    P   PYR K + F+   +  H  GG
Sbjct: 3   LLSIFDISASALTAQSQRLNVSASNMANAESVAG-PDGQPYRAKQVVFQMAPQGRHQVGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D S    E+ PGHP+A+  G V+ PNV+ + E  +    +R Y ANL+ +  
Sbjct: 62  VRVSELIEDPSPPRMEYKPGHPLADEKGYVQMPNVDTVGEMINTISASRSYQANLEVMNT 121

Query: 121 SHDMMTTTLDL 131
           +  ++  TL L
Sbjct: 122 AKTLLQKTLTL 132


>gi|163789652|ref|ZP_02184090.1| Flagellar basal body rod protein FlgC [Carnobacterium sp. AT7]
 gi|159875184|gb|EDP69250.1| Flagellar basal body rod protein FlgC [Carnobacterium sp. AT7]
          Length = 145

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 12/140 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           +  S  I  SGL+++  ++  IS NIAN  TT    G  PY +K + FEE +       +
Sbjct: 3   IFDSMQINASGLSLERLKLDTISTNIANVNTTRTEDGEGPYLKKEVVFEESLKQVETSLN 62

Query: 57  GSG-----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           G G     GV+  +I  +    V E+DP HP AN  G V+  NVN+  E  DM  T R Y
Sbjct: 63  GQGTEKSFGVKPTEIRENTDDIVMEYDPTHPDANEEGYVQQSNVNMADEMIDMMTTLRTY 122

Query: 112 MANLQTIKQSHDMMTTTLDL 131
            AN+  +  S +M++  L +
Sbjct: 123 DANVTAMNASKEMLSKALQI 142


>gi|295096227|emb|CBK85317.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 134

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+ +   G+  GGV+V  
Sbjct: 9   IAGSALTAQSKRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVDAAPGAATGGVKVAD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+ASG VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VVESQAPDKLVYEPGNPLADASGYVKMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|317492430|ref|ZP_07950859.1| flagellar basal-body rod protein FlgC [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919769|gb|EFV41099.1| flagellar basal-body rod protein FlgC [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 134

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHG--SGGVRVKK 65
           I+ S LA QS RM + + N+ANA + TG  P  +PYR K + FE +   G  +GGV+V +
Sbjct: 9   ISGSALAAQSQRMNVAASNMANADSVTG--PDGEPYRAKQVVFEVQAAPGQETGGVKVSQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D S     + PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  +  +M
Sbjct: 67  LVDDPSPERLVYQPGNPLADAKGYVRMPNVDVVGEMVNSIAASRSYQANVEVLNTTKSLM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 MKTLTL 132


>gi|308050374|ref|YP_003913940.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
 gi|307632564|gb|ADN76866.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
          Length = 139

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 8/128 (6%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
           A SG++ QS R+   + NIANA +   + G + YR +   FE  +  + G + + + V  
Sbjct: 10  AGSGMSAQSVRLNTTASNIANANSVSSSAG-ETYRARQPIFEAALQQASGYQNQSVPVQV 68

Query: 71  STFVE-------EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +  VE       +F P HP+A+  G +  PNVNV+ E A+M   +R Y AN+Q    + D
Sbjct: 69  AGIVESDKPLVRQFSPNHPLADQEGYIYKPNVNVVEEMANMISASRSYQANVQVASAAKD 128

Query: 124 MMTTTLDL 131
           M   TL L
Sbjct: 129 MAQQTLRL 136


>gi|94968682|ref|YP_590730.1| flagellar basal-body rod protein FlgC [Candidatus Koribacter
           versatilis Ellin345]
 gi|94550732|gb|ABF40656.1| flagellar basal-body rod protein FlgC [Candidatus Koribacter
           versatilis Ellin345]
          Length = 145

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 17/141 (12%)

Query: 9   HIANSG--LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--------- 57
            I  SG  +A +  R +I++ N+ANA TT    G  PYRRK + F               
Sbjct: 6   QIRTSGGAMAAERLRAEIVAGNMANAETTRTAEGG-PYRRKQVIFSSAQPTFGMVLAKAG 64

Query: 58  -----SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                 GGVRV  I  D    V  ++PGHP ANA G+V YPN++ + ET D+    R Y 
Sbjct: 65  GEPAIGGGVRVLDIVQDSRDPVLRYEPGHPDANAEGMVAYPNIDPIEETVDLMSALRSYQ 124

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N   ++ +  M+  +L++L+
Sbjct: 125 LNASAVQAAKQMIQQSLEILK 145


>gi|242309757|ref|ZP_04808912.1| flagellar basal body rod protein FlgC [Helicobacter pullorum MIT
           98-5489]
 gi|239523758|gb|EEQ63624.1| flagellar basal body rod protein FlgC [Helicobacter pullorum MIT
           98-5489]
          Length = 166

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 36/165 (21%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R+ +IS NIANA TT    G  PYRR     K  +F++V++  
Sbjct: 2   FLSSFDISGYGLSAQRQRVNLISSNIANANTTRTDEGG-PYRRRELILKAFNFDKVLNQK 60

Query: 59  G------------------------------GVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V KI  D S    +++P HP AN+ G
Sbjct: 61  YENSNNLLKYEDPLDEMDSFDEQREPKPTLMSVYVDKIVRDDSQPKMKYEPSHPDANSEG 120

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N +VE AD+ E  + Y AN+   + + +M TT + + +
Sbjct: 121 YVAYPNINPVVEMADLIEATKAYQANVAAFQSAKNMATTAISMFQ 165


>gi|115353120|ref|YP_774959.1| flagellar basal body rod protein FlgC [Burkholderia ambifaria AMMD]
 gi|170703094|ref|ZP_02893914.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           IOP40-10]
 gi|171321836|ref|ZP_02910737.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
 gi|172061974|ref|YP_001809626.1| flagellar basal body rod protein FlgC [Burkholderia ambifaria
           MC40-6]
 gi|115283108|gb|ABI88625.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria AMMD]
 gi|170131991|gb|EDT00499.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           IOP40-10]
 gi|171092874|gb|EDT38126.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
 gi|171994491|gb|ACB65410.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MC40-6]
          Length = 141

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 12/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--------G 59
           +A S L+ QS R+ + + N+ANA + TG  P   PY+ K + F  + M G+        G
Sbjct: 10  VAGSALSAQSQRLNVTASNLANADSATG--PDGKPYKAKQVVFATDPMGGARTASGQGVG 67

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y AN++T+ 
Sbjct: 68  GVRVTKVMDDPSPMKSTYDPANPSADANGYVQMPNVDPVQEMVNMISASRSYQANVETLN 127

Query: 120 QSHDMMTTTLDL 131
            +  +M  TL +
Sbjct: 128 TAKTLMLKTLTI 139


>gi|293395581|ref|ZP_06639864.1| flagellar basal-body rod protein FlgC [Serratia odorifera DSM 4582]
 gi|291421900|gb|EFE95146.1| flagellar basal-body rod protein FlgC [Serratia odorifera DSM 4582]
          Length = 134

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 4/125 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGVRVKKI 66
           I+ S L+ QS R+ + + N+ANA +    P   PYR K + FE        +GGVRV  I
Sbjct: 9   ISGSALSAQSQRLNVSASNMANADSVSG-PDGQPYRAKQVVFEVAAAPGQPTGGVRVASI 67

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D +     F PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  +  MM 
Sbjct: 68  VDDPAPERLVFQPGNPLADAKGYVRMPNVDVVGEMVNTISASRSYQANVEVLNTTKSMMM 127

Query: 127 TTLDL 131
            TL L
Sbjct: 128 KTLTL 132


>gi|51598553|ref|YP_072741.1| flagellar basal body rod protein FlgC [Borrelia garinii PBi]
 gi|51573124|gb|AAU07149.1| flagellar basal-body rod protein [Borrelia garinii PBi]
          Length = 152

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F   +        
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVSNPYWKGP 61

Query: 56  -------HGSG-GVRVKKIGVDQSTFVEEFDPGHP----VANASGIVKYPNVNVLVETAD 103
                  +G G GVRV  I  D+S    ++DP HP      +  G V+ PNVN++ E  D
Sbjct: 62  FIPNYLDNGIGQGVRVVNIEKDKSPLKLKYDPTHPDSISFGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   +  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVVNSSKSMFRSALAILQ 151


>gi|146311244|ref|YP_001176318.1| flagellar basal body rod protein FlgC [Enterobacter sp. 638]
 gi|145318120|gb|ABP60267.1| flagellar basal-body rod protein FlgC [Enterobacter sp. 638]
          Length = 134

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHG--SGGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+ +   G  +GGV+V  
Sbjct: 9   IAGSALTAQSQRLNVAASNMANADSVTG--PDGQPYRAKQVVFQVDAAPGGATGGVKVSS 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     F+PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VVESQAPDKLVFEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|318605240|emb|CBY26738.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 134

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L+ QS R+ + + N+ANA + TG  P   PYR K + F+   +    +GGVRV +
Sbjct: 9   IAGSALSAQSQRLNVSASNMANADSVTG--PDGQPYRAKQVVFQVAAQPGQETGGVRVAQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  D +     F PG+P+ANA G V+ PNV+V  E  +    +R Y AN++ +  +  +M
Sbjct: 67  IIDDPAPDRLVFQPGNPLANAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|28211332|ref|NP_782276.1| flagellar basal body rod protein FlgC [Clostridium tetani E88]
 gi|28203772|gb|AAO36213.1| flagellar basal-body rod protein flgC [Clostridium tetani E88]
          Length = 143

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 23/142 (16%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---------------EE 53
            I+ SGL+ +  R+  I+ NI N+R+T    G +PYRRK   F               EE
Sbjct: 8   RISASGLSAERLRIDTIASNIVNSRSTRGKNG-EPYRRKVAIFQENLTKEINKQTGKREE 66

Query: 54  VMHGSGGVRVKKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           V+ G     VK IG+  D S F   ++P HP A+ +G V  PNVN L E AD+    R Y
Sbjct: 67  VLKG-----VKAIGIQEDMSEFRRVYEPSHPDADENGYVLMPNVNALNEVADLIAATRSY 121

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I  S  M    L++ R
Sbjct: 122 EANVDAINSSKSMFMKALEIGR 143


>gi|229017032|ref|ZP_04173952.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1273]
 gi|229023213|ref|ZP_04179724.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1272]
 gi|228738138|gb|EEL88623.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1272]
 gi|228744303|gb|EEL94385.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1273]
          Length = 137

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 75/131 (57%), Gaps = 12/131 (9%)

Query: 13  SGLAVQSAR--MQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGS--GGVR 62
           SG A+ +AR  M++ S NI NA TTG  P ++PY R+++      +F  ++ G+   GV+
Sbjct: 8   SGSALTTARKWMEVTSNNIVNANTTG-APDAEPYHRRSVVLESNNNFANMLEGAPANGVK 66

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           +K I  D++  +  +DP HP AN  G V+YPN+NV  E  ++    ++Y AN   +  + 
Sbjct: 67  IKSIETDRNENLV-YDPTHPHANEEGYVRYPNINVTAEMTNVMVAQKMYEANTSVLNANK 125

Query: 123 DMMTTTLDLLR 133
            M+   L++ R
Sbjct: 126 KMLDKDLEIGR 136


>gi|238028851|ref|YP_002913082.1| flagellar basal body rod protein FlgC [Burkholderia glumae BGR1]
 gi|237878045|gb|ACR30378.1| Flagellar basal-body rod protein FlgC [Burkholderia glumae BGR1]
          Length = 141

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 12/141 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE------- 52
           M  L+    +A S ++ +S R+ + + N+ANA + TG  P   PYR K + FE       
Sbjct: 1   MPSLMNIFDVAGSAMSAESQRLNVTASNLANADSVTG--PDGKPYRAKQVVFETQPLGGA 58

Query: 53  --EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                 G GGV+VK++  D S     +DP +P A+A+G V  PNV+ + E  +M   +R 
Sbjct: 59  RTRSGQGVGGVQVKQVIDDPSPMKTSYDPSNPTADANGYVTLPNVDPVQEMVNMISASRS 118

Query: 111 YMANLQTIKQSHDMMTTTLDL 131
           Y AN++T+  +  +M  TL +
Sbjct: 119 YQANVETLNTAKQLMLKTLTI 139


>gi|311280019|ref|YP_003942250.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae SCF1]
 gi|308749214|gb|ADO48966.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae SCF1]
          Length = 134

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 6/132 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSG 59
           L++   +A S L  QS R+ + + N+ANA + TG  P   PYR K + F+    +   +G
Sbjct: 3   LLSIFDVAGSALTAQSKRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVDAPIGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     F PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVANVVESQAPDKLVFQPGNPLADAKGYVRMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDL 131
               MM  TL L
Sbjct: 121 TVKSMMLKTLTL 132


>gi|22126392|ref|NP_669815.1| flagellar basal body rod protein FlgC [Yersinia pestis KIM 10]
 gi|45441411|ref|NP_992950.1| flagellar basal body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51596009|ref|YP_070200.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 32953]
 gi|108807171|ref|YP_651087.1| flagellar basal body rod protein FlgC [Yersinia pestis Antiqua]
 gi|108812485|ref|YP_648252.1| flagellar basal body rod protein FlgC [Yersinia pestis Nepal516]
 gi|145598612|ref|YP_001162688.1| flagellar basal body rod protein FlgC [Yersinia pestis Pestoides F]
 gi|149366253|ref|ZP_01888288.1| flagellar basal-body rod protein FlgC [Yersinia pestis CA88-4125]
 gi|153947032|ref|YP_001401292.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
 gi|162420507|ref|YP_001606471.1| flagellar basal body rod protein FlgC [Yersinia pestis Angola]
 gi|165926046|ref|ZP_02221878.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938792|ref|ZP_02227347.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010857|ref|ZP_02231755.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166211044|ref|ZP_02237079.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401147|ref|ZP_02306650.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167420240|ref|ZP_02311993.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425758|ref|ZP_02317511.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167469718|ref|ZP_02334422.1| flagellar basal-body rod protein FlgC [Yersinia pestis FV-1]
 gi|170024649|ref|YP_001721154.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186895112|ref|YP_001872224.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|218928920|ref|YP_002346795.1| flagellar basal body rod protein FlgC [Yersinia pestis CO92]
 gi|229896240|ref|ZP_04511410.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides A]
 gi|229897175|ref|ZP_04512331.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229897901|ref|ZP_04513052.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902867|ref|ZP_04517984.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
 gi|270486647|ref|ZP_06203721.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294504032|ref|YP_003568094.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|21959379|gb|AAM86066.1|AE013854_2 cell-proximal portion of basal-body rod protein [Yersinia pestis
           KIM 10]
 gi|45436272|gb|AAS61827.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51589291|emb|CAH20912.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           IP 32953]
 gi|108776133|gb|ABG18652.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
 gi|108779084|gb|ABG13142.1| flagellar basal-body rod protein FlgC [Yersinia pestis Antiqua]
 gi|115347531|emb|CAL20440.1| flagellar basal-body rod protein FlgC [Yersinia pestis CO92]
 gi|145210308|gb|ABP39715.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides F]
 gi|149292666|gb|EDM42740.1| flagellar basal-body rod protein FlgC [Yersinia pestis CA88-4125]
 gi|152958527|gb|ABS45988.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
 gi|162353322|gb|ABX87270.1| flagellar basal-body rod protein FlgC [Yersinia pestis Angola]
 gi|165913406|gb|EDR32028.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922250|gb|EDR39427.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990201|gb|EDR42502.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166208224|gb|EDR52704.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961935|gb|EDR57956.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049536|gb|EDR60944.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055157|gb|EDR64954.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751183|gb|ACA68701.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186698138|gb|ACC88767.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|229680314|gb|EEO76413.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
 gi|229688942|gb|EEO81007.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693512|gb|EEO83561.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701163|gb|EEO89192.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides A]
 gi|262361782|gb|ACY58503.1| flagellar basal body rod protein [Yersinia pestis D106004]
 gi|262366082|gb|ACY62639.1| flagellar basal body rod protein [Yersinia pestis D182038]
 gi|270335151|gb|EFA45928.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294354491|gb|ADE64832.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|320015469|gb|ADV99040.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 134

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L+ QS RM + + N+ANA + TG  P   PYR K + F+   +    +GGVRV +
Sbjct: 9   IAGSALSAQSQRMNVSASNLANADSVTG--PDGQPYRAKQVVFQVAAQPGQETGGVRVAQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  D S     + PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  +  +M
Sbjct: 67  IVDDPSPDRLVYQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|270262403|ref|ZP_06190674.1| flagellar basal-body rod protein FlgC [Serratia odorifera 4Rx13]
 gi|270043087|gb|EFA16180.1| flagellar basal-body rod protein FlgC [Serratia odorifera 4Rx13]
          Length = 134

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           I+ S L+ QS RM + + N+ANA + TG  P  +PYR K + FE        +GGVRV +
Sbjct: 9   ISGSALSAQSQRMNVSASNMANADSVTG--PDGEPYRAKQVVFEVAAAAGQPTGGVRVSQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D +     + PG+P+A+  G V+ PNV+V+ E  +    +R Y AN++ +  +  MM
Sbjct: 67  VVDDPAPERLVYQPGNPLADGKGYVRMPNVDVVSEMVNTISASRSYQANVEVLNTTKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 MKTLTL 132


>gi|238751760|ref|ZP_04613248.1| Flagellar basal-body rod protein flgC [Yersinia rohdei ATCC 43380]
 gi|238710031|gb|EEQ02261.1| Flagellar basal-body rod protein flgC [Yersinia rohdei ATCC 43380]
          Length = 134

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L+ QS RM + + N+ANA + TG  P   PYR K + F+   +    +GGVRV +
Sbjct: 9   IAGSALSAQSQRMNVSASNMANADSVTG--PDGQPYRAKQVVFQVAAQPGQETGGVRVAQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  +  +M
Sbjct: 67  IVDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|330818587|ref|YP_004362292.1| flagellar basal-body rod protein FlgC [Burkholderia gladioli BSR3]
 gi|327370980|gb|AEA62336.1| flagellar basal-body rod protein FlgC [Burkholderia gladioli BSR3]
          Length = 141

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 12/141 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE------- 52
           M  L+    +A S ++ +S R+ + + N+ANA + TG  P   PYR K + FE       
Sbjct: 1   MPSLMNIFDVAGSAMSAESQRLNVTASNLANADSVTG--PDGKPYRAKQVVFETQPVGNA 58

Query: 53  --EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                 G GGV+VK++  D S     +DP +P A+A+G V  PNV+ + E  +M   +R 
Sbjct: 59  RTRSGQGVGGVQVKQVIDDPSPMKTNYDPSNPAADANGYVTMPNVDPVQEMVNMISASRS 118

Query: 111 YMANLQTIKQSHDMMTTTLDL 131
           Y AN++T+  +  +M  TL +
Sbjct: 119 YQANVETLNTAKQLMLKTLTI 139


>gi|56419752|ref|YP_147070.1| flagellar basal body rod protein FlgC [Geobacillus kaustophilus
           HTA426]
 gi|56379594|dbj|BAD75502.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426]
          Length = 150

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 24/149 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTI-------S 50
           L  S +I+ S L  Q  RM +I+ NIAN  TT      G+    +PYRRK +       S
Sbjct: 3   LFQSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEW---EPYRRKMVIIEPRSGS 59

Query: 51  FEEVMHGS--------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           F   +  +        GGVRV++I  D + F   +DP HP A A G V+ PNV+ L E  
Sbjct: 60  FSGYLQAALGRADAVDGGVRVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEMV 119

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           D+    R Y AN+  +  S  M+   L++
Sbjct: 120 DLIGATRSYEANVTVLNASKGMLMKALEI 148


>gi|172057890|ref|YP_001814350.1| flagellar basal-body rod protein FlgC [Exiguobacterium sibiricum
           255-15]
 gi|171990411|gb|ACB61333.1| flagellar basal-body rod protein FlgC [Exiguobacterium sibiricum
           255-15]
          Length = 132

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 6/131 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT-GDTPGSD--PYRRKTISFEEVMHGSGG 60
           + +  H + +GL  Q  R+  +S NIANA+TT G+    +  PY RK    +E   GSG 
Sbjct: 3   MFSGFHTSATGLTAQRLRLDTVSANIANAQTTRGELVNGEWQPYARKLAVLKET--GSG- 59

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V +I  DQ  F  E++P HP A+  G VK PNV++L E  DM    R Y AN+  +  
Sbjct: 60  VTVSEIRKDQEPFKLEYNPNHPDADELGYVKMPNVDLLKEMVDMMGATRSYEANVTALNA 119

Query: 121 SHDMMTTTLDL 131
           +  M+   +++
Sbjct: 120 TKAMLVKAMEI 130


>gi|238758112|ref|ZP_04619292.1| Flagellar basal-body rod protein flgC [Yersinia aldovae ATCC 35236]
 gi|238703650|gb|EEP96187.1| Flagellar basal-body rod protein flgC [Yersinia aldovae ATCC 35236]
          Length = 134

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L+ QS R+ + + N+ANA + TG  P   PYR K + F+   +    +GGVRV +
Sbjct: 9   IAGSALSAQSQRLNVSASNMANAESVTG--PDGQPYRAKQVVFQVAAQAGQETGGVRVSQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  +  +M
Sbjct: 67  IVDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMINTISASRSYQANVEVLNTTKSLM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|297530608|ref|YP_003671883.1| flagellar basal-body rod protein FlgC [Geobacillus sp. C56-T3]
 gi|297253860|gb|ADI27306.1| flagellar basal-body rod protein FlgC [Geobacillus sp. C56-T3]
          Length = 150

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 24/149 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTI-------S 50
           L  S +I+ S L  Q  RM +I+ NIAN  TT      G+    +PYRRK +       S
Sbjct: 3   LFQSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEW---EPYRRKMVIIEPQSGS 59

Query: 51  FEEVMHGS--------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           F   +  +        GGVRV++I  D + F   +DP HP A A G V+ PNV+ L E  
Sbjct: 60  FSGYLQAALGRADAVDGGVRVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEMV 119

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           D+    R Y AN+  +  S  M+   L++
Sbjct: 120 DLIGATRSYEANVTVLNASKGMLMKALEI 148


>gi|291277450|ref|YP_003517222.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
 gi|290964644|emb|CBG40498.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
          Length = 164

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 73/162 (45%), Gaps = 33/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  IIS NIANA TT    G  PYRR     K   F ++++  
Sbjct: 3   FLSSFDISGYGLSAQRFRTNIISSNIANANTTRTDEGG-PYRRQEVVFKAFDFNKILNEK 61

Query: 59  ---------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
                                        V V K+  D    + ++DP HP ANA G V 
Sbjct: 62  IAKENENLAYEDPLDEKEFGKLPKPAIMSVYVDKVVRDDREPLMKYDPSHPDANADGYVA 121

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           YPNVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 YPNVNPVVEMADLIEATRAYQANVAAFQSAKNMANNAITMLQ 163


>gi|78042758|ref|YP_359838.1| flagellar basal-body rod protein FlgC [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77994873|gb|ABB13772.1| flagellar basal-body rod protein FlgC [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 138

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
             +S  I  S L      +  I +NIANA TT  TP    Y RK + FEE++        
Sbjct: 3   FFSSFQITASALTAHRLWLDTIVDNIANANTT-RTPAGGTYNRKDVIFEEILEAKAGFKG 61

Query: 59  GGVRVKKIGVDQST-FVEEFDPGHPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           GGVRV +I  D  T +   F+P HP A+  +G+VKYPNVN+  E  ++    R Y AN+ 
Sbjct: 62  GGVRVSQIVEDTKTPYRYVFNPNHPDADPNTGLVKYPNVNINDEIVNLLAAQRAYEANVT 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M    L+L R
Sbjct: 122 VFNTAKAMYAKALELSR 138


>gi|228938858|ref|ZP_04101458.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971739|ref|ZP_04132360.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978348|ref|ZP_04138725.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           Bt407]
 gi|228781365|gb|EEM29566.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           Bt407]
 gi|228787829|gb|EEM35787.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228820707|gb|EEM66732.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326939358|gb|AEA15254.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 137

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHG--SGGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++ G  + GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDGAPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++  T ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVTQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|161503737|ref|YP_001570849.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865084|gb|ABX21707.1| hypothetical protein SARI_01822 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 134

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALTAQSKRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVDAAPGQATGGVKVAS 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VIESQAPEKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|323341388|ref|ZP_08081632.1| flagellar basal-body rod protein FlgC [Lactobacillus ruminis ATCC
           25644]
 gi|323091265|gb|EFZ33893.1| flagellar basal-body rod protein FlgC [Lactobacillus ruminis ATCC
           25644]
          Length = 139

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 10/134 (7%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--------GSGG 60
            I  SGL+++  ++ + S NIAN  TT    G  PY++KT+ F E +          S G
Sbjct: 8   QINASGLSLERMKLDVASTNIANVNTTRTAEGG-PYKKKTVEFSENLRQAQGTNKITSAG 66

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  I  D +T +  +DP +P A+A+G V+ PNVN+  E  DM +  R Y AN+ + + 
Sbjct: 67  VKVTNIAEDNTTKLT-YDPTNPDADANGYVEMPNVNMADEMVDMIQAMRTYEANVSSTEA 125

Query: 121 SHDMMTTTLDLLRD 134
           + +++   L++ +D
Sbjct: 126 NKNILKKALEISKD 139


>gi|51894141|ref|YP_076832.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51857830|dbj|BAD41988.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 147

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 71/137 (51%), Gaps = 17/137 (12%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE--------VMHGSG----- 59
           S L  +  RM +I+ N+AN RTT    G  PYRR+T+  EE        +   +G     
Sbjct: 12  SALTAERLRMDVIANNLANYRTTRTAEGG-PYRRRTVVVEERPNTFASELARQAGRPAEP 70

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GVRV +I  D S F E  DP HP A+  +GIV+ PNV++L E  D+    R+Y ANL 
Sbjct: 71  GLGVRVTQIVEDPSPFKEVHDPTHPDADPVTGIVRLPNVDLLQEITDLMLAQRMYDANLT 130

Query: 117 TIKQSHDMMTTTLDLLR 133
               + +M    L++ R
Sbjct: 131 AFNAAKNMALRALEIGR 147


>gi|32490788|ref|NP_871042.1| hypothetical protein WGLp039 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165994|dbj|BAC24185.1| flgC [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 133

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 5/125 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGGVRVKKI 66
           I+ S L  QS R+ + + N+ANA +  +    +PY  K + F+         GGV+VKKI
Sbjct: 9   ISGSALIAQSCRLNVSASNMANAESLSNN--GNPYSSKQVVFKLNTNFAQEIGGVKVKKI 66

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D++ +   +DPG+P+A++ G VK  NVN++ E  +   ++R Y AN++ I  +  M+ 
Sbjct: 67  IEDKTPWKILYDPGNPLADSKGYVKSSNVNMISEMINTISSSRSYQANVEVINTARSMIL 126

Query: 127 TTLDL 131
            TL L
Sbjct: 127 KTLTL 131


>gi|170722894|ref|YP_001750582.1| flagellar basal body rod protein FlgC [Pseudomonas putida W619]
 gi|169760897|gb|ACA74213.1| flagellar basal-body rod protein FlgC [Pseudomonas putida W619]
          Length = 147

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK----TISFEEVMHGSG----- 59
           +IA SG++ Q+ R+  ++ NIANA T   +     YR +      +F+    G       
Sbjct: 8   NIAGSGMSAQNTRLNTVASNIANAETVSSSI-DQTYRARHPVFATTFQNAQAGGSQSLFE 66

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+VK I  DQS     ++P HP AN  G V YPNVNV+ E ADM   +R + 
Sbjct: 67  DQGEAGQGVQVKGIIEDQSNLEARYEPNHPAANKDGYVYYPNVNVVEEMADMISASRAFQ 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N + +  + +MM   L L
Sbjct: 127 TNAELMNTAKNMMQKVLTL 145


>gi|229172391|ref|ZP_04299950.1| Flagellar basal-body rod protein FlgC [Bacillus cereus MM3]
 gi|228610862|gb|EEK68125.1| Flagellar basal-body rod protein FlgC [Bacillus cereus MM3]
          Length = 137

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGS--GGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++ GS   GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLEGSPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|224437870|ref|ZP_03658817.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
           18818]
 gi|313144319|ref|ZP_07806512.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
           18818]
 gi|313129350|gb|EFR46967.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
           18818]
          Length = 163

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 33/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-----SFEEVMHGS 58
            ++S  I+  GL+ Q  R+  IS NIANA TT    G  PYRR+ +      F ++++  
Sbjct: 2   FLSSFDISGYGLSAQRVRVNTISSNIANANTTRTDEGG-PYRRREVVFRAFDFNKILNEK 60

Query: 59  GG---------------------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
            G                           V ++KI  D    + ++DP HP AN+ G V 
Sbjct: 61  LGKNNQQLKYEDPLNEGDLGKEPKPAIMSVYIQKIVRDDREPLMKYDPSHPDANSEGYVA 120

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           YPNVN +VE AD+ E  R Y AN+   + + +M +  + + +
Sbjct: 121 YPNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAITMFQ 162


>gi|147678426|ref|YP_001212641.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
           SI]
 gi|146274523|dbj|BAF60272.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
           SI]
          Length = 147

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 14/144 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTG--DTPGSDPYRRKTISFEEVM------ 55
           L  S  I+ SGL  +  R+ +IS NIAN  T G  D P    YRR+   F +V+      
Sbjct: 3   LFDSFAISASGLTAERLRLDLISNNIANMNTAGRPDDPAVPAYRRRFPVFAQVLQEVRSA 62

Query: 56  ------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                 +   GVRV +I  D S     ++P HP+A+  G V YPN+N++ E  +M    R
Sbjct: 63  GTARPRYKGAGVRVIRIVEDHSPPRLAYEPSHPLADERGYVAYPNINIVNEMINMITATR 122

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +  + D+    +++ R
Sbjct: 123 SYEANVTALNAAKDIALKAIEIGR 146


>gi|238788313|ref|ZP_04632107.1| Flagellar basal-body rod protein flgC [Yersinia frederiksenii ATCC
           33641]
 gi|238723559|gb|EEQ15205.1| Flagellar basal-body rod protein flgC [Yersinia frederiksenii ATCC
           33641]
          Length = 134

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L+ QS RM + + N+ANA + TG  P   PYR K + F+   +    +GGVRV +
Sbjct: 9   IAGSALSAQSQRMNVSASNMANADSVTG--PDGQPYRAKQVVFQVAAQPGQETGGVRVAQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  +  +M
Sbjct: 67  VVDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|261339374|ref|ZP_05967232.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
 gi|288318175|gb|EFC57113.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
          Length = 134

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 4/125 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKKI 66
           IA S L  QS R+ + + N+ANA +    P   PYR K + F+ +   G+  GGV+V  +
Sbjct: 9   IAGSALTAQSKRLNVAASNLANADSVAG-PDGQPYRAKQVVFQVDAAPGAATGGVKVSDV 67

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +     MM 
Sbjct: 68  VESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMML 127

Query: 127 TTLDL 131
            TL L
Sbjct: 128 KTLTL 132


>gi|253573516|ref|ZP_04850859.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847044|gb|EES75049.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 149

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 69/139 (49%), Gaps = 17/139 (12%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTI-------SFEEVMHG-- 57
           I++S L  Q  RM +IS NIANA TT        + PYRRKT+        F+  ++   
Sbjct: 9   ISSSALTAQRLRMDVISSNIANAETTRAKIVDGKAVPYRRKTVVMAPKEMDFDSALNSVM 68

Query: 58  -----SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                S GV++ KI  D S     ++P HP A++ G V  PNV++L E  DM    R Y 
Sbjct: 69  GKEVSSQGVKITKIQEDPSPLKPVYNPTHPDADSEGYVYMPNVDILKEMVDMISATRSYE 128

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN+  +  S  M T  L +
Sbjct: 129 ANVTALNASKAMFTKALQI 147


>gi|225375315|ref|ZP_03752536.1| hypothetical protein ROSEINA2194_00940 [Roseburia inulinivorans DSM
           16841]
 gi|225212804|gb|EEG95158.1| hypothetical protein ROSEINA2194_00940 [Roseburia inulinivorans DSM
           16841]
          Length = 146

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 16/143 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--EEVMHGS--- 58
           L  +  I+ SG+  +  RM  I+ENIAN  TT    G+ PYRRK ++F  +EV   S   
Sbjct: 3   LFQAFDISASGMTAERFRMDTIAENIANVNTTRTEDGT-PYRRKIVTFAEKEVTSFSRYY 61

Query: 59  ---------GGVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GV+V  +  D  T F+ E+DP +P A+ +G V YPNVN + E  ++ + +
Sbjct: 62  QNARSKFVGNGVKVSSVKEDTETDFIMEYDPSNPDADENGYVSYPNVNTVTEMTNLIDAS 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN    + +  +  + L +
Sbjct: 122 RAYEANTTAFEAAKSIAQSGLSI 144


>gi|32266907|ref|NP_860939.1| flagellar basal body rod protein FlgC [Helicobacter hepaticus ATCC
           51449]
 gi|32262959|gb|AAP78005.1| flagellar basal body rod protein FlgC [Helicobacter hepaticus ATCC
           51449]
          Length = 163

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 33/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-----SFEEVMHGS 58
            ++S  I+  GL+ Q  R+  IS NIANA TT    G  PYRR+ +      F +V++  
Sbjct: 2   FLSSFDISGYGLSAQRVRINTISSNIANANTTRTDEGG-PYRRREVIFRAFDFNKVLNEK 60

Query: 59  GG---------------------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
            G                           V + KI  D    + ++DP HP AN+ G V 
Sbjct: 61  LGKNNQQLRYEDPLNEGDLGKEPKPAIMSVYIPKIVRDDREPLMKYDPSHPDANSEGYVA 120

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           YPNVN +VE AD+ E  R Y AN+   + + +M +  + + +
Sbjct: 121 YPNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAITMFQ 162


>gi|187478183|ref|YP_786207.1| flagellar basal body rod protein FlgC [Bordetella avium 197N]
 gi|115422769|emb|CAJ49297.1| flagellar basal-body rod protein [Bordetella avium 197N]
          Length = 139

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 8/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------EVMH 56
           L++   I+ S LA QS R+ + + N+ANA +    P   PYR + + F+           
Sbjct: 3   LLSIFEISGSALAAQSQRLNVAASNLANADSVAG-PDGQPYRARQVVFQMNPALGQAAGQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GGV+V  +  D S     FDP +P+A+A G V  PNV+ + ET +M   +R Y AN++
Sbjct: 62  EIGGVKVAAVVEDASPLKMVFDPKNPMADAQGYVAMPNVDPVAETVNMIAASRSYQANIE 121

Query: 117 TIKQSHDMMTTTLDL 131
            +  +  +M  TL +
Sbjct: 122 VLNTAKQLMQRTLTI 136


>gi|78067839|ref|YP_370608.1| flagellar basal body rod protein FlgC [Burkholderia sp. 383]
 gi|77968584|gb|ABB09964.1| Flagellar basal-body rod protein FlgC [Burkholderia sp. 383]
          Length = 141

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 12/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---------EVMHGSG 59
           +A S L+ QS R+ + + N+ANA + TG  P   PY+ K + F              G G
Sbjct: 10  VAGSALSAQSQRLNVTASNLANADSATG--PDGKPYKAKQVVFATDPIGGARTASGQGVG 67

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV K+  D S     +DP +P A+++G V+ PNV+ + E  +M   +R Y AN++T+ 
Sbjct: 68  GVRVTKVMDDPSPMKSTYDPSNPAADSNGYVQMPNVDPVQEMVNMISASRSYQANVETLN 127

Query: 120 QSHDMMTTTLDL 131
            +  +M  TL +
Sbjct: 128 TAKTLMLKTLTI 139


>gi|259908814|ref|YP_002649170.1| flagellar basal body rod protein FlgC [Erwinia pyrifoliae Ep1/96]
 gi|224964436|emb|CAX55945.1| Cell-proximal portion of basal-body rod [Erwinia pyrifoliae Ep1/96]
 gi|283478796|emb|CAY74712.1| Flagellar basal-body rod protein flgC [Erwinia pyrifoliae DSM
           12163]
 gi|310767288|gb|ADP12238.1| flagellar basal body rod protein FlgC [Erwinia sp. Ejp617]
          Length = 134

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKK 65
           IA S +A QS R+ + + N+ANA + TG  P   PY  K + F+     GS  GGVRV +
Sbjct: 9   IAGSAMAAQSQRLNVSASNLANADSVTG--PDGQPYVAKQVVFQTNAAPGSPTGGVRVAE 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D +     ++PG+P+A+A G +K PNV+V+ ET +    +R Y AN++ +     MM
Sbjct: 67  VINDPTPAKLVYEPGNPMADARGYIKMPNVDVVAETVNTLSASRSYQANVEVLNTVKQMM 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 MKTLTM 132


>gi|118477180|ref|YP_894331.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis str.
           Al Hakam]
 gi|118416405|gb|ABK84824.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 137

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGS--GGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++ GS   GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDGSLTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|34498342|ref|NP_902557.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
 gi|34104196|gb|AAQ60555.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
          Length = 136

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 6/128 (4%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-----MHGSGGVRV 63
           +I+ S L+ QS R+ +++ N+ANA +   + G  PY+ + + F  V          GVRV
Sbjct: 8   NISGSALSAQSMRLNVVASNLANAESATSSTG-QPYKGRHVVFTAVPVDAAQPQVAGVRV 66

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             +  DQS    +++PG+P+A+  G V  PNVNV+ E ADM   +R Y  N++ +  +  
Sbjct: 67  TSVVEDQSPPRLKYEPGNPLADERGYVTMPNVNVVEEMADMIAASRAYQNNVEMMNTAKS 126

Query: 124 MMTTTLDL 131
           ++  TL L
Sbjct: 127 LLQKTLQL 134


>gi|83589621|ref|YP_429630.1| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC
           39073]
 gi|83572535|gb|ABC19087.1| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC
           39073]
          Length = 145

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 15/144 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           L+ +  I+ SGL  +  R+ II+ N+AN  TT  TP   PYRR+   F E +        
Sbjct: 3   LLPALAISASGLTAERLRLDIIANNLANINTT-RTPRGGPYRREVPVFAERLQEAMGQLP 61

Query: 57  GSGGVRVKKIGVDQSTFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
           G    R    GV+ +  VE+       +DP HP A+A+G V  PN+N++ E  DM   +R
Sbjct: 62  GRPSSRAPGAGVEVAAIVEDNSPPRLVYDPSHPDADANGYVHLPNINIVNEMVDMITASR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +  +  M    L++ R
Sbjct: 122 AYEANVTVLNAAKAMTLKALEIGR 145


>gi|292487937|ref|YP_003530812.1| flagellar basal-body rod protein FlgC [Erwinia amylovora CFBP1430]
 gi|292899156|ref|YP_003538525.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291199004|emb|CBJ46115.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291553359|emb|CBA20404.1| Flagellar basal-body rod protein flgC [Erwinia amylovora CFBP1430]
 gi|312172058|emb|CBX80315.1| Flagellar basal-body rod protein flgC [Erwinia amylovora ATCC
           BAA-2158]
          Length = 134

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKK 65
           IA S +A QS R+ + + N+ANA + TG  P   PY  K + F+     GS  GGVRV +
Sbjct: 9   IAGSAMAAQSQRLNVSASNLANADSATG--PDGQPYVAKQVVFQTNAAPGSPTGGVRVAE 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D +     ++PG+P+A+A G +K PNV+V+ ET +    +R Y AN++ +     MM
Sbjct: 67  VIDDPTPAKLVYEPGNPMADARGYIKMPNVDVVAETVNSMSASRSYQANVEVLNTVKQMM 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 MKTLTM 132


>gi|307310148|ref|ZP_07589798.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|306909866|gb|EFN40360.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|315060352|gb|ADT74679.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli W]
 gi|320200970|gb|EFW75554.1| Flagellar basal-body rod protein FlgC [Escherichia coli EC4100B]
 gi|323379087|gb|ADX51355.1| flagellar basal-body rod protein FlgC [Escherichia coli KO11]
          Length = 134

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALTAQSQRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVNAAPGAATGGVKVAD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   QS     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VIESQSPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|296102910|ref|YP_003613056.1| flagellar basal body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057369|gb|ADF62107.1| flagellar basal body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 134

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+ +   G+  GGV+V  
Sbjct: 9   IAGSALTAQSKRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVDAAPGAATGGVKVSD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VVESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|30261743|ref|NP_844120.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Ames]
 gi|47526963|ref|YP_018312.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184573|ref|YP_027825.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Sterne]
 gi|49480942|ref|YP_035864.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|52143711|ref|YP_083115.1| flagellar basal body rod protein FlgC [Bacillus cereus E33L]
 gi|65319012|ref|ZP_00391971.1| COG1558: Flagellar basal body rod protein [Bacillus anthracis str.
           A2012]
 gi|165869530|ref|ZP_02214189.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0488]
 gi|167633252|ref|ZP_02391577.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0442]
 gi|170686301|ref|ZP_02877523.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0465]
 gi|170706453|ref|ZP_02896913.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0389]
 gi|190566322|ref|ZP_03019240.1| flagellar basal-body rod protein FlgC [Bacillus anthracis
           Tsiankovskii-I]
 gi|196038959|ref|ZP_03106266.1| flagellar basal-body rod protein FlgC [Bacillus cereus NVH0597-99]
 gi|218902859|ref|YP_002450693.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH820]
 gi|227815498|ref|YP_002815507.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. CDC
           684]
 gi|228914323|ref|ZP_04077938.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228926780|ref|ZP_04089848.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228933028|ref|ZP_04095891.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228945347|ref|ZP_04107702.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229090705|ref|ZP_04221938.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-42]
 gi|229121296|ref|ZP_04250527.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 95/8201]
 gi|229155315|ref|ZP_04283426.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 4342]
 gi|229602307|ref|YP_002866143.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0248]
 gi|254683233|ref|ZP_05147094.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723821|ref|ZP_05185607.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           A1055]
 gi|254740994|ref|ZP_05198682.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Kruger B]
 gi|254755237|ref|ZP_05207271.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Vollum]
 gi|254759773|ref|ZP_05211797.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Australia 94]
 gi|300117337|ref|ZP_07055127.1| flagellar basal body rod protein FlgC [Bacillus cereus SJ1]
 gi|301053281|ref|YP_003791492.1| flagellar basal body rod protein [Bacillus anthracis CI]
 gi|30255971|gb|AAP25606.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           Ames]
 gi|47502111|gb|AAT30787.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178500|gb|AAT53876.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           Sterne]
 gi|49332498|gb|AAT63144.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51977180|gb|AAU18730.1| flagellar basal-body rod protein [Bacillus cereus E33L]
 gi|164714970|gb|EDR20488.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0488]
 gi|167531290|gb|EDR93968.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0442]
 gi|170128551|gb|EDS97418.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0389]
 gi|170669998|gb|EDT20739.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0465]
 gi|190562457|gb|EDV16424.1| flagellar basal-body rod protein FlgC [Bacillus anthracis
           Tsiankovskii-I]
 gi|196030104|gb|EDX68704.1| flagellar basal-body rod protein FlgC [Bacillus cereus NVH0597-99]
 gi|218535692|gb|ACK88090.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH820]
 gi|227007024|gb|ACP16767.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. CDC
           684]
 gi|228628240|gb|EEK84956.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 4342]
 gi|228662141|gb|EEL17750.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 95/8201]
 gi|228692647|gb|EEL46373.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-42]
 gi|228814319|gb|EEM60585.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228826629|gb|EEM72400.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228832893|gb|EEM78462.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228845317|gb|EEM90353.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229266715|gb|ACQ48352.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0248]
 gi|298725172|gb|EFI65824.1| flagellar basal body rod protein FlgC [Bacillus cereus SJ1]
 gi|300375450|gb|ADK04354.1| flagellar basal body rod protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 137

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGS--GGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++ GS   GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDGSPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|315648139|ref|ZP_07901240.1| flagellar basal-body rod protein FlgC [Paenibacillus vortex V453]
 gi|315276785|gb|EFU40128.1| flagellar basal-body rod protein FlgC [Paenibacillus vortex V453]
          Length = 149

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 69/138 (50%), Gaps = 17/138 (12%)

Query: 13  SGLAVQSARMQIISENIANARTTG---DTPGSDPYRRKTI-------SFEEVMHG--SG- 59
           S L  Q  RM +IS NIANA TT    +   + PYRRKT+       SFE ++    SG 
Sbjct: 12  SALTAQRLRMDVISSNIANAETTRARIENGQAVPYRRKTVVFQPQQESFEGLLRAQMSGQ 71

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV+V  +  DQ+     ++P HP AN  G V  PNV++  E  DM    R Y AN+
Sbjct: 72  DAGQGVKVAAVQEDQAPLKRVYNPTHPDANTEGYVFMPNVDITKEMVDMLAATRSYEANV 131

Query: 116 QTIKQSHDMMTTTLDLLR 133
             I  S  M+   L++ R
Sbjct: 132 TAINASKAMIMKALEIGR 149


>gi|157146228|ref|YP_001453547.1| flagellar basal body rod protein FlgC [Citrobacter koseri ATCC
           BAA-895]
 gi|157083433|gb|ABV13111.1| hypothetical protein CKO_01985 [Citrobacter koseri ATCC BAA-895]
          Length = 134

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+ +   G+  GGV+V  
Sbjct: 9   IAGSALTAQSKRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVDAAPGAATGGVKVAD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VIESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|203284214|ref|YP_002221954.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
 gi|203287753|ref|YP_002222768.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
 gi|201083657|gb|ACH93248.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
 gi|201084973|gb|ACH94547.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
          Length = 154

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 21/151 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L +S + A++GL  Q  R+ +I+ NIAN  TT    G   YRR+ I F            
Sbjct: 5   LFSSINTASTGLTAQRLRLDVIANNIANVETTRTADGG-AYRRERIIFAPRVVSPYWKGP 63

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETAD 103
              + + +G G GVRV  I  D+S    ++DP HP A  SG     V++PNVNV+ E  D
Sbjct: 64  FVPDYLDNGVGQGVRVSGIEKDKSPLKLQYDPTHPDAIKSGELKGYVEFPNVNVVEEMVD 123

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           M   +R Y AN   I  S  M  + L +L++
Sbjct: 124 MISASRAYEANSSVINSSKSMFRSALSILQN 154


>gi|228907377|ref|ZP_04071235.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           200]
 gi|228852238|gb|EEM97034.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           200]
          Length = 137

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGS--GGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++ GS   GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGTDLYERRSVVLESNNSFASMLDGSPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|196033444|ref|ZP_03100856.1| flagellar basal-body rod protein FlgC [Bacillus cereus W]
 gi|195993878|gb|EDX57834.1| flagellar basal-body rod protein FlgC [Bacillus cereus W]
          Length = 137

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGS--GGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++ GS   GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADIYERRSVVLESNNSFANMLDGSPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|254251189|ref|ZP_04944507.1| flagella basal body rod protein [Burkholderia dolosa AUO158]
 gi|124893798|gb|EAY67678.1| flagella basal body rod protein [Burkholderia dolosa AUO158]
          Length = 141

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 12/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--------G 59
           +A S L+ QS R+ + + N+ANA + TG  P   PY+ K + F  + M G+        G
Sbjct: 10  VAGSALSAQSQRLNVTASNLANADSATG--PDGKPYKAKQVVFATDPMGGARTASGQGVG 67

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV K+  D S     +DP +P A+ +G V+ PNV+ + E  +M   +R Y AN++T+ 
Sbjct: 68  GVRVTKVIDDPSPMKSTYDPANPAADENGYVQMPNVDPVQEMVNMISASRSYQANVETLN 127

Query: 120 QSHDMMTTTLDL 131
            +  +M  TL +
Sbjct: 128 TAKQLMLKTLTI 139


>gi|47566127|ref|ZP_00237165.1| flagellar basal-body rod protein flgC [Bacillus cereus G9241]
 gi|206974761|ref|ZP_03235676.1| flagellar basal-body rod protein FlgC [Bacillus cereus H3081.97]
 gi|217959228|ref|YP_002337776.1| flagellar basal body rod protein FlgC [Bacillus cereus AH187]
 gi|229138444|ref|ZP_04267033.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST26]
 gi|47557044|gb|EAL15374.1| flagellar basal-body rod protein flgC [Bacillus cereus G9241]
 gi|206746780|gb|EDZ58172.1| flagellar basal-body rod protein FlgC [Bacillus cereus H3081.97]
 gi|217065314|gb|ACJ79564.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH187]
 gi|228644981|gb|EEL01224.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST26]
          Length = 137

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGS--GGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++ G+   GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLEGTPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPNV+V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNVDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|315636296|ref|ZP_07891546.1| flagellar basal-body rod protein FlgC [Arcobacter butzleri JV22]
 gi|315479385|gb|EFU70068.1| flagellar basal-body rod protein FlgC [Arcobacter butzleri JV22]
          Length = 154

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 23/146 (15%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--------- 59
           ++A SG++ Q  R+ ++S NIANA+TT    G  PY+++ + FE+V+  +          
Sbjct: 8   NVATSGMSAQRTRINVVSANIANAKTTHTAEGG-PYKKQEVVFEDVLVANTNKRTNTNDV 66

Query: 60  -------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV V+KI    +  V ++DP HP AN  G V YP++N ++E  ++ E
Sbjct: 67  ETTNSPLSESSLRGVGVRKIIQSDAKPVLKYDPTHPDANEKGYVAYPDINPVIEMVNLIE 126

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLL 132
             R Y AN+ +      + + TL++L
Sbjct: 127 AMRSYEANVTSFNTHRGIDSKTLEIL 152


>gi|315281376|ref|ZP_07870013.1| flagellar basal-body rod protein FlgC [Listeria marthii FSL S4-120]
 gi|313614973|gb|EFR88480.1| flagellar basal-body rod protein FlgC [Listeria marthii FSL S4-120]
          Length = 136

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 9/132 (6%)

Query: 10  IANSGLAVQSAR--MQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGSGGV 61
           I  SG A+ +A+  M++ S NIANA ++   PG  P+ RK +       FE  + G+ GV
Sbjct: 5   INTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTGTKGV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   ++ +
Sbjct: 64  KVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQAN 123

Query: 122 HDMMTTTLDLLR 133
             MM   L++ R
Sbjct: 124 EKMMEKDLEIGR 135


>gi|157738153|ref|YP_001490837.1| flagellar basal body rod protein FlgC [Arcobacter butzleri RM4018]
 gi|157700007|gb|ABV68167.1| flagellar basal body rod protein FlgC [Arcobacter butzleri RM4018]
          Length = 154

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 23/146 (15%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--------- 59
           ++A SG++ Q  R+ ++S NIANA+TT    G  PY+++ + FE+V+  +          
Sbjct: 8   NVATSGMSAQRTRINVVSANIANAKTTHTAEGG-PYKKQEVVFEDVLVANTNKRTNANDV 66

Query: 60  -------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV V+KI    +  V ++DP HP AN  G V YP++N ++E  ++ E
Sbjct: 67  ETTNSPLSESSLRGVGVRKIIQSDAKPVLKYDPTHPDANEKGYVAYPDINPVIEMVNLIE 126

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLL 132
             R Y AN+ +      + + TL++L
Sbjct: 127 AMRSYEANVTSFNTHRGIDSKTLEIL 152


>gi|188534172|ref|YP_001907969.1| flagellar basal body rod protein FlgC [Erwinia tasmaniensis Et1/99]
 gi|188029214|emb|CAO97086.1| Cell-proximal portion of basal-body rod [Erwinia tasmaniensis
           Et1/99]
          Length = 134

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKK 65
           IA S +A QS R+ + + N+ANA + TG  P   PY  K + F+     GS  GGV+V +
Sbjct: 9   IAGSAMAAQSQRLNVSASNLANADSVTG--PDGQPYVAKQVVFQTNAAPGSAAGGVKVAE 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D +     ++PG+P+A+A G VK PNV+V+ ET +    +R Y AN++ +     MM
Sbjct: 67  VIDDPAPARLVYEPGNPMADAKGYVKMPNVDVVAETVNTLSASRSYQANVEVLNTVKQMM 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 MKTLTM 132


>gi|23092313|gb|AAN08638.1| FlgC [Aeromonas hydrophila]
          Length = 139

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 6/128 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---SFEEVM---HGSGGVRV 63
           IA S ++ QS R+  ++ N+ANA +   +  +  + R+ I     ++ M     S GV V
Sbjct: 9   IAGSAMSAQSVRLNTVASNMANADSVSSSVENTYHARRPIFAAQLDQAMSDKQASVGVEV 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           K I   ++  ++E++PGHP+A+  G +  PNVN++ E ADM   +R Y  N+Q    +  
Sbjct: 69  KGIVESEAPLLKEYNPGHPMADKDGFIFKPNVNMVEEMADMTNASRSYQTNVQVADSAKK 128

Query: 124 MMTTTLDL 131
           M+  TL L
Sbjct: 129 MLQQTLQL 136


>gi|238764390|ref|ZP_04625340.1| Flagellar basal-body rod protein flgC [Yersinia kristensenii ATCC
           33638]
 gi|238697416|gb|EEP90183.1| Flagellar basal-body rod protein flgC [Yersinia kristensenii ATCC
           33638]
          Length = 134

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L+ QS RM + + N+ANA + TG  P   PYR K + F+   +    +GGVRV +
Sbjct: 9   IAGSALSAQSQRMNVSASNMANADSVTG--PDGQPYRAKQVVFQVAAQPGQETGGVRVAQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D +     F PG+P+A+A G V+ PNV++  E  +    +R Y AN++ +  +  +M
Sbjct: 67  VIDDPAPDRLVFQPGNPLADAKGYVRMPNVDITGEMVNTISASRSYQANVEVLNTTKSLM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|187918167|ref|YP_001883730.1| flagellar basal body rod protein FlgC [Borrelia hermsii DAH]
 gi|119861015|gb|AAX16810.1| flagellar basal-body rod protein FlgC [Borrelia hermsii DAH]
          Length = 152

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 77/151 (50%), Gaps = 21/151 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L +S + A++GL  Q  R+ +I+ NIAN  TT  + G   YRR+ + F            
Sbjct: 3   LFSSINTASTGLTAQRLRLDVIANNIANVETTRTSEGGS-YRRQRVIFAPRVVSPYWKGP 61

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETAD 103
              +++ +G G GVRV  I  D+S    ++DP HP A  SG     V++PNVN + E  D
Sbjct: 62  FVPDDLDNGVGQGVRVASIEKDKSPLKLKYDPTHPDAIRSGELKGYVEFPNVNAVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           M   +R Y AN   I  S  M  + L +L++
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALSILQN 152


>gi|82777311|ref|YP_403660.1| flagellar basal body rod protein FlgC [Shigella dysenteriae Sd197]
 gi|309788141|ref|ZP_07682747.1| flagellar basal-body rod protein FlgC [Shigella dysenteriae 1617]
 gi|81241459|gb|ABB62169.1| cell-proximal portion of basal-body rod [Shigella dysenteriae
           Sd197]
 gi|308923993|gb|EFP69494.1| flagellar basal-body rod protein FlgC [Shigella dysenteriae 1617]
          Length = 134

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALTAQSQRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVNSAPGAATGGVKVAD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  IIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|123442786|ref|YP_001006763.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|332161320|ref|YP_004297897.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|2494525|sp|Q56894|FLGC_YEREN RecName: Full=Flagellar basal-body rod protein flgC
 gi|793899|emb|CAA88193.1| flgC [Yersinia enterocolitica]
 gi|122089747|emb|CAL12600.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|325665550|gb|ADZ42194.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860608|emb|CBX70905.1| flagellar basal-body rod protein flgC [Yersinia enterocolitica
           W22703]
          Length = 134

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L+ QS R+ + + N+ANA + TG  P   PYR K + F+   +    +GGVRV +
Sbjct: 9   IAGSALSAQSQRLNVSASNMANADSVTG--PDGQPYRAKQVVFQVAAQPGQETGGVRVAQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  +  +M
Sbjct: 67  IIDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|308186391|ref|YP_003930522.1| Flagellar basal-body rod protein flgC [Pantoea vagans C9-1]
 gi|308056901|gb|ADO09073.1| Flagellar basal-body rod protein flgC [Pantoea vagans C9-1]
          Length = 134

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 72/126 (57%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKK 65
           IA S +  QS R+ + + N+ANA + TG  P   PY  K + F+ +   GS  GGV+V +
Sbjct: 9   IAGSAMTAQSQRLNVSASNLANADSVTG--PDGKPYVAKQVVFQTDAAPGSATGGVKVAR 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D +     +DPG+P+A+A G VK PNV+V+ E+ +    +R Y AN++ +     MM
Sbjct: 67  VVDDPTPAKLVYDPGNPMADAKGYVKMPNVDVVSESVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 MKTLTI 132


>gi|254443396|ref|ZP_05056872.1| flagellar basal-body rod protein FlgC [Verrucomicrobiae bacterium
           DG1235]
 gi|198257704|gb|EDY82012.1| flagellar basal-body rod protein FlgC [Verrucomicrobiae bacterium
           DG1235]
          Length = 123

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 12/119 (10%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEV-----------MHGSGGVRVKKIGVDQ 70
           M II +NIANA TT   P   PY+R+T+ FE             M  + GV V+ +  D+
Sbjct: 1   MDIIGQNIANAHTT-RGPDGMPYQRQTVQFEAKLMELGRDQNGKMQTAQGVNVRDVVTDE 59

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           +     F+PGHP A+  G+V+ PNVN+  E  D+   +R Y ANLQ ++ S  M    L
Sbjct: 60  TNGPLVFNPGHPDADEKGMVQLPNVNLTHEMVDLISASRSYEANLQVVRTSKQMAQQAL 118


>gi|163856433|ref|YP_001630731.1| flagellar basal body rod protein FlgC [Bordetella petrii DSM 12804]
 gi|163260161|emb|CAP42463.1| flagellar basal-body rod protein FlgC [Bordetella petrii]
          Length = 139

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-----EVMHGS--GGVR 62
           IA S L  QS RM + + N+ANA  +   P   PYR + + F+        +G   GGVR
Sbjct: 9   IAGSALQAQSQRMNVSASNLANA-DSAVGPDGQPYRARQVVFQVNPPAGQAYGREIGGVR 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V  +  D S     +DP HP+AN  G V  PNV+ + ET +M   +R Y AN++ +  + 
Sbjct: 68  VAGVVQDPSPPKLIYDPSHPLANPQGYVTMPNVDPVAETVNMIAASRSYQANVEVLNTAK 127

Query: 123 DMMTTTLDL 131
            +M  TL L
Sbjct: 128 QLMMKTLTL 136


>gi|254993619|ref|ZP_05275809.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J2-064]
          Length = 136

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)

Query: 10  IANSGLAVQSAR--MQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGSGGV 61
           I  SG A+ +A+  M++ S NIANA ++   PG  P+ RK +       FE  + G+ GV
Sbjct: 5   INTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTGTKGV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   ++ +
Sbjct: 64  KVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVXQKMYAANTSALQAN 123

Query: 122 HDMMTTTLDL 131
             MM   L++
Sbjct: 124 EKMMEKDLEI 133


>gi|116872100|ref|YP_848881.1| flagellar basal body rod protein FlgC [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116740978|emb|CAK20098.1| flagellar basal-body rod protein FlgC [Listeria welshimeri serovar
           6b str. SLCC5334]
          Length = 136

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)

Query: 10  IANSGLAVQSAR--MQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGSGGV 61
           I  SG A+ +A+  M++ S NIANA ++   PG  P+ RK +       FE  + G+ GV
Sbjct: 5   INTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTGTKGV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   ++ +
Sbjct: 64  KVSEISADTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQAN 123

Query: 122 HDMMTTTLDL 131
             MM   L++
Sbjct: 124 EKMMEKDLEI 133


>gi|311030132|ref|ZP_07708222.1| flagellar basal body rod protein FlgC [Bacillus sp. m3-13]
          Length = 150

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 74/146 (50%), Gaps = 18/146 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT-GDTPGS--DPYRRKTI-------SFEE 53
           +  S +I++S L  Q  RM +IS N+AN  +T G+      +PYRRK +       SF+ 
Sbjct: 3   MFKSMNISSSALTAQRLRMDVISSNMANVDSTRGEYRNGQWEPYRRKLVETAPKENSFQS 62

Query: 54  VMHGSGG--------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +  + G        V+V +I  D + F   FDP HP AN  G V+ PNV+ L E  D+ 
Sbjct: 63  YLQKASGNGSGFGSGVKVTRIKEDDAPFRVMFDPEHPDANEDGYVELPNVDPLKEMVDLM 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDL 131
             +R Y AN+     S  +M  TL+L
Sbjct: 123 SASRSYEANVTVFNASKGIMMKTLEL 148


>gi|332296506|ref|YP_004438429.1| flagellar basal-body rod protein FlgC [Thermodesulfobium narugense
           DSM 14796]
 gi|332179609|gb|AEE15298.1| flagellar basal-body rod protein FlgC [Thermodesulfobium narugense
           DSM 14796]
          Length = 134

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---G 60
            + +  IA SGL  Q  +M + + N+ANA +         ++R+ +  +E     G   G
Sbjct: 2   FLRTLEIAGSGLTAQRLKMDVAANNLANAYSNVKDKNGQIFKRQIVELQESTGKDGSFLG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  I  D S     +DPG+P ANA G V+YPNVN + E   +   +R Y A+L  +  
Sbjct: 62  VKVAGIISDNSPPRMVYDPGNPEANADGYVEYPNVNPIREMVSLINASRSYEADLNVVSA 121

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD L+
Sbjct: 122 TKSMIGQTLDELK 134


>gi|322832562|ref|YP_004212589.1| flagellar basal-body rod protein FlgC [Rahnella sp. Y9602]
 gi|321167763|gb|ADW73462.1| flagellar basal-body rod protein FlgC [Rahnella sp. Y9602]
          Length = 134

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHG--SGGVRVKK 65
           IA S LA QS R+ + + N+ANA + TG  P   PY+ K + F+ +   G  +GGV+V +
Sbjct: 9   IAGSALAAQSQRLNVSASNMANADSVTG--PDGKPYKAKQVVFQVDAAPGQETGGVKVAQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D +     ++PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  +  +M
Sbjct: 67  VVDDPAPMRMVYEPGNPMADAKGYVQMPNVDVVSEMVNTISASRSYQANVEVLNTTKSLM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 MKTLTL 132


>gi|238785499|ref|ZP_04629482.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
 gi|238799105|ref|ZP_04642561.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
 gi|238713601|gb|EEQ05630.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
 gi|238717052|gb|EEQ08912.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
          Length = 134

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L+ QS R+ + + N+ANA + TG  P   PYR K + F+   +    +GGVRV +
Sbjct: 9   IAGSALSAQSQRLNVSASNMANADSVTG--PDGQPYRAKQVVFQVAAQPGQETGGVRVSQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  +  +M
Sbjct: 67  VVDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|323165582|gb|EFZ51369.1| flagellar basal-body rod protein FlgC [Shigella sonnei 53G]
          Length = 134

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALTAQSQRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVNAAPGAATGGVKVAD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNMVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|300716216|ref|YP_003741019.1| cell-proximal portion of basal-body rod [Erwinia billingiae Eb661]
 gi|299062052|emb|CAX59168.1| Cell-proximal portion of basal-body rod [Erwinia billingiae Eb661]
          Length = 134

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKK 65
           IA S +  QS R+ + + N+ANA + TG  P   PY  K + F+ + + GS  GGVRV +
Sbjct: 9   IAGSAMNAQSQRLNVSASNLANADSVTG--PDGQPYVAKQVVFQTDAVPGSPTGGVRVAQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D +     ++PG+P+A+A G VK PNV+V+ ET +    +R Y AN++ +     MM
Sbjct: 67  VVDDPTPAKLVYEPGNPMADAKGYVKMPNVDVVGETVNTMSASRSYQANVEVLNTVKQMM 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 MKTLTM 132


>gi|297538894|ref|YP_003674663.1| flagellar basal-body rod protein FlgC [Methylotenera sp. 301]
 gi|297258241|gb|ADI30086.1| flagellar basal-body rod protein FlgC [Methylotenera sp. 301]
          Length = 135

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKK 65
           +I+ S ++ Q+ R+  ++ N+ANA +     G+ PY+ K + F     GS    GV+V K
Sbjct: 8   NISGSAMSAQAQRLNTVASNLANADSATSANGT-PYKAKQVVFSATPTGSPDASGVKVLK 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D S     +DP HP+AN  G V  PNVNV  E  +M   +R Y  N++T+  +  M+
Sbjct: 67  VIEDNSPAKVVYDPKHPLANDKGYVTMPNVNVTEEMVNMISASRAYQNNVETMNAAKTML 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 LKTLTI 132


>gi|227112519|ref|ZP_03826175.1| flagellar basal body rod protein FlgC [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
 gi|227328336|ref|ZP_03832360.1| flagellar basal body rod protein FlgC [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 134

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 6/127 (4%)

Query: 9   HIANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVK 64
            I+ S L+ QS R+ + + N+ANA + TG  P  +PYR K + FE        +GGVRV 
Sbjct: 8   EISGSALSAQSQRLNVSASNLANADSVTG--PDGEPYRAKQVVFEVNAAPGQSTGGVRVS 65

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D S     ++PG+P+A+  G V+ PNV+ + E  +    +R Y AN++ +  +  M
Sbjct: 66  NVIEDPSPARLVYEPGNPLADGQGYVRMPNVDPVAEMVNTISASRSYQANVEVLNTTKSM 125

Query: 125 MTTTLDL 131
           M  TL +
Sbjct: 126 MLKTLTI 132


>gi|170682563|ref|YP_001744106.1| flagellar basal body rod protein FlgC [Escherichia coli SMS-3-5]
 gi|170520281|gb|ACB18459.1| flagellar basal-body rod protein FlgC [Escherichia coli SMS-3-5]
          Length = 134

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALTAQSQRLNVAASNLANADSLTG--PDGQPYRAKQVVFQVNAAPGAATGGVKVAD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|15801191|ref|NP_287208.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           EDL933]
 gi|15830706|ref|NP_309479.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. Sakai]
 gi|16129037|ref|NP_415592.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|26247214|ref|NP_753254.1| flagellar basal body rod protein FlgC [Escherichia coli CFT073]
 gi|74311636|ref|YP_310055.1| flagellar basal body rod protein FlgC [Shigella sonnei Ss046]
 gi|82544460|ref|YP_408407.1| flagellar basal body rod protein FlgC [Shigella boydii Sb227]
 gi|89107920|ref|AP_001700.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. W3110]
 gi|91210226|ref|YP_540212.1| flagellar basal body rod protein FlgC [Escherichia coli UTI89]
 gi|110641250|ref|YP_668980.1| flagellar basal body rod protein FlgC [Escherichia coli 536]
 gi|117623260|ref|YP_852173.1| flagellar basal body rod protein FlgC [Escherichia coli APEC O1]
 gi|157158527|ref|YP_001462308.1| flagellar basal body rod protein FlgC [Escherichia coli E24377A]
 gi|157160601|ref|YP_001457919.1| flagellar basal body rod protein FlgC [Escherichia coli HS]
 gi|168747150|ref|ZP_02772172.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4113]
 gi|168758634|ref|ZP_02783641.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4401]
 gi|168764486|ref|ZP_02789493.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4501]
 gi|168767733|ref|ZP_02792740.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4486]
 gi|168773919|ref|ZP_02798926.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4196]
 gi|168783604|ref|ZP_02808611.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4076]
 gi|168790009|ref|ZP_02815016.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC869]
 gi|168802019|ref|ZP_02827026.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC508]
 gi|170020530|ref|YP_001725484.1| flagellar basal body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|170080725|ref|YP_001730045.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187733039|ref|YP_001880754.1| flagellar basal body rod protein FlgC [Shigella boydii CDC 3083-94]
 gi|188493209|ref|ZP_03000479.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|191168455|ref|ZP_03030243.1| flagellar basal-body rod protein FlgC [Escherichia coli B7A]
 gi|191172415|ref|ZP_03033956.1| flagellar basal-body rod protein FlgC [Escherichia coli F11]
 gi|193064524|ref|ZP_03045604.1| flagellar basal-body rod protein FlgC [Escherichia coli E22]
 gi|194428485|ref|ZP_03061025.1| flagellar basal-body rod protein FlgC [Escherichia coli B171]
 gi|194437997|ref|ZP_03070090.1| flagellar basal-body rod protein FlgC [Escherichia coli 101-1]
 gi|195935464|ref|ZP_03080846.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. EC4024]
 gi|208806183|ref|ZP_03248520.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4206]
 gi|208816163|ref|ZP_03257342.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4045]
 gi|208822529|ref|ZP_03262848.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4042]
 gi|209400948|ref|YP_002269920.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4115]
 gi|209918328|ref|YP_002292412.1| flagellar basal body rod protein FlgC [Escherichia coli SE11]
 gi|215486283|ref|YP_002328714.1| flagellar basal body rod protein FlgC [Escherichia coli O127:H6
           str. E2348/69]
 gi|217328457|ref|ZP_03444539.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. TW14588]
 gi|218553653|ref|YP_002386566.1| flagellar basal body rod protein FlgC [Escherichia coli IAI1]
 gi|218557956|ref|YP_002390869.1| flagellar basal body rod protein FlgC [Escherichia coli S88]
 gi|218689027|ref|YP_002397239.1| flagellar basal body rod protein FlgC [Escherichia coli ED1a]
 gi|218694608|ref|YP_002402275.1| flagellar basal body rod protein FlgC [Escherichia coli 55989]
 gi|218700423|ref|YP_002408052.1| flagellar basal body rod protein FlgC [Escherichia coli IAI39]
 gi|218704482|ref|YP_002412001.1| flagellar basal body rod protein FlgC [Escherichia coli UMN026]
 gi|227886568|ref|ZP_04004373.1| flagellar basal body rod protein FlgC [Escherichia coli 83972]
 gi|237706940|ref|ZP_04537421.1| flagellar rod protein FlgC [Escherichia sp. 3_2_53FAA]
 gi|238900328|ref|YP_002926124.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|253773902|ref|YP_003036733.1| flagellar basal body rod protein FlgC [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161180|ref|YP_003044288.1| flagellar basal body rod protein FlgC [Escherichia coli B str.
           REL606]
 gi|254792456|ref|YP_003077293.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. TW14359]
 gi|256018669|ref|ZP_05432534.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
 gi|256023228|ref|ZP_05437093.1| flagellar basal body rod protein FlgC [Escherichia sp. 4_1_40B]
 gi|260843314|ref|YP_003221092.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|260854557|ref|YP_003228448.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|260867437|ref|YP_003233839.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|261227021|ref|ZP_05941302.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256255|ref|ZP_05948788.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282094|ref|YP_003498912.1| Cell-proximal portion of basal-body rod [Escherichia coli O55:H7
           str. CB9615]
 gi|293404358|ref|ZP_06648352.1| flgC [Escherichia coli FVEC1412]
 gi|293414369|ref|ZP_06657018.1| flagellar basal-body rod protein FlgC [Escherichia coli B185]
 gi|293433364|ref|ZP_06661792.1| flagellar basal-body rod protein FlgC [Escherichia coli B088]
 gi|298380138|ref|ZP_06989743.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|300816776|ref|ZP_07096996.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|300821145|ref|ZP_07101294.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 119-7]
 gi|300899593|ref|ZP_07117832.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
 gi|300902465|ref|ZP_07120447.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 84-1]
 gi|300918676|ref|ZP_07135257.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 115-1]
 gi|300922600|ref|ZP_07138700.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 182-1]
 gi|300928374|ref|ZP_07143908.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 187-1]
 gi|300938639|ref|ZP_07153368.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
 gi|300950169|ref|ZP_07164114.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 116-1]
 gi|300954386|ref|ZP_07166840.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 175-1]
 gi|300974378|ref|ZP_07172590.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 45-1]
 gi|300982623|ref|ZP_07176207.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 200-1]
 gi|301023261|ref|ZP_07187058.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 69-1]
 gi|301029711|ref|ZP_07192765.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 196-1]
 gi|301051142|ref|ZP_07197972.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 185-1]
 gi|301304987|ref|ZP_07211089.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 124-1]
 gi|301328556|ref|ZP_07221617.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 78-1]
 gi|301644986|ref|ZP_07244952.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|306814077|ref|ZP_07448250.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
 gi|307137709|ref|ZP_07497065.1| flagellar basal body rod protein FlgC [Escherichia coli H736]
 gi|309798068|ref|ZP_07692443.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 145-7]
 gi|312968852|ref|ZP_07783059.1| flagellar basal-body rod protein FlgC [Escherichia coli 2362-75]
 gi|312971211|ref|ZP_07785389.1| flagellar basal-body rod protein FlgC [Escherichia coli 1827-70]
 gi|331641618|ref|ZP_08342753.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
 gi|331646332|ref|ZP_08347435.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331652127|ref|ZP_08353146.1| flagellar basal-body rod protein FlgC [Escherichia coli M718]
 gi|331657136|ref|ZP_08358098.1| flagellar basal-body rod protein FlgC [Escherichia coli TA206]
 gi|331662480|ref|ZP_08363403.1| flagellar basal-body rod protein FlgC [Escherichia coli TA143]
 gi|331667474|ref|ZP_08368338.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331672594|ref|ZP_08373383.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
 gi|331676865|ref|ZP_08377561.1| flagellar basal-body rod protein FlgC [Escherichia coli H591]
 gi|331682576|ref|ZP_08383195.1| flagellar basal-body rod protein FlgC [Escherichia coli H299]
 gi|332279738|ref|ZP_08392151.1| flagellar rod protein FlgC [Shigella sp. D9]
 gi|78100011|sp|P0ABX4|FLGC_ECO57 RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|78100012|sp|P0ABX3|FLGC_ECOL6 RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|78100013|sp|P0ABX2|FLGC_ECOLI RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|12514612|gb|AAG55820.1|AE005317_9 flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. EDL933]
 gi|26107615|gb|AAN79814.1|AE016759_88 Flagellar basal-body rod protein flgC [Escherichia coli CFT073]
 gi|1787314|gb|AAC74158.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062651|dbj|BAA35882.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K12 substr. W3110]
 gi|13360916|dbj|BAB34875.1| flagellar rod protein FlgC [Escherichia coli O157:H7 str. Sakai]
 gi|73855113|gb|AAZ87820.1| flagellar protein for cell-proximal portion of basal-body rod
           [Shigella sonnei Ss046]
 gi|81245871|gb|ABB66579.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
 gi|91071800|gb|ABE06681.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Escherichia coli UTI89]
 gi|110342842|gb|ABG69079.1| flagellar basal-body rod protein FlgC [Escherichia coli 536]
 gi|115512384|gb|ABJ00459.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli APEC O1]
 gi|157066281|gb|ABV05536.1| flagellar basal-body rod protein FlgC [Escherichia coli HS]
 gi|157080557|gb|ABV20265.1| flagellar basal-body rod protein FlgC [Escherichia coli E24377A]
 gi|169755458|gb|ACA78157.1| flagellar basal-body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|169888560|gb|ACB02267.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187430031|gb|ACD09305.1| flagellar basal-body rod protein FlgC [Shigella boydii CDC 3083-94]
 gi|187770492|gb|EDU34336.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4196]
 gi|188017999|gb|EDU56121.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4113]
 gi|188488408|gb|EDU63511.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|188999102|gb|EDU68088.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4076]
 gi|189354569|gb|EDU72988.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4401]
 gi|189363308|gb|EDU81727.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4486]
 gi|189365512|gb|EDU83928.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4501]
 gi|189370511|gb|EDU88927.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC869]
 gi|189375937|gb|EDU94353.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC508]
 gi|190901474|gb|EDV61235.1| flagellar basal-body rod protein FlgC [Escherichia coli B7A]
 gi|190907299|gb|EDV66897.1| flagellar basal-body rod protein FlgC [Escherichia coli F11]
 gi|192927776|gb|EDV82390.1| flagellar basal-body rod protein FlgC [Escherichia coli E22]
 gi|194413537|gb|EDX29819.1| flagellar basal-body rod protein FlgC [Escherichia coli B171]
 gi|194422933|gb|EDX38927.1| flagellar basal-body rod protein FlgC [Escherichia coli 101-1]
 gi|208725984|gb|EDZ75585.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4206]
 gi|208732811|gb|EDZ81499.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4045]
 gi|208738014|gb|EDZ85697.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4042]
 gi|209162348|gb|ACI39781.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4115]
 gi|209773398|gb|ACI85011.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773400|gb|ACI85012.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773402|gb|ACI85013.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773404|gb|ACI85014.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773406|gb|ACI85015.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209911587|dbj|BAG76661.1| flagellar basal-body rod protein FlgC [Escherichia coli SE11]
 gi|215264355|emb|CAS08712.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217318884|gb|EEC27310.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. TW14588]
 gi|218351340|emb|CAU97046.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli 55989]
 gi|218360421|emb|CAQ97973.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI1]
 gi|218364725|emb|CAR02415.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli S88]
 gi|218370409|emb|CAR18216.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI39]
 gi|218426591|emb|CAR07419.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli ED1a]
 gi|218431579|emb|CAR12458.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli UMN026]
 gi|222032827|emb|CAP75566.1| flagellar basal-body rod protein flgC [Escherichia coli LF82]
 gi|226898150|gb|EEH84409.1| flagellar rod protein FlgC [Escherichia sp. 3_2_53FAA]
 gi|227836772|gb|EEJ47238.1| flagellar basal body rod protein FlgC [Escherichia coli 83972]
 gi|238861102|gb|ACR63100.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|242376878|emb|CAQ31595.1| flagellar basal-body rod protein FlgC, subunit of Flagellar Motor
           Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324946|gb|ACT29548.1| flagellar basal-body rod protein FlgC [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973081|gb|ACT38752.1| flagellar basal-body rod protein C [Escherichia coli B str. REL606]
 gi|253977295|gb|ACT42965.1| flagellar basal-body rod protein C [Escherichia coli BL21(DE3)]
 gi|254591856|gb|ACT71217.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. TW14359]
 gi|257753206|dbj|BAI24708.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|257758461|dbj|BAI29958.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|257763793|dbj|BAI35288.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|260449786|gb|ACX40208.1| flagellar basal-body rod protein FlgC [Escherichia coli DH1]
 gi|281178183|dbj|BAI54513.1| flagellar basal-body rod protein FlgC [Escherichia coli SE15]
 gi|284920897|emb|CBG33960.1| flagellar basal-body rod protein FlgC [Escherichia coli 042]
 gi|290761967|gb|ADD55928.1| Cell-proximal portion of basal-body rod [Escherichia coli O55:H7
           str. CB9615]
 gi|291324183|gb|EFE63605.1| flagellar basal-body rod protein FlgC [Escherichia coli B088]
 gi|291428944|gb|EFF01969.1| flgC [Escherichia coli FVEC1412]
 gi|291434427|gb|EFF07400.1| flagellar basal-body rod protein FlgC [Escherichia coli B185]
 gi|294493232|gb|ADE91988.1| flagellar basal-body rod protein FlgC [Escherichia coli IHE3034]
 gi|298279836|gb|EFI21344.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|299877399|gb|EFI85610.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 196-1]
 gi|300297163|gb|EFJ53548.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 185-1]
 gi|300307088|gb|EFJ61608.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 200-1]
 gi|300318622|gb|EFJ68406.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 175-1]
 gi|300356864|gb|EFJ72734.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
 gi|300397106|gb|EFJ80644.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 69-1]
 gi|300405497|gb|EFJ89035.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 84-1]
 gi|300410621|gb|EFJ94159.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 45-1]
 gi|300414170|gb|EFJ97480.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 115-1]
 gi|300421077|gb|EFK04388.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 182-1]
 gi|300450516|gb|EFK14136.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 116-1]
 gi|300456424|gb|EFK19917.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
 gi|300463632|gb|EFK27125.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 187-1]
 gi|300526444|gb|EFK47513.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 119-7]
 gi|300530550|gb|EFK51612.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|300839705|gb|EFK67465.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 124-1]
 gi|300844948|gb|EFK72708.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 78-1]
 gi|301076715|gb|EFK91521.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|305852714|gb|EFM53162.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
 gi|307553076|gb|ADN45851.1| flagellar basal-body rod protein FlgC [Escherichia coli ABU 83972]
 gi|307627456|gb|ADN71760.1| flagellar basal body rod protein FlgC [Escherichia coli UM146]
 gi|308118351|gb|EFO55613.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 145-7]
 gi|309701346|emb|CBJ00647.1| flagellar basal-body rod protein FlgC [Escherichia coli ETEC
           H10407]
 gi|310336413|gb|EFQ01599.1| flagellar basal-body rod protein FlgC [Escherichia coli 1827-70]
 gi|312286254|gb|EFR14167.1| flagellar basal-body rod protein FlgC [Escherichia coli 2362-75]
 gi|312945636|gb|ADR26463.1| flagellar basal body rod protein FlgC [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|315135706|dbj|BAJ42865.1| cell-proximal portion of basal-body rod [Escherichia coli DH1]
 gi|315253875|gb|EFU33843.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 85-1]
 gi|315287371|gb|EFU46782.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 110-3]
 gi|315291068|gb|EFU50431.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 153-1]
 gi|315296705|gb|EFU56000.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 16-3]
 gi|315618244|gb|EFU98834.1| flagellar basal-body rod protein FlgC [Escherichia coli 3431]
 gi|320179226|gb|EFW54184.1| Flagellar basal-body rod protein FlgC [Shigella boydii ATCC 9905]
 gi|320186979|gb|EFW61692.1| Flagellar basal-body rod protein FlgC [Shigella flexneri CDC
           796-83]
 gi|320189757|gb|EFW64413.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC1212]
 gi|320196444|gb|EFW71067.1| Flagellar basal-body rod protein FlgC [Escherichia coli WV_060327]
 gi|320637525|gb|EFX07325.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. G5101]
 gi|320643086|gb|EFX12287.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H-
           str. 493-89]
 gi|320648544|gb|EFX17199.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H-
           str. H 2687]
 gi|320653858|gb|EFX21932.1| flagellar basal body rod protein FlgC [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659338|gb|EFX26907.1| flagellar basal body rod protein FlgC [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320664473|gb|EFX31624.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. LSU-61]
 gi|323156881|gb|EFZ43015.1| flagellar basal-body rod protein FlgC [Escherichia coli EPECa14]
 gi|323163756|gb|EFZ49575.1| flagellar basal-body rod protein FlgC [Escherichia coli E128010]
 gi|323174797|gb|EFZ60412.1| flagellar basal-body rod protein FlgC [Escherichia coli LT-68]
 gi|323175695|gb|EFZ61289.1| flagellar basal-body rod protein FlgC [Escherichia coli 1180]
 gi|323185803|gb|EFZ71164.1| flagellar basal-body rod protein FlgC [Escherichia coli 1357]
 gi|323190586|gb|EFZ75858.1| flagellar basal-body rod protein FlgC [Escherichia coli RN587/1]
 gi|323937814|gb|EGB34078.1| flagellar basal-body rod protein FlgC [Escherichia coli E1520]
 gi|323942543|gb|EGB38710.1| flagellar basal-body rod protein FlgC [Escherichia coli E482]
 gi|323947624|gb|EGB43628.1| flagellar basal-body rod protein FlgC [Escherichia coli H120]
 gi|323953240|gb|EGB49106.1| flagellar basal-body rod protein FlgC [Escherichia coli H252]
 gi|323957898|gb|EGB53610.1| flagellar basal-body rod protein FlgC [Escherichia coli H263]
 gi|323962673|gb|EGB58251.1| flagellar basal-body rod protein FlgC [Escherichia coli H489]
 gi|323967015|gb|EGB62441.1| flagellar basal-body rod protein FlgC [Escherichia coli M863]
 gi|323973337|gb|EGB68526.1| flagellar basal-body rod protein FlgC [Escherichia coli TA007]
 gi|323976553|gb|EGB71641.1| flagellar basal-body rod protein FlgC [Escherichia coli TW10509]
 gi|324007914|gb|EGB77133.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 57-2]
 gi|324013348|gb|EGB82567.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 60-1]
 gi|324017422|gb|EGB86641.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 117-3]
 gi|324117355|gb|EGC11262.1| flagellar basal-body rod protein FlgC [Escherichia coli E1167]
 gi|326339296|gb|EGD63110.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. 1125]
 gi|326344743|gb|EGD68491.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. 1044]
 gi|327253473|gb|EGE65111.1| flagellar basal-body rod protein FlgC [Escherichia coli STEC_7v]
 gi|330910888|gb|EGH39398.1| flagellar basal-body rod protein FlgC [Escherichia coli AA86]
 gi|331038416|gb|EGI10636.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
 gi|331045084|gb|EGI17211.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331050405|gb|EGI22463.1| flagellar basal-body rod protein FlgC [Escherichia coli M718]
 gi|331055384|gb|EGI27393.1| flagellar basal-body rod protein FlgC [Escherichia coli TA206]
 gi|331060902|gb|EGI32866.1| flagellar basal-body rod protein FlgC [Escherichia coli TA143]
 gi|331065059|gb|EGI36954.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331070237|gb|EGI41603.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
 gi|331075554|gb|EGI46852.1| flagellar basal-body rod protein FlgC [Escherichia coli H591]
 gi|331080207|gb|EGI51386.1| flagellar basal-body rod protein FlgC [Escherichia coli H299]
 gi|332094031|gb|EGI99083.1| flagellar basal-body rod protein FlgC [Shigella boydii 3594-74]
 gi|332102090|gb|EGJ05436.1| flagellar rod protein FlgC [Shigella sp. D9]
 gi|332342620|gb|AEE55954.1| flagellar basal-body rod protein FlgC [Escherichia coli UMNK88]
          Length = 134

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALTAQSQRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVNAAPGAATGGVKVAD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|317052365|ref|YP_004113481.1| flagellar basal-body rod protein FlgC [Desulfurispirillum indicum
           S5]
 gi|316947449|gb|ADU66925.1| flagellar basal-body rod protein FlgC [Desulfurispirillum indicum
           S5]
          Length = 151

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 69/143 (48%), Gaps = 20/143 (13%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------------------SF 51
           I++S L  Q  RM +IS N+ANA TT    G+  Y+RK +                  SF
Sbjct: 9   ISSSALFAQRQRMNVISSNLANAHTTRAEDGT-YYKRKDLVFKPQTIHDDVRGKIFPASF 67

Query: 52  EEVMHGS-GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
           EE       GVRV+ I  D    + ++DP HP A+  G V YPN+NV+ E  DM   +R 
Sbjct: 68  EEAWKKKIEGVRVEAIIEDDEPPILKYDPSHPDADEEGYVAYPNINVVEEMTDMITASRS 127

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y AN+  I+    M    L L R
Sbjct: 128 YEANITMIETIKKMANEALGLGR 150


>gi|261419417|ref|YP_003253099.1| flagellar basal body rod protein FlgC [Geobacillus sp. Y412MC61]
 gi|319766232|ref|YP_004131733.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC52]
 gi|261375874|gb|ACX78617.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC61]
 gi|317111098|gb|ADU93590.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC52]
          Length = 150

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 24/149 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTI-------S 50
           L  S +I+ S L  Q  RM +I+ NIAN  TT      G+    +PYRRK +       S
Sbjct: 3   LFQSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEW---EPYRRKMVIIEPQSGS 59

Query: 51  FEEVMHGS--------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           F   +  +        GGV+V++I  D + F   +DP HP A A G V+ PNV+ L E  
Sbjct: 60  FSGYLQAALGRADAVDGGVQVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEMV 119

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           D+    R Y AN+  +  S  M+   L++
Sbjct: 120 DLIGATRSYEANVTVLNASKGMLMKALEI 148


>gi|294635608|ref|ZP_06714085.1| flagellar basal-body rod protein FlgC [Edwardsiella tarda ATCC
           23685]
 gi|291091060|gb|EFE23621.1| flagellar basal-body rod protein FlgC [Edwardsiella tarda ATCC
           23685]
          Length = 134

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 8/133 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVMHGSG--- 59
           L++   I+ S L  QS RM + + N+ANA + TG  P  +PYR K + F+ V  G+G   
Sbjct: 3   LLSIFDISGSALTAQSKRMNVAASNLANADSVTG--PDGEPYRAKQVVFQ-VKPGAGEEI 59

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV+V ++  D S     + PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +
Sbjct: 60  GGVQVSQVVDDPSPDRLVYQPGNPLADAKGYVRMPNVDVVGEMVNSIAASRSYQANVEVL 119

Query: 119 KQSHDMMTTTLDL 131
             +  +M  TL L
Sbjct: 120 NTTKSLMMKTLTL 132


>gi|229166585|ref|ZP_04294337.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH621]
 gi|228616839|gb|EEK73912.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH621]
          Length = 137

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHG--SGGVRVK 64
           SGL      M++ S NI N  TTG  PG++PY R+++      SF  ++ G  + GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNVNTTG-APGAEPYHRRSVVLESNNSFASMLDGAPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  ++P HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIETDRNENLV-YEPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|82702451|ref|YP_412017.1| flagellar basal-body rod protein FlgC [Nitrosospira multiformis
           ATCC 25196]
 gi|82410516|gb|ABB74625.1| flagellar basal-body rod protein FlgC [Nitrosospira multiformis
           ATCC 25196]
          Length = 139

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 9/130 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE--------VMHGSGGV 61
           +A S +  Q+ R+ +++ N+ANA +   + G  PY+ K + F          + +G+ GV
Sbjct: 9   VAGSAMTAQNQRLNVVASNLANADSAASSNG-QPYKAKQVVFMSTSPLGDNGISNGTHGV 67

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           RV  +  DQS     ++P HP+AN  G V  PNVNV+ E  DM   +R Y  N+  +  +
Sbjct: 68  RVSGVIEDQSPMKMVYEPSHPMANPEGFVTMPNVNVVEEMVDMISASRSYQNNVDMMNTA 127

Query: 122 HDMMTTTLDL 131
             ++  TL +
Sbjct: 128 KTLLLKTLTI 137


>gi|253688974|ref|YP_003018164.1| flagellar basal-body rod protein FlgC [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755552|gb|ACT13628.1| flagellar basal-body rod protein FlgC [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 134

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 6/127 (4%)

Query: 9   HIANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVK 64
            I+ S L+ QS R+ + + N+ANA + TG  P  +PYR K + FE        +GGVRV 
Sbjct: 8   EISGSALSAQSQRLNVSASNLANADSVTG--PDGEPYRAKQVVFEVNAAPGQSTGGVRVA 65

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D S     ++PG+P+A+  G V+ PNV+ + E  +    +R Y AN++ +  +  M
Sbjct: 66  NVIEDPSPARLVYEPGNPLADGQGYVRMPNVDPVAEMVNTISASRSYQANVEVLNTTKSM 125

Query: 125 MTTTLDL 131
           M  TL +
Sbjct: 126 MLKTLTI 132


>gi|218230982|ref|YP_002366429.1| flagellar basal body rod protein FlgC [Bacillus cereus B4264]
 gi|218158939|gb|ACK58931.1| flagellar basal-body rod protein FlgC [Bacillus cereus B4264]
          Length = 137

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHG--SGGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++ G  + GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDGAPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANKEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|300311350|ref|YP_003775442.1| flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1]
 gi|300074135|gb|ADJ63534.1| Flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1]
          Length = 134

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKK 65
           ++A S ++ QS R+   + NIANA +   +P   PY+ K + F+ +  G     GV+V  
Sbjct: 8   NVAGSAMSAQSQRLNATASNIANADS-ATSPDGTPYKAKQVVFQAIPVGGVKDSGVKVAA 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  DQ+     +DP HP+A+ +G V  PNVN + E  +M   +R Y  N++T+  +  M+
Sbjct: 67  VVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETMNTAKAML 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 VKTLTI 132


>gi|261821151|ref|YP_003259257.1| flagellar basal body rod protein FlgC [Pectobacterium wasabiae
           WPP163]
 gi|261605164|gb|ACX87650.1| flagellar basal-body rod protein FlgC [Pectobacterium wasabiae
           WPP163]
          Length = 134

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 6/127 (4%)

Query: 9   HIANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVK 64
            I+ S L+ QS R+ + + N+ANA + TG  P  +PYR K + FE        +GGVRV 
Sbjct: 8   EISGSALSAQSQRLNVSASNLANADSVTG--PDGEPYRAKQVVFEVNAAPGQSTGGVRVA 65

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D S     ++PG+P+A+  G V+ PNV+ + E  +    +R Y AN++ +  +  M
Sbjct: 66  NVIEDPSPARLVYEPGNPLADGQGYVRMPNVDPVAEMVNTISASRSYQANVEVLNTTKSM 125

Query: 125 MTTTLDL 131
           M  TL +
Sbjct: 126 MMKTLTI 132


>gi|313624695|gb|EFR94652.1| flagellar basal-body rod protein FlgC [Listeria innocua FSL J1-023]
          Length = 136

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)

Query: 10  IANSGLAVQSAR--MQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGSGGV 61
           I  SG A+ +A+  M++ S NIANA ++   PG  P+ RK +       FE  + G+ GV
Sbjct: 5   INTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTGTXGV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   ++ +
Sbjct: 64  KVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQAN 123

Query: 122 HDMMTTTLDL 131
             MM   L++
Sbjct: 124 EKMMEKDLEI 133


>gi|229043498|ref|ZP_04191208.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH676]
 gi|229144356|ref|ZP_04272762.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST24]
 gi|296502344|ref|YP_003664044.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           BMB171]
 gi|228639143|gb|EEK95567.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST24]
 gi|228725876|gb|EEL77123.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH676]
 gi|296323396|gb|ADH06324.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           BMB171]
          Length = 137

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHG--SGGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++ G  + GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGTDLYERRSVVLESNNSFASMLDGAPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|237753202|ref|ZP_04583682.1| flagellar basal-body rod protein flgc proximal rod protein
           [Helicobacter winghamensis ATCC BAA-430]
 gi|229375469|gb|EEO25560.1| flagellar basal-body rod protein flgc proximal rod protein
           [Helicobacter winghamensis ATCC BAA-430]
          Length = 166

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 36/165 (21%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R+ +IS NIANA TT    G  PYRR     K   F++V++  
Sbjct: 2   FLSSFDISGYGLSAQRQRVNLISSNIANANTTRTDEGG-PYRRRELVLKAFDFDKVLNQK 60

Query: 59  G------------------------------GVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V KI  D +    +++P HP AN+ G
Sbjct: 61  YEKSNNLLEYEDPLNEMDSFDEQRKPKPALMSVYVDKIVRDDTQPRMKYEPSHPDANSEG 120

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N +VE AD+ E ++ Y AN+   + + +M +T + + +
Sbjct: 121 YVAYPNINPVVEMADLIEASKAYQANVAVFQSAKNMASTAISMFQ 165


>gi|75761144|ref|ZP_00741136.1| Flagellar basal-body rod protein flgC [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|206970905|ref|ZP_03231857.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH1134]
 gi|218896677|ref|YP_002445088.1| flagellar basal-body rod protein FlgC [Bacillus cereus G9842]
 gi|228900326|ref|ZP_04064556.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           4222]
 gi|228920455|ref|ZP_04083800.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228952124|ref|ZP_04114219.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228958024|ref|ZP_04119760.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229069296|ref|ZP_04202586.1| Flagellar basal-body rod protein FlgC [Bacillus cereus F65185]
 gi|229078926|ref|ZP_04211478.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock4-2]
 gi|229109201|ref|ZP_04238800.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-15]
 gi|229127070|ref|ZP_04256069.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-Cer4]
 gi|229149946|ref|ZP_04278174.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1550]
 gi|229178153|ref|ZP_04305524.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 172560W]
 gi|229189841|ref|ZP_04316852.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10876]
 gi|74491372|gb|EAO54596.1| Flagellar basal-body rod protein flgC [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|206734541|gb|EDZ51711.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH1134]
 gi|218541427|gb|ACK93821.1| flagellar basal-body rod protein FlgC [Bacillus cereus G9842]
 gi|228593649|gb|EEK51457.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10876]
 gi|228605283|gb|EEK62733.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 172560W]
 gi|228633627|gb|EEK90228.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1550]
 gi|228656423|gb|EEL12262.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-Cer4]
 gi|228674211|gb|EEL29456.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-15]
 gi|228704340|gb|EEL56774.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock4-2]
 gi|228713783|gb|EEL65668.1| Flagellar basal-body rod protein FlgC [Bacillus cereus F65185]
 gi|228801649|gb|EEM48530.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228807656|gb|EEM54180.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228839085|gb|EEM84381.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228859361|gb|EEN03791.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           4222]
          Length = 137

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHG--SGGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++ G  + GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDGAPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|251789166|ref|YP_003003887.1| flagellar basal body rod protein FlgC [Dickeya zeae Ech1591]
 gi|271500064|ref|YP_003333089.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech586]
 gi|307131611|ref|YP_003883627.1| flagellar basal-body rod protein flgC [Dickeya dadantii 3937]
 gi|247537787|gb|ACT06408.1| flagellar basal-body rod protein FlgC [Dickeya zeae Ech1591]
 gi|270343619|gb|ACZ76384.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech586]
 gi|306529140|gb|ADM99070.1| Flagellar basal-body rod protein flgC [Dickeya dadantii 3937]
          Length = 134

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           I+ S L+ QS R+ + + N+ANA + TG  P   PYR K + FE        +GGV+V K
Sbjct: 9   ISGSALSAQSQRLNVSASNLANADSVTG--PDGQPYRAKQVVFEVDAAPGQATGGVKVAK 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D S     + PG+P+A+A G V+ PNV+ + E  +    +R Y AN++ +  +  MM
Sbjct: 67  VVEDPSPEKLVYQPGNPLADAKGYVRMPNVDPVNEMVNTISASRSYQANVEVLNTTKSMM 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 LKTLTI 132


>gi|229096230|ref|ZP_04227203.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-29]
 gi|229102343|ref|ZP_04233051.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-28]
 gi|229115185|ref|ZP_04244595.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-3]
 gi|228668325|gb|EEL23757.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-3]
 gi|228680990|gb|EEL35159.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-28]
 gi|228687190|gb|EEL41095.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-29]
          Length = 137

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHG--SGGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++ G  + GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDGAPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|239826611|ref|YP_002949235.1| flagellar basal body rod protein FlgC [Geobacillus sp. WCH70]
 gi|239806904|gb|ACS23969.1| flagellar basal-body rod protein FlgC [Geobacillus sp. WCH70]
          Length = 150

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 18/146 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG--- 57
           +  S  I  S L  Q  RM +IS N+AN  TT         +PYRRK +  E    G   
Sbjct: 3   IFQSLDITASALTAQRLRMDVISSNMANVDTTHARLVNGQWEPYRRKFVVMEPRQEGFST 62

Query: 58  ------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GVRV KI  DQ+ F   +DP HP A+ +G V+ PNV+ L E  D+ 
Sbjct: 63  YLQAAMNSRSSVGNGVRVTKIMEDQTPFKLVYDPSHPDADPNGYVRLPNVDPLKEMVDLM 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDL 131
              R Y AN+     +  M+   L++
Sbjct: 123 SATRSYEANVTVFNATKGMLMKALEI 148


>gi|212639569|ref|YP_002316089.1| flagellar basal body rod protein FlgC [Anoxybacillus flavithermus
           WK1]
 gi|212561049|gb|ACJ34104.1| Flagellar basal body rod protein FlgC [Anoxybacillus flavithermus
           WK1]
          Length = 145

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 15/143 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTI------SFEEV 54
           +  S +++ S L  Q  RM +IS N+AN  TT          PYRRK +      SF   
Sbjct: 1   MFQSFNVSASALTAQRLRMDVISANMANVDTTRAKMVDGKWQPYRRKMVVMQPNESFSSF 60

Query: 55  MH------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
           ++       +GGV+V +I  DQ+ F   +DP HP A+ +G V+ PNV+ L E  D+    
Sbjct: 61  LNQAMNERSTGGVKVTEIIEDQTPFKLVYDPSHPDADENGYVQLPNVDPLKEMVDLMSAT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN+  +  +  M+   L++
Sbjct: 121 RSYEANVTVLNATKGMLMKALEI 143


>gi|57242334|ref|ZP_00370273.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           RM3195]
 gi|315638445|ref|ZP_07893622.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           JV21]
 gi|57017014|gb|EAL53796.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           RM3195]
 gi|315481436|gb|EFU72063.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           JV21]
          Length = 164

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA+TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANAQTTRTAEGG-PYRRREVIFKANDFDALI 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            +++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NQQINKDNNFLKYENPLNDPSSPEEAKPAIMSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V +PNVN ++E AD+ E  R Y AN+     +  +  + +D+L+
Sbjct: 119 YVAFPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDILK 163


>gi|229826300|ref|ZP_04452369.1| hypothetical protein GCWU000182_01672 [Abiotrophia defectiva ATCC
           49176]
 gi|229789170|gb|EEP25284.1| hypothetical protein GCWU000182_01672 [Abiotrophia defectiva ATCC
           49176]
          Length = 147

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 15/142 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------V 54
           +  +  I+ +G+  Q  R  +I++NIAN  TT D  G + YRRK + F E         +
Sbjct: 3   IFGAMDISATGMTAQQLRTDVIAQNIANINTTRDQNG-NVYRRKNVVFTEKDVTGFSQIL 61

Query: 55  MHGSG----GVRVKKIGVDQSTFVE-EFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
           +  +G    GV+V  I  D  + V   +DP HP AN  G V YPNVN + E  DM +  R
Sbjct: 62  LRTAGRVGNGVKVTSIYSDTKSPVRLVYDPSHPDANEDGYVTYPNVNTVQEMTDMIDATR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            Y AN+     + +M+   L++
Sbjct: 122 SYEANVTAFNATKNMILKALEM 143


>gi|94312667|ref|YP_585876.1| flagellar basal body rod protein FlgC [Cupriavidus metallidurans
           CH34]
 gi|93356519|gb|ABF10607.1| flagellar basal body rod protein FlgC [Cupriavidus metallidurans
           CH34]
          Length = 135

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 5/126 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV----MHGSGGVRVKK 65
           +A S +A QS RM + + N+ANA +    P   PYR K + FE          GGV+V  
Sbjct: 9   VAGSAMAAQSQRMNVTASNLANADS-AVAPNGQPYRAKQVIFEMAPTPGQSDVGGVQVAG 67

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D +      +P HP+A+A+G V  PNVN + E  +M   +R Y AN++ +  + +MM
Sbjct: 68  VMEDTAPARMVHNPSHPLADANGYVTMPNVNPVEEMVNMISASRSYQANVEVLNTAKNMM 127

Query: 126 TTTLDL 131
             TL +
Sbjct: 128 LKTLTI 133


>gi|296330833|ref|ZP_06873308.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674351|ref|YP_003866023.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296151838|gb|EFG92712.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412595|gb|ADM37714.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 150

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 18/143 (12%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTISFEEV--------- 54
           S +++ S L  Q  RM ++S N+AN  TT     +    PYRRK +S +           
Sbjct: 6   SLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWMPYRRKMVSLQSKGESFSSILN 65

Query: 55  --MHGSG----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
             M GSG    GV+V KI  D S F   +DP  P ANA G V+ PNV+ L E  D+  + 
Sbjct: 66  SQMSGSGNAGNGVKVSKITEDDSEFNLVYDPTDPDANAEGYVQKPNVDPLKEMVDLVSST 125

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN+  +  +  M+   L++
Sbjct: 126 RSYEANVTAMNATKGMLMKALEI 148


>gi|293409440|ref|ZP_06653016.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
 gi|291469908|gb|EFF12392.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
          Length = 134

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALTAQSQRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVNAAPGAATGGVKVGD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|16799794|ref|NP_470062.1| flagellar basal body rod protein FlgC [Listeria innocua Clip11262]
 gi|16802753|ref|NP_464238.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           EGD-e]
 gi|46906962|ref|YP_013351.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47091674|ref|ZP_00229470.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           4b H7858]
 gi|47095277|ref|ZP_00232888.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           1/2a F6854]
 gi|217965191|ref|YP_002350869.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HCC23]
 gi|224498793|ref|ZP_03667142.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           Finland 1988]
 gi|224501984|ref|ZP_03670291.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           R2-561]
 gi|226223342|ref|YP_002757449.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           Clip81459]
 gi|254824009|ref|ZP_05229010.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J1-194]
 gi|254829368|ref|ZP_05234055.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N3-165]
 gi|254830298|ref|ZP_05234953.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           10403S]
 gi|254900053|ref|ZP_05259977.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           J0161]
 gi|254911394|ref|ZP_05261406.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           J2818]
 gi|254932009|ref|ZP_05265368.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HPB2262]
 gi|254935721|ref|ZP_05267418.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           F6900]
 gi|255022492|ref|ZP_05294478.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J1-208]
 gi|255025679|ref|ZP_05297665.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J2-003]
 gi|284801041|ref|YP_003412906.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5578]
 gi|284994183|ref|YP_003415951.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5923]
 gi|290894009|ref|ZP_06556984.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J2-071]
 gi|16410100|emb|CAC98789.1| lmo0711 [Listeria monocytogenes EGD-e]
 gi|16413171|emb|CAC95951.1| lin0719 [Listeria innocua Clip11262]
 gi|46880228|gb|AAT03528.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47016348|gb|EAL07270.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           1/2a F6854]
 gi|47019993|gb|EAL10730.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           4b H7858]
 gi|217334461|gb|ACK40255.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HCC23]
 gi|225875804|emb|CAS04507.1| Putative flagellar basal-body rod protein FlgC [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258601782|gb|EEW15107.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N3-165]
 gi|258608305|gb|EEW20913.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           F6900]
 gi|284056603|gb|ADB67544.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5578]
 gi|284059650|gb|ADB70589.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5923]
 gi|290556455|gb|EFD89994.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J2-071]
 gi|293583560|gb|EFF95592.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HPB2262]
 gi|293589332|gb|EFF97666.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           J2818]
 gi|293593236|gb|EFG00997.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J1-194]
 gi|307570250|emb|CAR83429.1| flagellar basal-body rod protein [Listeria monocytogenes L99]
 gi|313610106|gb|EFR85431.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           F2-208]
 gi|328467276|gb|EGF38356.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 1816]
 gi|328475672|gb|EGF46421.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 220]
 gi|332311135|gb|EGJ24230.1| Flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           Scott A]
          Length = 136

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)

Query: 10  IANSGLAVQSAR--MQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGSGGV 61
           I  SG A+ +A+  M++ S NIANA ++   PG  P+ RK +       FE  + G+ GV
Sbjct: 5   INTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTGTKGV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   ++ +
Sbjct: 64  KVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQAN 123

Query: 122 HDMMTTTLDL 131
             MM   L++
Sbjct: 124 EKMMEKDLEI 133


>gi|289433989|ref|YP_003463861.1| flagellar basal-body rod protein FlgC [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|315301963|ref|ZP_07872959.1| flagellar basal-body rod protein FlgC [Listeria ivanovii FSL
           F6-596]
 gi|289170233|emb|CBH26773.1| flagellar basal-body rod protein FlgC [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|313629670|gb|EFR97807.1| flagellar basal-body rod protein FlgC [Listeria ivanovii FSL
           F6-596]
 gi|313639044|gb|EFS04033.1| flagellar basal-body rod protein FlgC [Listeria seeligeri FSL
           S4-171]
          Length = 136

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)

Query: 10  IANSGLAVQSAR--MQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGSGGV 61
           I  SG A+ +A+  M++ S NIANA ++   PG  P+ RK +       FE  + G+ GV
Sbjct: 5   INTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVMSEISPFETALTGTKGV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   ++ +
Sbjct: 64  KVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQAN 123

Query: 122 HDMMTTTLDL 131
             MM   L++
Sbjct: 124 EKMMEKDLEI 133


>gi|218549198|ref|YP_002382989.1| flagellar basal body rod protein FlgC [Escherichia fergusonii ATCC
           35469]
 gi|218356739|emb|CAQ89367.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
 gi|324113869|gb|EGC07843.1| flagellar basal-body rod protein FlgC [Escherichia fergusonii B253]
 gi|325497618|gb|EGC95477.1| flagellar basal body rod protein FlgC [Escherichia fergusonii
           ECD227]
          Length = 134

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALTAQSQRLNVAASNLANADSVTG--PDGQPYRAKHVVFQVDNAPGAATGGVKVAG 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VVESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|156934442|ref|YP_001438358.1| flagellar basal body rod protein FlgC [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532696|gb|ABU77522.1| hypothetical protein ESA_02273 [Cronobacter sakazakii ATCC BAA-894]
          Length = 134

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKK 65
           IA S +  QS RM + + N+ANA + TG  P   PYR K + F+ +   G+  GGV+V  
Sbjct: 9   IAGSAMTAQSKRMNVAASNLANADSATG--PDGQPYRAKQVVFQVDAAPGAATGGVKVTD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VVESQAPDKLVYEPGNPLADAKGYVRMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|311992325|gb|ADQ26736.1| proximal rod protein [Aeromonas hydrophila]
          Length = 138

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 6/128 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---SFEEVM---HGSGGVRV 63
           IA S ++ QS R+  ++ N+ANA +   +     + R+ I     ++ M     S GV V
Sbjct: 8   IAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARRPIFAAQLDQAMSDKQASAGVEV 67

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           K I   ++  ++E++P HP+A+  G +  PNVN++ E ADM   +R Y  N+Q    +  
Sbjct: 68  KGIVESEAPLLKEYNPNHPMADKDGFIFKPNVNMVEEMADMINASRSYQTNVQVADSAKK 127

Query: 124 MMTTTLDL 131
           M+  TL+L
Sbjct: 128 MLQQTLNL 135


>gi|224417697|ref|ZP_03655703.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
           98-5491]
 gi|253827046|ref|ZP_04869931.1| flagellar basal body rod protein [Helicobacter canadensis MIT
           98-5491]
 gi|313141240|ref|ZP_07803433.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
           98-5491]
 gi|253510452|gb|EES89111.1| flagellar basal body rod protein [Helicobacter canadensis MIT
           98-5491]
 gi|313130271|gb|EFR47888.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
           98-5491]
          Length = 166

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 36/165 (21%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R+ +IS NIANA TT    G  PYRR     K   F++V++  
Sbjct: 2   FLSSFDISGYGLSAQRQRVNLISSNIANANTTRTDEGG-PYRRRELILKAFDFDKVLNQK 60

Query: 59  G------------------------------GVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V KI  D S    +++P HP AN+ G
Sbjct: 61  YQKSNNLLKYEDPLDEMDSFNEQREPKPALMSVYVDKIVRDDSQPKMKYEPNHPDANSEG 120

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N +VE AD+ E  + Y AN+   + + +M    + + +
Sbjct: 121 YVAYPNINAVVEMADLIEATKAYQANVAAFQSAKNMANNAISMFQ 165


>gi|16078682|ref|NP_389501.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221309494|ref|ZP_03591341.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313819|ref|ZP_03595624.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318743|ref|ZP_03600037.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323014|ref|ZP_03604308.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321315385|ref|YP_004207672.1| flagellar basal body rod protein FlgC [Bacillus subtilis BSn5]
 gi|120294|sp|P24501|FLGC_BACSU RecName: Full=Flagellar basal-body rod protein flgC
 gi|142916|gb|AAA22442.1| flgC [Bacillus subtilis]
 gi|2633991|emb|CAB13492.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|320021659|gb|ADV96645.1| flagellar basal body rod protein FlgC [Bacillus subtilis BSn5]
          Length = 150

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 18/143 (12%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTISFEEV--------- 54
           S +++ S L  Q  RM ++S N+AN  TT     +    PYRRK +S +           
Sbjct: 6   SLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESFSSILN 65

Query: 55  --MHGSG----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
             M GSG    GV+V KI  D S F   +DP  P ANA G V+ PNV+ L E  D+  + 
Sbjct: 66  SQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDANAEGYVQKPNVDPLKEMVDLVSST 125

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN+  +  +  M+   L++
Sbjct: 126 RSYEANVTAMNATKGMLMKALEI 148


>gi|291484170|dbj|BAI85245.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           natto BEST195]
          Length = 150

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 18/143 (12%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTISFEEV--------- 54
           S +++ S L  Q  RM ++S N+AN  TT     +    PYRRK +S +           
Sbjct: 6   SLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESFSSILN 65

Query: 55  --MHGSG----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
             M GSG    GV+V KI  D S F   +DP  P ANA G V+ PNV+ L E  D+  + 
Sbjct: 66  SQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDANADGYVQKPNVDPLKEMVDLVSST 125

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN+  +  +  M+   L++
Sbjct: 126 RSYEANVTAMNATKGMLMKALEI 148


>gi|183598615|ref|ZP_02960108.1| hypothetical protein PROSTU_02015 [Providencia stuartii ATCC 25827]
 gi|188020794|gb|EDU58834.1| hypothetical protein PROSTU_02015 [Providencia stuartii ATCC 25827]
          Length = 134

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 74/131 (56%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L++   I+ S L  QS R+ + + N+ANA +    P  +P+R K + F+   +  +G GG
Sbjct: 3   LLSIFDISASALTAQSQRLNVSASNMANAESVVG-PDGEPFRAKQVVFQMTPQGRNGVGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +    E+ PGHP+A+  G V+ PNV+++ E  +    +R Y ANL+ +  
Sbjct: 62  VRVSQLIEDPTPPRMEYKPGHPLADEKGYVRMPNVDMVGEMINTISASRSYQANLEVMNT 121

Query: 121 SHDMMTTTLDL 131
           +  ++  TL +
Sbjct: 122 AKTLLQKTLTI 132


>gi|117621411|ref|YP_857345.1| flagellar basal body rod protein FlgC [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562818|gb|ABK39766.1| flagellar basal-body rod protein FlgC [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 139

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 6/128 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---SFEEVM---HGSGGVRV 63
           IA S ++ QS R+  ++ N+ANA +   +     + R+ I     ++ M     S GV V
Sbjct: 9   IAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARRPIFAAQLDQAMSDKQASAGVEV 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           K I   ++  ++E++P HP+A+  G +  PNVN++ E ADM   +R Y  N+Q    +  
Sbjct: 69  KGIVESEAPLLKEYNPNHPMADKDGFIFKPNVNMVEEMADMINASRSYQTNVQVADSAKK 128

Query: 124 MMTTTLDL 131
           M+  TL+L
Sbjct: 129 MLQQTLNL 136


>gi|253996321|ref|YP_003048385.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8]
 gi|253983000|gb|ACT47858.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8]
          Length = 135

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKK 65
           +I+ S ++ Q+ R+  ++ N+ANA +     G+ PY+ K + F  +   S    GV+V K
Sbjct: 8   NISGSAMSAQAQRLNTVASNLANADSATSANGT-PYKSKQVVFSAMPSKSPDVSGVKVTK 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D+S     +DP HP+AN  G V  PNVNV  E  +M   +R Y  N++T+  +  M+
Sbjct: 67  VVEDKSAPRMIYDPKHPLANDKGYVSMPNVNVTEEMVNMISASRAYQNNVETMNATKTML 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 MKTLTI 132


>gi|94263245|ref|ZP_01287062.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
 gi|93456463|gb|EAT06583.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
          Length = 144

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 17/147 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           MD L A  +I+ S L  + +R+ I S N+ANA TT    G  PYR K++ FE        
Sbjct: 1   MDILTA-MNISGSALKAERSRLNIASMNMANANTTRTVEGG-PYRAKSVVFEARPLERDF 58

Query: 54  --VMHGSGGVRVKKIGV-----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
              + G+   R++K+ V     D++ F E ++P HP A+ +GIV+YPNVN   +  DM  
Sbjct: 59  NTTLQGAAS-RLRKVEVVEVVEDRAPFREVYEPHHPDADENGIVRYPNVNTAEQMVDMMN 117

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  +    +M    L++ R
Sbjct: 118 ARRSYEANVAALDAVKEMALRALEISR 144


>gi|283833632|ref|ZP_06353373.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
 gi|291071315|gb|EFE09424.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
          Length = 134

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 72/126 (57%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+ +   G+  GGV+V  
Sbjct: 9   IAGSALTAQSKRLNVAASNMANADSVTG--PDGQPYRAKQVVFQVDAAPGAATGGVKVAD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +     +M
Sbjct: 67  VIESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSLM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|260597443|ref|YP_003210014.1| flagellar basal body rod protein FlgC [Cronobacter turicensis
           z3032]
 gi|260216620|emb|CBA29913.1| Flagellar basal-body rod protein flgC [Cronobacter turicensis
           z3032]
          Length = 134

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKK 65
           IA S +  QS RM + + N+ANA + TG  P   PYR K + F+ +   G+  GGV+V  
Sbjct: 9   IAGSAMTAQSKRMNVAASNLANADSATG--PDGQPYRAKQVIFQVDAAPGAATGGVKVTD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VVESQAPDKLVYEPGNPLADAKGYVRMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|317129211|ref|YP_004095493.1| flagellar basal-body rod protein FlgC [Bacillus cellulosilyticus
           DSM 2522]
 gi|315474159|gb|ADU30762.1| flagellar basal-body rod protein FlgC [Bacillus cellulosilyticus
           DSM 2522]
          Length = 148

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 26/142 (18%)

Query: 13  SGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTISFEEVMHGSG------- 59
           S L  Q  RM ++S N+ANA TT      G+     PYRRK +  E+  +GSG       
Sbjct: 12  SALTAQRLRMDVVSSNMANADTTRARLVDGEW---QPYRRKMVVLEQ--NGSGFSSHLDK 66

Query: 60  --------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV+V++I  D++ F   F P HP AN  G V+ PNV+ L E  D+    R Y
Sbjct: 67  AMGKTHGNGVKVREIVEDETPFRLVFQPDHPDANEDGYVELPNVDPLKEMIDLMSATRSY 126

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+ T+    +M+   L++ R
Sbjct: 127 EANVTTLDAHKNMLLKALEIGR 148


>gi|157371209|ref|YP_001479198.1| flagellar basal body rod protein FlgC [Serratia proteamaculans 568]
 gi|157322973|gb|ABV42070.1| flagellar basal-body rod protein FlgC [Serratia proteamaculans 568]
          Length = 134

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 4/125 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGGVRVKKI 66
           I+ S L+ QS R+ + + N+ANA +    P   PYR K + FE        +GGVRV ++
Sbjct: 9   ISGSALSAQSQRLNVSASNMANADSV-SGPDGQPYRAKQVVFEVASAAGQPTGGVRVAQV 67

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D +     + PG+P+A+  G V+ PNV+V+ E  +    +R Y AN++ +  +  MM 
Sbjct: 68  VDDPAPERLVYQPGNPLADGKGYVRMPNVDVVGEMVNTISASRSYQANVEVLNTTKSMMM 127

Query: 127 TTLDL 131
            TL L
Sbjct: 128 KTLTL 132


>gi|220934392|ref|YP_002513291.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995702|gb|ACL72304.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 139

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 7/128 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG------VRV 63
           ++ S L+ QS R+  I+ N+ANA+    TP    YR K   F  V+  +G       VRV
Sbjct: 10  VSGSALSAQSVRLNAIASNMANAQVASQTP-EGAYRAKHPVFASVLQAAGQSGSATPVRV 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             +   Q+  V E+ P HP+AN  G +  PNV+V+ E A+M   +R Y  N++ +  +  
Sbjct: 69  VNVLESQAEPVAEYAPNHPLANEQGYIFKPNVSVVEEMANMISASRSYQNNVEVMNTTKQ 128

Query: 124 MMTTTLDL 131
           ++  TL L
Sbjct: 129 LLLRTLQL 136


>gi|237731005|ref|ZP_04561486.1| flagellar basal body rod protein FlgC [Citrobacter sp. 30_2]
 gi|226906544|gb|EEH92462.1| flagellar basal body rod protein FlgC [Citrobacter sp. 30_2]
          Length = 134

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 4/125 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKKI 66
           IA S L  QS R+ + + N+ANA +    P   PYR K + F+ +   G+  GGV+V  +
Sbjct: 9   IAGSALTAQSKRLNVAASNMANADSV-SGPDGQPYRAKQVVFQVDAAPGAATGGVKVADV 67

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +     +M 
Sbjct: 68  IESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSLML 127

Query: 127 TTLDL 131
            TL L
Sbjct: 128 KTLTL 132


>gi|268589984|ref|ZP_06124205.1| flagellar basal-body rod protein FlgC [Providencia rettgeri DSM
           1131]
 gi|291314702|gb|EFE55155.1| flagellar basal-body rod protein FlgC [Providencia rettgeri DSM
           1131]
          Length = 134

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L++   I+ S L  QS R+ + + N+ANA +    P   PYR K + F+    G    GG
Sbjct: 3   LLSIFDISASALTAQSQRLNVSASNMANAESIAG-PDGQPYRAKQVVFQMAPQGRHEVGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +    E+ PGHP A+  G V+ PNV+++ E  +    +R Y ANL+ +  
Sbjct: 62  VRVSELIEDPTPPRMEYKPGHPSADEKGYVQMPNVDMVGEMINTISASRSYQANLEVMNT 121

Query: 121 SHDMMTTTLDL 131
           +  ++  TL +
Sbjct: 122 AKTLLQKTLTI 132


>gi|317047689|ref|YP_004115337.1| flagellar basal-body rod protein FlgC [Pantoea sp. At-9b]
 gi|316949306|gb|ADU68781.1| flagellar basal-body rod protein FlgC [Pantoea sp. At-9b]
          Length = 134

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHG--SGGVRVKK 65
           IA S +  QS R+ + + N+ANA + TG  P   PY  K + F+ +   G  +GGV+V  
Sbjct: 9   IAGSAMTAQSQRLNVSASNLANADSVTG--PDGQPYVAKQVVFQTDAAPGMATGGVKVAG 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D S     +DPG+P+A+  G VK PNV+V+ ET +    +R Y AN++ +     MM
Sbjct: 67  VVDDPSPAKLVYDPGNPMADQKGYVKMPNVDVVAETVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 MKTLTM 132


>gi|206896029|ref|YP_002246681.1| flagellar basal-body rod protein FlgC [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206738646|gb|ACI17724.1| flagellar basal-body rod protein FlgC [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 134

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 6/128 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKI 66
           IA S L  Q  RM +IS NIAN  TT  TP   PY RK +SF+ +M G     GV+V ++
Sbjct: 9   IAGSALTAQRFRMDVISSNIANLETT-RTPEGGPYHRKIVSFQSMMVGENQGQGVKVAQL 67

Query: 67  GVDQSTFVEEFDPGHPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             D S  +  +DP HP A+  +G+V YP+++++ E  D+    R +  N   I  +  + 
Sbjct: 68  TEDPSERL-VYDPSHPDADPETGMVHYPDMDLITELTDLMSAQRSFEMNSNAIAIARQVY 126

Query: 126 TTTLDLLR 133
           T ++++ R
Sbjct: 127 TKSMEIGR 134


>gi|50120637|ref|YP_049804.1| flagellar basal body rod protein FlgC [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611163|emb|CAG74609.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 134

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 6/127 (4%)

Query: 9   HIANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVK 64
            I+ S L+ QS R+ + + N+ANA + TG  P   PYR K + FE        +GGVRV 
Sbjct: 8   EISGSALSAQSQRLNVSASNLANADSVTG--PDGQPYRAKQVVFEVNAAPGQSTGGVRVA 65

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D S     ++PG+P+A+  G V+ PNV+ + E  +    +R Y AN++ +  +  M
Sbjct: 66  NVIEDPSPARLVYEPGNPLADGQGYVRMPNVDPVAEMVNTISASRSYQANVEVLNTTKSM 125

Query: 125 MTTTLDL 131
           M  TL +
Sbjct: 126 MLKTLTI 132


>gi|328947992|ref|YP_004365329.1| flagellar basal-body rod protein FlgC [Treponema succinifaciens DSM
           2489]
 gi|328448316|gb|AEB14032.1| flagellar basal-body rod protein FlgC [Treponema succinifaciens DSM
           2489]
          Length = 153

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 77/149 (51%), Gaps = 22/149 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----------- 52
           L  S +IA +G++V+  R  +IS NIANA TT    G   YR++++  E           
Sbjct: 3   LFTSINIAATGMSVERLRTDVISNNIANATTTRTQEGG-AYRKQSVIVEPIASSNPQWRF 61

Query: 53  -----EVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETA 102
                E+ +G G GVRV++I  D       +DP HP A  SG     V+YPNVN++ E  
Sbjct: 62  PFVDSELDNGPGKGVRVREIIKDSEQGRMVYDPSHPDAIQSGPNKGYVEYPNVNIVNEMV 121

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +M   NR Y AN   I+ S +M  + L++
Sbjct: 122 NMISANRAYEANSSVIQGSKEMFASALEI 150


>gi|296124187|ref|YP_003631965.1| flagellar basal-body rod protein FlgC [Planctomyces limnophilus DSM
           3776]
 gi|296016527|gb|ADG69766.1| flagellar basal-body rod protein FlgC [Planctomyces limnophilus DSM
           3776]
          Length = 137

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVM------HGSGGVR 62
           I+ SGL  Q  RM  I+ NIAN  TT +  G   P++R+ +  +          GS GV 
Sbjct: 7   ISTSGLIAQRTRMDTIAGNIANVNTTQNEEGKIAPFQRRLVMMQPASVGATSPTGSQGV- 65

Query: 63  VKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
              + +D  S     ++PGHP ANA G V YPN+NV+ E  +  E +R Y AN+ T++ +
Sbjct: 66  ASTVEIDTVSPPRMAYEPGHPHANAEGKVLYPNINVVTEFVNAMEASRAYEANVTTMEVT 125

Query: 122 HDMMTTTLDLL 132
            DM+  T  LL
Sbjct: 126 KDMIQNTFRLL 136


>gi|254853085|ref|ZP_05242433.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           R2-503]
 gi|255521221|ref|ZP_05388458.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J1-175]
 gi|300764524|ref|ZP_07074517.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N1-017]
 gi|258606433|gb|EEW19041.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           R2-503]
 gi|300514878|gb|EFK41932.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N1-017]
          Length = 136

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 9/130 (6%)

Query: 10  IANSGLAVQSAR--MQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGSGGV 61
           I  SG A+ +A+  M++ S NIANA ++   PG  P+ RK +       FE  + G+ GV
Sbjct: 5   INTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTGTKGV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V +I  D       +DP HP AN +G V Y NV++  E  ++    ++Y AN   ++ +
Sbjct: 64  KVSEISSDTGNVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQAN 123

Query: 122 HDMMTTTLDL 131
             MM   L++
Sbjct: 124 EKMMEKDLEI 133


>gi|238793996|ref|ZP_04637614.1| Flagellar basal-body rod protein flgC [Yersinia intermedia ATCC
           29909]
 gi|238726628|gb|EEQ18164.1| Flagellar basal-body rod protein flgC [Yersinia intermedia ATCC
           29909]
          Length = 134

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L+ QS R+ + + N+ANA + TG  P   PYR K + F+   +    +GGVRV +
Sbjct: 9   IAGSALSAQSQRLNVSASNMANADSVTG--PDGQPYRAKQVVFQVAAQPGQETGGVRVSQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  D +     + PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  +  +M
Sbjct: 67  IVDDPAPDRLVYQPGNPLADAKGYVRMPNVDVTGEMINTISASRSYQANVEVLNTTKSLM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|30019789|ref|NP_831420.1| flagellar basal body rod protein FlgC [Bacillus cereus ATCC 14579]
 gi|29895334|gb|AAP08621.1| Flagellar basal-body rod protein flgC [Bacillus cereus ATCC 14579]
          Length = 137

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHG--SGGVRVK 64
           SGL      MQ+ S NI NA T    PG+D Y R+++      SF  ++ G  + GV++K
Sbjct: 10  SGLTTARKWMQVTSNNIVNANTPA-APGADLYERRSVVLESNNSFASMLDGAPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|94987301|ref|YP_595234.1| flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731550|emb|CAJ54913.1| Flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 146

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SF 51
           MD++ A   I  S L+     + + + N+ANA+TT  TP   PYRRKT+          F
Sbjct: 1   MDFMTA-FDIGASALSADRTTINVTAMNLANAKTTR-TPEGGPYRRKTVIRAATDVDEPF 58

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            + M  +      GVR+  +  D     + ++PGHP A+ +G+V YP++NV+ E A++  
Sbjct: 59  SKQMQSALDRELKGVRILNVLPDNRPPKQIYEPGHPDADENGMVSYPDINVVEEMANLMT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN  TI    +M    LD+ R
Sbjct: 119 ASRNYEANSTTIDTVKNMYMRALDIGR 145


>gi|52080221|ref|YP_079012.1| flagellar basal body rod protein FlgC [Bacillus licheniformis ATCC
           14580]
 gi|52785598|ref|YP_091427.1| flagellar basal body rod protein FlgC [Bacillus licheniformis ATCC
           14580]
 gi|319646000|ref|ZP_08000230.1| flagellar basal-body rod protein [Bacillus sp. BT1B_CT2]
 gi|52003432|gb|AAU23374.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
           14580]
 gi|52348100|gb|AAU40734.1| FlgC [Bacillus licheniformis ATCC 14580]
 gi|317391750|gb|EFV72547.1| flagellar basal-body rod protein [Bacillus sp. BT1B_CT2]
          Length = 150

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 18/143 (12%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTIS-------FEEVMH 56
           S +I+ S L  Q  RM  +S N+AN  TT          PYRRK +S       F  V+ 
Sbjct: 6   SINISASALTAQRVRMDTVSSNLANMDTTRAKLVDGQWQPYRRKLVSTAPKGESFSSVLQ 65

Query: 57  GS--------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S         GV+V KI  D++ F   +DP HP AN  G V+ PNV+ L E  D+  + 
Sbjct: 66  SSMNASARVGEGVKVTKISEDKTPFKLVYDPTHPDANEDGYVQMPNVDPLKEMVDLMSST 125

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN+  +  +  M+   L++
Sbjct: 126 RSYEANVTAMNATKGMLMKALEI 148


>gi|77460471|ref|YP_349978.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
           Pf0-1]
 gi|77384474|gb|ABA75987.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 147

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGG------ 60
           +IA SG++ Q+ R+  ++ NIANA T   +     YR +   F  +  G  SGG      
Sbjct: 8   NIAGSGMSAQTTRLNTVASNIANAETVSSSI-DQTYRARHPVFATMFQGGQSGGSNSLFQ 66

Query: 61  --------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                   V+V  +  DQS     ++P HP A+A G V YPNVNV+ E ADM   +R + 
Sbjct: 67  NQDAAGQGVQVMGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMISASRSFQ 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N + +  +  MM   L L
Sbjct: 127 TNAEMMNTAKTMMQKVLTL 145


>gi|114566383|ref|YP_753537.1| flagellar basal body rod protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337318|gb|ABI68166.1| flagellar basal body rod protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 155

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 67/144 (46%), Gaps = 23/144 (15%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------------------- 53
           SGL  Q  RM  I+ N+AN  TT     + PYRR+ + FE                    
Sbjct: 12  SGLTAQRLRMDTIASNMANVETTRVDNRTGPYRRQVVVFEARNASAPKKRFQRFLEEQSQ 71

Query: 54  -VMHGSGGVRVKKI---GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                + GVRVK+I     +++ +   +DP HP A+  G V YPNVN++ E  +M    R
Sbjct: 72  TFNAANSGVRVKQIREINENEAPYRRVYDPSHPEADNEGYVNYPNVNIVEEMINMISATR 131

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN Q I+ +  +    LD+ R
Sbjct: 132 AYEANAQVIEATKSIAMRALDIGR 155


>gi|295696111|ref|YP_003589349.1| flagellar basal-body rod protein FlgC [Bacillus tusciae DSM 2912]
 gi|295411713|gb|ADG06205.1| flagellar basal-body rod protein FlgC [Bacillus tusciae DSM 2912]
          Length = 155

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 73/148 (49%), Gaps = 26/148 (17%)

Query: 10  IANSGLAVQSARMQIISENIANARTT---GDTPGSDPYRRKTI---------SFEEVMHG 57
           I+ SGL+ Q  RM +I+ NIANA TT     TPG  PYRR+ +         SF   +  
Sbjct: 9   ISGSGLSAQRLRMDVIAGNIANADTTRRPDGTPG--PYRRRMVVMEPQPAPGSFAAALAS 66

Query: 58  SGG------VRVKKIGVDQSTFVEEFDPGHP--VANAS----GIVKYPNVNVLVETADMR 105
           +GG      VRV  I  D S F  ++DP +P  V N +    G V+ PNV+V  E  D+ 
Sbjct: 67  AGGTGVPEGVRVSAIVEDPSPFQLKYDPSNPDAVQNPASPLYGYVQLPNVDVATEMVDLI 126

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +R Y AN+  +     M    LDL R
Sbjct: 127 SASRAYEANVTALDAGKMMAVKALDLGR 154


>gi|291562032|emb|CBL40848.1| flagellar basal-body rod protein FlgC [butyrate-producing bacterium
           SS3/4]
          Length = 149

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 69/146 (47%), Gaps = 19/146 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVM 55
            + S  I+ SG++ Q  RM I +ENIAN  TT    G  PYRRK +        SF + M
Sbjct: 3   FLGSFDISASGMSAQRVRMDIAAENIANMDTTRTESGG-PYRRKNVLLESYSDTSFAQAM 61

Query: 56  H----GSG------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                G G      GVRV  I  D     + ++P HP A+A G V  PNV+VL ET D  
Sbjct: 62  ENAARGKGITSRHAGVRVSGIVEDDREAKKVYNPDHPDADADGYVTMPNVDVLKETVDSM 121

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDL 131
              R Y AN+  +     M    L++
Sbjct: 122 SATRSYEANVTALNAIKLMAQKALEI 147


>gi|229160708|ref|ZP_04288700.1| Flagellar basal-body rod protein FlgC [Bacillus cereus R309803]
 gi|228622723|gb|EEK79557.1| Flagellar basal-body rod protein FlgC [Bacillus cereus R309803]
          Length = 137

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGS--GGVRVK 64
           SGL      M++ S NI NA TT + PG+D Y R+++      SF  +++ +   GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTAE-PGADLYERRSVVLESNNSFANMLNSTPANGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKAENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMIAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|330830305|ref|YP_004393257.1| flagellar basal-body rod protein FlgC [Aeromonas veronii B565]
 gi|328805441|gb|AEB50640.1| Flagellar basal-body rod protein FlgC [Aeromonas veronii B565]
          Length = 139

 Score = 74.3 bits (181), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 6/128 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---SFEEVM---HGSGGVRV 63
           IA S ++ QS R+  ++ N+ANA +   +  +  + R+ +     ++ M    GS GV V
Sbjct: 9   IAGSAMSAQSVRLNTVASNMANADSVSSSVENTYHARRPVFAAQLDQAMSDKQGSVGVEV 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           K I   ++  ++E++P HP+A+  G +  PNVN++ E ADM   +R Y  N+Q    +  
Sbjct: 69  KGIVESKAPLLKEYNPNHPMADKDGFIFKPNVNMVEEMADMINASRSYQTNVQVADSAKK 128

Query: 124 MMTTTLDL 131
           M+  TL L
Sbjct: 129 MLQQTLQL 136


>gi|193069522|ref|ZP_03050476.1| flagellar basal-body rod protein FlgC [Escherichia coli E110019]
 gi|192957270|gb|EDV87719.1| flagellar basal-body rod protein FlgC [Escherichia coli E110019]
          Length = 134

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L  QS R+ +   N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALTAQSQRLNVAVSNLANADSVTG--PDGQPYRAKQVVFQVNAAPGAATGGVKVAD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|269138580|ref|YP_003295280.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|267984240|gb|ACY84069.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|304558590|gb|ADM41254.1| Flagellar basal-body rod protein FlgC [Edwardsiella tarda FL6-60]
          Length = 134

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 8/133 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVMHGSG--- 59
           L++   I+ S L  QS RM + + N+ANA + TG  P  +PYR K + F+ V  G+G   
Sbjct: 3   LLSIFDISGSALTAQSKRMNVAASNLANADSVTG--PDGEPYRAKQVVFQ-VKPGAGEEI 59

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV+V ++  D +     + PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +
Sbjct: 60  GGVQVSQVVDDPAPDRLVYQPGNPLADAKGYVRMPNVDVVGEMVNSIAASRSYQANVEVL 119

Query: 119 KQSHDMMTTTLDL 131
             +  +M  TL L
Sbjct: 120 NTTKSLMMKTLTL 132


>gi|289208112|ref|YP_003460178.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp. K90mix]
 gi|288943743|gb|ADC71442.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp. K90mix]
          Length = 139

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 7/125 (5%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------GSGGVRVKKI 66
           S L  QS R+  ++ N+ANA T    P  + YR K + F+ VM+       S GVRV  I
Sbjct: 13  SALTAQSVRLNTVASNLANANTVATNP-DEAYRAKQVLFQTVMNQADPNGASNGVRVAGI 71

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              Q+     ++P HP AN  G +  P ++V+ E A+M   +R Y AN++ ++ S  ++ 
Sbjct: 72  DESQAPPQPHYEPNHPQANEDGYIFRPAISVVEEMANMMSASRNYEANVEVMETSRQLLQ 131

Query: 127 TTLDL 131
            TL +
Sbjct: 132 RTLQI 136


>gi|170768138|ref|ZP_02902591.1| flagellar basal-body rod protein FlgC [Escherichia albertii
           TW07627]
 gi|170122904|gb|EDS91835.1| flagellar basal-body rod protein FlgC [Escherichia albertii
           TW07627]
          Length = 134

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALTAQSQRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVNAAPGAATGGVKVAD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VIESQAPDKWVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
              L L
Sbjct: 127 LKNLTL 132


>gi|229592132|ref|YP_002874251.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
           SBW25]
 gi|229363998|emb|CAY51548.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens
           SBW25]
          Length = 147

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 67/139 (48%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----------- 57
           +IA SG++ Q+ R+  ++ NIANA T   +     YR +   F  +  G           
Sbjct: 8   NIAGSGMSAQTTRLNTVASNIANAETVSSSI-DQTYRARHPVFATMFQGGQSGGSDSLFQ 66

Query: 58  ---SGGVRVKKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
              + G  V+ +GV  DQS     ++P HP AN  G V YPNVNV+ E ADM   +R + 
Sbjct: 67  DQGAAGSGVQVLGVVEDQSNLEARYEPNHPAANEKGYVYYPNVNVVEEMADMISASRSFQ 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N + +  +  MM   L L
Sbjct: 127 TNAEMMNTAKTMMQKVLTL 145


>gi|307718596|ref|YP_003874128.1| hypothetical protein STHERM_c09080 [Spirochaeta thermophila DSM
           6192]
 gi|306532321|gb|ADN01855.1| hypothetical protein STHERM_c09080 [Spirochaeta thermophila DSM
           6192]
 gi|315186391|gb|EFU20151.1| flagellar basal-body rod protein FlgC [Spirochaeta thermophila DSM
           6578]
          Length = 152

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 74/151 (49%), Gaps = 22/151 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L    +IA +GL  Q  RM +IS NIANA TT  T G  P+RR  + F            
Sbjct: 3   LFTPINIAATGLTAQRLRMDVISNNIANATTTRTTEGG-PFRRSRVVFRPRVEQPYWRSP 61

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVE-EFDPGHPVANASGIVK----YPNVNVLVETA 102
              + + +G G GVRV K+  D        +DP HP A  SG +K    YPNVN++ E  
Sbjct: 62  FLPKPLDNGLGKGVRVVKVEKDYDAKTRLVYDPTHPDAIKSGPLKGYVEYPNVNIVNEMV 121

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+ + +R Y ANL  +  S  M    L++ R
Sbjct: 122 DLIDASRAYEANLAVVNGSKTMFLKALEIGR 152


>gi|91202525|emb|CAJ72164.1| strongly similar to flagellar basal-body rod protein FlgC
           [Candidatus Kuenenia stuttgartiensis]
          Length = 147

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 13/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           + ++  I+ +GL  +  RM +I+ NIANA  T ++P   PYRR+ + F+ +++ +     
Sbjct: 6   VFSALDISATGLTAERIRMNVIANNIANANAT-NSPDGGPYRREQVEFQSILNKAANLSD 64

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  GGV+V  I   +  F + F PGHP A+ +G V+ PNVN+  E  D+   +R Y
Sbjct: 65  IDGMERLGGVKVSNIMKSKEPFNKVFIPGHPQADENGFVEMPNVNIATEMVDLVTASRSY 124

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            ANL  I  S D+    L ++
Sbjct: 125 EANLAVINSSKDITNQALSII 145


>gi|15615023|ref|NP_243326.1| flagellar basal body rod protein FlgC [Bacillus halodurans C-125]
 gi|10175080|dbj|BAB06179.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
          Length = 152

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 26/148 (17%)

Query: 9   HIANSGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTIS--------FEEV 54
           +I+ S L  Q  RM +IS N+ANA TT      G+    +PYRRK I+        F   
Sbjct: 8   NISGSALTSQRLRMDVISANMANAETTRARQVNGEW---EPYRRKMIAVQPNEQTPFSAH 64

Query: 55  MHGS---------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           +H +          GV+V  I  DQ+ F   + P HP AN  G V+ PNV+ L E  D+ 
Sbjct: 65  LHTAMKRSESKIGNGVKVSAIVEDQTPFKLVYQPDHPDANEEGYVEMPNVDPLREMVDLM 124

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+ T+  S +++   L++ R
Sbjct: 125 SATRSYEANVTTLNASKNILMKALEIGR 152


>gi|23099008|ref|NP_692474.1| flagellar basal body rod protein FlgC [Oceanobacillus iheyensis
           HTE831]
 gi|22777236|dbj|BAC13509.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831]
          Length = 151

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 19/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD----PYRRKTIS-------FE 52
           +  S + + SGL  Q  RM I+S N+ANA++T  T   D    PYRRK ++       F+
Sbjct: 3   IFNSMNTSASGLTAQRLRMDIVSSNVANAQSTRATINEDGEFEPYRRKMVTLQSEQNQFK 62

Query: 53  EVMHGSG--------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
            V+  +         GV+   I  D + F   ++P HP AN  G V+ PNV+ L E  D+
Sbjct: 63  NVLKHATSSSSTSTSGVKATSITEDNTPFNLVYNPQHPDANEQGYVEMPNVDPLKEMVDL 122

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
               R Y AN+     S  M+   L++
Sbjct: 123 MSATRSYEANITAFNASKGMLMKALEI 149


>gi|222824065|ref|YP_002575639.1| flagellar proximal rod protein FlgC [Campylobacter lari RM2100]
 gi|222539287|gb|ACM64388.1| flagellar proximal rod protein FlgC [Campylobacter lari RM2100]
          Length = 164

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFNELL 58

Query: 52  -------------EEVMHGSGGVRVKKIGV----------DQSTFVEEFDPGHPVANASG 88
                        E  ++     +  K  +          D   F  ++DP HP AN  G
Sbjct: 59  NKQITKDNNFLEYENPLNDPASQKDAKPAIMSVVVDKVVRDDKDFRMKYDPSHPDANEQG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V +PN+N ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAFPNINPVIEMADLIEATRAYQANVSAFTSTKTIAQSAIDLLR 163


>gi|134300249|ref|YP_001113745.1| flagellar basal-body rod protein FlgC [Desulfotomaculum reducens
           MI-1]
 gi|134052949|gb|ABO50920.1| flagellar basal-body rod protein FlgC [Desulfotomaculum reducens
           MI-1]
          Length = 145

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 70/142 (49%), Gaps = 12/142 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTG--DTPGSDPYRRK----------TISF 51
           L  S  I+ SG+  +  R+ +IS NIAN  T    + P S  YRR+          TIS 
Sbjct: 3   LFDSFGISASGMTSERLRLDLISNNIANMNTPSRPNDPNSPVYRRRVPIFAEQLRQTIST 62

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           + V     GVRVK I  D +      DP HP+A+  G V YPN+N++ E  DM   +R Y
Sbjct: 63  KGVEPKGAGVRVKAITEDPAPPRIVNDPSHPLADDKGNVAYPNINIVNEMVDMITASRTY 122

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  +  +  M    L++ R
Sbjct: 123 EANVTALNAAKSMALKALEISR 144


>gi|153938711|ref|YP_001391964.1| flagellar basal body rod protein FlgC [Clostridium botulinum F str.
           Langeland]
 gi|152934607|gb|ABS40105.1| flagellar basal-body rod protein FlgC [Clostridium botulinum F str.
           Langeland]
 gi|295319981|gb|ADG00359.1| flagellar basal-body rod protein FlgC [Clostridium botulinum F str.
           230613]
          Length = 144

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 68/135 (50%), Gaps = 13/135 (9%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-----GGVRV 63
            I+ SGL+ +  RM  I+ NI+NA TT  T    PY+RK   FEE ++       G    
Sbjct: 9   RISASGLSAERLRMDTIASNISNATTT-RTENGGPYKRKIAVFEENLNNELNKKNGATEK 67

Query: 64  KKIGVDQSTFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           K  GV  +  VE+       +DP HP A+A G V  PNVNVL E ADM  + R Y AN+ 
Sbjct: 68  KLYGVKATGIVEDPSPVRKMYDPSHPDADAEGYVSMPNVNVLNEMADMMASVRTYEANVT 127

Query: 117 TIKQSHDMMTTTLDL 131
            +     M    L++
Sbjct: 128 VMNAEKSMFGKALEI 142


>gi|317406203|gb|EFV86452.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
           C54]
          Length = 139

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 10/136 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L++   IA S L+ QS RM + + N+ANA +    P   PYR + + F+ V   +G    
Sbjct: 3   LLSIFDIAGSALSAQSQRMNVAASNMANADSVVG-PDGQPYRARQVVFQ-VNPPAGQALG 60

Query: 64  KKIGV--------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           ++IG         DQS   + +DP HP+A+A G V  PNV+ + ET +M   +R Y AN+
Sbjct: 61  REIGGVRVAGVVVDQSPLKQVYDPKHPLADAQGYVSMPNVDPVAETVNMIAASRSYQANV 120

Query: 116 QTIKQSHDMMTTTLDL 131
           + +  +  +M  TL +
Sbjct: 121 EVLNTAKSLMQKTLTI 136


>gi|302387782|ref|YP_003823604.1| flagellar basal-body rod protein FlgC [Clostridium saccharolyticum
           WM1]
 gi|302198410|gb|ADL05981.1| flagellar basal-body rod protein FlgC [Clostridium saccharolyticum
           WM1]
          Length = 148

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 68/145 (46%), Gaps = 18/145 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
            ++S +I+ S +  Q  R+ I SENIAN  TT  T    PYRRK +  E           
Sbjct: 3   FLSSMNISASAMTAQRLRLDIASENIANIDTT-RTEAGGPYRRKMVVLEARSENNFRRTL 61

Query: 55  --------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                      +GG+RV +I  D S F   + P HP A+ +G V+ PNV+++ ET D   
Sbjct: 62  MNAAGLGRQQSTGGIRVSQIVEDASPFKSVYSPEHPDADENGYVQMPNVDLIKETVDSMS 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R Y AN+        M +  L++
Sbjct: 122 ATRSYEANITAFNAIKFMASKALEI 146


>gi|311068140|ref|YP_003973063.1| flagellar basal body rod protein FlgC [Bacillus atrophaeus 1942]
 gi|310868657|gb|ADP32132.1| flagellar basal body rod protein FlgC [Bacillus atrophaeus 1942]
          Length = 149

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 23/145 (15%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTIS-------FEE 53
           S +++ S L  Q  RM ++S N+AN  TT      G+     PYRRK +S       F  
Sbjct: 6   SLNVSGSALTAQRVRMDVVSSNLANMDTTRAKQVDGEWV---PYRRKLVSLQSNGESFSS 62

Query: 54  VMH-------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           ++H          GV+V K+  D S F   +DP +P AN  G V+ PNV+ L E  D+  
Sbjct: 63  ILHSRMSSGDAGNGVKVTKVTEDDSDFNLVYDPTNPDANEEGYVQKPNVDPLKEMVDLVS 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
           + R Y AN+  +  S  M+   L++
Sbjct: 123 STRSYEANVTAMNASKGMLLKALEI 147


>gi|212634346|ref|YP_002310871.1| flagellar basal body rod protein FlgC [Shewanella piezotolerans
           WP3]
 gi|212555830|gb|ACJ28284.1| Flagellar basal-body rod protein FlgC [Shewanella piezotolerans
           WP3]
          Length = 138

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-----HGSGGVRV 63
           ++A SG++ QS R+   + NIANA     + G + YR +   FE  M     H S    V
Sbjct: 8   NVAGSGMSAQSVRLNTTASNIANADAVSSSAG-ETYRARHPIFEAEMSKAQQHQSASQSV 66

Query: 64  KKIGVDQSTFV--EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
              G+ +S     +EF PGHP+A+  G +  PNVNV+ E A+M   +R Y  N+Q    +
Sbjct: 67  AVKGIVESDLPLNKEFSPGHPMADTDGFIYKPNVNVMEEMANMISASRSYQMNVQVTDAA 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KSMLQQTLRI 136


>gi|229029424|ref|ZP_04185507.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1271]
 gi|228731883|gb|EEL82782.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1271]
          Length = 137

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHG--SGGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++    + GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDAAPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPNV+V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNVDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|71906389|ref|YP_283976.1| flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB]
 gi|71846010|gb|AAZ45506.1| Flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB]
          Length = 137

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 6/128 (4%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-----SGGVRV 63
            +++S +  QS R+   + N+ANA +     G  PYR K + FE    G     S GVRV
Sbjct: 8   QVSSSAMTAQSMRLNTTASNLANADSVISADG-KPYRAKQVVFEATPMGNAGDSSKGVRV 66

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++I  D S     +DP +P A+  G V +PNVNV+ E  +M   +R Y  N++ +  +  
Sbjct: 67  RQIVEDASPPRLVYDPKNPAADEKGYVAFPNVNVVEEMTNMISASRSYQTNVEVMNTAKT 126

Query: 124 MMTTTLDL 131
           M+  TL +
Sbjct: 127 MLLRTLSI 134


>gi|312962590|ref|ZP_07777080.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens WH6]
 gi|311283170|gb|EFQ61761.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens WH6]
          Length = 147

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 27/144 (18%)

Query: 9   HIANSGLAVQSARMQIISENIANART---------------------TGDTPGSDPYRRK 47
           +IA SG++ Q+ R+  ++ NIANA T                      G   GSD     
Sbjct: 8   NIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQAGQNGGSDSL--- 64

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
              F+E      GV+V  +  DQS     ++P HP AN  G V YPNVNV+ E ADM   
Sbjct: 65  ---FQEQDAAGKGVQVLGVVEDQSNLEARYEPNHPAANEKGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
           +R +  N + +  +  MM   L L
Sbjct: 122 SRSFQTNAEMMNTAKTMMQKVLTL 145


>gi|332702980|ref|ZP_08423068.1| flagellar basal-body rod protein FlgC [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553129|gb|EGJ50173.1| flagellar basal-body rod protein FlgC [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 147

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 16/145 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD++ A   +A SGL  +  ++ IIS N+AN  TT    G  PYRRKT+ F+     S  
Sbjct: 1   MDFMTA-LDVAASGLTAKRTQLNIISSNLANINTTRTAEGG-PYRRKTVVFQTTGTRSPF 58

Query: 59  ------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV++  I  D   F    DPGHP A+  G V++P++NV+ E A M  
Sbjct: 59  DSAMMDAMERELKGVKISHITKDNRPFKIVNDPGHPDADEFGNVRFPDINVVEEMAHMIT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R Y AN  +++    M +  L +
Sbjct: 119 AMRSYEANAASVESIKSMFSKALQI 143


>gi|253998490|ref|YP_003050553.1| flagellar basal-body rod protein FlgC [Methylovorus sp. SIP3-4]
 gi|313200565|ref|YP_004039223.1| flagellar basal-body rod protein flgc [Methylovorus sp. MP688]
 gi|253985169|gb|ACT50026.1| flagellar basal-body rod protein FlgC [Methylovorus sp. SIP3-4]
 gi|312439881|gb|ADQ83987.1| flagellar basal-body rod protein FlgC [Methylovorus sp. MP688]
          Length = 134

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKK 65
           +++ S ++ QS R+  ++ N+ANA +     G  PY+ K + F      +    GV+V++
Sbjct: 8   NVSGSAMSAQSQRLNAVASNLANADSATSANG-QPYKAKQVVFSATPTNNAAVSGVKVQQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D S     +DP HP ANA G V  PNVNV  E  +M   +R Y  N++T+  +  M+
Sbjct: 67  VIEDPSPPKVVYDPKHPAANAQGYVTMPNVNVTEEMVNMISASRAYQNNVETMNAAKTML 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 LKTLTI 132


>gi|120598230|ref|YP_962804.1| flagellar basal body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|146293692|ref|YP_001184116.1| flagellar basal body rod protein FlgC [Shewanella putrefaciens
           CN-32]
 gi|120558323|gb|ABM24250.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|145565382|gb|ABP76317.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
           CN-32]
 gi|319427091|gb|ADV55165.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens 200]
          Length = 138

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVR 62
           +A SG++ QS R+   + NIANA +   +     YR +   FE  M         S GV 
Sbjct: 9   VAGSGMSAQSVRLNTTASNIANADSVSSSI-DKTYRSRHPIFEAEMAKAQSQQQTSQGVT 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V+ I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q  + + 
Sbjct: 68  VRGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAK 127

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 128 SMLQQTLGM 136


>gi|218778520|ref|YP_002429838.1| flagellar basal-body rod protein FlgC [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759904|gb|ACL02370.1| Flagellar basal-body rod protein FlgC [Desulfatibacillum
           alkenivorans AK-01]
          Length = 142

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 12/139 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVM 55
           L+ + H + S L+V  A+M ++SEN+ANA TT  T    PY+RK +          E + 
Sbjct: 3   LLNAMHASASALSVSRAQMNVVSENLANANTT-RTANGQPYQRKFLVVSPAPVKEHENLS 61

Query: 56  HGSG---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
            G     GV++  I  DQS F   + P HP A+ +G ++ PNVNV+ E A+M    R+Y 
Sbjct: 62  VGEQVVEGVKLVDIVADQSPFPMVYRPEHPDADENGNLQLPNVNVVTEMANMLMAKRVYD 121

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           +N   +  +  M    L++
Sbjct: 122 SNAAALSTARSMALKALEI 140


>gi|42780837|ref|NP_978084.1| flagellar basal body rod protein FlgC [Bacillus cereus ATCC 10987]
 gi|222095368|ref|YP_002529428.1| flagellar basal body rod protein flgc [Bacillus cereus Q1]
 gi|229195957|ref|ZP_04322710.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1293]
 gi|42736757|gb|AAS40692.1| flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10987]
 gi|221239426|gb|ACM12136.1| flagellar basal-body rod protein FlgC [Bacillus cereus Q1]
 gi|228587516|gb|EEK45581.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1293]
          Length = 137

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHG--SGGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++    + GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDSAPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPNV+V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNVDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|163781740|ref|ZP_02176740.1| flagellar biosynthesis FlgC [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882960|gb|EDP76464.1| flagellar biosynthesis FlgC [Hydrogenivirga sp. 128-5-R1-1]
          Length = 137

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 8/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------EEV 54
           M+ L  +  I+ SG+  Q  RM  ++ N+AN      T   +P+R+  + F      E V
Sbjct: 1   MNDLFRTFEISASGMYAQRLRMNTVASNLANYEAYKQT--GEPFRKLEVVFQAIYNPERV 58

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
             G   V V +I    + F   +DP +P A+A G V+ PNV+++ E ADM    R Y AN
Sbjct: 59  KKGEIPVAVTQIRESDAPFKVIYDPDNPRADARGYVRLPNVDLVKEMADMISAVRSYEAN 118

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L     + DM   T++L R
Sbjct: 119 LNAFNLTKDMANRTIELWR 137


>gi|295399807|ref|ZP_06809788.1| flagellar basal-body rod protein FlgC [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312111681|ref|YP_003989997.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y4.1MC1]
 gi|294978210|gb|EFG53807.1| flagellar basal-body rod protein FlgC [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311216782|gb|ADP75386.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y4.1MC1]
          Length = 150

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 64/140 (45%), Gaps = 18/140 (12%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG--------- 57
           I  S L  Q  RM ++S N+AN  TT         +PYRRK +  E    G         
Sbjct: 9   ITASALTAQRLRMDVVSSNMANVDTTRARFVNGQWEPYRRKLVVMEPRQEGFSTYLQAAM 68

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  GGVRV KI  D + F   +DP HP A+ +G V+ PNV+ L E  D+    R Y
Sbjct: 69  NSRDSVGGGVRVTKIVEDPAPFKLVYDPSHPDADRNGYVRLPNVDPLKEMVDLMSATRSY 128

Query: 112 MANLQTIKQSHDMMTTTLDL 131
            AN+     +  M+   L++
Sbjct: 129 EANVTVFNATKGMLMKALEI 148


>gi|226939376|ref|YP_002794449.1| FlgC1 [Laribacter hongkongensis HLHK9]
 gi|226714302|gb|ACO73440.1| FlgC1 [Laribacter hongkongensis HLHK9]
          Length = 137

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 6/127 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV- 68
           IA S L  QS R+ +++ NIAN  +   + G +PY+ + I F  +       +V K+ V 
Sbjct: 9   IAGSALTAQSKRLNVVASNIANVDSAVASNG-EPYKARRIVFTPIPVSPAEPKVAKVAVT 67

Query: 69  ----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
               DQS     ++P HP+A+A+G V  PN+N + E  DM   +R Y  N++ +  +  +
Sbjct: 68  AIVEDQSPPRMNYNPAHPLADANGYVTMPNINPVEEMTDMISASRAYQTNVEMMNTTKQL 127

Query: 125 MTTTLDL 131
           +  TL +
Sbjct: 128 LQKTLSI 134


>gi|224825162|ref|ZP_03698268.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
 gi|224602833|gb|EEG09010.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
          Length = 136

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 6/127 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-----GGVRVK 64
           IA S L  QS R+ +++ NIANA +   + G  PY+ + + F  +   +      GVRV 
Sbjct: 9   IAGSALTAQSMRLNVVASNIANAESATSSTG-QPYQGRHVVFTAIPVSATQPQVAGVRVT 67

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D +    ++DPG+P+A+  G V  PNVN + E ADM    R Y  N++ +  + ++
Sbjct: 68  SVVEDTTPPRLKYDPGNPLADQRGYVNLPNVNPVEEMADMISAARSYQTNVELMNTAKNL 127

Query: 125 MTTTLDL 131
           +  TL L
Sbjct: 128 LQKTLQL 134


>gi|322432998|ref|YP_004210247.1| flagellar basal-body rod protein FlgC [Acidobacterium sp. MP5ACTX9]
 gi|321165225|gb|ADW70929.1| flagellar basal-body rod protein FlgC [Acidobacterium sp. MP5ACTX9]
          Length = 148

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 19/142 (13%)

Query: 9   HIANSGLAVQSARMQIISENIANARTT-GDTPGSDPYRRKTISFEEVMHGS--------- 58
            I+ S L+ +  R ++I+ N+ANA TT  DT G  P++RK + F      S         
Sbjct: 8   QISGSALSAERQRSEVIAANMANAETTHTDTGG--PFKRKEVVFSSASDSSFHLTFAKTG 65

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  G VR+ +I  D +  V  ++PGHP A+  G V YP +N + E  D+  + R Y
Sbjct: 66  GLSGKTPGTVRISQIVDDTAAPVMRYEPGHPDADKDGFVAYPAINPVQEMVDLMGSTRAY 125

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N   +  +  M+  ++D+L+
Sbjct: 126 QLNASAVSAAKQMIQQSIDILK 147


>gi|320173527|gb|EFW48723.1| Flagellar basal-body rod protein FlgC [Shigella dysenteriae CDC
           74-1112]
          Length = 134

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L  Q  R+ + + N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALTAQFQRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVNAAPGAATGGVKVAD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLTL 132


>gi|167639076|ref|ZP_02397349.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0193]
 gi|177650375|ref|ZP_02933342.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0174]
 gi|254734585|ref|ZP_05192297.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Western North America USA6153]
 gi|167512866|gb|EDR88239.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0193]
 gi|172083519|gb|EDT68579.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0174]
          Length = 137

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGS--GGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++  S   GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDRSPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|53717912|ref|YP_106898.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           K96243]
 gi|53724563|ref|YP_104796.1| flagellar basal body rod protein FlgC [Burkholderia mallei ATCC
           23344]
 gi|76809289|ref|YP_331878.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           1710b]
 gi|121599639|ref|YP_994289.1| flagellar basal body rod protein FlgC [Burkholderia mallei SAVP1]
 gi|124385719|ref|YP_001028062.1| flagellar basal body rod protein FlgC [Burkholderia mallei NCTC
           10229]
 gi|126439110|ref|YP_001057320.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|126450357|ref|YP_001082869.1| flagellar basal body rod protein FlgC [Burkholderia mallei NCTC
           10247]
 gi|126454889|ref|YP_001064562.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           1106a]
 gi|134283634|ref|ZP_01770333.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|167001534|ref|ZP_02267329.1| flagellar basal-body rod protein FlgC [Burkholderia mallei PRL-20]
 gi|167717658|ref|ZP_02400894.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           DM98]
 gi|167736701|ref|ZP_02409475.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           14]
 gi|167813799|ref|ZP_02445479.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           91]
 gi|167822316|ref|ZP_02453787.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei 9]
 gi|167843906|ref|ZP_02469414.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           B7210]
 gi|167892408|ref|ZP_02479810.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           7894]
 gi|167900906|ref|ZP_02488111.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           NCTC 13177]
 gi|167909125|ref|ZP_02496216.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           112]
 gi|167917162|ref|ZP_02504253.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           BCC215]
 gi|217424916|ref|ZP_03456412.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           576]
 gi|226199800|ref|ZP_03795351.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810459|ref|YP_002894910.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           MSHR346]
 gi|238562527|ref|ZP_00440313.2| flagellar basal-body rod protein FlgC [Burkholderia mallei GB8
           horse 4]
 gi|242316173|ref|ZP_04815189.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1106b]
 gi|254174790|ref|ZP_04881451.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
           10399]
 gi|254182142|ref|ZP_04888739.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1655]
 gi|254188072|ref|ZP_04894584.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254197006|ref|ZP_04903430.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           S13]
 gi|254201894|ref|ZP_04908258.1| flagellar basal-body rod protein FlgC [Burkholderia mallei FMH]
 gi|254207228|ref|ZP_04913579.1| flagellar basal-body rod protein FlgC [Burkholderia mallei JHU]
 gi|254258642|ref|ZP_04949696.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1710a]
 gi|254295812|ref|ZP_04963269.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
 gi|254359730|ref|ZP_04976001.1| flagellar basal-body rod protein FlgC [Burkholderia mallei
           2002721280]
 gi|42766726|gb|AAS45446.1| putative flagellar biosynthesis protein [Burkholderia pseudomallei]
 gi|52208326|emb|CAH34259.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243]
 gi|52427986|gb|AAU48579.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
           23344]
 gi|76578742|gb|ABA48217.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1710b]
 gi|121228449|gb|ABM50967.1| flagellar basal-body rod protein FlgC [Burkholderia mallei SAVP1]
 gi|124293739|gb|ABN03008.1| flagellar basal-body rod protein FlgC [Burkholderia mallei NCTC
           10229]
 gi|126218603|gb|ABN82109.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|126228531|gb|ABN92071.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1106a]
 gi|126243227|gb|ABO06320.1| flagellar basal-body rod protein FlgC [Burkholderia mallei NCTC
           10247]
 gi|134245043|gb|EBA45138.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|147747788|gb|EDK54864.1| flagellar basal-body rod protein FlgC [Burkholderia mallei FMH]
 gi|147752770|gb|EDK59836.1| flagellar basal-body rod protein FlgC [Burkholderia mallei JHU]
 gi|148028944|gb|EDK86876.1| flagellar basal-body rod protein FlgC [Burkholderia mallei
           2002721280]
 gi|157805705|gb|EDO82875.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
 gi|157935752|gb|EDO91422.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160695835|gb|EDP85805.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
           10399]
 gi|169653749|gb|EDS86442.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           S13]
 gi|184212680|gb|EDU09723.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1655]
 gi|217391936|gb|EEC31962.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           576]
 gi|225928151|gb|EEH24187.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504017|gb|ACQ96335.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           MSHR346]
 gi|238522487|gb|EEP85931.1| flagellar basal-body rod protein FlgC [Burkholderia mallei GB8
           horse 4]
 gi|242139412|gb|EES25814.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1106b]
 gi|243062736|gb|EES44922.1| flagellar basal-body rod protein FlgC [Burkholderia mallei PRL-20]
 gi|254217331|gb|EET06715.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1710a]
          Length = 141

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 12/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVM---------HGSG 59
           +A S ++ QS R+ + + N+ANA + TG  P   PY+ K + F              G G
Sbjct: 10  VAGSAMSAQSQRLNVTASNLANADSVTG--PDGKPYKAKQVVFATAPMGRARTASGQGVG 67

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V K+  D S     +DP +P A+ +G V  PNV+ + E  +M   +R Y AN++T+ 
Sbjct: 68  GVQVSKVIDDPSPMKTAYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSYQANVETLN 127

Query: 120 QSHDMMTTTLDL 131
            +  +M  TL +
Sbjct: 128 TAKQLMLKTLTI 139


>gi|302037602|ref|YP_003797924.1| flagellar basal-body rod protein FlgC [Candidatus Nitrospira
           defluvii]
 gi|300605666|emb|CBK41999.1| Flagellar basal-body rod protein FlgC [Candidatus Nitrospira
           defluvii]
          Length = 149

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 19/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-------------S 50
           L  S  ++ S L     R+ +I+ N+ANA++T  + G  PYRR+ +             +
Sbjct: 3   LTDSLAVSVSALDAHRHRLNVIASNLANAQSTKTSTGG-PYRRRDVVFQAAPVSPTFQKA 61

Query: 51  FEEVMHGSG-----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           F++V  G G     GV+V ++  D+      +DP HP A+  G V  PNVNV+ E  +M 
Sbjct: 62  FKQVTSGPGRQALDGVKVARVIEDKKPGQTVYDPRHPDADKKGFVTMPNVNVMEEMVNMI 121

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +R Y AN+Q I  +  M    L++ R
Sbjct: 122 GASRAYEANVQAINATRTMWNRALEIGR 149


>gi|186477695|ref|YP_001859165.1| flagellar basal body rod protein FlgC [Burkholderia phymatum
           STM815]
 gi|184194154|gb|ACC72119.1| flagellar basal-body rod protein FlgC [Burkholderia phymatum
           STM815]
          Length = 141

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 12/141 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANA-RTTGDTPGSDPYRRKTISFEEVMHGS- 58
           M  L+   ++A S ++ QS R+ + + N+ANA  TTG  P   PY+ K + F     G  
Sbjct: 1   MPSLMNIFNVAGSAMSAQSQRLNVTASNLANADSTTG--PDGKPYKAKQVVFAVNPIGGA 58

Query: 59  --------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                   GGV+V  +  D +     ++PG+P A+A+G V+ PNV+ + E  +M   +R 
Sbjct: 59  RTGSGQQVGGVQVTGVIDDPTPMKTSYEPGNPAADANGYVQLPNVDPVQEMVNMISASRS 118

Query: 111 YMANLQTIKQSHDMMTTTLDL 131
           Y AN++T+  +  +M  TL +
Sbjct: 119 YQANVETLNTAKQLMLKTLTI 139


>gi|168180911|ref|ZP_02615575.1| flagellar basal-body rod protein FlgC [Clostridium botulinum NCTC
           2916]
 gi|182668190|gb|EDT80169.1| flagellar basal-body rod protein FlgC [Clostridium botulinum NCTC
           2916]
          Length = 144

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 67/135 (49%), Gaps = 13/135 (9%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-----GGVRV 63
            I+ SGL+ +  RM  I+ NIANA TT  T    PY+RK   FEE ++       G    
Sbjct: 9   RISASGLSAERLRMDTIASNIANATTT-RTENGGPYKRKIAVFEENLNNELNKKNGATEK 67

Query: 64  KKIGVDQSTFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           K  GV  +  VE+       +DP HP A+  G V  PNVNVL E ADM  + R Y AN+ 
Sbjct: 68  KLYGVKATGIVEDPSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRTYEANVT 127

Query: 117 TIKQSHDMMTTTLDL 131
            +     M    L++
Sbjct: 128 VMNAEKSMFGKALEI 142


>gi|261856362|ref|YP_003263645.1| flagellar basal-body rod protein FlgC [Halothiobacillus
           neapolitanus c2]
 gi|261836831|gb|ACX96598.1| flagellar basal-body rod protein FlgC [Halothiobacillus
           neapolitanus c2]
          Length = 133

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 3/130 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L +  ++++S ++ QS R+   + N+ANA      P  D Y+ +   F++VM  +GGV V
Sbjct: 3   LFSIFNVSSSAMSAQSLRLNATASNMANADAVATKP-EDAYKAREPVFQQVMEQNGGVGV 61

Query: 64  KKIGVDQSTFVEE--FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +  G+ QST      ++PG+P+AN  G V   NVN + E  +M   +R Y  N+Q +  +
Sbjct: 62  RVSGITQSTAPNPALYEPGNPLANKDGYVYSSNVNPVEEMVNMLSASRSYQTNVQMMDTA 121

Query: 122 HDMMTTTLDL 131
            ++   TL L
Sbjct: 122 KNLALRTLQL 131


>gi|126653751|ref|ZP_01725669.1| flagellar basal-body rod protein C [Bacillus sp. B14905]
 gi|126589715|gb|EAZ83851.1| flagellar basal-body rod protein C [Bacillus sp. B14905]
          Length = 153

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 27/143 (18%)

Query: 13  SGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTISF--------------- 51
           S L  Q  RM +IS N+AN  TT      G+    +PYRRK+++F               
Sbjct: 12  SALTAQRLRMDVISSNMANMDTTRARQVNGEW---EPYRRKSVTFTAQEGQFSKFMNVAL 68

Query: 52  -EEVMHGSG-GVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            ++   G G GV+V +I  D+ T F   +DP HP ANA G V  PNV+ L E  D+    
Sbjct: 69  GKDAKSGVGNGVKVTRIAEDRETPFKLVYDPTHPDANADGYVNLPNVDPLKEMVDLMSAT 128

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN+     +  M+T  L++
Sbjct: 129 RSYEANVTVFNANKSMLTKALEI 151


>gi|167835109|ref|ZP_02461992.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           MSMB43]
          Length = 141

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 12/141 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVM---- 55
           M  L+    +A S ++ QS R+ + + N+ANA + TG  P   PY+ K + F        
Sbjct: 1   MPSLMNIFDVAGSAMSAQSQRLNVTASNLANADSVTG--PDGKPYKAKQVVFATAPMGRA 58

Query: 56  -----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                 G GGV+V K+  D S     +DP +P A+ +G V  PNV+ + E  +M   +R 
Sbjct: 59  RTASGQGVGGVQVTKVVDDPSPMKTTYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRS 118

Query: 111 YMANLQTIKQSHDMMTTTLDL 131
           Y AN++T+  +  +M  TL +
Sbjct: 119 YQANVETLNTAKQLMLKTLTI 139


>gi|325109010|ref|YP_004270078.1| flagellar basal-body rod protein FlgC [Planctomyces brasiliensis
           DSM 5305]
 gi|324969278|gb|ADY60056.1| flagellar basal-body rod protein FlgC [Planctomyces brasiliensis
           DSM 5305]
          Length = 133

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 3/126 (2%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISF--EEVMHGSGGVRVKKI 66
           I  SGL  Q  R+  I+EN+AN +TT D  G+  P++R+ ++F  +     + GV+ +  
Sbjct: 7   IITSGLVAQRQRLNTIAENVANQQTTRDAEGNVSPFQRRFVTFAADSDSTEAAGVKFEVE 66

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             DQ+     ++PGHP ANA G V YP +N++ E  +  E +R Y AN+ +   +  +  
Sbjct: 67  KDDQTPPRLVYEPGHPDANAEGYVAYPAINMVTEFVNAMEASRAYEANVVSFSTTQKIGE 126

Query: 127 TTLDLL 132
             L +L
Sbjct: 127 MALRIL 132


>gi|153001474|ref|YP_001367155.1| flagellar basal body rod protein FlgC [Shewanella baltica OS185]
 gi|160876205|ref|YP_001555521.1| flagellar basal body rod protein FlgC [Shewanella baltica OS195]
 gi|151366092|gb|ABS09092.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS185]
 gi|160861727|gb|ABX50261.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS195]
 gi|315268395|gb|ADT95248.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS678]
          Length = 138

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVR 62
           +A SG++ QS R+   + NIANA +   +     YR +   FE  M         S GV 
Sbjct: 9   VAGSGMSAQSVRLNTTASNIANADSVSSSV-DKTYRSRHPIFEAEMAKAQSQQQASQGVA 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q  + + 
Sbjct: 68  VKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAK 127

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 128 SMLQQTLGM 136


>gi|70731825|ref|YP_261567.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
           Pf-5]
 gi|68346124|gb|AAY93730.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens
           Pf-5]
          Length = 147

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGG------ 60
           +IA SG++ Q+ R+  ++ NIANA +   +     YR +   F  +  G  SGG      
Sbjct: 8   NIAGSGMSAQTTRLNTVASNIANAESVSSSI-DQTYRARHPVFATMFQGAQSGGSDSLFQ 66

Query: 61  --------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                   V+V  +  DQS     ++P HP A+A G V YPNVNV+ E ADM   +R + 
Sbjct: 67  NQDAAGQGVQVLGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMISASRSFQ 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N + +  +  MM   L L
Sbjct: 127 TNAEMMNTAKTMMQKVLTL 145


>gi|224373713|ref|YP_002608085.1| flagellar basal body rod protein FlgC [Nautilia profundicola AmH]
 gi|223589296|gb|ACM93032.1| flagellar basal-body rod protein FlgC [Nautilia profundicola AmH]
          Length = 165

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 34/163 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----------EE 53
              S  I+  GL+ Q  R+ IISENIANA TT    G  PYRRK + F          +E
Sbjct: 3   FFNSFDISGYGLSAQRFRINIISENIANANTTRTDEGG-PYRRKEVIFKAVPFEEQLNQE 61

Query: 54  VMHGSG-------------GVRVKKIGVD----------QSTFVEEFDPGHPVANASGIV 90
           +   S                 V K  ++           S  + ++DP +P A+A+G V
Sbjct: 62  IEQNSKFHQYENPLDEEGENYAVAKPPIETVVVDKVVRDDSKPILKYDPSNPDADANGYV 121

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            YPN+N ++E AD+ E  R Y AN+   + +  M  + +++L+
Sbjct: 122 AYPNINPVIEMADLLEATRAYQANVAAFQSAKTMANSAINILQ 164


>gi|320535379|ref|ZP_08035493.1| flagellar basal-body rod protein FlgC [Treponema phagedenis F0421]
 gi|320147781|gb|EFW39283.1| flagellar basal-body rod protein FlgC [Treponema phagedenis F0421]
          Length = 152

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 20/150 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           + +S +IA +G++ +  R  +IS+NIANA +T    G  P++R  +   E          
Sbjct: 3   MFSSINIAATGMSAERLRTDVISDNIANASSTRTQEGEGPFKRSRVILSEKNPEVTWRTP 62

Query: 54  -----VMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANAS----GIVKYPNVNVLVETAD 103
                +  G G GVRV  I  D +     +DP HP A  S    G V+YPNVN++ E  D
Sbjct: 63  FVPDTIDKGVGTGVRVVSIEKDNAPSRLVYDPNHPDAIKSGPNAGYVEYPNVNIVTEMVD 122

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y AN   I  S +M    L++ R
Sbjct: 123 LISASRAYEANASVILGSKEMFQRALEIGR 152


>gi|126668556|ref|ZP_01739510.1| flagellar basal-body rod protein C [Marinobacter sp. ELB17]
 gi|126626961|gb|EAZ97604.1| flagellar basal-body rod protein C [Marinobacter sp. ELB17]
          Length = 147

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 14/136 (10%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------------SFEEVM 55
           IA SG+  QS R+   + NIANA T   + G     RK +              +F    
Sbjct: 9   IAGSGMTAQSLRLNTTASNIANAETASSSTGETYRARKPVFAAVQQSLLNGNQPAFGSGA 68

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
            G  GVRV+ I    +     ++P HP A+  G V YPNVNV  E ADM  ++R +  N+
Sbjct: 69  EGGAGVRVEGIVESDADLQMRYEPNHPAASEDGYVYYPNVNVAEEMADMMSSSRSFQMNV 128

Query: 116 QTIKQSHDMMTTTLDL 131
             +  +  MM   L L
Sbjct: 129 DIMNTAKSMMQRILTL 144


>gi|126175148|ref|YP_001051297.1| flagellar basal body rod protein FlgC [Shewanella baltica OS155]
 gi|125998353|gb|ABN62428.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
          Length = 138

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVR 62
           +A SG++ QS R+   + NIANA +   +     YR +   FE  M         S GV 
Sbjct: 9   VAGSGMSAQSVRLNTTASNIANADSVSSSV-DKTYRARHPIFEAEMAKAQSQQQASQGVA 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q  + + 
Sbjct: 68  VKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAK 127

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 128 SMLQQTLGM 136


>gi|113969604|ref|YP_733397.1| flagellar basal body rod protein FlgC [Shewanella sp. MR-4]
 gi|114046836|ref|YP_737386.1| flagellar basal body rod protein FlgC [Shewanella sp. MR-7]
 gi|113884288|gb|ABI38340.1| flagellar basal-body rod protein FlgC [Shewanella sp. MR-4]
 gi|113888278|gb|ABI42329.1| flagellar basal-body rod protein FlgC [Shewanella sp. MR-7]
          Length = 138

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVR 62
           +A SG++ QS R+   + NIANA +   +     YR +   FE  M         S GV 
Sbjct: 9   VAGSGMSAQSVRLNTTASNIANADSVSSSI-DKTYRSRHPIFEAEMAKAQSQQQASQGVA 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q  + + 
Sbjct: 68  VKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAK 127

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 128 SMLQQTLGM 136


>gi|167568105|ref|ZP_02361021.1| flagellar basal body rod protein FlgC [Burkholderia oklahomensis
           EO147]
 gi|167574223|ref|ZP_02367097.1| flagellar basal body rod protein FlgC [Burkholderia oklahomensis
           C6786]
          Length = 141

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 12/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVM---------HGSG 59
           +A S ++ QS R+ + + N+ANA + TG  P   PY+ K + F              G G
Sbjct: 10  VAGSAMSAQSQRLNVTASNLANADSVTG--PDGKPYKAKQVVFATAPMGRARTASGQGVG 67

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V K+  D S     +DP +P A+ +G V  PNV+ + E  +M   +R Y AN++T+ 
Sbjct: 68  GVQVTKVIDDPSPMKTAYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSYQANVETLN 127

Query: 120 QSHDMMTTTLDL 131
            +  +M  TL +
Sbjct: 128 TAKQLMLKTLTI 139


>gi|238919257|ref|YP_002932772.1| flagellar basal-body rod protein FlgC, [Edwardsiella ictaluri
           93-146]
 gi|238868826|gb|ACR68537.1| flagellar basal-body rod protein FlgC, putative [Edwardsiella
           ictaluri 93-146]
          Length = 134

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 14/136 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISF-------EEVM 55
           L++   I+ S L  QS RM + + N+ANA + TG  P   PY  K + F       EE+ 
Sbjct: 3   LLSIFDISGSALTAQSERMNVAASNMANADSVTG--PDGQPYHAKQVVFQVNPAAGEEI- 59

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
              GGVRV +I  D +     + PG+P+A+A G V+ PNV+V+ E  +    +R Y AN+
Sbjct: 60  ---GGVRVSQIVEDPAPERLVYQPGNPLADAKGYVRMPNVDVVSEMVNSIAASRSYQANV 116

Query: 116 QTIKQSHDMMTTTLDL 131
           + +  +  +M  TL L
Sbjct: 117 EVLNTTKSLMMKTLTL 132


>gi|169827118|ref|YP_001697276.1| flagellar basal body rod protein FlgC [Lysinibacillus sphaericus
           C3-41]
 gi|168991606|gb|ACA39146.1| Flagellar basal-body rod protein [Lysinibacillus sphaericus C3-41]
          Length = 153

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 27/143 (18%)

Query: 13  SGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTISF--------------- 51
           S L  Q  RM +IS N+AN  TT      G+    +PYRRK+++F               
Sbjct: 12  SALTAQRLRMDVISSNMANMDTTRARQVNGEW---EPYRRKSVTFTAQEGQFSKFMNVAL 68

Query: 52  -EEVMHGSG-GVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            ++   G G GV+V +I  D+ T F   +DP HP ANA G V  PNV+ L E  D+    
Sbjct: 69  GKDAKSGVGNGVKVTRISEDRETPFKLVYDPTHPDANADGYVNLPNVDPLKEMVDLMSAT 128

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN+     +  M+T  L++
Sbjct: 129 RSYEANVTVFNANKSMLTKALEI 151


>gi|83720057|ref|YP_440799.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|167579486|ref|ZP_02372360.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           TXDOH]
 gi|167617583|ref|ZP_02386214.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           Bt4]
 gi|257140550|ref|ZP_05588812.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|83653882|gb|ABC37945.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
          Length = 141

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 12/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVM---------HGSG 59
           +A S ++ QS R+ + + N+ANA + TG  P   PY+ K + F              G G
Sbjct: 10  VAGSAMSAQSQRLNVTASNLANADSVTG--PDGKPYKAKQVVFATAPMGGARTASGQGVG 67

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V K+  D S     +DP +P A+ +G V  PNV+ + E  +M   +R Y AN++T+ 
Sbjct: 68  GVQVTKVIDDPSPMKTTYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSYQANVETLN 127

Query: 120 QSHDMMTTTLDL 131
            +  +M  TL +
Sbjct: 128 TAKQLMLKTLTI 139


>gi|217972596|ref|YP_002357347.1| flagellar basal body rod protein FlgC [Shewanella baltica OS223]
 gi|304409980|ref|ZP_07391599.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|307302307|ref|ZP_07582065.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
 gi|217497731|gb|ACK45924.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS223]
 gi|304351389|gb|EFM15788.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|306914345|gb|EFN44766.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
          Length = 138

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVR 62
           +A SG++ QS R+   + NIANA +   +     YR +   FE  M         S GV 
Sbjct: 9   VAGSGMSAQSVRLNTTASNIANADSVSSSV-DKTYRSRHPIFEAEMAKAQSQQQASQGVA 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q  + + 
Sbjct: 68  VKGIVESDRPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAK 127

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 128 SMLQQTLGM 136


>gi|154686035|ref|YP_001421196.1| flagellar basal body rod protein FlgC [Bacillus amyloliquefaciens
           FZB42]
 gi|154351886|gb|ABS73965.1| FlgC [Bacillus amyloliquefaciens FZB42]
          Length = 150

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 73/146 (50%), Gaps = 24/146 (16%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTIS-------FEE 53
           S +I+ S L  Q  RM ++S N+AN  TT      G+     PYRRK +S       F  
Sbjct: 6   SLNISGSALTAQRVRMDVVSSNLANMDTTRAKQVNGEWV---PYRRKLVSLQSGGESFSS 62

Query: 54  VMH----GSG----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           ++H    G+G    GV+V  +  D S F   +DP +P AN  G V+ PNV+ L E  D+ 
Sbjct: 63  LLHSKMNGTGSAGNGVKVSGVTEDPSAFNLVYDPENPDANKDGYVQKPNVDPLKEMVDLV 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDL 131
            + R Y AN+  +  S  M+   L++
Sbjct: 123 SSTRSYEANVTALNASKGMLLKALEI 148


>gi|91792662|ref|YP_562313.1| flagellar basal body rod protein FlgC [Shewanella denitrificans
           OS217]
 gi|91714664|gb|ABE54590.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
           OS217]
          Length = 138

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------GSGGVR 62
           ++ SG+A QS R+   + NIANA +   +     YR +   FE  ++       G+ GV+
Sbjct: 9   VSGSGMAAQSIRLNTTASNIANADSVSSSV-DKTYRARHPIFEAELNKAHDQQNGTKGVQ 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V+ I       ++E+ P HP+A+  G +  PNVNV+ E ADM   +R Y  N+Q    + 
Sbjct: 68  VRAIVESDKPLLKEYSPSHPMADGDGFIYKPNVNVMEEMADMISASRSYQMNVQVADATK 127

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 128 TMLQQTLRM 136


>gi|117919770|ref|YP_868962.1| flagellar basal body rod protein FlgC [Shewanella sp. ANA-3]
 gi|117612102|gb|ABK47556.1| flagellar basal-body rod protein FlgC [Shewanella sp. ANA-3]
          Length = 138

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVR 62
           +A SG++ QS R+   + NIANA +   +     YR +   FE  M         S GV 
Sbjct: 9   VAGSGMSAQSLRLNTTASNIANADSVSSSV-DKTYRSRHPIFEAEMAKAQSQQQASQGVT 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q  + + 
Sbjct: 68  VKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAK 127

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 128 SMLQQTLGM 136


>gi|292489135|ref|YP_003532022.1| flagellar basal-body rod protein FlgC [Erwinia amylovora CFBP1430]
 gi|292900254|ref|YP_003539623.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291200102|emb|CBJ47228.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291554569|emb|CBA22184.1| Flagellar basal-body rod protein flgC [Erwinia amylovora CFBP1430]
 gi|312173293|emb|CBX81548.1| Flagellar basal-body rod protein flgC [Erwinia amylovora ATCC
           BAA-2158]
          Length = 134

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGS--GG 60
           L +   I+ S +A QS R+ + + N+ANA  +   P   PYR + ++FE +   G+  GG
Sbjct: 3   LFSVFDISGSAMAAQSKRLNVSASNMANA-DSAVGPDGQPYRARQVTFEVDAAAGNEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++    +     ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  
Sbjct: 62  VKVGEVVESSAPDRLVYEPGNPLADQQGYVRMPNVNVVDEMVNTLSASRSYQANVEVMNS 121

Query: 121 SHDMMTTTLDL 131
           +  MM  TL L
Sbjct: 122 AKAMMLKTLSL 132


>gi|187778746|ref|ZP_02995219.1| hypothetical protein CLOSPO_02341 [Clostridium sporogenes ATCC
           15579]
 gi|187772371|gb|EDU36173.1| hypothetical protein CLOSPO_02341 [Clostridium sporogenes ATCC
           15579]
          Length = 153

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 19/138 (13%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---------------EE 53
            I+ SGL+ +  RM  I+ NIANA TT  T    PY+RK   F               E+
Sbjct: 18  RISASGLSAERLRMDTIASNIANATTT-RTENGGPYKRKIAVFEENLNNELNKKNGTNEK 76

Query: 54  VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
            ++G   V+   I  D S   + +DP HP A+A G V  PNVNVL E ADM  + R Y A
Sbjct: 77  KLYG---VKATGIVEDSSPVRKMYDPSHPDADAEGYVSMPNVNVLNEMADMMASVRTYEA 133

Query: 114 NLQTIKQSHDMMTTTLDL 131
           ++  +     M    L++
Sbjct: 134 SVTVMNAEKSMFGKALEI 151


>gi|259907632|ref|YP_002647988.1| Flagellar basal-body rod protein, FlgC [Erwinia pyrifoliae Ep1/96]
 gi|224963254|emb|CAX54738.1| Flagellar basal-body rod protein, FlgC [Erwinia pyrifoliae Ep1/96]
 gi|283477474|emb|CAY73390.1| Flagellar basal-body rod protein flgC [Erwinia pyrifoliae DSM
           12163]
 gi|310764862|gb|ADP09812.1| Flagellar basal-body rod protein, FlgC [Erwinia sp. Ejp617]
          Length = 134

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGS--GG 60
           L +   I+ S +A QS R+ + + N+ANA +    P   PYR + ++FE +   G+  GG
Sbjct: 3   LFSVFDISGSAMAAQSKRLNVSASNMANADSV-VGPDGQPYRARQVTFEVDAAAGNEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++    +     ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  
Sbjct: 62  VKVGEVVESSAPDRLVYEPGNPLADQQGYVRMPNVNVVDEMVNTLSASRSYQANVEVMNS 121

Query: 121 SHDMMTTTLDL 131
           +  MM  TL L
Sbjct: 122 AKAMMLKTLSL 132


>gi|240145509|ref|ZP_04744110.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           L1-82]
 gi|257202324|gb|EEV00609.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           L1-82]
 gi|291536000|emb|CBL09112.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           M50/1]
 gi|291538494|emb|CBL11605.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           XB6B4]
          Length = 146

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L  +  I+ SG+  +  RM  I++NIAN  TT    G+ PYRRK ++F E          
Sbjct: 3   LFQAFDISASGMTAERFRMDTIAQNIANINTTRTEDGT-PYRRKIVTFAEKTETPFSQYY 61

Query: 58  --------SGGVRVKKIGVDQSTFVEE-FDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GV+V  +  D  T +   +DP HP A+ +G V YPNVN + E  ++ +  
Sbjct: 62  ETARARAVGNGVKVTSVKEDDETEMRMVYDPSHPDADENGYVTYPNVNTVTEMTNLIDAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN      +  M+   L++ +
Sbjct: 122 RAYEANTTAFDATKSMVQAALNISK 146


>gi|42526722|ref|NP_971820.1| flagellar basal body rod protein FlgC [Treponema denticola ATCC
           35405]
 gi|41817037|gb|AAS11731.1| flagellar basal-body rod protein FlgC [Treponema denticola ATCC
           35405]
          Length = 151

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-------------- 49
           L  S +IA +G+ V+  R  +IS NIANA +  +T    P++R  +              
Sbjct: 3   LFTSINIAATGMGVERLRTDVISNNIANASSL-ETQEGGPFKRSRVIVGQKKSGIDWQTP 61

Query: 50  -SFEEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
            + + V  G G GV+V  I  D S     +DP HP A       G V+YPNVN++ E  D
Sbjct: 62  FTPQNVERGVGEGVKVLSIEKDTSDTRWVYDPTHPKALKYGPKEGYVEYPNVNIVTEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y ANL  +  + DM    LD+ R
Sbjct: 122 LISASRAYEANLAVVNGAKDMFQRALDIAR 151


>gi|167623359|ref|YP_001673653.1| flagellar basal body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
 gi|167353381|gb|ABZ75994.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
          Length = 138

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-----HGSGGVRV 63
           ++A SG++ QS R+   + NIANA +   + G + YR +   FE  M     H S    V
Sbjct: 8   NVAGSGMSAQSVRLNTTASNIANADSVSSSVG-ETYRARHPIFEAEMSKAQQHQSASASV 66

Query: 64  KKIGVDQSTFV--EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
              G+ +S     +EF P HP+A+  G +  PNVNV+ E A+M   +R Y  N+Q  + +
Sbjct: 67  AVKGIVESDLPLNKEFSPDHPMADTDGFIYKPNVNVMEEMANMISASRSYQMNVQVTEAA 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KSMLQQTLRI 136


>gi|255021352|ref|ZP_05293400.1| Flagellar basal-body rod protein flgC [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969215|gb|EET26729.1| Flagellar basal-body rod protein flgC [Acidithiobacillus caldus
           ATCC 51756]
          Length = 138

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           +A+S L  QS R+ +++ N+ANA +   + G  PYR + + F      SG       GV 
Sbjct: 9   VASSALTAQSYRLNVVASNLANANSATSSDG-QPYRAREVVFAATPLHSGQAPAGVEGVQ 67

Query: 70  QSTFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +  VE+       ++PG+P ANA G V+ PNVN + E  +M   +R Y AN+  +  + 
Sbjct: 68  VAGVVEKPGPLKLVYEPGNPAANAEGYVQMPNVNPVDEMVNMISASRAYQANVNVMNTTK 127

Query: 123 DMMTTTLDL 131
            ++  TL L
Sbjct: 128 ALLQKTLTL 136


>gi|1448943|gb|AAB04619.1| flagellar basal body distal rod protein [Borrelia burgdorferi]
          Length = 152

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD---------------PYRRKT 48
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP  D               PY +  
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGDLIEGQRIIFAPRVNNPYWKGP 61

Query: 49  ISFEEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETAD 103
              + + +G G GVRV  I  D+S    ++DP HP + +SG     V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|157692298|ref|YP_001486760.1| flagellar basal body rod protein FlgC [Bacillus pumilus SAFR-032]
 gi|157681056|gb|ABV62200.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032]
          Length = 150

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 18/146 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT--GDTPGS-DPYRRKTI-------SFEE 53
           + +  + + S L  Q  RM ++S N+AN  TT      G+ +PYRRK +       SF  
Sbjct: 3   IFSGVNASASALTAQRLRMDVVSSNLANMDTTRAKQVDGNWEPYRRKLVTLQPSGESFSS 62

Query: 54  VMHGS--------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           +++ S         GV+  KI  D++ F  ++DP +P AN +G V+ PNV+ L E  D+ 
Sbjct: 63  ILNSSMNSSGKLGNGVKATKITEDETPFNLQYDPTNPDANENGYVQTPNVDPLKEMVDLI 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++R Y AN+  +  +  M+   L++
Sbjct: 123 SSSRSYEANVTALNANKSMLMKALEI 148


>gi|228984828|ref|ZP_04145000.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228775026|gb|EEM23420.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 137

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGS--GGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++  S   GV +K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDRSPANGVNIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|167630287|ref|YP_001680786.1| flagellar basal-body rod protein flgc, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167593027|gb|ABZ84775.1| flagellar basal-body rod protein flgc, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 159

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 69/154 (44%), Gaps = 26/154 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT----GDTPGSDPYRRK----------TI 49
            ++S   + SGL  Q  RM IIS N+AN  TT     D  G  PYRR+            
Sbjct: 3   FLSSIDTSASGLTAQRFRMDIISNNLANVNTTRTGNSDADGVLPYRRQIPVFAARQAEAD 62

Query: 50  SFEEVMHGS--------GGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNV 97
           +F   +  +        GGVRV  +  D+S F   +DP HP A      +G V+ PNVN 
Sbjct: 63  TFASALSAAENRRNATGGGVRVVAVAEDESAFKMIYDPQHPDAIRTGPLTGYVRMPNVNT 122

Query: 98  LVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           + E  DM    R Y AN+  I  +  M    L++
Sbjct: 123 VTEMVDMISATRAYEANVTAINAAKSMAMKALEI 156


>gi|227873538|ref|ZP_03991783.1| flagellar basal body rod protein [Oribacterium sinus F0268]
 gi|227840628|gb|EEJ51013.1| flagellar basal body rod protein [Oribacterium sinus F0268]
          Length = 136

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 19/135 (14%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVM----HGSG--- 59
           ++ Q  RM I +ENIAN  TT    GS  Y+RK +        SF++ +    +G G   
Sbjct: 1   MSAQRVRMDIAAENIANVDTTRTEAGS-AYKRKDVVLESFGERSFQQALRNAQNGKGFRG 59

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GVRV+ +  D       ++P HP A+A G V YPNV++L ET D     R Y AN+ 
Sbjct: 60  QHAGVRVQGVITDDREMKRVYNPNHPDADAQGYVNYPNVDILKETVDSMSATRSYEANVT 119

Query: 117 TIKQSHDMMTTTLDL 131
            +     M    LD+
Sbjct: 120 ALNAMKTMAQRALDI 134


>gi|119953092|ref|YP_945301.1| flagellar basal body rod protein FlgC [Borrelia turicatae 91E135]
 gi|119861863|gb|AAX17631.1| flagellar basal-body rod protein FlgC [Borrelia turicatae 91E135]
          Length = 152

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 21/151 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
           L +S + A +GL  Q  R+ +I+ NIAN  TT  + G   YRR+ I F   +        
Sbjct: 3   LFSSINTAATGLTAQRLRLDVIANNIANVETTRTSEGGS-YRRQRIVFSPRVVSPYWKGP 61

Query: 56  -------HGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETAD 103
                  +G G GVRV  I  D+S    ++DP HP A  SG     V++PNVN + E  D
Sbjct: 62  FVPDYLDNGIGQGVRVAGIERDKSPLKLKYDPTHPDAIKSGERKGYVEFPNVNAVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           M   +R Y AN   I  S  +  + L +L++
Sbjct: 122 MISASRAYEANSTVINSSKAIFRSALSILQN 152


>gi|330811237|ref|YP_004355699.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379345|gb|AEA70695.1| Putative flagellar basal-body rod protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 147

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 27/144 (18%)

Query: 9   HIANSGLAVQSARMQIISENIANARTT---------------------GDTPGSDPYRRK 47
           +IA S ++ Q+ R+  ++ NIANA T                      G + GSD     
Sbjct: 8   NIAGSAMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSDSL--- 64

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
              F+E      GV+V  +  DQS     ++P HP A+A G V YPNVNV+ E ADM   
Sbjct: 65  ---FQEQDAAGQGVQVLGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
           +R +  N + +  +  MM   L L
Sbjct: 122 SRSFQTNAEMMNTAKTMMQKVLTL 145


>gi|255028426|ref|ZP_05300377.1| flagellar basal body rod protein FlgC [Listeria monocytogenes LO28]
          Length = 124

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 7/116 (6%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGSGGVRVKKIGVDQSTFVE 75
           M++ S NIANA ++   PG  P+ RK +       FE  + G+ GV+V +I  D  +   
Sbjct: 7   MEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTGTKGVKVSEISSDTGSVKR 65

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +DP HP AN +G V Y NV++  E  ++    ++Y AN   ++ +  MM   L++
Sbjct: 66  VYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEKDLEI 121


>gi|168183267|ref|ZP_02617931.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Bf]
 gi|170756841|ref|YP_001782281.1| flagellar basal body rod protein FlgC [Clostridium botulinum B1
           str. Okra]
 gi|226950077|ref|YP_002805168.1| flagellar basal body rod protein FlgC [Clostridium botulinum A2
           str. Kyoto]
 gi|237796104|ref|YP_002863656.1| flagellar basal body rod protein FlgC [Clostridium botulinum Ba4
           str. 657]
 gi|169122053|gb|ACA45889.1| flagellar basal-body rod protein FlgC [Clostridium botulinum B1
           str. Okra]
 gi|182673715|gb|EDT85676.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Bf]
 gi|226841648|gb|ACO84314.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A2
           str. Kyoto]
 gi|229263476|gb|ACQ54509.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Ba4
           str. 657]
          Length = 144

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 67/135 (49%), Gaps = 13/135 (9%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-----GGVRV 63
            I+ SGL+ +  RM  I+ NI+NA TT  T    PY+RK   FEE ++       G    
Sbjct: 9   RISASGLSAERLRMDTIASNISNATTT-RTENGGPYKRKIAVFEENLNNELNKKNGATEK 67

Query: 64  KKIGVDQSTFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           K  GV  +  VE+       +DP HP A+  G V  PNVNVL E ADM  + R Y AN+ 
Sbjct: 68  KLYGVKATGIVEDSSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRTYEANVT 127

Query: 117 TIKQSHDMMTTTLDL 131
            +     M    L++
Sbjct: 128 VMNAEKSMFGKALEI 142


>gi|145298489|ref|YP_001141330.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851261|gb|ABO89582.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 139

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 6/128 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---SFEEVM---HGSGGVRV 63
           IA S ++ QS R+  ++ N+ANA +   +     + R+ I     ++ M     S GV V
Sbjct: 9   IAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARRPIFAAQLDQAMSDKQSSVGVEV 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           K I   ++  ++E++P HP+A+  G +  PNVN++ E ADM   +R Y  N+Q    +  
Sbjct: 69  KGIVESKAPLLKEYNPNHPMADDDGYIFKPNVNMVEEMADMINASRSYQTNVQVADSAKK 128

Query: 124 MMTTTLDL 131
           M+  TL+L
Sbjct: 129 MLQQTLNL 136


>gi|329297212|ref|ZP_08254548.1| flagellar basal body rod protein FlgC [Plautia stali symbiont]
          Length = 134

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKK 65
           IA S +  QS R+ + + N+ NA + TG  P   PY  K + F+ +   G+  GGV+V  
Sbjct: 9   IAGSAMTAQSQRLNVSASNLDNADSVTG--PDGQPYVAKQVIFQTDAAQGAATGGVKVAG 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D +     +DPG+P+A+  G VK PNV+V+ ET +    +R Y AN++ +     MM
Sbjct: 67  VVNDPTPAKLVYDPGNPLADQKGYVKMPNVDVVAETVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 MKTLTM 132


>gi|194015045|ref|ZP_03053662.1| flagellar basal-body rod protein FlgC [Bacillus pumilus ATCC 7061]
 gi|194014071|gb|EDW23636.1| flagellar basal-body rod protein FlgC [Bacillus pumilus ATCC 7061]
          Length = 150

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 18/146 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT--GDTPGS-DPYRRKTI-------SFEE 53
           + +  + + S L  Q  RM ++S N+AN  TT      G+ +PYRRK +       SF  
Sbjct: 3   IFSGVNASASALTAQRLRMDVVSSNLANMDTTRAKQVDGNWEPYRRKLVTLQPSGESFSS 62

Query: 54  V----MHGSG----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           +    M+ SG    GV+  KI  D++ F  ++DP +P AN +G V+ PNV+ L E  D+ 
Sbjct: 63  ILNSNMNSSGKLGNGVKATKITEDETPFNLQYDPTNPDANENGYVQTPNVDPLKEMVDLI 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++R Y AN+  +  +  M+   L++
Sbjct: 123 SSSRSYEANVTALNANKSMLMKALEI 148


>gi|89098646|ref|ZP_01171528.1| flagellar basal-body rod protein C [Bacillus sp. NRRL B-14911]
 gi|89086608|gb|EAR65727.1| flagellar basal-body rod protein C [Bacillus sp. NRRL B-14911]
          Length = 149

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 69/145 (47%), Gaps = 17/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT-GDTPGSD--PYRRKTI----------S 50
           +  S +  +S L  Q  RM +IS N+AN  +T G     +  PY RK +          S
Sbjct: 3   MFHSMNTTSSALTAQRLRMDVISSNMANVDSTRGKLVNGEWQPYTRKEVVMQPQEKNFSS 62

Query: 51  FEEVMHGSG----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           F      +G    GVRV +I  DQ+ F   +DP HP AN +G V+ PNV+ L E  D+  
Sbjct: 63  FLNTAMNAGSAGSGVRVSEIREDQTPFKLVYDPSHPDANEAGYVQMPNVDPLREMVDLIS 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R Y AN+     S  MM   L++
Sbjct: 123 ATRSYEANVTVFNASKSMMMKALEI 147


>gi|148380622|ref|YP_001255163.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931376|ref|YP_001384908.1| flagellar basal body rod protein FlgC [Clostridium botulinum A str.
           ATCC 19397]
 gi|153937867|ref|YP_001388377.1| flagellar basal body rod protein FlgC [Clostridium botulinum A str.
           Hall]
 gi|148290106|emb|CAL84225.1| flagellar basal-body rod protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152927420|gb|ABS32920.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
           ATCC 19397]
 gi|152933781|gb|ABS39280.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
           Hall]
          Length = 144

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 67/135 (49%), Gaps = 13/135 (9%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-----GGVRV 63
            I+ SGL+ +  RM  I+ NI+NA TT  T    PY+RK   FEE ++       G    
Sbjct: 9   RISASGLSAERLRMDTIASNISNATTT-RTENGGPYKRKIAVFEENLNNELNKKNGATEK 67

Query: 64  KKIGVDQSTFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           K  GV  +  VE+       +DP HP A+  G V  PNVNVL E ADM  + R Y AN+ 
Sbjct: 68  KLYGVKATGIVEDPSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRTYEANVT 127

Query: 117 TIKQSHDMMTTTLDL 131
            +     M    L++
Sbjct: 128 VMNAEKSMFGKALEI 142


>gi|325473784|gb|EGC76972.1| FlgC protein [Treponema denticola F0402]
          Length = 151

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-------------- 49
           L  S +IA +G+ V+  R  +IS NIANA +  +T    P++R  +              
Sbjct: 3   LFTSINIAATGMGVERLRTDVISNNIANASSL-ETQEGGPFKRSRVIVGQKKSGIDWQTP 61

Query: 50  -SFEEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
            + + +  G G GV+V  I  D S     +DP HP A       G V+YPNVN++ E  D
Sbjct: 62  FTPQNIERGVGEGVKVLSIEKDTSDTRWVYDPTHPKALKYGPKEGYVEYPNVNIVTEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y ANL  +  + DM    LD+ R
Sbjct: 122 LISASRAYEANLAVVNGAKDMFQRALDIAR 151


>gi|138894738|ref|YP_001125191.1| flagellar basal body rod protein FlgC [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247641|ref|ZP_03146343.1| flagellar basal-body rod protein FlgC [Geobacillus sp. G11MC16]
 gi|134266251|gb|ABO66446.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196212425|gb|EDY07182.1| flagellar basal-body rod protein FlgC [Geobacillus sp. G11MC16]
          Length = 150

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 24/149 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTI-------S 50
           +  S +I+ S L  Q  RM +IS NIAN  TT      G+    +PYRRK +        
Sbjct: 3   MFQSLNISASALTAQRLRMDVISSNIANVDTTRARLVNGEW---EPYRRKVVVVEPRGEQ 59

Query: 51  FEEVMHGS--------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           F   +  +         GVRV++I  D + F   +DP HP A   G V+ PNV+ L E  
Sbjct: 60  FSSYLQAALGRTDAVGSGVRVREIVDDPAPFKLLYDPDHPDAGDDGYVRLPNVDPLKEMV 119

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           D+    R Y AN+  +  S  M+   L++
Sbjct: 120 DLIGATRSYEANVTALNASKGMLMKALEI 148


>gi|169831913|ref|YP_001717895.1| flagellar basal-body rod protein FlgC [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638757|gb|ACA60263.1| flagellar basal-body rod protein FlgC [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 139

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSG- 59
           L  S  I+ SG+  +  R+ +IS NIANA TT    G  PYRR+   F    E   G G 
Sbjct: 3   LFKSFGISGSGMTAERLRLDLISNNIANAHTTRTREGG-PYRREVPVFAQYLERFRGRGF 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GVRV  +  D S      +P HP A+A+G V+YPNV++  E  D+   +R Y AN  
Sbjct: 62  AGAGVRVTAVVKDPSPLRAVHEPEHPDADAAGFVQYPNVDLNREFVDLMGASRAYEANAA 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+   L+L R
Sbjct: 122 AFDAAKQMVQRALELGR 138


>gi|196044999|ref|ZP_03112232.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB108]
 gi|225863603|ref|YP_002748981.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB102]
 gi|229183936|ref|ZP_04311152.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BGSC 6E1]
 gi|196024001|gb|EDX62675.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB108]
 gi|225788684|gb|ACO28901.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB102]
 gi|228599588|gb|EEK57192.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BGSC 6E1]
 gi|324325762|gb|ADY21022.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 137

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHG--SGGVRVK 64
           SGL      M++ S NI NA TT   PG++ Y R+++      SF  ++    + GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGANLYERRSVVLESNNSFANMLDSAPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D++  +  +DP HP AN  G V+YPNV+V  E  ++    ++Y AN   +  +  M
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNVDVTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|114562340|ref|YP_749853.1| flagellar basal body rod protein FlgC [Shewanella frigidimarina
           NCIMB 400]
 gi|114333633|gb|ABI71015.1| flagellar basal-body rod protein FlgC [Shewanella frigidimarina
           NCIMB 400]
          Length = 138

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGV 61
           +++ SG++ QS R+   + NIANA +   +     YR +   FE  M       + S GV
Sbjct: 8   NVSGSGMSAQSVRLNTTASNIANADSVSSSVDKT-YRARHPVFEAEMLKANSQQNSSPGV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            VK I       ++E+ P HP+A+  G +  PNVNV+ E ADM   +R Y  N+Q    +
Sbjct: 67  TVKGIVESDKPLLKEYSPDHPMADGDGFIYKPNVNVMEEMADMISASRSYQMNVQVADAT 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KSMLQQTLRM 136


>gi|116694217|ref|YP_728428.1| flagellar basal body rod protein [Ralstonia eutropha H16]
 gi|113528716|emb|CAJ95063.1| flagellar basal body rod protein [Ralstonia eutropha H16]
          Length = 135

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 5/126 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GGVRVKK 65
           +A S +A QS RM + + N+ANA +   +P    YR K + F           GGV+V+ 
Sbjct: 9   VAGSAMAAQSQRMNVTASNLANADSV-VSPDGQAYRAKQVVFGMAPTPGQTDIGGVQVRG 67

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D S      +P HP+ANA G V  PNVN + E  +M   +R Y AN++ +  + +MM
Sbjct: 68  VSEDPSPPRMVHNPTHPMANAQGYVVMPNVNPVEEMVNMISASRSYQANVEVLNTAKNMM 127

Query: 126 TTTLDL 131
             TL +
Sbjct: 128 LKTLTI 133


>gi|242238967|ref|YP_002987148.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech703]
 gi|242131024|gb|ACS85326.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech703]
          Length = 134

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 6/127 (4%)

Query: 9   HIANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE-EVMHGS--GGVRVK 64
            I+ S L  QS RM + + N+ANA + TG  P   PYR K + F+     G   GGVRV 
Sbjct: 8   EISGSALTAQSQRMNVSASNLANADSVTG--PDGQPYRAKQVVFKLAATEGQEIGGVRVD 65

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D S     + PG+P+A+  G V+ PNV+V  E  +    +R Y AN++ +  +  +
Sbjct: 66  DVVEDPSPDKLVYQPGNPLADQRGYVRMPNVDVAAEMVNSISASRSYQANVEVLNTAKTL 125

Query: 125 MTTTLDL 131
           M  TL L
Sbjct: 126 MQKTLTL 132


>gi|149927796|ref|ZP_01916047.1| flagellar basal-body rod protein FlgC [Limnobacter sp. MED105]
 gi|149823418|gb|EDM82649.1| flagellar basal-body rod protein FlgC [Limnobacter sp. MED105]
          Length = 140

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 9/136 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L  S  +A   +  Q+ R+  ++ N+AN  T    P S  Y+ + + FE V+  +     
Sbjct: 3   LFNSFKLAGGAMQAQTTRLNTVASNLANVDTAAGDPNS-VYQARKVVFEAVLQKAAPGKA 61

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                V+VK I  D++   + FDP HP+A+  G V  PNVN + E  DM   +R Y  N 
Sbjct: 62  SLAENVQVKDIVEDKTEAKKMFDPKHPMADEDGYVYMPNVNAVEEMVDMLAASRSYQTNA 121

Query: 116 QTIKQSHDMMTTTLDL 131
           + +  +  +M  TL++
Sbjct: 122 EVMNTAKQLMLKTLNM 137


>gi|299822287|ref|ZP_07054173.1| flagellar basal-body rod protein FlgC [Listeria grayi DSM 20601]
 gi|299815816|gb|EFI83054.1| flagellar basal-body rod protein FlgC [Listeria grayi DSM 20601]
          Length = 136

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 9/130 (6%)

Query: 10  IANSGLAVQSAR--MQIISENIANARTTGDTPGSDPYRRKTISFEEV------MHGSGGV 61
           I  +G A+ +A+  M+I S+NIANA ++   PG  PY RK++  +E+      ++G  GV
Sbjct: 5   INTNGSALNAAKTWMEISSDNIANANSSA-APGEAPYARKSVVLQEISPFEAKLNGVNGV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V+ I  D       +DP HP ++  G V+Y N+++  E  ++    ++Y AN   ++ +
Sbjct: 64  KVENIVSDTKNVKTVYDPTHPNSDQDGYVRYANIDLTAEMTNIMVGQKMYAANTSALQAN 123

Query: 122 HDMMTTTLDL 131
             M+   L++
Sbjct: 124 EKMLDKELEI 133


>gi|327441057|dbj|BAK17422.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
          Length = 154

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 21/140 (15%)

Query: 13  SGLAVQSARMQIISENIANARTT--GDTPGS-DPYRRKTISFEEV--------------- 54
           S L  Q  RM +IS NIAN  TT      G  +PYR+K+++ +E                
Sbjct: 12  SALTTQRLRMDVISSNIANVDTTRAKQVNGEWEPYRKKSVTLKEQEGQFSNFLNMAIGKT 71

Query: 55  -MHGSG-GVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
             +G G GV+V  I  D  T F   +DP HP ANA G V+  NV+VL E  D+   +R Y
Sbjct: 72  EKNGIGNGVKVSSIKEDTETPFKLMYDPSHPDANAEGYVQMSNVDVLKEMVDLISASRSY 131

Query: 112 MANLQTIKQSHDMMTTTLDL 131
            AN+     + +M+T  L++
Sbjct: 132 EANITAFNANKNMLTKALEI 151


>gi|251797447|ref|YP_003012178.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. JDR-2]
 gi|247545073|gb|ACT02092.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. JDR-2]
          Length = 151

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 69/136 (50%), Gaps = 19/136 (13%)

Query: 15  LAVQSARMQIISENIANARTT--GDTPGSD-PYRRKTI---------SFEEVMH------ 56
           L  Q  RM +IS NIANA TT  G   G   PY+RK +         SF ++++      
Sbjct: 14  LTAQRLRMDVISSNIANAETTRAGYVNGQFVPYKRKMVVLEPMTQNSSFSDLLNKQLEGT 73

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
            G+ GV+  +I  DQS     ++P HP A+A G V  PNV+V  E  DM   +R Y AN+
Sbjct: 74  SGAQGVKATRIIEDQSPTKLVYNPTHPDADADGYVHMPNVDVAKEMVDMISASRSYEANV 133

Query: 116 QTIKQSHDMMTTTLDL 131
             +  S  M T  L++
Sbjct: 134 TALNASKAMFTKALEI 149


>gi|171059414|ref|YP_001791763.1| flagellar basal-body rod protein FlgC [Leptothrix cholodnii SP-6]
 gi|170776859|gb|ACB34998.1| flagellar basal-body rod protein FlgC [Leptothrix cholodnii SP-6]
          Length = 136

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKK 65
           ++A S ++ QS R+  ++ N+ANA T    P    ++ + + F+ V  G   + GV+V +
Sbjct: 8   NVAGSAVSAQSQRLNAVATNLANADTVAG-PDGQSFKARQVMFQSVQMGEMGAAGVKVSQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  DQS      DP HP A+A G V Y NVN + E  +M   +R Y  N++ +  +  ++
Sbjct: 67  ITEDQSPGRRVHDPKHPQADAEGYVTYSNVNAVEEMVNMISASRSYQNNVEVMNTAKTLL 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 LKTLQM 132


>gi|157961169|ref|YP_001501203.1| flagellar basal body rod protein FlgC [Shewanella pealeana ATCC
           700345]
 gi|157846169|gb|ABV86668.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
           700345]
          Length = 138

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-----HGSGGVRV 63
           ++A SG++ QS R+   + NIANA +   + G + YR +   FE  M     H S    V
Sbjct: 8   NVAGSGMSAQSVRLNTTASNIANADSVSSSVG-ETYRARHPIFEAEMSKAQQHQSAAQSV 66

Query: 64  KKIGVDQSTFV--EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
              G+ +S     +EF P HP+A+  G +  PNVNV+ E A+M   +R Y  N+Q  + +
Sbjct: 67  AVKGIVESDLPLNKEFSPDHPMADTDGFIYKPNVNVMEEMANMISASRSYQMNVQVTEAA 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KSMLQQTLRI 136


>gi|167465320|ref|ZP_02330409.1| flagellar basal body rod protein FlgC [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 149

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 72/141 (51%), Gaps = 17/141 (12%)

Query: 10  IANSGLAVQSARMQIISENIANARTT-GDTPGSD--PYRRKTISFE-------------E 53
           I++S L  Q  RM +IS NIANA +T G        PY+RK +  E              
Sbjct: 9   ISSSALTAQRLRMDVISSNIANADSTRGKFVDGKWVPYQRKMVVVEPKNQTNFAQNLQNA 68

Query: 54  VMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
           + +G+G GVRV  I  DQ+ F   ++P HP ++A G V  PNV++  E  DM    R Y 
Sbjct: 69  MKNGTGQGVRVSNIVGDQTPFKRVYNPVHPDSDADGYVYMPNVDIQKEMVDMISATRSYE 128

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN+  +  +  M+T  L++ R
Sbjct: 129 ANVTALNATKGMITKALEIGR 149


>gi|294500941|ref|YP_003564641.1| flagellar basal-body rod protein FlgC [Bacillus megaterium QM
           B1551]
 gi|294350878|gb|ADE71207.1| flagellar basal-body rod protein FlgC [Bacillus megaterium QM
           B1551]
          Length = 149

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 17/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS---DPYRRKTI--------SFE 52
           +  + +I +S L     RM ++S N+ANA TT  T  +    PY+RK +        SF 
Sbjct: 3   IFRNMNITSSALTANRLRMDVVSSNMANAETTRGTYVNGEWQPYKRKMVVIQSDRSPSFS 62

Query: 53  EVMHG------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            ++H       + GV+V  I  D + F   ++P HP AN  G VK PNV+ L E  D+  
Sbjct: 63  SLLHSEINKNQNNGVKVTDIVEDNTPFNLVYNPTHPDANDQGYVKMPNVDPLKEMTDLIS 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R Y AN+     +  ++T  L++
Sbjct: 123 ATRSYEANVTVFNTNKSILTKALEI 147


>gi|299534789|ref|ZP_07048119.1| flagellar basal body rod protein FlgC [Lysinibacillus fusiformis
           ZC1]
 gi|298729877|gb|EFI70422.1| flagellar basal body rod protein FlgC [Lysinibacillus fusiformis
           ZC1]
          Length = 153

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 27/143 (18%)

Query: 13  SGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTIS----------FEEVMH 56
           S L  Q  RM +IS N+AN  TT      G+    +PYRRK+++          F  V  
Sbjct: 12  SALTAQRLRMDVISSNMANMDTTRARQVNGEW---EPYRRKSVTLSAQEGQFSNFLNVAL 68

Query: 57  GSG-------GVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
           G         GV++ +I  DQ T F   +DP HP ANA G V  PNV+ L E  D+    
Sbjct: 69  GKNAKSGVGNGVKITRISEDQETPFKLVYDPTHPDANADGYVNMPNVDPLKEMVDLMSAT 128

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN+     +  M+T  L++
Sbjct: 129 RSYEANITVFNANKSMLTKALEI 151


>gi|92114100|ref|YP_574028.1| flagellar basal-body rod protein FlgC [Chromohalobacter salexigens
           DSM 3043]
 gi|91797190|gb|ABE59329.1| flagellar basal-body rod protein FlgC [Chromohalobacter salexigens
           DSM 3043]
          Length = 135

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 4/114 (3%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKKIGVDQSTFVEEF 77
           RM   + N+ANA +    P  +PYR K + F+    G    GGVR  ++  D +    E+
Sbjct: 20  RMNATASNMANADSVA-GPDGEPYRAKHVMFQAQSQGGSELGGVRATEVVEDDAPPRMEY 78

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            PGHP+A+  G V  PNV+ + E  DM   +R Y AN++ +  S  +M  TL +
Sbjct: 79  RPGHPLADEDGYVAMPNVDPVDEMVDMIAASRSYQANVEVMNTSKSLMQQTLSI 132


>gi|284007175|emb|CBA72461.1| flagellar basal body rod protein FlgC [Arsenophonus nasoniae]
          Length = 135

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 6/115 (5%)

Query: 21  RMQIISENIANART-TGDTPGSDPYRRKTISF---EEVMHGSGGVRVKKIGVDQSTFVEE 76
           R+ + + N+ANA + TG  P  +PYR K + F   E   +G GGV V ++  D S F  E
Sbjct: 21  RLNVSASNMANADSVTG--PNGEPYRAKQVVFSVSELSANGIGGVSVAQVVDDPSPFRLE 78

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           + P HP+A+  G ++ PNV+V  E  +    +R Y AN++ +  +  +M  TL L
Sbjct: 79  YQPAHPLADQRGYIRKPNVDVTAEMINPISASRSYQANIEVMNTTKSLMQKTLTL 133


>gi|308173581|ref|YP_003920286.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens DSM 7]
 gi|307606445|emb|CBI42816.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens DSM 7]
 gi|328553487|gb|AEB23979.1| flagellar basal body rod protein FlgC [Bacillus amyloliquefaciens
           TA208]
 gi|328911722|gb|AEB63318.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens LL3]
          Length = 150

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 71/146 (48%), Gaps = 24/146 (16%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTISFEE------- 53
           S +I+ S L  Q  RM ++S N+AN  TT      G+     PYRRK +S +        
Sbjct: 6   SLNISGSALTAQRVRMDVVSSNLANMDTTRAKQVNGEWV---PYRRKLVSLQSGGESFSS 62

Query: 54  ----VMHGSG----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                M+G G    GV+V  +  D S F   +DP +P AN  G V+ PNV+ L E  D+ 
Sbjct: 63  LLNSKMNGIGSAGNGVKVSAVTEDPSAFNLVYDPENPDANKDGYVQKPNVDPLKEMVDLV 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDL 131
            + R Y AN+  +  S  M+   L++
Sbjct: 123 SSTRSYEANVTALNASKGMLLKALEI 148


>gi|205373369|ref|ZP_03226173.1| flagellar basal body rod protein FlgC [Bacillus coahuilensis m4-4]
          Length = 149

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 17/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT-GDTPGSD--PYRRKTI-------SFEE 53
           +  S +I+ S L  Q  RM +IS N+ANA TT G+    +  PY RK++       +F  
Sbjct: 3   IFQSINISTSALTAQRLRMDVISSNVANADTTRGEYVNGEWQPYTRKSVVLQENQGNFSS 62

Query: 54  VMH-----GS-GGVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           +++     GS  GV VK+I  D  T F   FDP HP A+A G VK PNV+ L E  D+  
Sbjct: 63  LLNQAKNTGSVNGVVVKEIKEDTETPFNLVFDPTHPDADAEGYVKMPNVDPLREMTDLIS 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R Y AN+  +  +  ++  +L++
Sbjct: 123 ATRSYEANVTVMNANKALLMKSLEI 147


>gi|311694359|gb|ADP97232.1| flagellar basal-body rod protein FlgC-like protein [marine
           bacterium HP15]
          Length = 149

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 18/139 (12%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-----GSGG---- 60
           IA SG+  QS R+   + NIANA T   + G + YR +   F  +       G GG    
Sbjct: 9   IAGSGMTAQSLRLNTTASNIANAETASSSTG-ETYRARKPVFSAIQQSLMNPGQGGLPMA 67

Query: 61  --------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                   VRV  I    +     ++P HP AN  G V YPNVNV+ E ADM  ++R + 
Sbjct: 68  ADEGPGAGVRVDGIVESDAELQMRYEPHHPAANEDGYVFYPNVNVVEEMADMMSSSRSFQ 127

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N+  +  +  MM   L L
Sbjct: 128 MNVDVMNTAKSMMQRILTL 146


>gi|294140182|ref|YP_003556160.1| flagellar basal-body rod protein FlgC [Shewanella violacea DSS12]
 gi|293326651|dbj|BAJ01382.1| flagellar basal-body rod protein FlgC [Shewanella violacea DSS12]
          Length = 138

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGV 61
           ++A SG++ QS R+   + NIANA +   +     YR +   FE  M         S  V
Sbjct: 8   NVAGSGMSAQSIRLNTTASNIANADSVSSSVDKT-YRARHPIFEAEMAKASYQQQSSPSV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +VK I    +  ++E+ P HP+A+  G +  PNVNV+ E A+M   +R Y  N+Q  + +
Sbjct: 67  KVKGIVESDAPLLKEYSPNHPMADGDGFIYKPNVNVMEEMANMISASRSYQMNVQVAEAA 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KSMLQQTLRI 136


>gi|229918625|ref|YP_002887271.1| flagellar basal-body rod protein FlgC [Exiguobacterium sp. AT1b]
 gi|229470054|gb|ACQ71826.1| flagellar basal-body rod protein FlgC [Exiguobacterium sp. AT1b]
          Length = 142

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 9/137 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT-GDTPGSD--PYRRKTISFEEVMHG--- 57
           +  S HI+ S L  Q  RM  +S NIANA+TT G     +  PY RK    +E       
Sbjct: 3   MFDSFHISASALTSQRLRMDTVSANIANAQTTRGKLVDGEWQPYTRKMTVLQEAPFRKRL 62

Query: 58  ---SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              +GGV+V +I  D + +   ++P HP A+  G V+ PNV++L E  D+    R Y AN
Sbjct: 63  DAVNGGVQVSQIIEDDAPYKLVYNPNHPDADERGYVQMPNVDLLKEMVDLMGATRSYEAN 122

Query: 115 LQTIKQSHDMMTTTLDL 131
           +  +  S  M+   +++
Sbjct: 123 IAAMNASKAMLVKAMEI 139


>gi|315927025|gb|EFV06380.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 144

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 33/144 (22%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISF----------EEVMHGSGGVRVKKIGVDQS 71
           M +IS NIANA TT    G  PYRR+ + F          E++   +  ++ +    D S
Sbjct: 1   MNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLLNEQINKDNNFLKYENPLNDPS 59

Query: 72  T----------------------FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
           +                      F  ++DP HP ANA G V YPNVN ++E AD+ E  R
Sbjct: 60  SPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATR 119

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+     +  +  + +DLLR
Sbjct: 120 AYQANVSAFTSAKTISQSAIDLLR 143


>gi|295706287|ref|YP_003599362.1| flagellar basal-body rod protein FlgC [Bacillus megaterium DSM 319]
 gi|294803946|gb|ADF41012.1| flagellar basal-body rod protein FlgC [Bacillus megaterium DSM 319]
          Length = 149

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 17/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS---DPYRRKTI--------SFE 52
           +  + +I +S L     RM ++S N+ANA TT  T  +    PY+RK +        SF 
Sbjct: 3   IFQNMNITSSALTANRLRMDVVSSNMANAETTRGTYVNGEWQPYKRKMVVMQSDRSPSFS 62

Query: 53  EVMHG------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            V+H       + GV+V  I  D + F   ++P HP AN  G V+ PNV+ L E  D+  
Sbjct: 63  SVLHSEINKNQNNGVKVTDIVEDNTPFNLVYNPTHPDANDQGYVQMPNVDPLKEMTDLIS 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
             R Y AN+     +  ++T  L++
Sbjct: 123 ATRSYEANVTVFNTNKSILTKALEI 147


>gi|228964727|ref|ZP_04125834.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228794977|gb|EEM42476.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 128

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 10/114 (8%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHG--SGGVRVK 64
           SGL      M++ S NI NA TT   PG+D Y R+++      SF  ++ G  + GV++K
Sbjct: 10  SGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDGAPTNGVKIK 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            I  D++  +  +DP HP AN  G V+YPN++V  E  ++    ++Y AN   +
Sbjct: 69  SIEADKTENLV-YDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTSVL 121


>gi|24374760|ref|NP_718803.1| flagellar basal body rod protein FlgC [Shewanella oneidensis MR-1]
 gi|24349426|gb|AAN56247.1|AE015762_4 flagellar basal-body rod protein FlgC [Shewanella oneidensis MR-1]
          Length = 138

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVR 62
           +A SG++ QS R+   + NIANA +   +     YR +   FE  M         S GV 
Sbjct: 9   VAGSGMSAQSLRLNTTASNIANADSVSSSI-DKTYRSRHPIFEAEMAKAQSQQQASQGVA 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           VK I       ++E+ P HP+A+  G +  PNVNV+ E ADM   +R Y  N+Q  + + 
Sbjct: 68  VKGIVESDKPLLKEYSPDHPMADGDGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAK 127

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 128 SMLQQTLGM 136


>gi|291617018|ref|YP_003519760.1| FlgC [Pantoea ananatis LMG 20103]
 gi|291152048|gb|ADD76632.1| FlgC [Pantoea ananatis LMG 20103]
 gi|327393469|dbj|BAK10891.1| flagellar basal-body rod protein FlgC [Pantoea ananatis AJ13355]
          Length = 134

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S +  QS R+ + + N+ANA + TG  P   PY  K + F+        +GGV+V +
Sbjct: 9   IAGSAMTAQSQRLNVSASNLANADSVTG--PDGQPYVAKQVVFQTDAAAGAATGGVKVAQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D +     +DPG+P+A+A G VK PNV+V+ ET +    +R Y AN++ +     MM
Sbjct: 67  VVDDPTPAKLVYDPGNPMADAKGYVKMPNVDVVAETVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 MKTLTM 132


>gi|119775452|ref|YP_928192.1| flagellar basal body rod protein FlgC [Shewanella amazonensis SB2B]
 gi|119767952|gb|ABM00523.1| flagellar basal-body rod protein FlgC [Shewanella amazonensis SB2B]
          Length = 137

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 7/129 (5%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------HGSGGVR 62
           +++ SG++ QS R+   + NIANA +   +     YR +   FE  +        + GV 
Sbjct: 8   NVSGSGMSAQSVRLNTTASNIANADSVSSSV-DKTYRARHPVFEAELAKASQQQSARGVN 66

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           VK I        +E++P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q    + 
Sbjct: 67  VKGIVESDKPLQKEYNPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQVADTAK 126

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 127 SMLMQTLRM 135


>gi|30248320|ref|NP_840390.1| flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
 gi|30138206|emb|CAD84214.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 134

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 11/133 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV---MHGSGG 60
           L +  ++A S +A QS R+ +++ N+ANA +   + G + YR + + F  +      + G
Sbjct: 3   LFSVFNVAGSSMAAQSQRLNVVASNLANADSATSSTG-EAYRSRQVVFRTIDVTADKAKG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +  D S     +DP HP+AN  G V  PNVNV+ E  +M   +R Y       + 
Sbjct: 62  VKVAGVVNDPSPMRVVYDPKHPMANEKGYVTLPNVNVVDEMVNMMSASRSY-------QN 114

Query: 121 SHDMMTTTLDLLR 133
           S DMM  T  LL+
Sbjct: 115 SVDMMNVTKTLLQ 127


>gi|313634361|gb|EFS00958.1| flagellar basal-body rod protein FlgC [Listeria seeligeri FSL
           N1-067]
          Length = 138

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 11/132 (8%)

Query: 10  IANSGLAVQSAR--MQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGSGGV 61
           I  SG A+ +A+  M++ S NIANA ++   PG  P+ RK +       FE  + G+ GV
Sbjct: 5   INTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVMSEISPFETALTGTKGV 63

Query: 62  RVKKIGVDQSTFVEE--FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           +V +I  D  +   +  +DP HP AN +G V Y NV++  E  ++    ++Y AN   ++
Sbjct: 64  KVSEISSDTGSVNVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQ 123

Query: 120 QSHDMMTTTLDL 131
            +  MM   L++
Sbjct: 124 ANEKMMEKDLEI 135


>gi|149911704|ref|ZP_01900312.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Moritella sp. PE36]
 gi|149805234|gb|EDM65251.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Moritella sp. PE36]
          Length = 140

 Score = 70.5 bits (171), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           IA S ++ QS R+   + N+ANA +   + G + Y+ +   F+  +  +   + + +GV+
Sbjct: 9   IAGSAMSAQSVRLNTTASNLANANSVSSSAG-ETYKARYPIFQAQLDQANFSQNEAVGVN 67

Query: 70  QSTFVE-------EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +  VE       EF+P HP+A+ +G V  PNVN++ E A+M   +R Y  N+Q    + 
Sbjct: 68  VAGIVESDAPLVNEFNPNHPLADENGYVYRPNVNIMEEMANMISASRSYQTNVQIADAAK 127

Query: 123 DMMTTTLDL 131
            M+  TL L
Sbjct: 128 KMLNKTLAL 136


>gi|291558197|emb|CBL35314.1| flagellar basal-body rod protein FlgC [Eubacterium siraeum V10Sc8a]
          Length = 160

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 29/156 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
            ++S +IA SG+A +  R+ +IS+N+ANA+TT    G+ PYRR+ + F            
Sbjct: 3   FLSSLNIAASGMAAERLRLDVISQNVANAKTTRTEDGT-PYRRQVVLFSENKGFNSVLEE 61

Query: 52  ------EEVMHG----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNV 95
                 E++  G          + GV V +I  D++     +DP HP A+ +G    PNV
Sbjct: 62  TIAKRKEKIAGGVPANTVSATKNKGVLVTEIVEDETPLTPVYDPTHPDADENGYYYLPNV 121

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +V  E  D     R Y ANL  +     M  T L +
Sbjct: 122 DVAEEQMDAMAATRSYEANLAVLNAVKSMAQTALSI 157


>gi|73539448|ref|YP_299815.1| flagellar basal-body rod protein FlgC [Ralstonia eutropha JMP134]
 gi|72122785|gb|AAZ64971.1| Flagellar basal-body rod protein FlgC [Ralstonia eutropha JMP134]
          Length = 135

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 5/126 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV----MHGSGGVRVKK 65
           +A S +A QS RM + + N+ANA +   +P    YR K + F           GGV+V+ 
Sbjct: 9   VAGSAMAAQSQRMNVTASNLANADSV-VSPDGQAYRTKQVIFGMAPTPGQSDVGGVQVQG 67

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D S      +P HP+ANA G V  PNVN + E  +M   +R Y AN++ +  + +MM
Sbjct: 68  VMEDPSPPRMVHNPTHPMANAEGYVVMPNVNPVEEMVNMISASRSYQANVEVLNSAKNMM 127

Query: 126 TTTLDL 131
             TL +
Sbjct: 128 LKTLTI 133


>gi|167750732|ref|ZP_02422859.1| hypothetical protein EUBSIR_01710 [Eubacterium siraeum DSM 15702]
 gi|167656411|gb|EDS00541.1| hypothetical protein EUBSIR_01710 [Eubacterium siraeum DSM 15702]
 gi|291532066|emb|CBK97651.1| flagellar basal-body rod protein FlgC [Eubacterium siraeum 70/3]
          Length = 160

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 29/156 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
            ++S +IA SG+A +  R+ +IS+N+ANA+TT    G+ PYRR+ + F            
Sbjct: 3   FLSSLNIAASGMAAERLRLDVISQNVANAKTTRTEDGT-PYRRQVVLFSENKGFNSVLEE 61

Query: 52  ------EEVMHG----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNV 95
                 E++  G          + GV V +I  D++     +DP HP A+ +G    PNV
Sbjct: 62  TIAKRKEKIAGGVPANTVSATKNKGVLVTEIVEDETPLTPVYDPTHPDADENGYYYLPNV 121

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +V  E  D     R Y ANL  +     M  T L +
Sbjct: 122 DVAEEEMDAMAATRSYEANLAVLNAVKSMAQTALSI 157


>gi|78485814|ref|YP_391739.1| flagellar basal-body rod protein FlgC [Thiomicrospira crunogena
           XCL-2]
 gi|78364100|gb|ABB42065.1| Flagellar basal-body rod protein FlgC [Thiomicrospira crunogena
           XCL-2]
          Length = 136

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 6/133 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-----S 58
           +  +  I+ +G+  Q+ R+  I+ N+AN  +       + YR K   F+ +M       +
Sbjct: 3   MFPTLDISATGMHAQTVRLNTIASNMANVDSISSN-SDETYRSKQPVFKTIMDNETGRPA 61

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGV V  I   ++    E++P HP+ANA G +  PNVNV+ E A+M   +R Y  N++ +
Sbjct: 62  GGVMVDDIVESKAPLKMEYNPNHPMANAEGYIYRPNVNVVEEMANMMSASRSYETNIEVL 121

Query: 119 KQSHDMMTTTLDL 131
             S  ++  T+ +
Sbjct: 122 NTSKQLLLRTIQM 134


>gi|289548424|ref|YP_003473412.1| flagellar basal-body rod protein FlgC [Thermocrinis albus DSM
           14484]
 gi|289182041|gb|ADC89285.1| flagellar basal-body rod protein FlgC [Thermocrinis albus DSM
           14484]
          Length = 137

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 8/131 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------MHGSGGVR 62
            ++ SG+  Q  R+ +I+ N+AN  +   T   +PYRR    FE V        G   VR
Sbjct: 9   EVSASGMYAQRVRINVIASNLANYESY--TREGEPYRRLEPVFEAVETPGNLSKGLVPVR 66

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V +I    + F   FDP +P A+  G V+ PNV+V  E  DM    R Y ANL     + 
Sbjct: 67  VVEIRRSDAPFRLLFDPTNPRADRDGFVRLPNVDVTAEMVDMLSALRSYEANLTAFNATK 126

Query: 123 DMMTTTLDLLR 133
           +++  TL+L R
Sbjct: 127 EIVQRTLELWR 137


>gi|94500239|ref|ZP_01306772.1| flagellar basal-body rod protein FlgC [Oceanobacter sp. RED65]
 gi|94427538|gb|EAT12515.1| flagellar basal-body rod protein FlgC [Oceanobacter sp. RED65]
          Length = 148

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 18/140 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---------------- 52
           ++A +G+  QS R+   + NIANA T   +   + YR +   F+                
Sbjct: 8   NVAGTGMNAQSVRLNTTASNIANAETVSSSI-DETYRARKPWFQALQKEWDDIEGLSDKL 66

Query: 53  EVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           E+  G G GV V  I    +     F+P HP+A+  G V YPNVN++ E  DM  ++R Y
Sbjct: 67  ELRKGVGDGVHVAAIVESDAPLKRRFEPHHPMADEEGYVMYPNVNIVEEMTDMMSSSRSY 126

Query: 112 MANLQTIKQSHDMMTTTLDL 131
             N++ +K +  M+  TL L
Sbjct: 127 QMNVEMMKTAKQMLQRTLTL 146


>gi|197285512|ref|YP_002151384.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227356003|ref|ZP_03840395.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
 gi|194682999|emb|CAR43448.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227163991|gb|EEI48893.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
          Length = 134

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 4/129 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L +   I+ S L+ QS R+ + + N+AN  +    P  +PYR K + F+         GG
Sbjct: 3   LFSIFDISGSALSAQSQRLNVSASNMANVDSVVG-PDGEPYRAKQVVFQVNAPAGQDIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V ++  D + F  E+ PG+P A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VHVTQVVDDPTPFRMEYQPGNPFADEKGYVRKPNVDVVGEMINTISASRSYQANVEVMNT 121

Query: 121 SHDMMTTTL 129
           +  +M  TL
Sbjct: 122 AKSLMQKTL 130


>gi|255598721|ref|XP_002537067.1| Flagellar basal-body rod protein flgC, putative [Ricinus communis]
 gi|223517602|gb|EEF25316.1| Flagellar basal-body rod protein flgC, putative [Ricinus communis]
          Length = 121

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 4/120 (3%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGVRVKKIGVDQS 71
           ++ QS R+  ++ N+ANA +   + G  PY+ K + F+ V    + S  V V+++  D  
Sbjct: 1   MSAQSMRLNTVASNLANADSVVSSDGK-PYQSKQVVFKAVQDAANKSSTVEVERVIEDTK 59

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                +DP HP+ANA G +  PNVNV  E  +M   +R Y  N++T+  +  M+  TL++
Sbjct: 60  PGKMVYDPKHPMANADGYITMPNVNVTEEMVNMISASRAYQNNVETMNAAKTMLLKTLNI 119


>gi|323527715|ref|YP_004229868.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1001]
 gi|323384717|gb|ADX56808.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1001]
          Length = 141

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 16/134 (11%)

Query: 10  IANSGLAVQSARMQIISENIANA-RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           +A S ++ QS R+ + + N+ANA  TTG  P   PYR K + F   +   GG R      
Sbjct: 10  VAGSAMSAQSQRLNVTASNLANADSTTG--PDGQPYRAKQVVF--AVAPLGGARTASGQQ 65

Query: 69  -----------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                      D +     +DPG+P ANA G V  PNV+ + E  +M   +R Y AN++T
Sbjct: 66  VGGVQVTGVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVET 125

Query: 118 IKQSHDMMTTTLDL 131
           +  +  +M  TL +
Sbjct: 126 LNTAKTLMLKTLTI 139


>gi|121607563|ref|YP_995370.1| flagellar basal-body rod protein FlgC [Verminephrobacter eiseniae
           EF01-2]
 gi|121552203|gb|ABM56352.1| flagellar basal-body rod protein FlgC [Verminephrobacter eiseniae
           EF01-2]
          Length = 134

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKK 65
           +++ S ++ Q+ R+ +++ N+AN       P   PY+ + + F+    G+    GVRV  
Sbjct: 8   NLSGSAISAQAQRLNVVASNLANVDAVAG-PDGQPYKARQVVFQTAPMGAPSAAGVRVIA 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I   Q       DPGHP+A+A G V + NVN + E  DM    R Y  N++ +  +  ++
Sbjct: 67  ISESQVPGRRVHDPGHPLADAQGYVTHSNVNAVQEMVDMISAARSYQNNVEVMNTAKSLL 126

Query: 126 TTTLDL 131
             TL L
Sbjct: 127 LKTLQL 132


>gi|120554031|ref|YP_958382.1| flagellar basal body rod protein FlgC [Marinobacter aquaeolei VT8]
 gi|120323880|gb|ABM18195.1| flagellar basal-body rod protein FlgC [Marinobacter aquaeolei VT8]
          Length = 149

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 16/138 (11%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--SFEEVM------------ 55
           IA SG+  QS R+   + NIANA T   +  +    RK +  + ++ M            
Sbjct: 9   IAGSGMTAQSLRLNTTASNIANAETASSSTDTTYRARKPVFAAIQQAMLNPDQQGFGMGS 68

Query: 56  -HGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             G G GVRV+ I    +     ++P HP AN  G V YPNVNV+ E ADM  ++R +  
Sbjct: 69  EEGPGAGVRVEGIVESDAELQMRYEPNHPAANEEGYVYYPNVNVVEEMADMMSSSRSFQM 128

Query: 114 NLQTIKQSHDMMTTTLDL 131
           N+  +  +  MM   L L
Sbjct: 129 NVDVMNTAKSMMQRILTL 146


>gi|114330359|ref|YP_746581.1| flagellar basal-body rod protein FlgC [Nitrosomonas eutropha C91]
 gi|114307373|gb|ABI58616.1| flagellar basal-body rod protein FlgC [Nitrosomonas eutropha C91]
          Length = 134

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 11/133 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV---MHGSGG 60
           L +  ++A S +A QS R+ +++ N+ANA +   + G + YR + + F  V      + G
Sbjct: 3   LFSVFNVAGSAMAAQSQRLNVVASNLANADSATSSTG-EAYRSRQVVFRTVDISADKAKG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  I  D S     +DP HP+A+  G V  PNVNV+ E  +M   +R Y       + 
Sbjct: 62  VKVAGIVHDPSPMRVVYDPKHPMADEKGYVTLPNVNVVDEMVNMMSASRSY-------QN 114

Query: 121 SHDMMTTTLDLLR 133
           S DMM  T  LL+
Sbjct: 115 SVDMMNVTKTLLQ 127


>gi|288553067|ref|YP_003425002.1| flagellar basal body rod protein FlgC [Bacillus pseudofirmus OF4]
 gi|288544227|gb|ADC48110.1| flagellar basal body rod protein FlgC [Bacillus pseudofirmus OF4]
          Length = 151

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 25/152 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTISFE----- 52
           L +  + + S L  Q  RM +IS N+ANA TT      G+     PYRRK +  E     
Sbjct: 3   LFSGFNASASALTTQRLRMDVISSNMANAETTRARMVDGEW---TPYRRKMVVVEPNQKQ 59

Query: 53  -----------EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                      +      GV+   I  DQ+ F   +DP HP AN  G V+ PNV+ L E 
Sbjct: 60  PFSAFLGNAMKQNSEAGTGVKASAIVEDQNPFKLLYDPTHPDANEDGYVEMPNVDPLREM 119

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D+    R Y AN+ ++  + +M+   L++ R
Sbjct: 120 VDLMTATRSYEANVTSLNATKNMLMKALEIGR 151


>gi|221636059|ref|YP_002523935.1| flagellar basal-body rod protein FlgC [Thermomicrobium roseum DSM
           5159]
 gi|221158060|gb|ACM07178.1| flagellar basal-body rod protein FlgC [Thermomicrobium roseum DSM
           5159]
          Length = 151

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 20/149 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           ++ +  ++ S L  Q  RM + + N+AN  TT  TP   PY R+ + F            
Sbjct: 3   ILETMRVSLSALTAQRVRMDVTASNLANVDTT-RTPQGGPYLRRQVVFATEQPSPFARLV 61

Query: 52  -------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                  E       GV+V  I VD+    E +DP HP A+A+GIV+YP+++V+ E  ++
Sbjct: 62  QTRTGLVETTPSAGRGVQVAGIVVDRRAVREVYDPTHPDADANGIVRYPDIDVVSEMTNL 121

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  +     M    L + R
Sbjct: 122 MAATRAYEANVTVLDALKTMAMRALSIGR 150


>gi|156973584|ref|YP_001444491.1| flagellar basal body rod protein FlgC [Vibrio harveyi ATCC
           BAA-1116]
 gi|156525178|gb|ABU70264.1| hypothetical protein VIBHAR_01287 [Vibrio harveyi ATCC BAA-1116]
          Length = 137

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 7/129 (5%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSGGVRVK 64
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F       M G   V VK
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMRGGDTVPVK 66

Query: 65  KIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  NLQ    S 
Sbjct: 67  VMGIVESDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNLQVADSSK 126

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 127 QMLLRTLQM 135


>gi|313620054|gb|EFR91569.1| flagellar basal-body rod protein FlgC [Listeria innocua FSL S4-378]
          Length = 121

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 10  IANSGLAVQSAR--MQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGSGGV 61
           I  SG A+ +A+  M++ S NIANA ++   PG  P+ RK +       FE  + G+ GV
Sbjct: 5   INTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTGTKGV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           +V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   ++
Sbjct: 64  KVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQ 121


>gi|332525068|ref|ZP_08401248.1| flagellar basal-body rod protein FlgC [Rubrivivax benzoatilyticus
           JA2]
 gi|332108357|gb|EGJ09581.1| flagellar basal-body rod protein FlgC [Rubrivivax benzoatilyticus
           JA2]
          Length = 139

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GVR 62
           ++ S ++ QS R+ +++ N+ANA T    P    Y+ + + F+  +  +G       GVR
Sbjct: 9   VSGSAVSAQSQRLNVVASNLANADTVAG-PDGQAYKARQVVFQTALMDAGADPASAAGVR 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V  I  D S      DP HP A+A G V + NVN + E  DM   +R Y  N++ +  + 
Sbjct: 68  VSTIREDASPGRRVHDPKHPAADAEGYVTFSNVNAVQEMVDMISASRSYQNNVEVMNTAK 127

Query: 123 DMMTTTLDL 131
            ++  TL +
Sbjct: 128 TLLQKTLQM 136


>gi|1857438|gb|AAC45656.1| FlgC [Proteus mirabilis]
          Length = 134

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 4/129 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L +   I+ S L+ QS R+ + + N+AN  +    P  +PYR K + F+         GG
Sbjct: 3   LFSIFDISGSALSAQSQRLNVSASNMANVDSVVG-PDGEPYRAKQVVFQVNAPAGQEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V ++  D + F  E+ PG+P A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VHVTQVVDDPTPFRMEYQPGNPFADEKGYVRKPNVDVVGEMINTISASRSYQANVEVMNT 121

Query: 121 SHDMMTTTL 129
           +  +M  TL
Sbjct: 122 AKSLMQKTL 130


>gi|28869138|ref|NP_791757.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|66046709|ref|YP_236550.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           syringae B728a]
 gi|71737330|ref|YP_275565.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213967584|ref|ZP_03395732.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato T1]
 gi|237799204|ref|ZP_04587665.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806223|ref|ZP_04592927.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|257484951|ref|ZP_05638992.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289627761|ref|ZP_06460715.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651649|ref|ZP_06482992.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298487859|ref|ZP_07005899.1| Flagellar basal-body rod protein flgC [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|301385711|ref|ZP_07234129.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060077|ref|ZP_07251618.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato K40]
 gi|302134836|ref|ZP_07260826.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|302185585|ref|ZP_07262258.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           syringae 642]
 gi|28852378|gb|AAO55452.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|63257416|gb|AAY38512.1| Flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           syringae B728a]
 gi|71557883|gb|AAZ37094.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213927885|gb|EEB61432.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato T1]
 gi|298157584|gb|EFH98664.1| Flagellar basal-body rod protein flgC [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320325091|gb|EFW81160.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329350|gb|EFW85343.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330866420|gb|EGH01129.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330875981|gb|EGH10130.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330880520|gb|EGH14669.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330889087|gb|EGH21748.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           mori str. 301020]
 gi|330899399|gb|EGH30818.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330943205|gb|EGH45612.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           pisi str. 1704B]
 gi|330953719|gb|EGH53979.1| flagellar basal body rod protein FlgC [Pseudomonas syringae Cit 7]
 gi|330961194|gb|EGH61454.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|330967088|gb|EGH67348.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|330972411|gb|EGH72477.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aceris str. M302273PT]
 gi|330975974|gb|EGH76040.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aptata str. DSM 50252]
 gi|330986466|gb|EGH84569.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011040|gb|EGH91096.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331017028|gb|EGH97084.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
 gi|331022059|gb|EGI02116.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027336|gb|EGI07391.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 146

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 16/138 (11%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--------- 59
           +IA S ++ Q+ R+   + NIANA T   +     YR +   F  VM G           
Sbjct: 8   NIAGSAMSAQTTRLNTTASNIANAETVSSSM-DQTYRARHPVFATVMQGQQSTGGSLFQD 66

Query: 60  ------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                 GV+V  I  D S     ++P HP A+  G V YPNVNV+ E ADM   +R +  
Sbjct: 67  QGEAGQGVQVNGIIEDSSNLEARYEPNHPSADKDGYVYYPNVNVVEEMADMISASRSFQT 126

Query: 114 NLQTIKQSHDMMTTTLDL 131
           N + +  +  MM   L L
Sbjct: 127 NAEIMNTAKSMMQKVLTL 144


>gi|327480018|gb|AEA83328.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri DSM
           4166]
          Length = 147

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 17/139 (12%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           +IA SG++ QS R+  IS NIANA T   +     YR +   F  V   + G   + +  
Sbjct: 8   NIAGSGMSAQSTRLNTISSNIANAETVSSSV-DQTYRARHPVFATVFQQANGQPDQSLFA 66

Query: 69  ----------------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                           DQS     ++P HP A+ +G V YPNVNV+ E ADM   +R + 
Sbjct: 67  GQDQAGVGVQVLGVVEDQSELQARYEPNHPAADEAGYVYYPNVNVVEEMADMISASRAFQ 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N + +  +  M+   L L
Sbjct: 127 TNAELMNTAKTMLQKVLTL 145


>gi|332088752|gb|EGI93864.1| flagellar basal-body rod protein FlgC [Shigella boydii 5216-82]
          Length = 134

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 6/126 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKK 65
           IA S L  QS R+ + + N+ANA + TG  P   PYR K + F+        +GGV+V  
Sbjct: 9   IAGSALTAQSQRLNVAASNLANADSVTG--PDGQPYRAKQVVFQVNAAPGAATGGVKVAD 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++PG+ +A+A G VK PNV+V+ E  +    +R Y AN++ +     MM
Sbjct: 67  VIESQAPDKLVYEPGNQLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMM 126

Query: 126 TTTLDL 131
              L L
Sbjct: 127 LKPLTL 132


>gi|330720177|gb|EGG98566.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC2047]
          Length = 150

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 20/141 (14%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------------- 54
           +A +G++ Q+ R+  ++ NIANA +   + G + YR +   F  +               
Sbjct: 9   VAGTGMSAQTIRLNTVASNIANAESVSSSTG-ETYRARHPVFSVIRDQVNQDMLGGGFNN 67

Query: 55  ----MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
               M    GV+V  I   Q+   +++ P HP A+ +G V YPNV+V+ E ADM   +R 
Sbjct: 68  NFNGMSAGYGVKVDGIVESQAELRQKYQPDHPSADENGYVYYPNVDVVTEMADMISASRA 127

Query: 111 YMANLQTIKQSHDMMTTTLDL 131
           Y  N++ +  +  MM   L L
Sbjct: 128 YQTNVEIMNTAKQMMQRVLTL 148


>gi|149182501|ref|ZP_01860974.1| flagellar basal-body rod protein C [Bacillus sp. SG-1]
 gi|148849761|gb|EDL63938.1| flagellar basal-body rod protein C [Bacillus sp. SG-1]
          Length = 153

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 27/152 (17%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTISFE----- 52
           +  S + + S L+ Q  RM +IS N+ANA TT      G+     PYRRK++ F+     
Sbjct: 3   IFHSMNTSASALSAQRLRMDVISSNMANADTTRGKLVDGEW---QPYRRKSVVFQPNGGQ 59

Query: 53  ------EVMH----GS--GGVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLV 99
                 + M+    GS   GV+V +I  D+ T F   +DP HP AN  G V+ PNV+ L 
Sbjct: 60  FSSFLNKAMNTKDSGSLGNGVKVSEIKEDEETPFNLVYDPEHPDANQDGYVQMPNVDPLR 119

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           E  D+    R Y AN+     +  MM  +L++
Sbjct: 120 EMIDLISATRSYEANVTVFNANKSMMMKSLEI 151


>gi|266621920|ref|ZP_06114855.1| flagellar basal-body rod protein FlgC [Clostridium hathewayi DSM
           13479]
 gi|288866393|gb|EFC98691.1| flagellar basal-body rod protein FlgC [Clostridium hathewayi DSM
           13479]
          Length = 144

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 65/144 (45%), Gaps = 15/144 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           M YL  S +I  S L  +  R  II +N+AN  TT    G  PYRRK ++  E       
Sbjct: 1   MGYL-DSLNITGSALTAERFRTDIILQNLANQNTTRTAEGG-PYRRKQVALRENQLDFKS 58

Query: 54  ------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      GGV V+++   Q+  V  +DP HP AN  G V  PNVN   E  D+   
Sbjct: 59  ELGKAMTKADRGGVYVEEVVESQNPLVPVYDPDHPDANEDGYVMMPNVNSAEEMVDLMAA 118

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y AN+  +  +  M    L++
Sbjct: 119 TRAYEANVTALNIAKSMALKALEI 142


>gi|319649569|ref|ZP_08003725.1| flagellar basal-body rod protein C [Bacillus sp. 2_A_57_CT2]
 gi|317398731|gb|EFV79413.1| flagellar basal-body rod protein C [Bacillus sp. 2_A_57_CT2]
          Length = 150

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 64/137 (46%), Gaps = 18/137 (13%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-----------VMHGSG-- 59
           S L  Q  RM +IS N+ANA +T    G  PYRRK++  E             M   G  
Sbjct: 12  SALTAQRLRMDVISSNMANADSTRSVNGDGPYRRKSVVLEPKEGQFSSFLNMAMSRRGES 71

Query: 60  ----GVRVKKIGVDQSTFVEE-FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
               GV+V +I  D+ T  +  +DP H  AN  G V+ PNV+ L E  D+    R Y AN
Sbjct: 72  SAGNGVKVSRIVEDRETPTKMVYDPTHADANEDGYVEMPNVDPLREMTDLISATRSYEAN 131

Query: 115 LQTIKQSHDMMTTTLDL 131
           +     S  MM   L++
Sbjct: 132 VTVFNASKGMMMKALEI 148


>gi|225871925|ref|YP_002753379.1| flagellar basal-body rod protein FlgC [Acidobacterium capsulatum
           ATCC 51196]
 gi|225793067|gb|ACO33157.1| flagellar basal-body rod protein FlgC [Acidobacterium capsulatum
           ATCC 51196]
          Length = 165

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 34/163 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----------- 52
           L+    ++ S L  +  R ++++ N+ANA TT    G  PY RK + F            
Sbjct: 3   LLGLLDVSGSALEAERIRAEVVAANMANANTTRTASGG-PYLRKEVVFSSQAPEPGAFAN 61

Query: 53  ----------------EVMHGS------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
                           + M G       GGVRV  +  D++  ++ +DP HP A+  G V
Sbjct: 62  QFADQFAGGAEAPVSLQAMAGGMAEPQVGGVRVSAVLTDKNAILKRYDPSHPDADKQGYV 121

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            YP +N + E  D+    R Y  N   ++ + +M+ + L++L+
Sbjct: 122 SYPEINPVTEMVDLMSATRSYGLNSSAVQATKNMINSALEILK 164


>gi|239628951|ref|ZP_04671982.1| flagellar basal-body rod protein FlgC [Clostridiales bacterium
           1_7_47_FAA]
 gi|239519097|gb|EEQ58963.1| flagellar basal-body rod protein FlgC [Clostridiales bacterium
           1_7_47FAA]
          Length = 144

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 15/144 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           M YL  S +I  S L  +  R  II +N+AN  TT    G  PYRRK + F E       
Sbjct: 1   MGYL-DSLNITGSALTAERFRTDIIMQNLANQNTTRTADGG-PYRRKQVVFRENSLNFKS 58

Query: 54  ------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                     +GGV V+++   Q+  V  +DP HP A+  G V  PNVN   E  D+   
Sbjct: 59  ELGKAMTKAENGGVYVEEVVESQNPLVPVYDPDHPDADEDGYVMMPNVNSAEEMVDLMAA 118

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
           +R Y AN+  +  +  M    L++
Sbjct: 119 SRAYEANVTALNIAKSMALKALEI 142


>gi|262394941|ref|YP_003286795.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
 gi|262338535|gb|ACY52330.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
          Length = 137

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 7/129 (5%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSGGVRVK 64
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F       M G   V VK
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMRGGDTVPVK 66

Query: 65  KIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S 
Sbjct: 67  VMGIVESDKPLSAEYNPDHPLANEEGYIYKPNVNVMEEMANMISASRAYQTNVQVADSSK 126

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 127 QMLLRTLQM 135


>gi|28897550|ref|NP_797155.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153839687|ref|ZP_01992354.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|260364609|ref|ZP_05777211.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|260878286|ref|ZP_05890641.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|260898116|ref|ZP_05906612.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|260901951|ref|ZP_05910346.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|5361006|gb|AAD42913.1|U12817_7 polar flagellar FlgC homolog [Vibrio parahaemolyticus]
 gi|28805762|dbj|BAC59039.1| polar flagellar FlgC [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746797|gb|EDM57785.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|308086105|gb|EFO35800.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|308090161|gb|EFO39856.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|308106781|gb|EFO44321.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|308115115|gb|EFO52655.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|328473455|gb|EGF44303.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus
           10329]
          Length = 137

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 7/129 (5%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSGGVRVK 64
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F       M G   V VK
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMRGGDTVPVK 66

Query: 65  KIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S 
Sbjct: 67  VLGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQVADSSK 126

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 127 QMLLRTLQM 135


>gi|119503642|ref|ZP_01625725.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2080]
 gi|119460704|gb|EAW41796.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2080]
          Length = 134

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---G 60
           L  S  IA + L+ Q+ R+  I+ N+ANA +   T   D ++ +   F+ V+ G     G
Sbjct: 3   LFDSMSIAGTALSAQTTRINTIASNMANANSVSST-AEDTFKARAPIFQAVLEGESDQLG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  I        +EF+P HP+AN  G +  P+++V  + A+M   +R + + ++ I  
Sbjct: 62  VRVTSIEEVGGEARQEFEPAHPLANEEGFIYKPDIDVTQQMANMMSASRSFQSAIEVINT 121

Query: 121 SHDMMTTTLDL 131
           S  +   TL L
Sbjct: 122 SKQLALRTLTL 132


>gi|329901228|ref|ZP_08272753.1| Flagellar basal-body rod protein FlgC [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549160|gb|EGF33752.1| Flagellar basal-body rod protein FlgC [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 122

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 5/121 (4%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----SGGVRVKKIGVDQ 70
           ++ Q+ R+ +++ NIANA +T  T G   Y+ K + F  V  G    + GV+V K+  D 
Sbjct: 1   MSAQAQRLNVVASNIANADSTTSTNG-QVYKAKQVVFSAVPVGGDAAASGVKVDKVLEDT 59

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +     +DP HP A+  G V  PNVNV+ E  +M   +R Y  N++T+  +  ++  TL 
Sbjct: 60  AAPRLVYDPKHPQADEKGYVSMPNVNVVEEMVNMISASRSYQTNVETMNAAKTLLLKTLT 119

Query: 131 L 131
           +
Sbjct: 120 I 120


>gi|149375036|ref|ZP_01892809.1| flagellar basal-body rod protein C [Marinobacter algicola DG893]
 gi|149360925|gb|EDM49376.1| flagellar basal-body rod protein C [Marinobacter algicola DG893]
          Length = 149

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 64/138 (46%), Gaps = 16/138 (11%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-----------SFEEVMHGS 58
           IA SG+  QS R+   + NIANA T   +       RK +           S + +  GS
Sbjct: 9   IAGSGMTAQSLRLNTTASNIANAETASSSTDQTYRARKPVFAAIQQSMLNPSQQSLAFGS 68

Query: 59  -----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                 GVRV+ I    +     ++P HP AN  G V YPNVNV+ E ADM  ++R +  
Sbjct: 69  DTGPGAGVRVEGIVESDAELQMRYEPDHPAANEDGYVFYPNVNVVEEMADMMSSSRSFQM 128

Query: 114 NLQTIKQSHDMMTTTLDL 131
           N+  +  +  MM   L L
Sbjct: 129 NVDIMNSAKSMMQRILTL 146


>gi|296135675|ref|YP_003642917.1| flagellar basal-body rod protein FlgC [Thiomonas intermedia K12]
 gi|294339845|emb|CAZ88208.1| Flagellar basal-body rod protein flgC (Putative proximal rod
           protein) [Thiomonas sp. 3As]
 gi|295795797|gb|ADG30587.1| flagellar basal-body rod protein FlgC [Thiomonas intermedia K12]
          Length = 138

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 8/122 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L ++  +ANSGL  +S R+ +++ N+ANA +   + G  PYR + + F        GV  
Sbjct: 3   LFSALDVANSGLTAESYRLNVVASNLANANSAVSSNG-QPYRAREVVFAAQPLSGPGVPA 61

Query: 64  KKIGVDQSTFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV  +  VE+       ++PG+P+AN  G V YPNVN + E  +M   +R Y A++ 
Sbjct: 62  GVNGVQVAGVVEKPGPLKLVYEPGNPLANKDGYVSYPNVNPVDEMVNMISASRAYQADVN 121

Query: 117 TI 118
            +
Sbjct: 122 VM 123


>gi|238916744|ref|YP_002930261.1| flagellar basal-body rod protein FlgC [Eubacterium eligens ATCC
           27750]
 gi|238872104|gb|ACR71814.1| flagellar basal-body rod protein FlgC [Eubacterium eligens ATCC
           27750]
          Length = 164

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 34/161 (21%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHG----- 57
           +  + +++ SG+  Q  R  +ISENIANA TT  + G+ PY RK + F E+ M G     
Sbjct: 1   MFTAFNVSASGMTAQQLRTDVISENIANADTTRTSDGT-PYVRKAVVFTEKTMTGTALGK 59

Query: 58  --------------SGGVRVK------------KIGVDQSTFVEE-FDPGHPVANASGIV 90
                         S  +R+              +  D ST +E  +DP HP A+ +G V
Sbjct: 60  SAYGSYGTGAYSTFSDALRLANGGVVGNGVKVTSVYEDTSTDMEMVYDPSHPDADENGYV 119

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            YPNVN + E  D+ + +R Y AN+     S  M T  L +
Sbjct: 120 TYPNVNTVQEMTDLIDASRSYEANISAFNASKSMATKGLSI 160


>gi|91785636|ref|YP_560842.1| flagellar basal body rod protein FlgC [Burkholderia xenovorans
           LB400]
 gi|296157458|ref|ZP_06840293.1| flagellar basal-body rod protein FlgC [Burkholderia sp. Ch1-1]
 gi|91689590|gb|ABE32790.1| Flagellar basal-body rod protein FlgC [Burkholderia xenovorans
           LB400]
 gi|295892230|gb|EFG72013.1| flagellar basal-body rod protein FlgC [Burkholderia sp. Ch1-1]
          Length = 141

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 16/134 (11%)

Query: 10  IANSGLAVQSARMQIISENIANA-RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           +A S ++ QS R+ + + N+ANA  TTG  P   PY+ K + F   +   GG R      
Sbjct: 10  VAGSAMSAQSQRLNVTASNLANADSTTG--PDGQPYKAKQVVF--AVSPLGGARTASGQQ 65

Query: 69  -----------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                      D +     +DPG+P ANA G V  PNV+ + E  +M   +R Y AN++T
Sbjct: 66  VGGVQVTGVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVET 125

Query: 118 IKQSHDMMTTTLDL 131
           +  +  +M  TL +
Sbjct: 126 LNTAKTLMLKTLTI 139


>gi|226225740|ref|YP_002759846.1| flagellar basal-body rod protein FlgC [Gemmatimonas aurantiaca
           T-27]
 gi|226088931|dbj|BAH37376.1| flagellar basal-body rod protein FlgC [Gemmatimonas aurantiaca
           T-27]
          Length = 183

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 74/184 (40%), Gaps = 54/184 (29%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           M  +  S  IA SG++ Q  RM+ I++NIANA  T  T G+ PY+R+ +  E        
Sbjct: 1   MRPMFKSMGIAASGISAQRQRMETIAQNIANADVTRGTDGT-PYKRREVVLESATAQNAL 59

Query: 54  ----------------------------------------------VMHGSGGVRVKKIG 67
                                                         VM G  GVRV  + 
Sbjct: 60  FNPGNVTAQTLGNQNVAGAPAFEVPITDAAQTFQVPVLPVTGGADGVMGGEFGVRVAGVA 119

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            DQ      ++PGHP A+ +G V+YP+++   E   + +  R+Y AN    + +  M+  
Sbjct: 120 EDQGEGRLVYEPGHPDADGNGYVRYPDIDTTQELVKLMDAKRIYEANAAVFQTAKSMLRA 179

Query: 128 TLDL 131
            LD+
Sbjct: 180 ALDI 183


>gi|296103613|ref|YP_003613759.1| Flagellar basal-body rod protein, FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058072|gb|ADF62810.1| Flagellar basal-body rod protein, FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 134

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L +   I+ S +A QS R+ + + N+ANA +    P   PYR + + F     V    GG
Sbjct: 3   LFSVFDISGSAMAAQSRRLNVSASNMANADSVAG-PDGQPYRARQVVFSVDASVGQEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +    +     ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  
Sbjct: 62  VQVSDVVESSAPDRLVYEPGNPLADEQGYVRMPNVNVMNEMVNTISASRSYQANVEVMNS 121

Query: 121 SHDMMTTTLDL 131
           +  +M  TL L
Sbjct: 122 AKSLMLKTLTL 132


>gi|157376218|ref|YP_001474818.1| flagellar basal body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
 gi|157318592|gb|ABV37690.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
          Length = 138

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGV 61
           ++A SG++ QS R+   + NIANA     +   + YR +   FE  M         S  V
Sbjct: 8   NVAGSGMSAQSVRLNTTASNIANADAVSSSV-DETYRARHPIFEAEMAKASHQQQSSQAV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            VK I    +   +E+ P HP+A+  G +  PNVNV+ E A+M   +R Y  N+Q  + +
Sbjct: 67  AVKGIVESDAPLQKEYSPDHPMADGDGFIYKPNVNVMEEMANMISASRSYQMNVQVAEAA 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KSMLQQTLRI 136


>gi|91225871|ref|ZP_01260840.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
 gi|91189521|gb|EAS75797.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
          Length = 137

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 7/129 (5%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSGGVRVK 64
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F       M G   V VK
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMRGGDTVPVK 66

Query: 65  KIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S 
Sbjct: 67  VMGIVESDKPLNAEYNPDHPLANEEGYIYKPNVNVMEEMANMISASRAYQTNVQVADSSK 126

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 127 QMLLRTLQM 135


>gi|152975156|ref|YP_001374673.1| flagellar basal body rod protein FlgC [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023908|gb|ABS21678.1| flagellar basal-body rod protein FlgC [Bacillus cytotoxicus NVH
           391-98]
          Length = 137

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 10/129 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--------GVRVK 64
           SGL      M++ S+NI NA TT   P  +PYRR+++  E   + +         GV++ 
Sbjct: 10  SGLTAARKWMEVSSDNIVNANTTS-APDGEPYRRRSVVLESNRNFASMLKEAPNDGVKIT 68

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +I  D +  +  ++P HP ANA G V+YPN+++  E  ++    ++Y AN   +  +  M
Sbjct: 69  RIESDPNENLV-YNPSHPHANAEGYVRYPNIDMTAEMTNVMVAQKMYEANTSVLNANKKM 127

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 128 LDKDLEIGR 136


>gi|295678060|ref|YP_003606584.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1002]
 gi|295437903|gb|ADG17073.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1002]
          Length = 141

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 16/134 (11%)

Query: 10  IANSGLAVQSARMQIISENIANA-RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK--- 65
           +A S ++ QS R+ + + N+ANA  TTG  P   PY+ K + F   ++  GG R +    
Sbjct: 10  VAGSAMSAQSERLNVTASNLANADSTTG--PDGQPYKAKQVIF--AVNPIGGARTRSGQQ 65

Query: 66  --------IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                   +  D S     +DPG+P A+A+G V  PNV+ + E  +M   +R Y AN++T
Sbjct: 66  VGGVRVTGVVDDPSPMKTAYDPGNPAADANGYVTLPNVDPVQEMVNMISASRSYQANVET 125

Query: 118 IKQSHDMMTTTLDL 131
           +  +  +M  TL +
Sbjct: 126 LNTAKTLMLKTLTI 139


>gi|319787123|ref|YP_004146598.1| flagellar basal-body rod protein FlgC [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465635|gb|ADV27367.1| flagellar basal-body rod protein FlgC [Pseudoxanthomonas suwonensis
           11-1]
          Length = 135

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 5/128 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----GVRVKK 65
           +A S L  QS R+  I+ N+ANA     +P +  Y+     F+    GS     GVRV++
Sbjct: 9   VAGSALQAQSVRLSTIASNLANADAVAGSPEAV-YKPLEPVFQAQASGSDPALTGVRVRE 67

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I    +  V  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ I  + ++ 
Sbjct: 68  IAQSDAPPVRRYEPGHPLADADGYVFAPDVDPVSQMVNMISASRSYQAGVEIINTAKELA 127

Query: 126 TTTLDLLR 133
             TL + R
Sbjct: 128 IATLSMGR 135


>gi|307731365|ref|YP_003908589.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1003]
 gi|307585900|gb|ADN59298.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1003]
          Length = 141

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 16/134 (11%)

Query: 10  IANSGLAVQSARMQIISENIANA-RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           +A S ++ QS R+ + + N+ANA  TTG  P   PY+ K + F   +   GG R      
Sbjct: 10  VAGSAMSAQSQRLNVTASNLANADSTTG--PDGQPYKAKQVVF--AVAPLGGARTGSGQQ 65

Query: 69  -----------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                      D +     +DPG+P ANA G V  PNV+ + E  +M   +R Y AN++T
Sbjct: 66  VGGVQVTGVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVET 125

Query: 118 IKQSHDMMTTTLDL 131
           +  +  +M  TL +
Sbjct: 126 LNTAKTLMLKTLTI 139


>gi|54308095|ref|YP_129115.1| flagellar basal body rod protein FlgC [Photobacterium profundum
           SS9]
 gi|46912521|emb|CAG19313.1| Putative flagellar basal body rod protein FlgC [Photobacterium
           profundum SS9]
          Length = 138

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           ++  S ++ +S R+   S N+ANA +   +   + YR +   F   ++ +   R + + V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANANSVSSS-AEETYRARHPIFAAALNSASYQRAESVPV 66

Query: 69  DQSTFVE-------EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                VE       E++P HP+AN  G +  PNVNV+ E A+M   +R Y +N+Q    S
Sbjct: 67  QVKGIVESQKPLRAEYNPQHPLANDEGYIYKPNVNVMEEMANMISASRSYQSNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+ +TL +
Sbjct: 127 KQMLMSTLQM 136


>gi|153834459|ref|ZP_01987126.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|163802605|ref|ZP_02196497.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
 gi|148869155|gb|EDL68187.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|159173688|gb|EDP58507.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
          Length = 137

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 7/129 (5%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSGGVRVK 64
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F       M G   V VK
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMRGGDTVPVK 66

Query: 65  KIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S 
Sbjct: 67  VMGIVESDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQVADSSK 126

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 127 QMLLRTLQM 135


>gi|209521587|ref|ZP_03270285.1| flagellar basal-body rod protein FlgC [Burkholderia sp. H160]
 gi|209497970|gb|EDZ98127.1| flagellar basal-body rod protein FlgC [Burkholderia sp. H160]
          Length = 141

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 16/134 (11%)

Query: 10  IANSGLAVQSARMQIISENIANA-RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           +A S ++ QS R+ + + N+ANA  TTG  P   PY+ K + F   ++  GG R      
Sbjct: 10  VAGSAMSAQSERLNVTASNLANADSTTG--PDGQPYKAKQVVF--AVNPLGGARSGSGQQ 65

Query: 69  -----------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                      D S     ++PG+P ANA G V  PNV+ + E  +M   +R Y AN++T
Sbjct: 66  VGGVQVTGVVDDPSPMKTAYEPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVET 125

Query: 118 IKQSHDMMTTTLDL 131
           +  +  +M  TL +
Sbjct: 126 LNTAKTLMLKTLTI 139


>gi|323703167|ref|ZP_08114820.1| flagellar basal-body rod protein FlgC [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531826|gb|EGB21712.1| flagellar basal-body rod protein FlgC [Desulfotomaculum nigrificans
           DSM 574]
          Length = 145

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 12/142 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTG--DTPGSDPYRRKTISFEEVMHGS--- 58
           L  S  I+ SG+  +  R+ +I+ N+AN  T G  + P +  YRR+   F E +  +   
Sbjct: 3   LFDSFAISASGMTSERLRLDLIANNVANMNTAGRPNDPNNPVYRRRVPVFAEQLRQTMAA 62

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GVRVK I  D +      +P +P+A+  G V YPN+N++ E  DM   +R Y
Sbjct: 63  NSTEPRGAGVRVKAIVEDPAPPRIVHEPDNPLADQDGNVAYPNINIVNEMVDMITASRAY 122

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  +  +  M    L++ R
Sbjct: 123 EANVTALNAAKSMALKALEISR 144


>gi|301631992|ref|XP_002945075.1| PREDICTED: flagellar basal-body rod protein flgC-like [Xenopus
           (Silurana) tropicalis]
          Length = 134

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKK 65
           +++ S ++ QS R+ +++ N+AN       P    Y+ + + F+    GS    GVRV+ 
Sbjct: 8   NVSGSAISAQSQRLNVVASNLANVDAVAG-PDGQAYKARQVVFQTTPMGSDSAAGVRVRS 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I   Q      FDPGHP A+  G V + NVN + E  +M   +R Y  N++ +  +  ++
Sbjct: 67  IEESQVPGRRVFDPGHPSADGEGYVNHSNVNAVEEMVNMISASRSYQNNVEVMNTAKTLL 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 LKTLQM 132


>gi|304404242|ref|ZP_07385904.1| flagellar basal-body rod protein FlgC [Paenibacillus
           curdlanolyticus YK9]
 gi|304347220|gb|EFM13052.1| flagellar basal-body rod protein FlgC [Paenibacillus
           curdlanolyticus YK9]
          Length = 149

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 68/138 (49%), Gaps = 17/138 (12%)

Query: 13  SGLAVQSARMQIISENIANARTT--GDTPGSD-PYRRKTI-------SFEEVMHG----- 57
           S L  Q  RM +IS NIANA TT  G   G   PY RK +       SF +V+ G     
Sbjct: 12  SALTAQRLRMDVISSNIANAETTRAGYVNGKFVPYTRKMVVMEPANKSFSDVLSGQMNGT 71

Query: 58  --SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             + GV+V KI  D++     ++P HP A+  G V  PNV++  E  DM   +R Y AN+
Sbjct: 72  AANPGVKVTKIVEDKTPPKLVYNPSHPDADEFGYVSMPNVDIAKEMIDMISASRSYEANI 131

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M    L++ R
Sbjct: 132 TALNATKGMFAKALEIGR 149


>gi|288940407|ref|YP_003442647.1| flagellar basal-body rod protein FlgC [Allochromatium vinosum DSM
           180]
 gi|288895779|gb|ADC61615.1| flagellar basal-body rod protein FlgC [Allochromatium vinosum DSM
           180]
          Length = 139

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 7/125 (5%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG------VRVKKI 66
           S L  QS R+  ++ N+ANA  T  T   D YR K + F+ V+           VRV  I
Sbjct: 13  SALTAQSVRLNTVASNMANAAMTAST-AEDTYRAKHVLFQTVIDQEDPNGVAMPVRVAGI 71

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D+   +  ++P HP AN  G V  P +NV+ E A+M   +R Y AN++ +  +  ++ 
Sbjct: 72  VDDECEPIPTYEPNHPHANEEGYVFRPAINVVEEMANMMSASRSYEANVEVLTTARSLLQ 131

Query: 127 TTLDL 131
            TL +
Sbjct: 132 RTLQV 136


>gi|146281769|ref|YP_001171922.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri A1501]
 gi|145569974|gb|ABP79080.1| flagellar basal-body rod protein FlgC [Pseudomonas stutzeri A1501]
          Length = 134

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 17/133 (12%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-------------- 60
           ++ QS R+  IS NIANA T   +     YR +   F  V   +GG              
Sbjct: 1   MSAQSTRLNTISSNIANAETVSSSV-DQTYRARHPVFATVFQQAGGQPNESLFAGQDQAG 59

Query: 61  VRVKKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+ +GV  DQ      ++P HP A+ SG V YPNVNV+ E ADM   +R +  N + +
Sbjct: 60  AGVQVLGVVEDQGELQARYEPNHPAADESGYVYYPNVNVVEEMADMISASRAFQTNAELM 119

Query: 119 KQSHDMMTTTLDL 131
             +  M+   L L
Sbjct: 120 NTAKTMLQKVLTL 132


>gi|170737036|ref|YP_001778296.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
 gi|169819224|gb|ACA93806.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
          Length = 132

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 8/128 (6%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           + IA S L+ Q+ R+  I+ N+ANA T+G    +  YR +   F  V   +GG RV+ + 
Sbjct: 7   SQIAGSALSAQTVRLNTIASNLANAGTSGTEETA--YRARKPVFASVFQ-NGGARVQVLD 63

Query: 68  V--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           V           +PGHP+A+ +G+V Y NV+ + E ADM   +R +  N++ + +   M 
Sbjct: 64  VIATDDALAARHEPGHPLADENGMVFYSNVSAVEEMADMMAASRAFSTNVEVLTRIKGMQ 123

Query: 126 TTTLDLLR 133
               DLLR
Sbjct: 124 Q---DLLR 128


>gi|83647175|ref|YP_435610.1| flagellar basal body rod protein FlgC [Hahella chejuensis KCTC
           2396]
 gi|83635218|gb|ABC31185.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
           2396]
          Length = 145

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 15/136 (11%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------------- 56
           IA SG+  QS R+   + N+ANA T   +     YR +   F  V               
Sbjct: 9   IAGSGMTAQSVRLNTTASNLANADTASSSIDQ-TYRARKPIFAAVHQDALNAAIPPSIND 67

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             S GV V+ I    ++    + P HP+A+A G V YPNVNV+ E ADM   +R +  N+
Sbjct: 68  DASRGVEVRAIVESDASLERRYQPDHPMADADGYVFYPNVNVVEEMADMMSASRSFQTNV 127

Query: 116 QTIKQSHDMMTTTLDL 131
           + +  +  MM   L +
Sbjct: 128 EVLNSAKTMMQRLLTI 143


>gi|297584033|ref|YP_003699813.1| flagellar basal-body rod protein FlgC [Bacillus selenitireducens
           MLS10]
 gi|297142490|gb|ADH99247.1| flagellar basal-body rod protein FlgC [Bacillus selenitireducens
           MLS10]
          Length = 142

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 27/139 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTISFE----- 52
           +    +++ SGL  Q  RM ++S N+ANA +T      G+    +PYRRK ++FE     
Sbjct: 1   MFHGMNVSASGLTSQRLRMDVVSSNMANAESTRGRFVDGEW---EPYRRKMVTFEPNRTS 57

Query: 53  ------EVMHG-------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
                    H          GV+V +I  D+S F   +DP HP AN  G V+ PNV+ L 
Sbjct: 58  GSRFQDHFRHAVNRNATTGDGVKVGEIIEDESPFRMRYDPDHPDANEDGYVELPNVDPLK 117

Query: 100 ETADMRETNRLYMANLQTI 118
           E  D+    R Y A + + 
Sbjct: 118 EMIDLMSATRSYEAGVTSF 136


>gi|291059787|gb|ADD72522.1| flagellar basal-body rod protein FlgC [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 152

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L +  +IA +G++ Q  R  +IS+NIANA +T    G   +RR  +              
Sbjct: 4   LFSGINIAATGMSAQRLRADVISDNIANASSTRTQEGG-VFRRSRVVLAQKNPGIDWRIP 62

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETAD 103
              E++  G G GVRV  I  D +     +DP HP A  SG     V+YPNV+++ E  D
Sbjct: 63  FVPEQLDRGVGTGVRVVSIEKDNAPSRLVYDPTHPDAILSGPKAGYVEYPNVDIVTEMVD 122

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y AN+  I  S +M    L++ R
Sbjct: 123 LISASRAYEANISVISGSKEMFQRALEIAR 152


>gi|187925763|ref|YP_001897405.1| flagellar basal body rod protein FlgC [Burkholderia phytofirmans
           PsJN]
 gi|187716957|gb|ACD18181.1| flagellar basal-body rod protein FlgC [Burkholderia phytofirmans
           PsJN]
          Length = 141

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 16/134 (11%)

Query: 10  IANSGLAVQSARMQIISENIANA-RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           +A S ++ QS R+ + + N+ANA  TTG  P   PY+ K + F   +   GG R      
Sbjct: 10  VAGSAMSAQSQRLNVTASNLANADSTTG--PDGQPYKAKQVVF--AVSPLGGARTASGQQ 65

Query: 69  -----------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                      D +     +DPG+P AN+ G V  PNV+ + E  +M   +R Y AN++T
Sbjct: 66  VGGVQVTGVVDDPTPMKTAYDPGNPAANSDGYVTLPNVDPVQEMVNMISASRSYQANVET 125

Query: 118 IKQSHDMMTTTLDL 131
           +  +  +M  TL +
Sbjct: 126 LNTAKTLMLKTLTI 139


>gi|323490140|ref|ZP_08095360.1| flagellar basal body rod protein FlgC [Planococcus donghaensis
           MPA1U2]
 gi|323396188|gb|EGA89014.1| flagellar basal body rod protein FlgC [Planococcus donghaensis
           MPA1U2]
          Length = 151

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 25/150 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTISFEE---- 53
           L    +I++SGL     RM ++S NIANA T       G+     PYRRKT+   +    
Sbjct: 3   LFTGFNISSSGLTANRLRMDVVSANIANANTNRAELVDGEWM---PYRRKTVELSQSGTS 59

Query: 54  ---------VMHGSG---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                    +  G+    GV+   I  DQ+ F   +DP HP A   G V+  NV+ L E 
Sbjct: 60  PFSNQLQSAINRGNTAVTGVKASGIKEDQTPFTLRYDPEHPDAGEDGYVRMSNVDPLQEM 119

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            D+    R Y AN+  +  S  M    L++
Sbjct: 120 VDLMSATRSYEANVTALNASKSMFMKALEI 149


>gi|302338075|ref|YP_003803281.1| flagellar basal-body rod protein FlgC [Spirochaeta smaragdinae DSM
           11293]
 gi|301635260|gb|ADK80687.1| flagellar basal-body rod protein FlgC [Spirochaeta smaragdinae DSM
           11293]
          Length = 152

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 22/151 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           L +S ++A +G++ Q  R+ ++S+NIANA +T  TP   P+RR  + F            
Sbjct: 3   LFSSINVAATGMSAQRLRLDVVSDNIANA-STARTPEGGPFRRSRVIFRARNSQPYWRSP 61

Query: 54  -----VMHGSG-GVRVKKIGVDQSTFVE-EFDPGHPVA----NASGIVKYPNVNVLVETA 102
                + +G G GVRV  +  D     +  +DP HP A       G V+ PNVN++ E  
Sbjct: 62  FLPTALDNGVGRGVRVASVQKDMDAKPKLVYDPTHPDAIQTGPKKGYVEMPNVNIVEEMV 121

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           DM   +R Y AN+  +  S  M    L++ R
Sbjct: 122 DMMSASRSYEANVAVVNGSKAMFMRALEIGR 152


>gi|89075493|ref|ZP_01161904.1| Putative flagellar basal body rod protein FlgC [Photobacterium sp.
           SKA34]
 gi|89048765|gb|EAR54336.1| Putative flagellar basal body rod protein FlgC [Photobacterium sp.
           SKA34]
          Length = 138

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-----HGSGGVRV 63
           ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F   +     H S  V V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANANSVSSS-AEETYKARHPIFAAALNSASYHQSSSVPV 66

Query: 64  KKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +  G+ +S      E++P HP+ANA G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  QVKGIIESDKPLSAEYNPEHPMANAEGFIYKPNVNVMEEMANMISASRSYQNNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KQMLMKTLQM 136


>gi|188592115|ref|YP_001796713.1| flgc: flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
           19424]
 gi|170938489|emb|CAP63476.1| FlgC: Flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
           19424]
          Length = 122

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 5/121 (4%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GGVRVKKIGVDQ 70
           +A QS RM + + N+ANA +   +P    YR K + F           GGV+V+ +  D 
Sbjct: 1   MAAQSQRMNVTASNLANADSV-VSPDGQAYRAKQVVFGMAPTPGQTDIGGVQVQGVSEDP 59

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           S      +P HP+ANA G V  PNVN + E  +M   +R Y AN++ +  + +MM  TL 
Sbjct: 60  SPPRMVHNPTHPMANAQGYVVMPNVNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLT 119

Query: 131 L 131
           +
Sbjct: 120 I 120


>gi|291613036|ref|YP_003523193.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus
           ES-1]
 gi|291583148|gb|ADE10806.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus
           ES-1]
          Length = 134

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 6/127 (4%)

Query: 9   HIANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEV-MHG--SGGVRVK 64
           +IA S +  QS R+ +++ N+AN  + TG  P   PY+ K + F  V + G    GV+V 
Sbjct: 8   NIAGSAMTAQSQRLNVVASNLANVDSATG--PDGKPYKAKQVVFSTVPITGQVGEGVKVA 65

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D S     +DP +P+A+  G V  PNVN + E  +M   +R Y  N+  +  S  +
Sbjct: 66  AVVEDNSPMKTVYDPKNPLADGQGYVTMPNVNPVDEMVNMISASRSYQNNVDVLNTSKTL 125

Query: 125 MTTTLDL 131
           +T TL +
Sbjct: 126 LTKTLTI 132


>gi|163750572|ref|ZP_02157810.1| flagellar basal-body rod protein FlgC [Shewanella benthica KT99]
 gi|161329727|gb|EDQ00716.1| flagellar basal-body rod protein FlgC [Shewanella benthica KT99]
          Length = 139

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 6/129 (4%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------HGSGGVR 62
           ++A SG++ QS R+   + NIANA +   +       R  I   E++        S  V 
Sbjct: 8   NVAGSGMSAQSIRLNTTASNIANADSVSSSVDKTYRARHPIFAAEMLKASYQQQSSPSVV 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           VK I    +  ++E+ P HP+A+  G +  PNVNV+ E A+M   +R Y  N+Q  + + 
Sbjct: 68  VKGIVESDAPLLKEYSPNHPMADGDGFIYKPNVNVMEEMANMISASRSYQMNVQVAEAAK 127

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 128 SMLQQTLRI 136


>gi|116619479|ref|YP_821635.1| flagellar basal-body rod protein FlgC [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116222641|gb|ABJ81350.1| flagellar basal-body rod protein FlgC [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 144

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 14/143 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L +   +  SG++ Q AR +++ EN+ANA TT  TP   PYRRK + FE     S    V
Sbjct: 3   LFSLLSVGASGMSAQRARAELLVENLANAETT-RTPEGGPYRRKDVVFETTTTASPFASV 61

Query: 64  KKIGVDQSTFV-------------EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
               +     V               + PGHP A+  G V +P +N   +  D+   +R 
Sbjct: 62  FNSELQSVNGVGVSDVVVDSSDPERRYMPGHPDADKDGYVAFPKINTAEDMVDLMGASRS 121

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           + AN+  +    DM+  ++DL R
Sbjct: 122 FEANVAAMSAVKDMIQRSIDLAR 144


>gi|262276419|ref|ZP_06054228.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
 gi|262220227|gb|EEY71543.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
          Length = 136

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 6/128 (4%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-----GSGGVRV 63
           ++  S ++ +S R+   S N+ANA +   +  ++ Y+ +   F   ++      S  V+V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANANSVSSS-AAETYKARHPVFAAELNRFQQGASVPVQV 66

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           K I   Q     E++P HP+ANA G +  PNVNV+ E A+M   +R Y  N++  + S  
Sbjct: 67  KGIVESQKPLRAEYNPEHPMANADGYIYKPNVNVMEEMANMISASRSYQTNVEVAEASKQ 126

Query: 124 MMTTTLDL 131
           M+  TL +
Sbjct: 127 MLMRTLQM 134


>gi|187926956|ref|YP_001893301.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12J]
 gi|241665285|ref|YP_002983644.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12D]
 gi|187728710|gb|ACD29874.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12J]
 gi|240867312|gb|ACS64972.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12D]
          Length = 135

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 7/127 (5%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVMHG---SGGVRVKK 65
           +A S L  QS RM +++ N+ANA + TG  P    YR K + F  V      + GV V +
Sbjct: 9   VAGSALTAQSKRMNVVASNLANAESVTG--PNGTAYRAKQVVFTPVQESDDYATGVSVDR 66

Query: 66  IGVDQSTFVEEF-DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  D  T ++    PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++    +  M
Sbjct: 67  VVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTM 126

Query: 125 MTTTLDL 131
               L L
Sbjct: 127 AAKALTL 133


>gi|90411003|ref|ZP_01219017.1| flagellar basal body rod protein [Photobacterium profundum 3TCK]
 gi|90328216|gb|EAS44527.1| flagellar basal body rod protein [Photobacterium profundum 3TCK]
          Length = 138

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F   ++ +   R + + V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANANSVSSS-AEETYKARHPIFAAALNSASYQRAESVPV 66

Query: 69  DQSTFVE-------EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                VE       E++P HP+AN  G +  PNVNV+ E A+M   +R Y +N+Q    S
Sbjct: 67  QVKGIVESQKPLRAEYNPQHPLANDEGYIYKPNVNVMEEMANMISASRSYQSNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+ +TL +
Sbjct: 127 KQMLMSTLQM 136


>gi|330445346|ref|ZP_08308998.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489537|dbj|GAA03495.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 138

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GV 61
           ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F   +  +         V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANANSVSSS-AEETYKARHPIFAAALESASYNREDSVPV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +VK I   +     E++P HP+ANA G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  QVKGIVESERPLTAEYNPDHPMANAQGFIYKPNVNVMEEMANMISASRSYQNNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KQMLMKTLQM 136


>gi|170725953|ref|YP_001759979.1| flagellar basal body rod protein FlgC [Shewanella woodyi ATCC
           51908]
 gi|169811300|gb|ACA85884.1| flagellar basal-body rod protein FlgC [Shewanella woodyi ATCC
           51908]
          Length = 139

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-------V 61
           +++ SG++ QS R+   + NIANA +   +   + YR +   FE  M  +         V
Sbjct: 9   NVSGSGMSAQSVRLNTTASNIANADSVSSSI-DETYRARHPIFEAEMAKASHQQQSSQSV 67

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            VK I    +   +E+ P HP+A+  G +  PNVNV+ E ADM   +R Y  N+Q  + +
Sbjct: 68  AVKGIVESDAPLQKEYSPNHPMADTDGFIYKPNVNVMEEMADMISASRSYQMNVQVAEAA 127

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 128 KSMLQQTLRI 137


>gi|257095361|ref|YP_003169002.1| flagellar basal-body rod protein FlgC [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047885|gb|ACV37073.1| flagellar basal-body rod protein FlgC [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 134

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 4/113 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKK 65
            +A S L  QS R+  ++ N+ANA +   + G  PYR K + F     GS    GVRVK+
Sbjct: 8   QVAGSALTAQSLRLNAVASNLANADSVVGSDGK-PYRAKQVVFVATPMGSPAAEGVRVKQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           +  D S     +DP +P A+  G V  PNVNV+ E  +M   +R Y  N++ +
Sbjct: 67  VVEDSSPGRRVYDPRNPAADDRGYVTMPNVNVVDEMTNMISASRSYQTNVEVM 119


>gi|300870979|ref|YP_003785850.1| flagellar basal body rod protein FlgC [Brachyspira pilosicoli
           95/1000]
 gi|300688678|gb|ADK31349.1| flagellar basal body rod protein, FlgC [Brachyspira pilosicoli
           95/1000]
          Length = 153

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 71/148 (47%), Gaps = 26/148 (17%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--------- 59
           + + SGL  Q  R+ +I++NIAN  TT  T G   +RR  + F+    G+          
Sbjct: 8   NTSGSGLTAQRTRLDVIADNIANVNTTRTTEGG-AFRRSRVVFKPRDDGNKYRSPFLPEA 66

Query: 60  -------GVRVKKIGVDQST---FVEEFDPGHPVA----NASGIVKYPNVNVLVETADMR 105
                  GVRV  I  D  T   FV  +DP HP A      +G V+ PNVN + E  DM 
Sbjct: 67  LQPNVGTGVRVFSIEKDMETATRFV--YDPSHPDAIKYGEKAGYVEMPNVNPVTEMVDMM 124

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           E +R Y AN   I+ +  M  + L+++R
Sbjct: 125 EASRAYEANSTMIQSAKTMFGSALNIIR 152


>gi|262404542|ref|ZP_06081097.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC586]
 gi|262349574|gb|EEY98712.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC586]
          Length = 138

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 8/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-----EEVMHGS 58
           L +  ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F     +   +  
Sbjct: 3   LFSVFNVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKARFNRE 61

Query: 59  GGVRVKKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             V VK +G+ +S    V EF+P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  PNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDL 131
               S  M+  TL +
Sbjct: 122 VADASKQMLLRTLQM 136


>gi|258514001|ref|YP_003190223.1| flagellar basal-body rod protein FlgC [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777706|gb|ACV61600.1| flagellar basal-body rod protein FlgC [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 140

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--------SGGVRVKKIGVDQSTF 73
           + IIS NIAN  TT    G  PY+R+   F + +          +GGV V ++  D +  
Sbjct: 21  LDIISNNIANLNTTRTAKGG-PYKRQMPVFSQRLQSVVDSAKTRAGGVEVNRVVQDNAPP 79

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +DP HP A+  G V YPN+N++ E  +M    R Y AN   ++ S  M    L++ R
Sbjct: 80  RMVYDPSHPDADQEGNVAYPNINIVNEMVNMMAARRAYEANATALEASKSMAMKALEIGR 139


>gi|332284017|ref|YP_004415928.1| flagellar basal body rod protein FlgC [Pusillimonas sp. T7-7]
 gi|330427970|gb|AEC19304.1| flagellar basal body rod protein FlgC [Pusillimonas sp. T7-7]
          Length = 138

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            IA S L  QS RM + + N+ANA +    P   PYR + + F+              GV
Sbjct: 8   QIAGSALTAQSQRMNVTASNLANADSVAG-PDGQPYRARQVVFQMAPVAGQSQAAAVGGV 66

Query: 69  DQSTFVE-------EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             +  VE       ++DP +P+AN  G V  PNV+V+ ET +M   +R Y AN++ I  +
Sbjct: 67  RVAAVVESAAPPRLQYDPKNPLANDDGYVTMPNVDVVAETVNMISASRSYQANVEVINTA 126

Query: 122 HDMMTTTLDL 131
             +M  TL +
Sbjct: 127 KSLMMRTLSI 136


>gi|160939631|ref|ZP_02086979.1| hypothetical protein CLOBOL_04523 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437422|gb|EDP15186.1| hypothetical protein CLOBOL_04523 [Clostridium bolteae ATCC
           BAA-613]
          Length = 144

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 67/144 (46%), Gaps = 15/144 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           M YL  S +I  S L  +  R  II +N+AN  TT    G  PY+RK + F E       
Sbjct: 1   MGYL-DSLNITGSALTAERFRTDIIMQNLANQNTTRTAEGG-PYKRKQVVFRENTLNFKS 58

Query: 54  ------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                     +GGV V+++   Q+  V  +DP HP A+  G V  PNVN   E  D+   
Sbjct: 59  ELGKAMTKAENGGVFVEEVVESQNPSVPVYDPDHPDADEDGYVMMPNVNSAEEMVDLMAA 118

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
           +R Y AN+  +  +  M    L++
Sbjct: 119 SRAYEANVTALNVAKSMALKALEI 142


>gi|149178731|ref|ZP_01857314.1| flagellar basal-body rod potein FlgC [Planctomyces maris DSM 8797]
 gi|148842429|gb|EDL56809.1| flagellar basal-body rod potein FlgC [Planctomyces maris DSM 8797]
          Length = 137

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 7/130 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGD-TPGSDPYRRKTISF----EEVMHGSGGVRVK 64
           I+ S L  Q  RM  I+ NIA    + D   G +P+ R+ ++F    E +   + G  VK
Sbjct: 7   ISTSALVAQRQRMNTIAGNIAAVNVSHDPASGEEPFYRRMVTFQADTESLDQNASGTGVK 66

Query: 65  -KIGVDQSTFVEE-FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             + +D  T + + +DPGH  A+  G V YPN++++ E  +  E  R Y AN+  +  + 
Sbjct: 67  YHVEIDTDTPLRKTYDPGHRHADQDGNVTYPNIDLVTEFVNALEAGRAYEANISALDITK 126

Query: 123 DMMTTTLDLL 132
           +M +T+L +L
Sbjct: 127 EMFSTSLRIL 136


>gi|296127542|ref|YP_003634794.1| flagellar basal-body rod protein FlgC [Brachyspira murdochii DSM
           12563]
 gi|296019358|gb|ADG72595.1| flagellar basal-body rod protein FlgC [Brachyspira murdochii DSM
           12563]
          Length = 153

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 71/148 (47%), Gaps = 26/148 (17%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--------- 59
           + + SGL  Q  R+ +I++NIAN  TT  T G   +RR  + F+    G+          
Sbjct: 8   NTSGSGLTAQRTRLDVIADNIANVNTTRTTEGG-AFRRSRVIFKPRDDGNKYRSPFLPEA 66

Query: 60  -------GVRVKKIGVDQST---FVEEFDPGHPVA----NASGIVKYPNVNVLVETADMR 105
                  GVRV  I  D  T   FV  +DP HP A      +G V+ PNVN + E  DM 
Sbjct: 67  LQPNVGTGVRVFSIEKDMETATRFV--YDPSHPDAIKYGEKAGYVEMPNVNPVTEMVDMM 124

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           E +R Y AN   I+ +  M  + L+++R
Sbjct: 125 EASRAYEANSTMIQSAKTMFGSALNIIR 152


>gi|34497157|ref|NP_901372.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
 gi|34103014|gb|AAQ59377.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
          Length = 134

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVRVKKI 66
           + IA S +  Q+ R+  ++ NIANA T      S  YR +   F   M G G GV+V  +
Sbjct: 7   SRIAGSAMTAQTVRLNTVASNIANADTASGAEQS-AYRGRKPVFSSQMQGEGMGVQVLDV 65

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             +Q    +  +PG+P+A+A G V Y NVN + E  DM    R +  N++ + +   M  
Sbjct: 66  VQNQEPVRKAHEPGNPLADADGNVFYSNVNAVEEMTDMLSATRAFQTNVEVLAKVKTMQQ 125

Query: 127 TTLDL 131
             L L
Sbjct: 126 DLLKL 130


>gi|153213630|ref|ZP_01948903.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 1587]
 gi|153825350|ref|ZP_01978017.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-2]
 gi|153829337|ref|ZP_01982004.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 623-39]
 gi|183179563|ref|ZP_02957774.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-3]
 gi|229513843|ref|ZP_04403305.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TMA 21]
 gi|229522148|ref|ZP_04411565.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TM 11079-80]
 gi|229524194|ref|ZP_04413599.1| flagellar basal-body rod protein FlgC [Vibrio cholerae bv. albensis
           VL426]
 gi|229528796|ref|ZP_04418186.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 12129(1)]
 gi|254286492|ref|ZP_04961449.1| flagellar basal-body rod protein FlgC [Vibrio cholerae AM-19226]
 gi|258621047|ref|ZP_05716081.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM573]
 gi|258625275|ref|ZP_05720183.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM603]
 gi|261211324|ref|ZP_05925612.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC341]
 gi|262170823|ref|ZP_06038501.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
 gi|262191691|ref|ZP_06049867.1| flagellar basal-body rod protein FlgC [Vibrio cholerae CT 5369-93]
 gi|297580845|ref|ZP_06942770.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC385]
 gi|124115829|gb|EAY34649.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 1587]
 gi|148875178|gb|EDL73313.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 623-39]
 gi|149741034|gb|EDM55103.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-2]
 gi|150423441|gb|EDN15385.1| flagellar basal-body rod protein FlgC [Vibrio cholerae AM-19226]
 gi|183012974|gb|EDT88274.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-3]
 gi|229332570|gb|EEN98056.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 12129(1)]
 gi|229337775|gb|EEO02792.1| flagellar basal-body rod protein FlgC [Vibrio cholerae bv. albensis
           VL426]
 gi|229341073|gb|EEO06078.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TM 11079-80]
 gi|229349024|gb|EEO13981.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TMA 21]
 gi|258582448|gb|EEW07289.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM603]
 gi|258586435|gb|EEW11150.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM573]
 gi|260839279|gb|EEX65905.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC341]
 gi|261891899|gb|EEY37885.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
 gi|262032430|gb|EEY50992.1| flagellar basal-body rod protein FlgC [Vibrio cholerae CT 5369-93]
 gi|297534671|gb|EFH73507.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC385]
 gi|327484718|gb|AEA79125.1| Flagellar basal-body rod protein FlgC [Vibrio cholerae LMA3894-4]
          Length = 138

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 8/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-----EEVMHGS 58
           L +  ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F     +   +  
Sbjct: 3   LFSVFNVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKARFNRD 61

Query: 59  GGVRVKKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             V VK +G+ +S    V EF+P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  PNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDL 131
               S  M+  TL +
Sbjct: 122 VADASKQMLLRTLQM 136


>gi|225619783|ref|YP_002721040.1| flagellar basal body rod protein FlgC [Brachyspira hyodysenteriae
           WA1]
 gi|225214602|gb|ACN83336.1| flagellar basal body rod protein FlgC [Brachyspira hyodysenteriae
           WA1]
          Length = 153

 Score = 66.6 bits (161), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 71/148 (47%), Gaps = 26/148 (17%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--------- 59
           + + SGL  Q  R+ +I++NIAN  TT  T G   +RR  + F+    G+          
Sbjct: 8   NTSGSGLTAQRTRLDVIADNIANVNTTRTTEGG-AFRRSRVIFKPRDDGNKYRSPFLPDA 66

Query: 60  -------GVRVKKIGVDQST---FVEEFDPGHPVA----NASGIVKYPNVNVLVETADMR 105
                  GVRV  I  D  T   FV  +DP HP A      +G V+ PNVN + E  DM 
Sbjct: 67  LQPNVGTGVRVFSIEKDMETATRFV--YDPSHPDAIKYGEKAGYVEMPNVNPVTEMVDMM 124

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           E +R Y AN   I+ +  M  + L+++R
Sbjct: 125 EASRAYEANSTMIQSAKTMFGSALNIIR 152


>gi|127512277|ref|YP_001093474.1| flagellar basal body rod protein FlgC [Shewanella loihica PV-4]
 gi|126637572|gb|ABO23215.1| flagellar basal-body rod protein FlgC [Shewanella loihica PV-4]
          Length = 139

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGV 61
           ++A SG++ QS R+   + NIANA +   +     YR +   FE  +       + S  V
Sbjct: 8   NVAGSGMSAQSVRLNTTASNIANADSVSSSVDKT-YRARHPVFEAELAKASHQQNTSQAV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V  I        +E+ P HP+A+A G +  PNVNV+ E A+M   +R Y  N+Q    +
Sbjct: 67  KVAGIVESDKPLQKEYSPDHPLADADGFIYKPNVNVMEEMANMISASRSYQMNVQVADAA 126

Query: 122 HDMMTTTL 129
             M+  TL
Sbjct: 127 KSMLQQTL 134


>gi|32474824|ref|NP_867818.1| flagellar basal-body rod potein FlgC [Rhodopirellula baltica SH 1]
 gi|32445364|emb|CAD75365.1| flagellar basal-body rod potein FlgC [Rhodopirellula baltica SH 1]
 gi|327539962|gb|EGF26561.1| flagellar basal-body rod protein FlgC [Rhodopirellula baltica WH47]
          Length = 143

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 9/138 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVMHGS---- 58
           +I++  I+ S L  Q  R+  IS NIAN  +  D  G+  PY+ + + F+     S    
Sbjct: 5   MISALDISTSALVAQRTRLNAISGNIANISSLVDENGNPSPYQARQVVFQTDETASPGEA 64

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETADMRETNRLYMAN 114
            GV+V ++ +D+S  +  + P HP+A       G V YPN+++  +  D  E+ R Y AN
Sbjct: 65  AGVKVSEVMLDESEPLYRYQPDHPLAINEGKWEGYVAYPNIDLTTQMVDALESTRAYEAN 124

Query: 115 LQTIKQSHDMMTTTLDLL 132
           +  I+ S  M    L +L
Sbjct: 125 VGVIEISKGMSRQRLAIL 142


>gi|257457889|ref|ZP_05623048.1| flagellar basal-body rod protein FlgC [Treponema vincentii ATCC
           35580]
 gi|257444602|gb|EEV19686.1| flagellar basal-body rod protein FlgC [Treponema vincentii ATCC
           35580]
          Length = 151

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 19/149 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----------- 52
           + +S +IA +G++ +  R  +IS+NIANA TT    G    R + I  +           
Sbjct: 3   IFSSINIAATGMSAERLRTDVISDNIANASTTSSQEGGYFRRSRVILAQKNDGIDWRLPF 62

Query: 53  ---EVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETADM 104
              ++  G G GVRV  I  D S     ++P HP A  SG     V+YPNVN++ E  D+
Sbjct: 63  VPSDMDRGVGTGVRVTGIEKDNSEPRLSYEPDHPHAIVSGPKAGYVEYPNVNIVTEMVDL 122

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +R Y AN   ++ S +M    L++ R
Sbjct: 123 ISASRSYEANAAVVQGSKEMFQRALEIGR 151


>gi|309779445|ref|ZP_07674206.1| flagellar basal-body rod protein FlgC [Ralstonia sp. 5_7_47FAA]
 gi|308921686|gb|EFP67322.1| flagellar basal-body rod protein FlgC [Ralstonia sp. 5_7_47FAA]
          Length = 135

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 7/127 (5%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVMHG---SGGVRVKK 65
           +A S L  QS RM +++ N+ANA + TG  P    YR K + F         + GV V +
Sbjct: 9   VAGSALTAQSKRMNVVASNLANAESVTG--PDGKAYRAKQVVFSPAQESDDYATGVSVDR 66

Query: 66  IGVDQSTFVEEF-DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  D  T ++    PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++    +  M
Sbjct: 67  VVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTM 126

Query: 125 MTTTLDL 131
            +  L L
Sbjct: 127 ASKALTL 133


>gi|269961597|ref|ZP_06175959.1| Flagellar basal-body rod protein flgC [Vibrio harveyi 1DA3]
 gi|269833638|gb|EEZ87735.1| Flagellar basal-body rod protein flgC [Vibrio harveyi 1DA3]
          Length = 124

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 7/123 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSGGVRVKKIGVDQ 70
           ++ +S R+   S N+ANA +   +   D Y+ +   F       M G   V VK +G+ +
Sbjct: 1   MSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMRGGDTVPVKVMGIVE 59

Query: 71  S--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S  M+  T
Sbjct: 60  SDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRT 119

Query: 129 LDL 131
           L +
Sbjct: 120 LQM 122


>gi|299068730|emb|CBJ39969.1| FlgC: Flagellar basal-body rod protein [Ralstonia solanacearum
           CMR15]
          Length = 129

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 7/127 (5%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVMHGSG---GVRVKK 65
           +A S L  QS RM +++ N+ANA + TG  P    YR K + F       G   GV V +
Sbjct: 3   VAGSALTAQSKRMNVVASNLANAESVTG--PDGTAYRAKQVVFSPEQETDGYATGVSVDR 60

Query: 66  IGVDQSTFVEEF-DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  D  T ++    PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++    +  M
Sbjct: 61  VVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTM 120

Query: 125 MTTTLDL 131
               L L
Sbjct: 121 AAKALTL 127


>gi|17548564|ref|NP_521904.1| flagellar basal-body rod protein FlgC [Ralstonia solanacearum
           GMI1000]
 gi|300693335|ref|YP_003749308.1| flagellar basal-body rod protein flgc (proximal rod protein)
           [Ralstonia solanacearum PSI07]
 gi|17430812|emb|CAD17494.1| probable flagellar basal-body rod protein flgc [Ralstonia
           solanacearum GMI1000]
 gi|299075372|emb|CBJ34667.1| Flagellar basal-body rod protein flgC (proximal rod protein)
           [Ralstonia solanacearum PSI07]
          Length = 135

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 7/127 (5%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVMHGSG---GVRVKK 65
           +A S L  QS RM +++ N+ANA + TG  P    YR K + F       G   GV V +
Sbjct: 9   VAGSALTAQSKRMNVVASNLANAESVTG--PDGTAYRAKQVVFSPEQETDGYATGVSVDR 66

Query: 66  IGVDQSTFVEEF-DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  D  T ++    PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++    +  M
Sbjct: 67  VVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTM 126

Query: 125 MTTTLDL 131
               L L
Sbjct: 127 AAKALTL 133


>gi|27363707|ref|NP_759235.1| flagellar basal body rod protein FlgC [Vibrio vulnificus CMCP6]
 gi|37679145|ref|NP_933754.1| flagellar basal body rod protein FlgC [Vibrio vulnificus YJ016]
 gi|320157111|ref|YP_004189490.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus MO6-24/O]
 gi|27359823|gb|AAO08762.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus CMCP6]
 gi|37197887|dbj|BAC93725.1| flagellar basal body rod protein FlgC [Vibrio vulnificus YJ016]
 gi|319932423|gb|ADV87287.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus MO6-24/O]
          Length = 138

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSGG-VRV 63
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F       M+  G  V V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMYNRGDTVPV 66

Query: 64  KKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           K +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  KVLGIVESDKPLSAEYNPEHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KQMLLRTLQM 136


>gi|90579907|ref|ZP_01235715.1| flagellar basal body rod protein [Vibrio angustum S14]
 gi|90438792|gb|EAS63975.1| flagellar basal body rod protein [Vibrio angustum S14]
          Length = 138

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-----HGSGGVRV 63
           ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F   +     H S  V V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANANSVSSS-AEETYKARHPIFAAALNSASYHQSSSVPV 66

Query: 64  KKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +  G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  QVKGIVESDKPLSAEYNPEHPMANVEGFIYKPNVNVMEEMANMISASRSYQNNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KQMLMKTLQM 136


>gi|320107020|ref|YP_004182610.1| flagellar basal-body rod protein FlgC [Terriglobus saanensis
           SP1PR4]
 gi|319925541|gb|ADV82616.1| flagellar basal-body rod protein FlgC [Terriglobus saanensis
           SP1PR4]
          Length = 152

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 22/145 (15%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----------- 58
           I+ S L  Q  R ++++ N+ANA TT    G   Y RK +       G+           
Sbjct: 9   ISASALHAQRVRAEVVATNMANAETTRTADGG-AYSRKHVLLASAESGNTFSSSFRHAGS 67

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GGV V  +  D +  +  +DP HP A+  G V+YP++N L E  D+    
Sbjct: 68  LLSTPSQTVEGGVDVTSVEGDGAPPIRRYDPSHPDADKDGFVEYPDINPLTEMVDLMGAT 127

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y  N   ++    M+  +LD+L+
Sbjct: 128 RSYGLNATALQAEKGMVVASLDILK 152


>gi|238782790|ref|ZP_04626819.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
 gi|238716213|gb|EEQ08196.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
          Length = 121

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 4/120 (3%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKKIGVDQS 71
           +A QS R+ + + N+ANA  +   P   PYR + + F+     G   GGVRV  +     
Sbjct: 1   MAAQSKRLNVSASNMANA-DSAVGPDGQPYRARQVVFQVNSAPGQEIGGVRVSDVMESSD 59

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  +  MM  TL L
Sbjct: 60  PDRMVYEPGNPLADDKGYVRMPNVNVVSEMVNTISASRSYQANVEVLNTAKSMMLKTLTL 119


>gi|87119678|ref|ZP_01075575.1| Flagellar basal-body rod protein FlgC [Marinomonas sp. MED121]
 gi|86165154|gb|EAQ66422.1| Flagellar basal-body rod protein FlgC [Marinomonas sp. MED121]
          Length = 149

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 16/138 (11%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---SFEEVMHGSG------- 59
           I+ S ++ Q+ R+  ++ NIANA +   +       RK +     +E M G G       
Sbjct: 9   ISGSAMSAQTIRLNTVASNIANADSVASSEDQTYRARKPVFSTMMQESMRGYGWNDVSND 68

Query: 60  ------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                 GV VK I    +     ++P HP+AN SG V Y NVN + E ADM   +R +  
Sbjct: 69  EFGAGVGVEVKGIVESDAPLQPRYEPDHPMANESGYVYYSNVNPVEEMADMMSASRSFQT 128

Query: 114 NLQTIKQSHDMMTTTLDL 131
           N++ +  +  MM   L L
Sbjct: 129 NVEVMNSAKSMMQKMLTL 146


>gi|2105146|gb|AAB57897.1| FlgC [Treponema denticola]
          Length = 151

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-------------- 49
           L  S +IA +G+ V+  R  +IS NIANA +  +T    P++R  +              
Sbjct: 3   LFTSINIAATGMGVERLRTDVISNNIANASSL-ETQEGGPFKRSRVIVGQKKSGIDWQTP 61

Query: 50  -SFEEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
            + + V  G G GV+V  I  D S  V      HP A       G V+YPNVN++ E  D
Sbjct: 62  FTPQNVERGVGEGVKVLSIEKDTSDTVGFMIRTHPKALKYGPKEGYVEYPNVNIVTEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y ANL  +  + DM    LD+ R
Sbjct: 122 LISASRAYEANLAVVNGAKDMFQRALDIAR 151


>gi|119899029|ref|YP_934242.1| flagellar basal-body rod protein FlgC [Azoarcus sp. BH72]
 gi|119671442|emb|CAL95355.1| flagellar basal-body rod protein FlgC [Azoarcus sp. BH72]
          Length = 146

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 16/138 (11%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GGVRVK 64
            IA S L  QS R+   + N+ANA +     G  PYR K + F     G+    GGVR K
Sbjct: 8   QIAGSALNAQSLRLNTTASNLANADSVIAEDG-QPYRAKQVVFAAKPVGATPPVGGVRDK 66

Query: 65  ----KIGVDQSTFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                +GV  +  VE        ++P +P ANA G V+ PNVNV+ E  +M   +R Y  
Sbjct: 67  GAAASVGVQVTQVVESAAPMRLVYEPHNPAANAEGYVEMPNVNVVEEMVNMISASRSYQN 126

Query: 114 NLQTIKQSHDMMTTTLDL 131
           N + +  +  ++  TL +
Sbjct: 127 NAEVMNTAQTLLQRTLQI 144


>gi|160896081|ref|YP_001561663.1| flagellar basal-body rod protein FlgC [Delftia acidovorans SPH-1]
 gi|160361665|gb|ABX33278.1| flagellar basal-body rod protein FlgC [Delftia acidovorans SPH-1]
          Length = 134

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGVRVKKI 66
           I+ S ++ QS R+ +++ N+AN       P    Y+ + + F+ V     GS GVRV  I
Sbjct: 9   ISGSAVSAQSQRLNVVASNLANVDAVAG-PDGKAYQARQVVFQTVAMGEEGSSGVRVSAI 67

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D +      DP HP+A+A G V + NV+ + E  +M   +R Y  N++ +  +  ++ 
Sbjct: 68  SQDNTPGRRIHDPQHPLADAEGYVTHSNVSAVDEMVNMISASRSYQNNVEVMNTTKSLLL 127

Query: 127 TTLDL 131
            TL +
Sbjct: 128 KTLQM 132


>gi|315127355|ref|YP_004069358.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
 gi|315015869|gb|ADT69207.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
          Length = 143

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 10/132 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--------GV 61
           IA SG++ Q+ R+   + NI+NA T   +       R+ +   E+   S          V
Sbjct: 9   IAGSGMSAQNVRLNTTASNISNANTISSSQNETYRARQPVFAAELTKASASASNPQGSAV 68

Query: 62  RVKKIGVDQST--FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            VK +GV +S      E++P HP A+ +G +  PNVNV+ E A+M   +R Y  N+Q   
Sbjct: 69  GVKVLGVVESNKPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMISASRSYQTNVQVAD 128

Query: 120 QSHDMMTTTLDL 131
            +  M++ TL L
Sbjct: 129 AAKQMLSKTLLL 140


>gi|325274802|ref|ZP_08140830.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51]
 gi|324100070|gb|EGB97888.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51]
          Length = 87

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 43/81 (53%)

Query: 51  FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
           FE+      GV+VK I  DQS     ++P HP AN  G V YPNVNV+ E ADM   +R 
Sbjct: 5   FEDQGEAGQGVQVKGIVEDQSNLEARYEPNHPAANKDGYVYYPNVNVVEEMADMISASRA 64

Query: 111 YMANLQTIKQSHDMMTTTLDL 131
           +  N + +  +  MM   L L
Sbjct: 65  FQTNAELMNTAKSMMQKVLTL 85


>gi|258511369|ref|YP_003184803.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478095|gb|ACV58414.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 144

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 65/139 (46%), Gaps = 16/139 (11%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------------ 54
           S +I+ SGLA     + +I+ NIAN  TT  TP   PYR + ++F  V            
Sbjct: 6   SMNISASGLAANQLWLNVIANNIANVNTT-RTPQGGPYRAEIVNFAPVENDVSFQTALGQ 64

Query: 55  -MHG-SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
            + G  GGV V  I  D S F   +DP +P A  +G V+  NVN+  +  D+ +  R Y 
Sbjct: 65  AVQGIGGGVEVTSITQDTSPFQLIYDPSNPDA-VNGYVETSNVNLTTQMVDLIQATRAYQ 123

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN      +  M  T L +
Sbjct: 124 ANATAFDAAKQMAVTALGI 142


>gi|288573035|ref|ZP_06391392.1| flagellar basal-body rod protein FlgC [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288568776|gb|EFC90333.1| flagellar basal-body rod protein FlgC [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 140

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 9/138 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  S  +A S L      M  IS+N+AN  ++  TP   PY R+   F++++   G    
Sbjct: 3   VFKSIDVAASSLTAHRLWMDTISQNLANVNSSR-TPEGGPYVRRVPVFQQILDEIGEDGK 61

Query: 60  ---GVRVKKIGVDQSTFVE-EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
              GV+V +I  D +T     + P HP A+  G V  PNV+V+ E ADM   +R Y ANL
Sbjct: 62  VKGGVKVVEIAKDTTTAPRLVYQPDHPDADQEGYVAMPNVSVVREMADMMVASRAYEANL 121

Query: 116 QTIKQSHDMMTTTLDLLR 133
                +  M T  LD+L+
Sbjct: 122 AVTTSAKSMWTGALDILK 139


>gi|332533177|ref|ZP_08409046.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037459|gb|EGI73913.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 143

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 10/132 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK---I 66
           IA SG++ Q+ R+   + NI+NA T   +       R+ +   E+   S  V  ++   +
Sbjct: 9   IAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRARQPVFAAELTKASASVSNQQGSAV 68

Query: 67  GVDQSTFVE-------EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV     VE       E++P HP A+ +G +  PNVNV+ E A+M   +R Y  N+Q   
Sbjct: 69  GVKVLGIVESDAPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMISASRSYQTNVQVAD 128

Query: 120 QSHDMMTTTLDL 131
            +  M++ TL L
Sbjct: 129 AAKQMLSKTLLL 140


>gi|269836584|ref|YP_003318812.1| flagellar basal-body rod protein FlgC [Sphaerobacter thermophilus
           DSM 20745]
 gi|269785847|gb|ACZ37990.1| flagellar basal-body rod protein FlgC [Sphaerobacter thermophilus
           DSM 20745]
          Length = 154

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 23/147 (15%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------------- 54
            ++ SGL  Q  RM +I+ NIAN  TT  TP   PYRR+ + F  V              
Sbjct: 8   RVSMSGLTAQRLRMDVIASNIANVDTT-RTPEGGPYRRRQVVFTAVPATDSRPSAGGFQR 66

Query: 55  --------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                    +   GV V  I  D       ++P HP A+  G V  P+++V+ E  D+  
Sbjct: 67  VLAPVDPQSNAGQGVAVTAIRTDPDAVRRVYEPDHPDADEEGFVLRPDIDVITEMTDLLA 126

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+  +     M +  L + R
Sbjct: 127 ASRAYEANVTVLNAVKAMASRALTIGR 153


>gi|331006032|ref|ZP_08329374.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
 gi|330420161|gb|EGG94485.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
          Length = 140

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 10/131 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---------RKTISFEEVMHGSGG 60
           IA SG+  QS R+   + N+ANA     +   + YR         + T+S +   + S G
Sbjct: 9   IAGSGMNAQSLRLNTTASNLANADAAASSI-DETYRGRHPVFASLKDTLSMDSNGNASVG 67

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V  I    +     ++PGHP++N  G V YPNVNV+ E  +M   +R +  N++ +  
Sbjct: 68  VGVLGIVESDAPLQPRYEPGHPLSNEEGYVFYPNVNVVEEMTNMISASRSFQINVEVMNS 127

Query: 121 SHDMMTTTLDL 131
           +  MM   L L
Sbjct: 128 AKQMMQRALTL 138


>gi|226313072|ref|YP_002772966.1| flagellar basal-body rod protein FlgC [Brevibacillus brevis NBRC
           100599]
 gi|226096020|dbj|BAH44462.1| flagellar basal-body rod protein FlgC [Brevibacillus brevis NBRC
           100599]
          Length = 152

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 64/149 (42%), Gaps = 21/149 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTI--------SFE 52
           L    + + S L     R+  IS NIANA  T          PYRRK +        +F+
Sbjct: 3   LFQGINTSASALTANRLRLDTISSNIANAEVTRANFVDGAWQPYRRKMVELSPQTNGTFD 62

Query: 53  EVMH----------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +           G  GV+V  I  D + F   +DP HP A+  G +  PNV+ + E  
Sbjct: 63  NFLQAAVGTVSGSQGGQGVKVTAIQEDNTPFKRVYDPSHPDADQDGYLLMPNVDPMKEMV 122

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           DM   +R Y AN+  +  S  MM   L++
Sbjct: 123 DMISASRSYEANVTALNASKAMMLKALEI 151


>gi|86146157|ref|ZP_01064483.1| flagellar basal body rod protein [Vibrio sp. MED222]
 gi|218708802|ref|YP_002416423.1| flagellar basal body rod protein FlgC [Vibrio splendidus LGP32]
 gi|85836104|gb|EAQ54236.1| flagellar basal body rod protein [Vibrio sp. MED222]
 gi|218321821|emb|CAV17789.1| Polar flagellar FlgC [Vibrio splendidus LGP32]
          Length = 137

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 7/129 (5%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSGGVRVK 64
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F     +  +    V VK
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELNQARNSGHTVPVK 66

Query: 65  KIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S 
Sbjct: 67  VLGIVESDKPLNAEYNPDHPLANNEGYIYKPNVNVMEEMANMISASRAYQTNVQVADSSK 126

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 127 QMLLRTLQM 135


>gi|254516987|ref|ZP_05129045.1| flagellar basal-body rod protein FlgC [gamma proteobacterium
           NOR5-3]
 gi|219674492|gb|EED30860.1| flagellar basal-body rod protein FlgC [gamma proteobacterium
           NOR5-3]
          Length = 140

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 10/133 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---------GSGG 60
           +A + L  QS R+  IS N+ANA     +   + YR +   FE +++         G  G
Sbjct: 9   VAATSLDAQSQRLNTISSNLANANAVSSS-AEETYRAQYPVFETMLNDLTTGNGADGVAG 67

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  I   +   V E+ P HP+A+  G +  P +N + E A+M E +R Y  +++ +  
Sbjct: 68  VRVTGIAQSELPAVREYVPTHPLADDEGFIYRPAINSVEEMANMMEASRSYQDSIEAMNT 127

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL L R
Sbjct: 128 AKQLILRTLTLGR 140


>gi|312882661|ref|ZP_07742398.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369622|gb|EFP97137.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 138

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSGG----VRV 63
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F  E+     G    V V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKAKYGRDHTVPV 66

Query: 64  KKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           K +G+   Q     E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  KVLGIVESQKPLNAEYNPDHPLANNEGYIYKPNVNVMEEMANMISASRSYQTNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KQMLLRTLQM 136


>gi|213026534|ref|ZP_03340981.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 108

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 6/108 (5%)

Query: 28  NIANART-TGDTPGSDPYRRKTISFE---EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
           N+ANA + TG  P   PYR K + F+        +GGV+V  +   Q+     ++PG+P+
Sbjct: 1   NLANADSVTG--PDGQPYRAKQVVFQVDAAPGQATGGVKVASVIESQAPEKLVYEPGNPL 58

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A+A+G VK PNV+V+ E  +    +R Y AN++ +     MM  TL L
Sbjct: 59  ADANGYVKMPNVDVVGEMVNTMSASRSYQANIEVLNTVKSMMLKTLTL 106


>gi|152997584|ref|YP_001342419.1| flagellar basal-body rod protein FlgC [Marinomonas sp. MWYL1]
 gi|150838508|gb|ABR72484.1| flagellar basal-body rod protein FlgC [Marinomonas sp. MWYL1]
          Length = 151

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 18/139 (12%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------------- 56
           I+ S ++ Q+ R+  I+ N+AN  +   +     YR +   F ++M+             
Sbjct: 11  ISGSAMSAQTIRLNTIASNMANVDSAASS-ADQTYRARKPVFSQMMNDSMREYGWNNANK 69

Query: 57  ---GSG-GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
              G+G GV+V  I    +     ++P HP+AN  G V YPNVN + E ADM   +R + 
Sbjct: 70  DDTGAGVGVKVDGIVESDAPLQPRYEPDHPMANEDGYVFYPNVNPMEEMADMMSASRSFQ 129

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N++ +  +  MM   L L
Sbjct: 130 TNVEIMNSAKSMMQKMLTL 148


>gi|77359720|ref|YP_339295.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874631|emb|CAI85852.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 143

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 10/132 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--------GV 61
           IA SG++ Q+ R+   + NI+NA T   +       R+ +   E+   S          V
Sbjct: 9   IAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRARQPVFAAELTKASASASNPQGSAV 68

Query: 62  RVKKIGVDQST--FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            VK +G+ +S      E++P HP A+ +G +  PNVNV+ E A+M   +R Y  N+Q   
Sbjct: 69  GVKVLGIVESNKPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMISASRSYQTNVQVAD 128

Query: 120 QSHDMMTTTLDL 131
            +  M++ TL L
Sbjct: 129 AAKQMLSKTLLL 140


>gi|207728344|ref|YP_002256738.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           MolK2]
 gi|207739739|ref|YP_002258132.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           IPO1609]
 gi|206591590|emb|CAQ57202.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           MolK2]
 gi|206593121|emb|CAQ60027.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           IPO1609]
          Length = 168

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 7/127 (5%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVMHGSG---GVRVKK 65
           +A S L  QS RM +++ N+ANA + TG  P    YR K + F       G   GV V  
Sbjct: 42  VAGSALTAQSKRMNVVASNLANAESVTG--PDGTAYRAKQVVFSPEQGTDGYATGVSVDG 99

Query: 66  IGVDQSTFVEEF-DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  D  T ++    PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++    +  M
Sbjct: 100 VVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTM 159

Query: 125 MTTTLDL 131
               L L
Sbjct: 160 AAKALTL 166


>gi|124268256|ref|YP_001022260.1| flagellar basal body rod protein [Methylibium petroleiphilum PM1]
 gi|124261031|gb|ABM96025.1| flagellar basal body rod protein [Methylibium petroleiphilum PM1]
          Length = 138

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MHGSGGV 61
           +++ S ++ QS R+ +++ N+ANA T    P    Y+ + + F+ +          + GV
Sbjct: 8   NVSGSAVSAQSQRLNVVASNLANADTVAG-PDGKAYKARQVVFQTLPFQQPGEAGTAAGV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V ++  D +   +  DP HP A+A G V Y NVN + E  +M   +R Y  N++ +  +
Sbjct: 67  QVSQVTEDNAPGRKVLDPKHPQADADGYVTYSNVNAVEEMVNMISASRSYQNNIEVMNTA 126

Query: 122 HDMMTTTLDL 131
             ++  TL +
Sbjct: 127 KTLLLKTLQM 136


>gi|218288292|ref|ZP_03492591.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241651|gb|EED08824.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 144

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 16/139 (11%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------------ 54
           S  I+ SGLA     + +I+ NIAN  TT  TP   PYR + ++F  V            
Sbjct: 6   SMDISASGLAANQLWLNVIANNIANVNTT-RTPQGGPYRAEIVNFAPVENDVSFQTALGQ 64

Query: 55  -MHG-SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
            + G  GGV V  I  D S F   +DP +P A  +G V+  NVN+  +  D+ +  R Y 
Sbjct: 65  AVQGIGGGVEVTSITQDTSPFQLIYDPSNPDA-VNGYVESSNVNLTTQMVDLIQATRAYQ 123

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN      +  M  T L +
Sbjct: 124 ANATAFDAAKQMAVTALGI 142


>gi|332305613|ref|YP_004433464.1| flagellar basal-body rod protein FlgC [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172942|gb|AEE22196.1| flagellar basal-body rod protein FlgC [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 140

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 6/128 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GGVRVKK 65
           IA++G++ QS R+   + N+ANA +   +       R  +   E+   S     G  V+ 
Sbjct: 9   IASTGMSAQSVRLNTTASNVANANSVSSSYDQTYKARHPVFAAELQRASQDQNAGTGVQV 68

Query: 66  IGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +GV   Q+    E+ PGHP+A+ +G +  PNVN++ E ADM   ++ Y  N+Q    +  
Sbjct: 69  LGVVESQAPLQIEYSPGHPMADENGYIYKPNVNIVEEMADMMSASKAYETNVQVADTTKR 128

Query: 124 MMTTTLDL 131
           +    L L
Sbjct: 129 LFRNVLRL 136


>gi|83747656|ref|ZP_00944692.1| FlgC [Ralstonia solanacearum UW551]
 gi|300696911|ref|YP_003747572.1| FlgC: flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
 gi|83725708|gb|EAP72850.1| FlgC [Ralstonia solanacearum UW551]
 gi|299073635|emb|CBJ53155.1| FlgC: Flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
          Length = 135

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 7/127 (5%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVMHGSG---GVRVKK 65
           +A S L  QS RM +++ N+ANA + TG  P    YR K + F       G   GV V  
Sbjct: 9   VAGSALTAQSKRMNVVASNLANAESVTG--PDGTAYRAKQVVFSPEQGTDGYATGVSVDG 66

Query: 66  IGVDQSTFVEEF-DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  D  T ++    PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++    +  M
Sbjct: 67  VVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTM 126

Query: 125 MTTTLDL 131
               L L
Sbjct: 127 AAKALTL 133


>gi|119469948|ref|ZP_01612753.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
 gi|119446658|gb|EAW27931.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
          Length = 143

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 12/133 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------EEVMHGSGG- 60
           IA SG++ Q+ R+   + NI+NA T   +     YR +   F        E V +  G  
Sbjct: 9   IAGSGMSAQNVRLNTTASNISNANTISSSQ-DKTYRARQPVFAAELTKASESVSNNQGSS 67

Query: 61  VRVKKIGVDQST--FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           V VK +G+ +S+     E++P HP A+ +G +  PNVNV+ E A+M   +R Y  N+Q  
Sbjct: 68  VGVKVLGIVESSAPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMISASRSYETNVQVA 127

Query: 119 KQSHDMMTTTLDL 131
             +  M++ TL L
Sbjct: 128 DAAKQMLSKTLLL 140


>gi|302392398|ref|YP_003828218.1| flagellar basal-body rod protein FlgC [Acetohalobium arabaticum DSM
           5501]
 gi|302204475|gb|ADL13153.1| flagellar basal-body rod protein FlgC [Acetohalobium arabaticum DSM
           5501]
          Length = 145

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 15/142 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----------- 52
           L +  ++++SG+  Q  RM +IS NIAN  TT    G  PY++K+  F+           
Sbjct: 3   LFSGMNVSSSGMTAQRLRMDLISNNIANINTTRTDDGG-PYKKKSPVFKAKNDQGFSLPN 61

Query: 53  ---EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
              +      GV V  I          ++P HP AN  G V+ PN+++  E  DM   +R
Sbjct: 62  SDAQSNQVGQGVEVSSIKESSKPPKLVYNPQHPDANEEGYVEMPNIDIASEMVDMVSASR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            Y AN+  +  S  M  + L +
Sbjct: 122 AYEANVTALNTSKQMAKSALKI 143


>gi|260772272|ref|ZP_05881188.1| flagellar basal-body rod protein FlgC [Vibrio metschnikovii CIP
           69.14]
 gi|260611411|gb|EEX36614.1| flagellar basal-body rod protein FlgC [Vibrio metschnikovii CIP
           69.14]
          Length = 138

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-----EEVMHGSGGVRV 63
           ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F     +   H    V V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSVSSS-AKETYKARHAVFGAELNKARYHRDPNVPV 66

Query: 64  KKIGVDQST--FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           K +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  KVLGIVESNKPLNAEYNPDHPLANDEGFIYKPNVNVMEEMANMISASRSYQTNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KQMLLRTLQM 136


>gi|170694390|ref|ZP_02885544.1| flagellar basal-body rod protein FlgC [Burkholderia graminis C4D1M]
 gi|170140813|gb|EDT08987.1| flagellar basal-body rod protein FlgC [Burkholderia graminis C4D1M]
          Length = 127

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 16/129 (12%)

Query: 15  LAVQSARMQIISENIANA-RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV----- 68
           ++ QS R+ + + N+ANA  TTG  P   PY+ K + F   +   GG R           
Sbjct: 1   MSAQSQRLNVTASNLANADSTTG--PDGQPYKAKQVVFG--VAPIGGARTGSGQQVGGVQ 56

Query: 69  ------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
                 D +     +DPG+P ANA G V  PNV+ + E  +M   +R Y AN++T+  + 
Sbjct: 57  VTGVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAK 116

Query: 123 DMMTTTLDL 131
            +M  TL +
Sbjct: 117 TLMLKTLTI 125


>gi|56964036|ref|YP_175767.1| flagellar basal body rod protein FlgC [Bacillus clausii KSM-K16]
 gi|56910279|dbj|BAD64806.1| flagellar basal-body rod protein FlgC [Bacillus clausii KSM-K16]
          Length = 148

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 22/149 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT------GDTPGSDPYRRKTI-------- 49
           + +S +++ SGL +Q  RM + + NIANA TT      G+     PY+R+ +        
Sbjct: 3   MFSSMNVSGSGLTLQRLRMDVAASNIANADTTRAERVNGEW---QPYQRRMVVQGPTSMG 59

Query: 50  SFEEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
            F   +  +      GV  K+I  D +     +DP HP AN  G V  PNV +  E  D+
Sbjct: 60  RFSSDLQKATAELDQGVVAKQIVRDPTPATLVYDPAHPDANEDGYVSKPNVEIAREMVDI 119

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  ++ S  M+   L++ R
Sbjct: 120 TSATRSYEANVTALQASKGMVMKALEIGR 148


>gi|260767771|ref|ZP_05876706.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|260617280|gb|EEX42464.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|315179397|gb|ADT86311.1| flagellar basal-body rod protein FlgC [Vibrio furnissii NCTC 11218]
          Length = 138

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-----GGVRV 63
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +       V V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSKARYNRDPNVPV 66

Query: 64  KKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           K +G+ +S      EF+P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  KVLGIVESDKPLNAEFNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KQMLLRTLQM 136


>gi|254508426|ref|ZP_05120546.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus 16]
 gi|219548636|gb|EED25641.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus 16]
          Length = 138

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSGG----VRV 63
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F  E+     G    V V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSKAKYGNDHTVPV 66

Query: 64  KKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           K +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  KVMGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KQMLLRTLQM 136


>gi|261253616|ref|ZP_05946189.1| flagellar basal-body rod protein FlgC [Vibrio orientalis CIP
           102891]
 gi|260937007|gb|EEX92996.1| flagellar basal-body rod protein FlgC [Vibrio orientalis CIP
           102891]
          Length = 138

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSGG----VRV 63
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F  E+     G    V V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKAKYGRDHTVPV 66

Query: 64  KKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           K +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  KLMGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KQMLLRTLQM 136


>gi|197122865|ref|YP_002134816.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter sp. K]
 gi|196172714|gb|ACG73687.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter sp. K]
          Length = 140

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 11/142 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------ 54
           MD+L ++ +++ SGLA +  R+ + + N+ANA TT   P   PYRR     E V      
Sbjct: 1   MDFL-SALNVSASGLAAERVRVNLAASNLANAETT-RGPDGQPYRRLDPVLEAVPFDAAL 58

Query: 55  ---MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GVRV  I   +      F P HP A+  G V  P+VN + E  ++    + Y
Sbjct: 59  GAAGPAPSGVRVAAIAEGEGPGRRVFSPAHPDADPDGFVTLPDVNPVHEIVNLMSAQKAY 118

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN   +     M    L++ R
Sbjct: 119 EANATAVDTLKTMAQRALEIAR 140


>gi|323498422|ref|ZP_08103418.1| flagellar basal body rod protein FlgC [Vibrio sinaloensis DSM
           21326]
 gi|323316495|gb|EGA69510.1| flagellar basal body rod protein FlgC [Vibrio sinaloensis DSM
           21326]
          Length = 138

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSGG----VRV 63
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F  E+     G    V V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKAKYGNDHTVPV 66

Query: 64  KKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           K +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  KVMGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KQMLLRTLQM 136


>gi|126444366|ref|YP_001061244.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|134280640|ref|ZP_01767350.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|254299688|ref|ZP_04967137.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
 gi|125657216|gb|ABN48704.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei]
 gi|126223857|gb|ABN87362.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|134247662|gb|EBA47746.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|157809503|gb|EDO86673.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
          Length = 138

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 8/131 (6%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-----GVR 62
           A IA S ++ Q+ R+  I+ N+ANA +   T  +  YR +   F  +          G  
Sbjct: 7   AQIAGSAMSAQTVRLNTIASNLANADSASGTEDAT-YRARKPVFASIFQLDAQGEPRGAA 65

Query: 63  VKKIGVDQST--FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+ + V +ST    +   PGHP+A+A G V YPNVN + E  DM   +R Y  N++ + +
Sbjct: 66  VQVLDVVKSTEPLRKVHQPGHPLADAEGNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGR 125

Query: 121 SHDMMTTTLDL 131
            + M    L L
Sbjct: 126 VNGMQLELLKL 136


>gi|319944137|ref|ZP_08018415.1| flagellar basal-body rod protein FlgC [Lautropia mirabilis ATCC
           51599]
 gi|319742631|gb|EFV95040.1| flagellar basal-body rod protein FlgC [Lautropia mirabilis ATCC
           51599]
          Length = 149

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 18/148 (12%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+  ++ N+ANA T     GS  Y+ + + F+  M     
Sbjct: 1   MSSLMNILPLAGSALSAQSQRLNTVASNLANADTVAGPDGSV-YKARQVVFKPAMVEARQ 59

Query: 56  ------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                         S GVRV  +  D +   + +DP +P ANA G V + NVNV+ E  +
Sbjct: 60  AAGARQWSTRGASASMGVRVVDVIEDPTPGKQTYDPKNPAANAEGYVMHSNVNVIEEMVN 119

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDL 131
           M   +R Y  N++ +  +  +   TL +
Sbjct: 120 MISASRSYQNNVEMMNTAQQLALKTLSI 147


>gi|254255085|ref|ZP_04948402.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
 gi|124899730|gb|EAY71573.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
          Length = 133

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 8/128 (6%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           + IA S +A Q+ R+  I+ N+ANA T G T G+  YR +   F  V  G G  RV+ + 
Sbjct: 8   SQIAGSAMAAQTVRLDTIASNLANADTAG-TEGT-AYRARKPVFAAVYEGHGA-RVQVLD 64

Query: 68  VDQ--STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           V +       +++PG P+A+ +G+V Y NV+ + E  DM   +R +  N + + +   M 
Sbjct: 65  VIELDDPPAAKYEPGSPLADENGMVYYSNVSAVEEMTDMMAASRAFSTNAEVLSRVKAMQ 124

Query: 126 TTTLDLLR 133
               DLLR
Sbjct: 125 Q---DLLR 129


>gi|15642198|ref|NP_231830.1| flagellar basal body rod protein FlgC [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121586290|ref|ZP_01676080.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 2740-80]
 gi|121726545|ref|ZP_01679794.1| flagellar basal-body rod protein FlgC [Vibrio cholerae V52]
 gi|147675208|ref|YP_001217716.1| flagellar basal body rod protein FlgC [Vibrio cholerae O395]
 gi|153817070|ref|ZP_01969737.1| flagellar basal-body rod protein FlgC [Vibrio cholerae NCTC 8457]
 gi|153820804|ref|ZP_01973471.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|227082323|ref|YP_002810874.1| flagellar basal-body rod protein FlgC [Vibrio cholerae M66-2]
 gi|229507724|ref|ZP_04397229.1| flagellar basal-body rod protein FlgC [Vibrio cholerae BX 330286]
 gi|229512081|ref|ZP_04401560.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|229519217|ref|ZP_04408660.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC9]
 gi|229607228|ref|YP_002877876.1| flagellar basal body rod protein FlgC [Vibrio cholerae MJ-1236]
 gi|254849328|ref|ZP_05238678.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MO10]
 gi|255747102|ref|ZP_05421047.1| flagellar basal-body rod protein FlgC [Vibrio cholera CIRS 101]
 gi|262161354|ref|ZP_06030464.1| flagellar basal-body rod protein FlgC [Vibrio cholerae INDRE 91/1]
 gi|262167775|ref|ZP_06035477.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC27]
 gi|298500423|ref|ZP_07010228.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MAK 757]
 gi|9656755|gb|AAF95344.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121549556|gb|EAX59582.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 2740-80]
 gi|121630998|gb|EAX63377.1| flagellar basal-body rod protein FlgC [Vibrio cholerae V52]
 gi|126512338|gb|EAZ74932.1| flagellar basal-body rod protein FlgC [Vibrio cholerae NCTC 8457]
 gi|126521596|gb|EAZ78819.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|146317091|gb|ABQ21630.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O395]
 gi|227010211|gb|ACP06423.1| flagellar basal-body rod protein FlgC [Vibrio cholerae M66-2]
 gi|227014095|gb|ACP10305.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O395]
 gi|229343906|gb|EEO08881.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC9]
 gi|229352046|gb|EEO16987.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|229355229|gb|EEO20150.1| flagellar basal-body rod protein FlgC [Vibrio cholerae BX 330286]
 gi|229369883|gb|ACQ60306.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MJ-1236]
 gi|254845033|gb|EET23447.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MO10]
 gi|255735504|gb|EET90904.1| flagellar basal-body rod protein FlgC [Vibrio cholera CIRS 101]
 gi|262023840|gb|EEY42539.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC27]
 gi|262028665|gb|EEY47319.1| flagellar basal-body rod protein FlgC [Vibrio cholerae INDRE 91/1]
 gi|297541116|gb|EFH77170.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MAK 757]
          Length = 138

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 8/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-----EEVMHGS 58
           L +  ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F     +   +  
Sbjct: 3   LFSVFNVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKARFNRD 61

Query: 59  GGVRVKKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             V VK +G+ +S    V EF+P HP+AN  G +   NVNV+ E A+M   +R Y  N+Q
Sbjct: 62  PNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKSNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDL 131
               S  M+  TL +
Sbjct: 122 VADASKQMLLRTLQM 136


>gi|322382305|ref|ZP_08056212.1| flagellar basal body rod protein FlgC-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321153658|gb|EFX46033.1| flagellar basal body rod protein FlgC-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 129

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 17/129 (13%)

Query: 22  MQIISENIANARTT-GDTPGSD--PYRRKTISFE-------------EVMHGSG-GVRVK 64
           M +IS NIANA +T G        PY+RK +  E              + +G+G GVRV 
Sbjct: 1   MDVISSNIANADSTRGKFVDGKWVPYQRKMVVVEPKNQTNFAQNLQNAMKNGTGQGVRVS 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  DQ+ F   ++P HP ++A G V  PNV++  E  DM    R Y AN+  +  +  M
Sbjct: 61  NIVGDQTPFKRVYNPVHPDSDADGYVYMPNVDIQKEMVDMISATRSYEANVTALNATKGM 120

Query: 125 MTTTLDLLR 133
           +T  L++ R
Sbjct: 121 ITKALEIGR 129


>gi|238796902|ref|ZP_04640406.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
 gi|238719162|gb|EEQ10974.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
          Length = 121

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 4/120 (3%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGS--GGVRVKKIGVDQS 71
           +A QS R+ + + N+ANA +    P   PYR + + F+ +   G   GGVRV  +     
Sbjct: 1   MAAQSKRLNVSASNMANADSIAG-PDGQPYRARQVIFQVDSAPGQEIGGVRVGDVVESTE 59

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                ++P +P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  +  MM  TL L
Sbjct: 60  PDRMVYEPANPLADDKGYVRMPNVNVVSEMVNTISASRSYQANVEVMNTAKSMMLKTLTL 119


>gi|224370789|ref|YP_002604953.1| FlgC [Desulfobacterium autotrophicum HRM2]
 gi|223693506|gb|ACN16789.1| FlgC [Desulfobacterium autotrophicum HRM2]
          Length = 165

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 35/162 (21%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVM 55
           L+ S  I+ +GLA    +M +I+EN+AN  TT    G  PYRRK +        +F+ V+
Sbjct: 3   LLDSMKISATGLAAHRTKMNVIAENLANVDTTRTADGG-PYRRKMVVFKDQALENFKSVL 61

Query: 56  HGSG-------------------------GVRVKKIGVDQSTFVEEFDPGHPVAN-ASGI 89
             +                          GV V +I   Q  F   ++P HP A+  +G 
Sbjct: 62  EKNQQTNQVAQVEFSPIEVGKNDPQSRGTGVAVDEIVQSQEDFRLVYNPAHPDADPVTGY 121

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V  PNV+ L E ADM    R Y A++  I  +  M+   L+L
Sbjct: 122 VAMPNVDHLTEVADMIVAKRSYEASITAISNTKSMILKALEL 163


>gi|167567748|ref|ZP_02360664.1| flagellar basal-body rod protein FlgC [Burkholderia oklahomensis
           EO147]
 gi|167574699|ref|ZP_02367573.1| flagellar basal-body rod protein FlgC [Burkholderia oklahomensis
           C6786]
          Length = 138

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 8/131 (6%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-----GVR 62
           A IA S +A Q+ R+  I+ N+ANA     T  S  YR +   F  +          G  
Sbjct: 7   AQIAGSAMAAQTVRLNTIASNLANADAASSTEAST-YRARKPVFASIFKVGADGEVNGAA 65

Query: 63  VKKIGVDQST--FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+ + V QST    +   PG+P+A+A G V YPNV+ + E  DM  + R Y  N++ + +
Sbjct: 66  VQVLDVVQSTEPLRKVHQPGNPLADADGNVLYPNVDPVEEMTDMLSSTRAYSTNVEVLGR 125

Query: 121 SHDMMTTTLDL 131
            + M    L L
Sbjct: 126 VNGMQMELLKL 136


>gi|323495379|ref|ZP_08100456.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
 gi|323310302|gb|EGA63489.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
          Length = 138

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSGG----VRV 63
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F  E+     G    V V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKAKYGRDHTVPV 66

Query: 64  KKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           K +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  KVLGIVESDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQLADAS 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KQMLLRTLQM 136


>gi|84388089|ref|ZP_00990985.1| flagellar basal body rod protein [Vibrio splendidus 12B01]
 gi|84377156|gb|EAP94026.1| flagellar basal body rod protein [Vibrio splendidus 12B01]
          Length = 137

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 7/129 (5%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSGGVRVK 64
           ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F     +  +    V VK
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSVSSS-AEETYKARHAVFGAELNKARNSGHTVPVK 66

Query: 65  KIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S 
Sbjct: 67  VLGIVESDKPLSAEYNPDHPLANNEGYIYKPNVNVMEEMANMISASRAYQTNVQVADSSK 126

Query: 123 DMMTTTLDL 131
            M+  TL +
Sbjct: 127 QMLLRTLQM 135


>gi|326319095|ref|YP_004236767.1| flagellar basal-body rod protein FlgC [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375931|gb|ADX48200.1| flagellar basal-body rod protein FlgC [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 134

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGVRVKKI 66
           ++ S ++ Q+ R+ +++ N+AN       P    Y+ + + F+       G+ GVRV  I
Sbjct: 9   VSGSAISAQAQRLNVVASNLANVDAVAG-PDGQAYKARQVVFQTAPMGDEGAAGVRVSAI 67

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              Q+      DP HP A+A G V + NVN + E  +M   +R Y  N++ +  +  ++ 
Sbjct: 68  SESQAPGKRVLDPTHPQADAEGYVTHSNVNPVEEMVNMISASRSYQNNVEVLNTTKSLLL 127

Query: 127 TTLDL 131
            TL +
Sbjct: 128 KTLQM 132


>gi|120613057|ref|YP_972735.1| flagellar basal-body rod protein FlgC [Acidovorax citrulli AAC00-1]
 gi|120591521|gb|ABM34961.1| flagellar basal-body rod protein FlgC [Acidovorax citrulli AAC00-1]
          Length = 134

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSG--GVRVKKI 66
           ++ S ++ Q+ R+ +++ N+AN       P    Y+ + + F+   M G G  GVRV  I
Sbjct: 9   VSGSAISAQAQRLNVVASNLANVDAVAG-PDGQAYKARQVVFQTAPMGGEGAAGVRVSAI 67

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              Q+      DP HP A+A G V + NVN + E  +M   +R Y  N++ +  +  ++ 
Sbjct: 68  SESQAPGKRVLDPTHPQADAEGYVTHSNVNPVEEMVNMISASRSYQNNVEVLNTTKSLLL 127

Query: 127 TTLDL 131
            TL +
Sbjct: 128 KTLQM 132


>gi|90021857|ref|YP_527684.1| flagellar basal body rod protein FlgC [Saccharophagus degradans
           2-40]
 gi|89951457|gb|ABD81472.1| flagellar basal-body rod protein FlgC [Saccharophagus degradans
           2-40]
          Length = 144

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 14/134 (10%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------------- 57
           A SG+  QS R+   + NIANA T   +  +  YR +   F  V  G             
Sbjct: 10  AGSGMNAQSVRLNTTASNIANAETASSSADT-VYRGRHPVFATVQAGYMQGQVGALDDEQ 68

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GV+V  I    +     ++PGHP A+  G V YPNVN++ E A+M   +R +  N++ 
Sbjct: 69  EMGVQVMGIVESDAPLQRRYEPGHPQADEEGYVHYPNVNIVEEMANMISASRSFQMNVEV 128

Query: 118 IKQSHDMMTTTLDL 131
           +  +  M+   L L
Sbjct: 129 MNSAKQMVQRVLQL 142


>gi|87307389|ref|ZP_01089534.1| flagellar basal-body rod potein FlgC [Blastopirellula marina DSM
           3645]
 gi|87290129|gb|EAQ82018.1| flagellar basal-body rod potein FlgC [Blastopirellula marina DSM
           3645]
          Length = 140

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 10/133 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFE-----EVMHGSGGVRV 63
           I++S +  Q  R+  ++ NIAN  +  D  G   PYR + + F+         G+ GV+V
Sbjct: 7   ISSSAMVAQRIRLNAVTSNIANMSSLRDESGDIAPYRARHVIFQTDNAIRAQGGAAGVKV 66

Query: 64  KKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
             I  +Q   +  + P HP+A       G V +P VN++ +  D  E +R Y AN+  ++
Sbjct: 67  SSIEEEQVEPIYRYQPTHPLAITEGKYKGYVAHPRVNMVEQMVDALEASRAYEANIGVVE 126

Query: 120 QSHDMMTTTLDLL 132
            S ++   +L +L
Sbjct: 127 ISKNLAAQSLRIL 139


>gi|326796599|ref|YP_004314419.1| flagellar basal-body rod protein FlgC [Marinomonas mediterranea
           MMB-1]
 gi|326547363|gb|ADZ92583.1| flagellar basal-body rod protein FlgC [Marinomonas mediterranea
           MMB-1]
          Length = 149

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 18/139 (12%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----------- 58
           I+ S ++ Q+ R+  ++ NIAN  +   +   + YR +   F E+M  S           
Sbjct: 9   ISGSAMSAQTIRLNTVASNIANVDSVASS-VDETYRARKPVFAEMMEESMRERGWRDVSD 67

Query: 59  ----GGVRVKKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                GV V+  G+ +S       ++P HP++N  G V YPNVN + E ADM   +R + 
Sbjct: 68  DDLQSGVGVQVAGIVESDAPLQPRYEPDHPMSNEEGYVFYPNVNPVEEMADMMSASRSFQ 127

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N++ +  +  MM   L L
Sbjct: 128 TNVEVMNSAKSMMQKMLSL 146


>gi|89895737|ref|YP_519224.1| hypothetical protein DSY2991 [Desulfitobacterium hafniense Y51]
 gi|89335185|dbj|BAE84780.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 176

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 43/171 (25%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSD--PYRRKTI--------- 49
           +  S  I+ SGL  Q  R+ +IS NIAN  TT     T G +  PY+R+ +         
Sbjct: 3   IFGSMDISASGLTAQRLRLDVISNNIANINTTRTGQLTEGGNQIPYQRQVVVFKARGTES 62

Query: 50  SFEEVMHGS----------------------GGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           SF E ++ +                       GV V+ I  D   F  E++P  P A  +
Sbjct: 63  SFAETLNQALQGRSVSTTALLQGQTTLGTTGNGVEVQAIAEDTLPFRLEYNPDSPDAAQT 122

Query: 88  -------GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  G V+ PNVN++ E  DM   +R Y AN+  +  S  MMT  L++
Sbjct: 123 TEDGIPAGYVRMPNVNIVTEMVDMISASRAYEANVTALNASKAMMTKALEI 173


>gi|89092134|ref|ZP_01165089.1| flagellar basal-body rod protein FlgC [Oceanospirillum sp. MED92]
 gi|89083869|gb|EAR63086.1| flagellar basal-body rod protein FlgC [Oceanospirillum sp. MED92]
          Length = 145

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 14/135 (10%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-------------EEVMH 56
           IA S +  Q+ R+   + N+ANA +   +   + YR +   F             E  + 
Sbjct: 9   IAGSAMNAQTIRLNTTASNLANAESVSSSL-DETYRARKPVFAVQQTDPLAEPDNEAGIA 67

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV+V  I   ++   +E++P HP+A+  G V YPNVNV+ E ADM   +R +  N +
Sbjct: 68  AGRGVQVLGIVESEAELRQEYNPAHPMADEQGFVYYPNVNVVEEMADMISASRSFQINTE 127

Query: 117 TIKQSHDMMTTTLDL 131
            +  +  M+  T+ L
Sbjct: 128 IMNTAKQMLQQTIRL 142


>gi|332531616|ref|ZP_08407513.1| flagellar basal-body rod protein FlgC [Hylemonella gracilis ATCC
           19624]
 gi|332038979|gb|EGI75408.1| flagellar basal-body rod protein FlgC [Hylemonella gracilis ATCC
           19624]
          Length = 136

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 4/126 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK----TISFEEVMHGSGGVRVKK 65
           ++ S ++ Q+ R+ +++ N+ANA       G     R+    T+ F+E   G+ GV++  
Sbjct: 9   VSGSAISAQAQRLNVVASNLANADAVAGPDGQFYKARQVVFETLPFDEATPGAAGVKINA 68

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   Q+     ++P HP A+A G V   NVN + E  +M   +R Y  N++ +  +  ++
Sbjct: 69  VTESQAPARRTYEPTHPSADADGYVNQSNVNPVEEMVNMISASRSYQNNVEVMNTAKTLL 128

Query: 126 TTTLDL 131
             TL +
Sbjct: 129 LKTLQM 134


>gi|21672602|ref|NP_660669.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008458|sp|Q8K9K8|FLGC_BUCAP RecName: Full=Flagellar basal-body rod protein flgC
 gi|21623233|gb|AAM67880.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 136

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSD-PYRRKTISFE-EVMHGS--GGVRVK 64
           +IA S ++ QS ++ +I+ N+ANA +     G   PY  K + F+ + +  S  GGV+V 
Sbjct: 8   NIAGSAMSAQSEKINVIASNLANAESIVCKDGKFYPYIAKKVIFKLDPLKNSLIGGVKVF 67

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D +     +DP +P++N +G V   NVN + ET +    +R Y AN++ +K +  M
Sbjct: 68  SIINDLNPMKLIYDPSNPLSNKNGYVLQTNVNPVSETINHISASRSYQANVEVLKTAKSM 127

Query: 125 MTTTLDL 131
           +  TL +
Sbjct: 128 IMKTLSI 134


>gi|86157822|ref|YP_464607.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|220917656|ref|YP_002492960.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|85774333|gb|ABC81170.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|219955510|gb|ACL65894.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 140

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 11/142 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------ 54
           MD+L ++ +++ SGLA +  R+ + + N+ANA TT   P   PYRR     E V      
Sbjct: 1   MDFL-SALNVSASGLAAERVRVNLAASNLANAETT-RGPDGQPYRRLDPVLEAVPFDAAL 58

Query: 55  ---MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GVRV  I          F P HP A+  G V  P+VN + E  ++    + Y
Sbjct: 59  GAAGPAPSGVRVAAIAEGDGPGRRVFSPAHPDADPDGFVTLPDVNPVHEIVNLMSAQKAY 118

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN   +     M    L++ R
Sbjct: 119 EANATAVDTLKTMAQRALEIAR 140


>gi|241766918|ref|ZP_04764724.1| flagellar basal-body rod protein FlgC [Acidovorax delafieldii 2AN]
 gi|241362622|gb|EER58470.1| flagellar basal-body rod protein FlgC [Acidovorax delafieldii 2AN]
          Length = 134

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKKI 66
           ++ S ++ QS R+ +++ N+AN       P    Y+ + + F+    G   S GVRV  I
Sbjct: 9   VSGSAISAQSQRLNVVASNLANVDAVAG-PDGQAYKARQVVFQTAPMGADSSAGVRVSAI 67

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             + +      DP HP A+A G V + NVN + E  +M   +R Y  N++ +  +  ++ 
Sbjct: 68  SENNTPGRRIHDPSHPSADAQGYVTHSNVNAVDEMVNMISASRSYQNNVEVMNTAKSLLL 127

Query: 127 TTLDL 131
            TL +
Sbjct: 128 KTLQM 132


>gi|83716764|ref|YP_438387.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|257141420|ref|ZP_05589682.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|83650589|gb|ABC34653.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
          Length = 138

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 8/131 (6%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-----GVR 62
           A IA S ++ Q+ R+  I+ N+ANA        S  YR +   F  +          G  
Sbjct: 7   AQIAGSAMSAQTVRLNTIASNLANADAASGAEDST-YRARKPVFASIFQLDAQGEPRGAA 65

Query: 63  VKKIGVDQST--FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+ + V +ST    +   PGHP+A+A G V YPNVN + E  DM   +R Y  N++ + +
Sbjct: 66  VQVLDVVKSTEPLRKVHQPGHPLADAEGNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGR 125

Query: 121 SHDMMTTTLDL 131
            + M    L L
Sbjct: 126 VNSMQLELLKL 136


>gi|209695764|ref|YP_002263694.1| flagellar basal body rod protein FlgC [Aliivibrio salmonicida
           LFI1238]
 gi|208009717|emb|CAQ80021.1| flagellar basal-body rod protein FlgC [Aliivibrio salmonicida
           LFI1238]
          Length = 138

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-----GVRV 63
           ++A S ++ +S R+   S N+ANA +   +  S+ Y+ +   F   +  +       V V
Sbjct: 8   NVAGSAMSAESVRLNTTSSNMANADSVSSS-ASETYKARHAIFGAELSKAKYKQDFTVPV 66

Query: 64  KKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           K +G+   Q     E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q     
Sbjct: 67  KVLGIVESQKPLRAEYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNVQVADAG 126

Query: 122 HDMMTTTLDL 131
             M+ +TL +
Sbjct: 127 KQMLQSTLRM 136


>gi|225569965|ref|ZP_03778990.1| hypothetical protein CLOHYLEM_06060 [Clostridium hylemonae DSM
           15053]
 gi|225161435|gb|EEG74054.1| hypothetical protein CLOHYLEM_06060 [Clostridium hylemonae DSM
           15053]
          Length = 134

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 54/117 (46%), Gaps = 17/117 (14%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-----------EVMHGS----- 58
           +  Q  R+ I SENIAN  TT    G+ PYRRK +  E             M G      
Sbjct: 1   MTAQRLRLDIASENIANIETTRTEDGT-PYRRKMVVLESRKENFRSVLGRAMSGQNSANR 59

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           GGV    I  D +      DP HP A+ +G V+ PNV+++ ET D     R Y AN+
Sbjct: 60  GGVAAAAIIDDDTELKAVLDPEHPDADENGYVRMPNVDMIKETTDAMAATRSYEANI 116


>gi|261341496|ref|ZP_05969354.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316292|gb|EFC55230.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
          Length = 141

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 10/131 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGV 61
           ++ S +  Q+ R+  I+ N+ANA T     G + Y+ +   F  V             G 
Sbjct: 9   VSGSAMTAQTVRLNTIASNLANAETPAVDEG-NVYKARRPVFAAVYQNDELMSDKALSGA 67

Query: 62  RVKKIGVDQS-TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           RV+ + V +S   V+ ++P HP+AN  G V YP++NV+ E ADM   +R +  N+  +  
Sbjct: 68  RVQVLDVVESGNAVQRYEPHHPMANPDGYVWYPDINVVEEMADMMSASRNFETNVDVLNN 127

Query: 121 SHDMMTTTLDL 131
              M  + L L
Sbjct: 128 VKSMQQSLLRL 138


>gi|74317654|ref|YP_315394.1| flagellar basal-body rod protein FlgC [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057149|gb|AAZ97589.1| flagellar basal-body rod protein FlgC [Thiobacillus denitrificans
           ATCC 25259]
          Length = 134

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 4/113 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGVRVKK 65
           ++A S +  QS R+  ++ N+ANA +     G  PY+ K + F       +G+ GV V  
Sbjct: 8   NVAGSAMNAQSQRLNTVASNLANADSATSANG-QPYKAKQVVFAAAPVGDNGATGVNVAA 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           +  D S     +DP +P+A+  G V  PNVNV+ E  +M   +R Y +N++ +
Sbjct: 67  VIDDPSPMKTVYDPKNPLADDKGYVTMPNVNVVEEMVNMISASRSYQSNVEMM 119


>gi|59712483|ref|YP_205259.1| flagellar basal body rod protein FlgC [Vibrio fischeri ES114]
 gi|197336337|ref|YP_002156702.1| flagellar basal-body rod protein FlgC [Vibrio fischeri MJ11]
 gi|24459275|gb|AAL86628.1| FlgC [Vibrio fischeri ES114]
 gi|59480584|gb|AAW86371.1| flagellar proximal rod protein FlgC [Vibrio fischeri ES114]
 gi|197317827|gb|ACH67274.1| flagellar basal-body rod protein FlgC [Vibrio fischeri MJ11]
          Length = 138

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-----GVRV 63
           ++  S ++ +S R+   S N+ANA +   +  ++ Y+ +   F   +  +       V V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNMANADSVSSS-AAETYKARQAVFGAELSKAKYKQDHTVPV 66

Query: 64  KKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           K +G+   Q     E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  KVLGIVESQKPLRAEYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+ +TL +
Sbjct: 127 KQMLQSTLRM 136


>gi|88704308|ref|ZP_01102022.1| flagellar basal body rod protein FlgC [Congregibacter litoralis
           KT71]
 gi|88701359|gb|EAQ98464.1| flagellar basal body rod protein FlgC [Congregibacter litoralis
           KT71]
          Length = 140

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 10/139 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
           L  +  +A + L  QS R+  IS N+ANA     +   + YR +   FE +         
Sbjct: 3   LFDAISVAATSLDAQSTRLNTISSNLANANAVSSS-AEETYRAQYPVFETMLNELSSANG 61

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           M    GVRV  I       V+E+ P HP+A+  G +  P +N + E A+M E +R Y  +
Sbjct: 62  MDAVAGVRVSGITQSDLPAVKEYVPTHPMADDEGFIYRPAINSVEEMANMMEASRSYQDS 121

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ +  +  ++  TL L R
Sbjct: 122 IEAMNTAKQLILRTLTLGR 140


>gi|207093458|ref|ZP_03241245.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 72

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 41/69 (59%)

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           KI  D S  + ++DP HP ANA G V YPNVN +VE AD+ E  R Y AN+   + + +M
Sbjct: 3   KIVRDDSEPLMKYDPSHPDANAQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNM 62

Query: 125 MTTTLDLLR 133
               + +L+
Sbjct: 63  AQNAIGMLQ 71


>gi|325288776|ref|YP_004264957.1| flagellar basal-body rod protein FlgC [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324964177|gb|ADY54956.1| flagellar basal-body rod protein FlgC [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 160

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 67/157 (42%), Gaps = 31/157 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIAN-------ARTTGDTPGSDPYRRKTISFE---- 52
           L +   I+ SGL  Q  RM +IS NIAN       A T    P   PYRR+   F     
Sbjct: 3   LFSGMDISASGLTAQRLRMDLISSNIANMNTNHTEATTAAGNP--IPYRRQMAVFSTRNS 60

Query: 53  -----EVMHGSG------GVRVKKIGVDQSTFVEEFDPGHPVAN-------ASGIVKYPN 94
                     +G      GV V +I  D+S F  E+DP  P A          G V++PN
Sbjct: 61  PNDFLSAFRSAGESEVGQGVSVTQILEDESPFKMEYDPESPEAAKVAEEGVPVGYVRHPN 120

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN++ E  DM   +R Y AN+     S  +    L++
Sbjct: 121 VNIVQEMIDMLSASRSYEANVTAFNASKAIAAKALEI 157


>gi|295097205|emb|CBK86295.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 134

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L +   I+ S +A QS R+ + + N+ANA +    P   PYR + + FE       G GG
Sbjct: 3   LFSVFDISGSAMAAQSKRLNVSASNMANADSVAG-PDGQPYRARQVMFEADTSAGQGIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  +    +     ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  
Sbjct: 62  VRVSDVVESTAPDRLVYEPGNPLADEQGYVRMPNVNVVNEMVNTISASRSYQANVEVMNS 121

Query: 121 SHDMMTTTLDL 131
           +  +M  TL L
Sbjct: 122 ARALMQKTLTL 132


>gi|109899404|ref|YP_662659.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas atlantica
           T6c]
 gi|109701685|gb|ABG41605.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas atlantica
           T6c]
          Length = 140

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 6/128 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------GVRV 63
           IA++G++ QS R+   + N+ANA +   +       R  +   E+   S       GV+V
Sbjct: 9   IASTGMSAQSVRLNTTASNVANANSVSSSYDQTYKARHPVFAAELQRASQDQNAGTGVQV 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             I    +    E+ PGHP+A+ +G +  PNVN++ E ADM   ++ Y  N+Q    +  
Sbjct: 69  MGIVESDAPLQIEYSPGHPMADENGYIYKPNVNIVEEMADMMSASKAYETNVQVADTTKR 128

Query: 124 MMTTTLDL 131
           +    L L
Sbjct: 129 LFRNVLRL 136


>gi|268316361|ref|YP_003290080.1| flagellar basal-body rod protein FlgC [Rhodothermus marinus DSM
           4252]
 gi|262333895|gb|ACY47692.1| flagellar basal-body rod protein FlgC [Rhodothermus marinus DSM
           4252]
          Length = 166

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 34/154 (22%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI----------SFEEVM----- 55
           A  GL  Q   M   +ENIANA TT    G+ PY  K             F E++     
Sbjct: 14  AARGLEAQRMAMSAATENIANAATTRTDEGT-PYAIKRAVHTNPEVRNRRFYELLSRLRT 72

Query: 56  --------HGSGGVRVKKIGV----DQSTFVE------EFDPGHPVANASGIVKYPNVNV 97
                   H S    + ++       ++T  E      E+DP HP A+A+G V YP+VNV
Sbjct: 73  APRTQDPRHSSSPSLLTRLPEAELGPETTIAETLRLRYEYDPTHPHADANGYVAYPDVNV 132

Query: 98  LVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           + E A +   NR+Y ANL TI+ + +++  TL++
Sbjct: 133 VEEMAHLISANRIYEANLSTIQAAKEIVKRTLEI 166


>gi|209966304|ref|YP_002299219.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
 gi|209959770|gb|ACJ00407.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
          Length = 146

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 22/141 (15%)

Query: 10  IANSGLAVQSARMQIISENIANARTTG----------------DTPGSDPYRRKTISFEE 53
           IA SG+  Q+ R+   ++NIANAR+TG                DTP   PY   + S + 
Sbjct: 7   IAGSGMTAQARRLAAGADNIANARSTGALPGSAAGAPAGATGADTP--RPYAPVS-SGQT 63

Query: 54  VMHGSGGVRVKKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
            + G  G  +    V    Q  FV EF P  P A+A G+V  PNV+++ ET  M +    
Sbjct: 64  AVTGPDGQGMGTRAVFRATQPAFVPEFSPDSPFADADGMVAAPNVDLVGETVAMTQGLDA 123

Query: 111 YMANLQTIKQSHDMMTTTLDL 131
           Y ANL+  + + ++    L+L
Sbjct: 124 YKANLRVFEAADELTREALNL 144


>gi|237653585|ref|YP_002889899.1| flagellar basal-body rod protein FlgC [Thauera sp. MZ1T]
 gi|237624832|gb|ACR01522.1| flagellar basal-body rod protein FlgC [Thauera sp. MZ1T]
          Length = 134

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---VMHGSGGVRVKK 65
            IA S L  QS R+   + N+ANA +     G  PYR K + F         + GV+V +
Sbjct: 8   QIAGSALNAQSLRLNATASNLANADSVISEDG-QPYRAKQVVFAARPVAGPAAVGVQVTQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +    +     F+P +P AN  G V+ PNVNV+ E  +M   +R Y  N + +  +  ++
Sbjct: 67  VVESAAPLRLVFEPNNPAANPDGYVEMPNVNVVEEMVNMISASRSYQNNAEVMSTARTLL 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 QRTLQI 132


>gi|149188064|ref|ZP_01866359.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
 gi|148838052|gb|EDL54994.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
          Length = 138

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-----GVRV 63
           ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F   +  +       V V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSISSS-AKETYKARHAVFGAELSKAQYNRDHSVPV 66

Query: 64  KKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           K +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  KVLGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+ +TL +
Sbjct: 127 KQMLLSTLRM 136


>gi|171321209|ref|ZP_02910179.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
 gi|171093519|gb|EDT38689.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
          Length = 149

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 18/139 (12%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVMH-GSGG 60
           IA SGL V+  R+++I+ N ANA  +   PG++PYR   +        +F E +    GG
Sbjct: 8   IARSGLDVERQRLELIARNFANAGAS-TAPGAEPYRPLRLVSGAQLEPAFPEALRRAPGG 66

Query: 61  VRV------KKIGVDQSTFVEEF--DPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
           +        + IG+D          D  HP A+A G+V+YP ++   E A + +T R Y 
Sbjct: 67  ISTDRPLGTRAIGIDALDTPPRVMRDTAHPHADAQGLVRYPGLDHAAEMALLVQTLRTYE 126

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN+     +  M    LD+
Sbjct: 127 ANVVMFNAARSMYLRALDI 145


>gi|39933177|ref|NP_945453.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris CGA009]
 gi|192288534|ref|YP_001989139.1| hypothetical protein Rpal_0101 [Rhodopseudomonas palustris TIE-1]
 gi|39652802|emb|CAE25541.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris CGA009]
 gi|192282283|gb|ACE98663.1| protein of unknown function DUF1078 domain protein
           [Rhodopseudomonas palustris TIE-1]
          Length = 136

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 8/132 (6%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-------PYRRKTISFEEVMHGS 58
           A A IA SGL   + R+++ + NIAN R+TG  PG+D       P   K +   +    +
Sbjct: 3   AIASIAVSGLNAATRRLEVSASNIANQRSTGALPGADGTVPPGAPQAYKPLQVNQTDTPT 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GG +        +T V   DP  P A+A G+V  PNV++  E          Y ANL ++
Sbjct: 63  GGTQTSLATTSPAT-VPVSDPQAPFADADGMVAAPNVDLAQEFIGQMVAKYSYTANLASL 121

Query: 119 KQSHDMMTTTLD 130
           +   DM    LD
Sbjct: 122 QADRDMTKALLD 133


>gi|260774936|ref|ZP_05883837.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609191|gb|EEX35349.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 138

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSGG----VRV 63
           ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F  E+     G    V V
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSKAKYGRDHTVPV 66

Query: 64  KKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           + +G+ +S      E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S
Sbjct: 67  QVLGIVESDKPLDAEYNPEHPLANDDGYIYKPNVNVMEEMANMISASRSYQTNVQVADAS 126

Query: 122 HDMMTTTLDL 131
             M+  TL +
Sbjct: 127 KQMLLRTLQM 136


>gi|285018211|ref|YP_003375922.1| flagellar basal body rod protein [Xanthomonas albilineans GPE PC73]
 gi|283473429|emb|CBA15934.1| probable flagellar basal body rod protein [Xanthomonas albilineans]
          Length = 135

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 68/128 (53%), Gaps = 5/128 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG--GVRVKK 65
           +A S L  QS RM  I+ N+ANA +   +     Y+     F+ V   H S   GV VK+
Sbjct: 9   VAGSALQAQSVRMSTIASNLANADSVAGS-AEAAYKPIEPIFQAVRDPHDSALTGVNVKE 67

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I   +   ++ ++PGHP+A+A G +  P+++ + +  ++   +R Y A ++ +  + ++ 
Sbjct: 68  ISQSKDPPIKRYEPGHPLADADGYIYSPDIDPVSQMVNLISASRNYQAGVEVLNTAKELA 127

Query: 126 TTTLDLLR 133
            +TL + R
Sbjct: 128 LSTLTIGR 135


>gi|194365682|ref|YP_002028292.1| flagellar basal body rod protein FlgC [Stenotrophomonas maltophilia
           R551-3]
 gi|254521317|ref|ZP_05133372.1| flagellar basal-body rod protein FlgC [Stenotrophomonas sp. SKA14]
 gi|194348486|gb|ACF51609.1| flagellar basal-body rod protein FlgC [Stenotrophomonas maltophilia
           R551-3]
 gi|219718908|gb|EED37433.1| flagellar basal-body rod protein FlgC [Stenotrophomonas sp. SKA14]
          Length = 135

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 69/128 (53%), Gaps = 5/128 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----GVRVKK 65
           IA S L  QS RM  I+ N++NA T   +  +  Y+     F+ V   +      V+VK+
Sbjct: 9   IAGSALQAQSVRMSTIASNLSNADTVAGSADAV-YKPLEPIFQAVTSKNDPNITSVKVKE 67

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I   ++  ++ ++PGHP+A+A G +  P+V+ + +  ++  T+R Y A ++ +  + ++ 
Sbjct: 68  ITQSEAAPIKRYEPGHPLADADGYIYQPDVDPVAQMVNLISTSRNYQAGVEMLTTAKELA 127

Query: 126 TTTLDLLR 133
             TL + R
Sbjct: 128 LATLTMGR 135


>gi|313905141|ref|ZP_07838510.1| flagellar basal-body rod protein FlgC [Eubacterium cellulosolvens
           6]
 gi|313470044|gb|EFR65377.1| flagellar basal-body rod protein FlgC [Eubacterium cellulosolvens
           6]
          Length = 151

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 21/148 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SFEEV 54
            + S  I+ SG++ Q  R+ I +ENIAN  TT  T    PY RK +         +F   
Sbjct: 3   FLDSFDISASGMSAQRIRLDIAAENIANVDTT-RTENGGPYIRKDVVLASYGKKTTFANA 61

Query: 55  MH-----------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
           +            G  GVRV  I  D       ++P HP A+ +G V+ PNV+V  ET D
Sbjct: 62  LRAARTGSSVISTGKRGVRVAGITDDTRETKRVYNPTHPDADVNGYVEMPNVDVTKETVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDL 131
                R Y AN+  +     M    +D+
Sbjct: 122 AMSATRSYEANVTALNAIKMMTQKAMDI 149


>gi|262273531|ref|ZP_06051345.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
 gi|262222509|gb|EEY73820.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
          Length = 126

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 7/123 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----HGSGG--VRVKKIGV 68
           +A Q+ R+  ++ N+ANA     +  +  YR K   FE VM    +G+ G  VRVK++  
Sbjct: 1   MAAQTVRLNAVASNLANADVVSGSEQTG-YRAKRPVFETVMVDKGNGTQGAMVRVKEVLE 59

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             +     ++P HP+AN  G V Y  VN + E ADM   +R +  N+  + ++  M  + 
Sbjct: 60  SDAPLQRRYEPNHPLANKEGYVFYSQVNPVEEMADMMSASRNFETNVDVMTRARSMQQSI 119

Query: 129 LDL 131
           L L
Sbjct: 120 LRL 122


>gi|192362305|ref|YP_001982402.1| flagellar basal body rod protein FlgC [Cellvibrio japonicus
           Ueda107]
 gi|190688470|gb|ACE86148.1| flagellar basal-body rod protein FlgC [Cellvibrio japonicus
           Ueda107]
          Length = 148

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MHGSG--- 59
           IA +G+  QS R+   + N+ANA++   +   + YR +   F  +       ++G+G   
Sbjct: 9   IAGTGMNAQSLRLNTTASNLANAQSASSSV-DEVYRSRQPVFAAIAQQAMGNLNGAGYSQ 67

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+V  I    +     ++PGHP A+A G V YPNVN + E A+M   +R + 
Sbjct: 68  NELDANAGVQVLGIVESDAPLQRRYEPGHPKADADGYVFYPNVNPVEEMANMISASRSFQ 127

Query: 113 ANLQTIKQSHDMMTTTLDL 131
            N++ +  +  M+   L L
Sbjct: 128 MNVEVMNSAKQMVQRVLTL 146


>gi|332162903|ref|YP_004299480.1| flagellar basal-body rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604250|emb|CBY25748.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325667133|gb|ADZ43777.1| Flagellar basal-body rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863353|emb|CBX73476.1| flagellar basal-body rod protein flgC [Yersinia enterocolitica
           W22703]
          Length = 141

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 10/132 (7%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--------GSGG 60
            ++ S +  Q+ R+  I+ N+ANA +   +  +  Y+ ++  F  V          G  G
Sbjct: 8   RVSGSAMTAQTIRLNAIASNLANAESPAAS-AATVYKARSPVFSAVYSPRSATNPGGVNG 66

Query: 61  VRVKKIGV-DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +V+ + V +    V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  N++ + 
Sbjct: 67  AQVQVLDVVETGGSVQRYEPNHPLANPQGYVFYPAVNVVSEMADMMSASRSFETNVEVLN 126

Query: 120 QSHDMMTTTLDL 131
               M  + L L
Sbjct: 127 SVKSMQQSVLRL 138


>gi|71280491|ref|YP_268220.1| flagellar basal-body rod protein FlgC [Colwellia psychrerythraea
           34H]
 gi|71146231|gb|AAZ26704.1| flagellar basal-body rod protein FlgC [Colwellia psychrerythraea
           34H]
          Length = 143

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 12/133 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----GSGGVRVKK 65
           I  SG++ QS R+   + NIANA +   +     YR +   F   M     G G      
Sbjct: 9   ITGSGMSAQSVRLNTTASNIANADSVSSS-ADKTYRARHPVFAAAMQEAAAGQGKSDGSG 67

Query: 66  IGVDQSTFVE-------EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           +GV+    VE       E+ P HP+A+  G +  PNVNV+ E  +M   +R Y  N+Q  
Sbjct: 68  VGVNVLGIVESDKPLNVEYAPSHPMADKDGYIYKPNVNVIEEMTNMISASRSYQTNVQLA 127

Query: 119 KQSHDMMTTTLDL 131
           + + +M+  TL L
Sbjct: 128 ESAKNMLNKTLQL 140


>gi|153949008|ref|YP_001399632.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
 gi|152960503|gb|ABS47964.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
          Length = 141

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 10/132 (7%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-----GVRV 63
            +A S +  Q+ R+  I+ N+ANA +   +  +  Y+ ++  F  V          G++ 
Sbjct: 8   RVAGSAMTAQTIRLNTIASNLANAESPAAS-AATVYKARSPVFSAVYSARAETEPQGIQS 66

Query: 64  KKIGV----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            ++ V    +    V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  N++ + 
Sbjct: 67  AQVQVLDVVEVGGSVQRYEPNHPMANPQGYVFYPAVNVVSEMADMMSASRSFETNVEVLN 126

Query: 120 QSHDMMTTTLDL 131
               M  + L L
Sbjct: 127 SVKSMQQSVLKL 138


>gi|260222465|emb|CBA32056.1| Flagellar basal-body rod protein flgC [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 134

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKK 65
           +++ S ++ QS R+ +++ N+ANA      P    Y+ + + FE V  GS    GV+V  
Sbjct: 8   NVSGSAVSAQSQRLNVVASNLANADAVAG-PDGQGYKSRQVVFETVPMGSEASSGVKVSS 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I        +  +P HP A+A G V   NVN + E  +M   +R Y  N++ +  +  ++
Sbjct: 67  IKESNEPLRKVHNPLHPSADADGYVTQSNVNPVEEMVNMISASRSYQNNVEVMNTAKSLL 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 LKTLQM 132


>gi|292492361|ref|YP_003527800.1| flagellar basal-body rod protein FlgC [Nitrosococcus halophilus
           Nc4]
 gi|291580956|gb|ADE15413.1| flagellar basal-body rod protein FlgC [Nitrosococcus halophilus
           Nc4]
          Length = 137

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 7/128 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------GSGGVRV 63
           I+ + ++ Q+ R+   + N+ANA +   +  +  YR +   F  V++       +GGV+V
Sbjct: 9   ISGTAMSAQTLRLNTTASNLANADSVSSSV-NQTYRARHPVFATVLNDFNQEEATGGVQV 67

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             +   ++   +E+ P HP+AN +G + +PNVN + E A+M   +R Y  +++    S  
Sbjct: 68  LGVVESKAPLQQEYAPDHPMANEAGYIFHPNVNPIEEMANMISASRSYQNSVEVANTSKQ 127

Query: 124 MMTTTLDL 131
           ++  TL L
Sbjct: 128 LLLRTLQL 135


>gi|157373209|ref|YP_001471809.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
 gi|157315583|gb|ABV34681.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
          Length = 139

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            IA +G+  QS R+  ++ N+ANA    +T  S  YR     F  + + +    V    V
Sbjct: 8   QIAGAGMHAQSIRLNTVASNLANAGAAAETQDS-AYRALKPVFSTIYNQTQAGEVSGAQV 66

Query: 69  DQSTFVE-------EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           + +  VE        ++P HP A+  G V Y NVN + E ADM   +R +  +++ + Q+
Sbjct: 67  EVAAIVETDAPLDMRYEPDHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSVEVMNQA 126

Query: 122 HDMMTTTLDL 131
             M    L L
Sbjct: 127 RSMQQGLLQL 136


>gi|22127330|ref|NP_670753.1| flagellar basal body rod protein FlgC [Yersinia pestis KIM 10]
 gi|45442794|ref|NP_994333.1| flagellar basal body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51597639|ref|YP_071830.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 32953]
 gi|108809057|ref|YP_652973.1| flagellar basal body rod protein FlgC [Yersinia pestis Antiqua]
 gi|108810746|ref|YP_646513.1| flagellar basal body rod protein FlgC [Yersinia pestis Nepal516]
 gi|145597815|ref|YP_001161891.1| flagellar basal body rod protein FlgC [Yersinia pestis Pestoides F]
 gi|150260251|ref|ZP_01916979.1| lateral flagellar rod protein [Yersinia pestis CA88-4125]
 gi|162418952|ref|YP_001604849.1| flagellar basal body rod protein FlgC [Yersinia pestis Angola]
 gi|165924966|ref|ZP_02220798.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939065|ref|ZP_02227617.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008997|ref|ZP_02229895.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212219|ref|ZP_02238254.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167398642|ref|ZP_02304166.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167418994|ref|ZP_02310747.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425145|ref|ZP_02316898.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167466343|ref|ZP_02331047.1| flagellar basal-body rod protein FlgC [Yersinia pestis FV-1]
 gi|170022969|ref|YP_001719474.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186896773|ref|YP_001873885.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|218927910|ref|YP_002345785.1| flagellar basal body rod protein FlgC [Yersinia pestis CO92]
 gi|229837406|ref|ZP_04457569.1| Flagellar basal-body rod protein flgC [Yersinia pestis Pestoides A]
 gi|229840619|ref|ZP_04460778.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842830|ref|ZP_04462982.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900943|ref|ZP_04516067.1| Flagellar basal-body rod protein flgC [Yersinia pestis Nepal516]
 gi|270487675|ref|ZP_06204749.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294502786|ref|YP_003566848.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|21960411|gb|AAM87004.1|AE013948_12 flagellar biosynthesis protein, cell-proximal portion of basal-body
           rod [Yersinia pestis KIM 10]
 gi|45437660|gb|AAS63210.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51590921|emb|CAH22577.1| Putative flagellar basal-body rod protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774394|gb|ABG16913.1| flagellar basal-body rod protein [Yersinia pestis Nepal516]
 gi|108780970|gb|ABG15028.1| putative flagellar basal-body rod protein [Yersinia pestis Antiqua]
 gi|115346521|emb|CAL19397.1| putative flagellar basal-body rod protein [Yersinia pestis CO92]
 gi|145209511|gb|ABP38918.1| flagellar basal-body rod protein [Yersinia pestis Pestoides F]
 gi|149289659|gb|EDM39736.1| lateral flagellar rod protein [Yersinia pestis CA88-4125]
 gi|162351767|gb|ABX85715.1| flagellar basal-body rod protein FlgC [Yersinia pestis Angola]
 gi|165913021|gb|EDR31646.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923166|gb|EDR40317.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992336|gb|EDR44637.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206965|gb|EDR51445.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962988|gb|EDR59009.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051146|gb|EDR62554.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055908|gb|EDR65689.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169749503|gb|ACA67021.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186699799|gb|ACC90428.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|229682282|gb|EEO78374.1| Flagellar basal-body rod protein flgC [Yersinia pestis Nepal516]
 gi|229690097|gb|EEO82154.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696985|gb|EEO87032.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705529|gb|EEO91539.1| Flagellar basal-body rod protein flgC [Yersinia pestis Pestoides A]
 gi|262360818|gb|ACY57539.1| flagellar basal body rod protein [Yersinia pestis D106004]
 gi|270336179|gb|EFA46956.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294353245|gb|ADE63586.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|320016713|gb|ADW00285.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 141

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 12/133 (9%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----------S 58
            +A S +  Q+ R+  I+ N+ANA +   +  +  Y+ ++  F  V             S
Sbjct: 8   RVAGSAMTAQTIRLNTIASNLANAESPAAS-AATVYKARSPVFSAVYSARTAADPRGVQS 66

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+V  + V+    V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  N++ +
Sbjct: 67  AQVQVLDV-VEVGGSVQRYEPNHPMANPQGYVFYPAVNVVSEMADMMSASRSFETNVEVL 125

Query: 119 KQSHDMMTTTLDL 131
                M  + L L
Sbjct: 126 NSVKSMQQSVLKL 138


>gi|88799019|ref|ZP_01114600.1| flagellar basal-body rod protein FlgC [Reinekea sp. MED297]
 gi|88778246|gb|EAR09440.1| flagellar basal-body rod protein FlgC [Reinekea sp. MED297]
          Length = 146

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 16/137 (11%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------------ 57
           I+ SG+  QS R+   + N+ANA++   +   + YR +   F+ +               
Sbjct: 9   ISGSGMNAQSIRLNTTASNLANAQSVSSSI-DETYRARKPVFQHIQSQYIDRSLVPVDMD 67

Query: 58  ---SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                GV V  I    +     ++P HP+A+  G V YPNVNV+ E ADM   +R +  N
Sbjct: 68  YDVGNGVEVAAIVEKDAPLEIRYEPTHPMADEEGYVYYPNVNVVEEMADMMSASRSFTVN 127

Query: 115 LQTIKQSHDMMTTTLDL 131
           ++    +  +M  TL +
Sbjct: 128 VEVFNTAKTLMQKTLTM 144


>gi|219670161|ref|YP_002460596.1| flagellar basal-body rod protein FlgC [Desulfitobacterium hafniense
           DCB-2]
 gi|219540421|gb|ACL22160.1| flagellar basal-body rod protein FlgC [Desulfitobacterium hafniense
           DCB-2]
          Length = 176

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 43/171 (25%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTT-----GDTPGSDPYRRKTISFE------ 52
           +  S  I+ SGL  Q  R+ +IS NIAN  TT      +     PY+R+ + F+      
Sbjct: 3   IFGSMDISASGLTAQRLRLDVISNNIANINTTRTGQLTEAGNQIPYQRQVVVFKARGTES 62

Query: 53  -------EVMHG--------------SG----GVRVKKIGVDQSTFVEEFDPGHPVANAS 87
                  + + G              SG    GV V+ I  D   F  E++P  P A  +
Sbjct: 63  SFAETLNQALQGRSVSTTALLQGQTTSGATGNGVEVQAIAEDTLPFRLEYNPDSPDAAQT 122

Query: 88  -------GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  G V+ PNVN++ E  DM   +R Y AN+  +  S  MM+  L++
Sbjct: 123 TEDGIPAGYVRMPNVNIVTEMVDMISASRAYEANVTALNASKAMMSKALEI 173


>gi|307546970|ref|YP_003899449.1| flagellar basal body rod protein FlgC [Halomonas elongata DSM 2581]
 gi|307218994|emb|CBV44264.1| flagellar basal body rod protein FlgC [Halomonas elongata DSM 2581]
          Length = 135

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKK 65
            I+ S ++ QS RM + + N+ANA +    P  + YR K + FE         GGV V++
Sbjct: 8   EISGSAMSAQSQRMNVTASNLANADSVAG-PDGEAYRAKQVLFETRAQSRTGVGGVGVRE 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D S    ++ P HP+A+  G V  PNV+   E  +M   +R Y AN++ +  +  ++
Sbjct: 67  VIEDPSPMRRQYRPEHPLADDQGYVDMPNVDPAAEMVNMISASRSYQANVEVMDTNKQLL 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 LKTLSM 132


>gi|91794997|ref|YP_564648.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
           OS217]
 gi|91716999|gb|ABE56925.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
           OS217]
          Length = 139

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-----MHGSGGVRV 63
            IA +G+  Q+ R+  ++ NIANA T  +TP  + YR     F  V      + + G  V
Sbjct: 8   QIAGAGMNAQTIRLNTVASNIANAGTAAETP-EEAYRALKPVFATVYEQFQQNATSGASV 66

Query: 64  KKIGVDQST--FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           + + + Q++      ++P HP A+  G V Y NVN + E ADM   +R +  +++ + ++
Sbjct: 67  EVMDIVQTSAPLDLRYEPNHPYADEQGYVAYSNVNTVDEMADMMAASRSFETSVEIMNRA 126

Query: 122 HDMMTTTLDL 131
             M    L L
Sbjct: 127 RSMQQGLLQL 136


>gi|316931494|ref|YP_004106476.1| hypothetical protein Rpdx1_0099 [Rhodopseudomonas palustris DX-1]
 gi|315599208|gb|ADU41743.1| protein of unknown function DUF1078 domain protein
           [Rhodopseudomonas palustris DX-1]
          Length = 136

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSD-------PYRRKTISFEEVMHGSGG 60
           A IA SGL   + R+++ + NIAN R+TG  PG++       P   K +   +    +GG
Sbjct: 5   ASIAVSGLNAATRRLEVSASNIANQRSTGTLPGANGTVPAGAPQAYKPLQVNQTDTSTGG 64

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
            +        +T V   DP  P A+A G+V  PNV++  E          Y ANL +++ 
Sbjct: 65  TQTSLATTSPAT-VPVSDPQAPFADADGMVAAPNVDLAQEFIGQMVAKYSYAANLASLQA 123

Query: 121 SHDMMTTTLD 130
             DM    LD
Sbjct: 124 DRDMTKALLD 133


>gi|308050026|ref|YP_003913592.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
 gi|307632216|gb|ADN76518.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
          Length = 138

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 7/129 (5%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-HGSGG---VRVK 64
            IA S + VQS R+  ++ N+ANA        S  YR     F+ +   G+GG     V+
Sbjct: 8   QIAGSAMNVQSIRLNTVASNLANAEAAAPDEAS-AYRAIKPVFQTLYEQGNGGGVSANVQ 66

Query: 65  KIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             GV QS       ++P HP+AN  G V Y NVN + E ADM    R +  ++  + ++ 
Sbjct: 67  IAGVVQSDAPLESRYEPDHPMANEQGYVTYSNVNTVQEMADMMAATRAFETSVDIMSRAR 126

Query: 123 DMMTTTLDL 131
            M    L L
Sbjct: 127 SMQQGLLKL 135


>gi|325567533|ref|ZP_08144200.1| flagellar basal-body rod protein FlgC [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158966|gb|EGC71112.1| flagellar basal-body rod protein FlgC [Enterococcus casseliflavus
           ATCC 12755]
          Length = 138

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 9/128 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GVRVKK 65
           SGLA++  ++  IS NIAN  T   T  +  Y++K+I F E +  S        GV+V  
Sbjct: 12  SGLALERLKLDTISSNIANVNT-NQTQTTAAYQKKSILFSENLKNSREGTPATYGVKVTG 70

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  D++  +  +DP +P ANA G V   NV++  E   M +  R Y AN+   + +  ++
Sbjct: 71  IAADETEKLT-YDPTNPAANAEGYVGQSNVDIADEMVAMLQAVRTYEANVSASEMNKTIL 129

Query: 126 TTTLDLLR 133
              L++ +
Sbjct: 130 KKALEISK 137


>gi|300114801|ref|YP_003761376.1| flagellar basal-body rod protein FlgC [Nitrosococcus watsonii
           C-113]
 gi|299540738|gb|ADJ29055.1| flagellar basal-body rod protein FlgC [Nitrosococcus watsonii
           C-113]
          Length = 137

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 7/128 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------HGSGGVRV 63
           IA + ++ Q+ R+   + N+ANA +   +     YR +   F  ++        +GGV+V
Sbjct: 9   IAGTAMSAQTLRLNTTASNLANADSVSSSI-HQTYRARQPVFATLLDELNPAAPAGGVQV 67

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             +    +   +E+ P HP+AN +G + +PNVN + E A+M   +R Y  N++    S  
Sbjct: 68  LGVVESGAPLQQEYAPDHPMANEAGYIFHPNVNSIEEMANMISASRSYQNNVEMANTSKQ 127

Query: 124 MMTTTLDL 131
           ++  TL L
Sbjct: 128 LLLRTLQL 135


>gi|167576660|ref|ZP_02369534.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           TXDOH]
          Length = 138

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 8/131 (6%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-----GVR 62
           A IA S ++ Q+ R+  I+ N+ANA        S  YR +   F  +          G  
Sbjct: 7   AQIAGSAMSAQTVRLNTIASNLANADAASGAEDST-YRARKPVFASIFQLDAQGEPRGAA 65

Query: 63  VKKIGVDQST--FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+ + V +ST    +   PGHP+A+  G V YPNVN + E  DM   +R Y  N++ + +
Sbjct: 66  VQVLDVVKSTEPLRKVHQPGHPLADDEGNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGR 125

Query: 121 SHDMMTTTLDL 131
            + M    L L
Sbjct: 126 VNSMQLELLKL 136


>gi|288960379|ref|YP_003450719.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288912687|dbj|BAI74175.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 134

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 6/132 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTP---GSDPYRRKTISFEEVMH--GS 58
           ++ S  IA  GL  Q+ R+   + N+AN R+T   P   GS   +R       V    G+
Sbjct: 1   MVGSIGIALGGLTAQTRRLDASASNVANVRSTSAVPAKDGSTDGKRAAYQPLAVAQTDGN 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            G R     +  + +++E+ P    AN SG+V  PNV++  E       NR Y AN+  +
Sbjct: 61  PGTRTTFTPITPA-YLQEYAPDDSAANGSGMVAAPNVDLATERITQMAANRAYGANVAVV 119

Query: 119 KQSHDMMTTTLD 130
           +   +MM + LD
Sbjct: 120 RTQDEMMKSLLD 131


>gi|331005439|ref|ZP_08328818.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
 gi|330420715|gb|EGG95002.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
          Length = 144

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 14/135 (10%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGV 68
           I+ +G++VQ AR+ +++ N+AN+ TT    G  PY+   +S  E +     V  + + G 
Sbjct: 9   ISAAGMSVQKARVDVVALNLANSETTKTAAGG-PYKPLQVSISEAIGSRSFVDTLNQTGS 67

Query: 69  D--------QSTFVEEFD----PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           D         S+  E       P HP A++ G+V YPN+N   E  ++ E  R Y AN++
Sbjct: 68  DLYGSYVSKVSSVSEPIKMVHKPNHPDADSEGMVAYPNINPASEMVNLLEATRAYEANVK 127

Query: 117 TIKQSHDMMTTTLDL 131
            +  S  +   TL++
Sbjct: 128 ALNASISLAQATLEI 142


>gi|157147104|ref|YP_001454423.1| flagellar basal body rod protein FlgC [Citrobacter koseri ATCC
           BAA-895]
 gi|157084309|gb|ABV13987.1| hypothetical protein CKO_02881 [Citrobacter koseri ATCC BAA-895]
          Length = 141

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 8/131 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTP-GSDPYRRKTISF----EEVMHGSG--GV 61
            ++ S +  Q+ R+  I+ N+ANA T   T  G    RR   +     +E+M+     G 
Sbjct: 8   RVSGSAMTAQTVRLNTIASNLANAETASATEDGVYKARRPVFAAVYKNDELMNSRALTGA 67

Query: 62  RVKKIGV-DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           RV+ + V +    V+ ++P +P+AN  G V YP+VNV+ E ADM   +R +  N+  +  
Sbjct: 68  RVQVMDVVETGNAVQRYEPHNPMANTDGYVYYPDVNVVEEMADMMSASRGFETNVDVLNS 127

Query: 121 SHDMMTTTLDL 131
              M  + L L
Sbjct: 128 VKSMQQSLLRL 138


>gi|148976392|ref|ZP_01813098.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
 gi|145964215|gb|EDK29471.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
          Length = 137

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 5/128 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---VRVKK 65
           ++  S ++ +S R+   S N+ANA +   +       R  +   E+         V VK 
Sbjct: 8   NVTGSAMSAESVRLNTTSSNLANADSVSSSAKETYKARHAVFGAELNRARNSDHTVPVKV 67

Query: 66  IGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +G+ +S      E++P HP+AN  G +   NVNV+ E A+M   +R Y  N+Q    S  
Sbjct: 68  LGIVESDKPLSAEYNPDHPLANNEGFIYKSNVNVMEEMANMISASRAYQTNVQVADSSKQ 127

Query: 124 MMTTTLDL 131
           M+  TL +
Sbjct: 128 MLLRTLQM 135


>gi|297520377|ref|ZP_06938763.1| flagellar basal body rod protein FlgC [Escherichia coli OP50]
          Length = 103

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 39  PGSDPYRRKTISFE---EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNV 95
           P   PYR K + F+        +GGV+V  +   Q+     ++PG+P+A+A G VK PNV
Sbjct: 6   PDGQPYRAKQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNV 65

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +V+ E  +    +R Y AN++ +     MM  TL L
Sbjct: 66  DVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLTL 101


>gi|304310785|ref|YP_003810383.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium HdN1]
 gi|301796518|emb|CBL44726.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium HdN1]
          Length = 145

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 13/135 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---------- 59
           IA SG++ Q+ R+   S NIANA +   +       R  +   +     G          
Sbjct: 9   IAGSGMSAQTVRLNTTSSNIANAESVASSVDKTYRARHPVFMAQYTAALGNRPTDPLTGK 68

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV V  I   Q+     ++P HP A+  G V YPNVNV+ E  +M   +R +  N  
Sbjct: 69  ANAGVDVVGIVESQAPLQLRYEPDHPYADEKGYVAYPNVNVVEEMTNMISASRSFQTNAD 128

Query: 117 TIKQSHDMMTTTLDL 131
            +  +  M++  L+L
Sbjct: 129 VMNSAKQMLSAVLNL 143


>gi|120597303|ref|YP_961877.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|146294552|ref|YP_001184976.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
           CN-32]
 gi|120557396|gb|ABM23323.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|145566242|gb|ABP77177.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
           CN-32]
          Length = 138

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGSGG--V 61
            IA +G+  Q+ R+  ++ N+ANA    +TP S  YR       TI ++    G+ G  +
Sbjct: 8   QIAGAGMNAQTIRLNTVASNLANAGAAAETPES-AYRALKPVFATI-YDSTQQGAIGASI 65

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V  I    +     ++P HP AN  G V Y NVN + E ADM   +R +  +++ + ++
Sbjct: 66  EVSDIVQADAPLDMRYEPNHPFANEQGYVAYSNVNTIEEMADMMAASRSFETSVEVMNRA 125

Query: 122 HDMMTTTLDL 131
             M    L L
Sbjct: 126 RSMQQGLLQL 135


>gi|221069324|ref|ZP_03545429.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni KF-1]
 gi|264676568|ref|YP_003276474.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni
           CNB-2]
 gi|299531288|ref|ZP_07044698.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni S44]
 gi|220714347|gb|EED69715.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni KF-1]
 gi|262207080|gb|ACY31178.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni
           CNB-2]
 gi|298720695|gb|EFI61642.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni S44]
          Length = 134

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV---MHGSGGVRVKK 65
           +I+ S ++ QS R+ +++ N+AN        GS  Y+ + + F+ V     GS GV+V  
Sbjct: 8   NISGSAVSAQSQRLNVVASNLANVDAVAGPDGS-VYKARQVVFQTVPMGNDGSAGVKVNA 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  D +      DP +P+A+  G V + NV+ + E  +M   +R Y  N++ +  +  ++
Sbjct: 67  ISEDNTPGRRIHDPSNPLADGEGYVTHSNVSAVDEMVNMISASRSYQNNVEVMNTAKTLL 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 LKTLQM 132


>gi|15616944|ref|NP_240157.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219682252|ref|YP_002468636.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|11386805|sp|P57420|FLGC_BUCAI RecName: Full=Flagellar basal-body rod protein flgC
 gi|25298910|pir||C84969 flagellar basal-body rod protein flgC [imported] - Buchnera sp.
           (strain APS)
 gi|10039009|dbj|BAB13043.1| flagellar basal-body rod protein flgC [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621985|gb|ACL30141.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|311086076|gb|ADP66158.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           LL01 (Acyrthosiphon pisum)]
 gi|311086647|gb|ADP66728.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|311087233|gb|ADP67313.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
 gi|311087752|gb|ADP67831.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           JF98 (Acyrthosiphon pisum)]
          Length = 136

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 4/127 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFE-EVMHGS--GGVRVK 64
           +IA S +  QS ++ +I+ N+AN  +T    G   PY  K + F  +    S  GGV++ 
Sbjct: 8   NIAGSAMIAQSQKLNVIASNLANMDSTIYKNGKFYPYIAKQVVFSLDTAKNSKIGGVKIS 67

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D S     +DP +P+AN  G +   NVN + E  +     R Y AN++ +K +  M
Sbjct: 68  AIIDDPSPMKLIYDPNNPMANNKGYILASNVNPITEMVNNIAAARSYQANIEVLKTAKSM 127

Query: 125 MTTTLDL 131
           +  TL +
Sbjct: 128 IMKTLTI 134


>gi|255022067|ref|ZP_05294073.1| flagellar basal-body rod protein FlgC [Acidithiobacillus caldus
           ATCC 51756]
 gi|254968553|gb|EET26109.1| flagellar basal-body rod protein FlgC [Acidithiobacillus caldus
           ATCC 51756]
          Length = 141

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 8/115 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGV 61
           +I +  +  + ++ Q+AR+  +  N+ANA +   + G+ PY+ + + FE V  G  SGG+
Sbjct: 8   IINALSVTGAAMSAQNARLGAVVSNLANANSVTSSTGT-PYKAREVVFEAVPDGTASGGI 66

Query: 62  RVKKI---GVDQSTFVEE--FDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            ++ +   GV QS       ++PG+P+AN +G V+  NVN +    DM   +R Y
Sbjct: 67  PLESVRVAGVVQSQAPSPLLYEPGNPLANKAGYVRGSNVNPIESMVDMLSASRAY 121


>gi|260768785|ref|ZP_05877719.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|260616815|gb|EEX42000.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|315180488|gb|ADT87402.1| flagellar basal-body rod protein C [Vibrio furnissii NCTC 11218]
          Length = 140

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 9/129 (6%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------GSGGVRVKKI 66
           S +  Q+ R+  IS N+ANA +    P +D Y+     F  V +       SG V V+  
Sbjct: 12  SAMMAQTIRLNTISSNLANADSVASNP-NDVYKPLKPVFTSVFNSLSAQSASGSVPVRIA 70

Query: 67  GVDQSTFVEE--FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            V + + + E  ++PGHP+AN  G V +  +NV+ E ADM  + R + AN++ +     M
Sbjct: 71  DVIEVSGMSESRYEPGHPLANNEGYVYHSGINVVNEMADMMSSTRSFEANVEVLNNVKSM 130

Query: 125 MTTTLDLLR 133
             + + +  
Sbjct: 131 QQSLMRIWE 139


>gi|119477955|ref|ZP_01618055.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2143]
 gi|119448868|gb|EAW30110.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2143]
          Length = 147

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 17/138 (12%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------------- 55
           IA  G++ QS R+   + N+ANA+        + YR +   FE +               
Sbjct: 9   IAGMGMSAQSIRLNTTASNLANAQAASSNI-DEVYRARHPVFETMRMDMMANNNGSMPTL 67

Query: 56  --HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
               S G+RV  I    +  V  ++P H  A+  G V YPNVNV+ E ADM   +R +  
Sbjct: 68  ADDASMGMRVTGIVESDAPLVRRYEPNHLKADEEGYVYYPNVNVVEEMADMISASRSFQV 127

Query: 114 NLQTIKQSHDMMTTTLDL 131
           N++ +  +  MM   L L
Sbjct: 128 NVELMNSAKQMMQGLLRL 145


>gi|219681697|ref|YP_002468083.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471393|ref|ZP_05635392.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           LSR1 (Acyrthosiphon pisum)]
 gi|219624540|gb|ACL30695.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 136

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 4/127 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFE-EVMHGS--GGVRVK 64
           +IA S +  QS ++ +I+ N+AN  +T    G   PY  K + F  +    S  GGV++ 
Sbjct: 8   NIAGSAMIAQSQKLNVIASNLANMDSTIYKNGKFYPYIAKQVVFSLDTSKNSKIGGVKIS 67

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  D S     +DP +P+AN  G +   NVN + E  +     R Y AN++ +K +  M
Sbjct: 68  AIIDDPSPMKLIYDPNNPMANNKGYILASNVNPITEMVNNIAAARSYQANIEVLKTAKSM 127

Query: 125 MTTTLDL 131
           +  TL +
Sbjct: 128 IMKTLTI 134


>gi|289679031|ref|ZP_06499921.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           syringae FF5]
          Length = 124

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 53/121 (43%), Gaps = 16/121 (13%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---------------GVRVKKIGVDQ 70
           + NIANA T   +     YR +   F  VM G                 GV+V  I  D 
Sbjct: 3   ASNIANAETVSSSM-DQTYRARHPVFATVMQGQQSTGGSLFQDQGEAGQGVQVNGIIEDS 61

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           S     ++P HP A+  G V YPNVNV+ E ADM   +R +  N + +  +  MM   L 
Sbjct: 62  SNLEARYEPNHPSADKDGYVYYPNVNVVEEMADMISASRSFQTNAEIMNTAKSMMQKVLT 121

Query: 131 L 131
           L
Sbjct: 122 L 122


>gi|284989558|ref|YP_003408112.1| hypothetical protein Gobs_0980 [Geodermatophilus obscurus DSM
           43160]
 gi|284062803|gb|ADB73741.1| protein of unknown function DUF1078 domain protein
           [Geodermatophilus obscurus DSM 43160]
          Length = 134

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 7/129 (5%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
           S  I+ SGL V    +  +S+NIAN      T   D ++ + I  + V +GSG  GVRV 
Sbjct: 6   SLGISGSGLLVHRKWLDAVSDNIANINNVTSTD-QDAFQERLIVAQAVDYGSGEGGVRVA 64

Query: 65  K--IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           +   G  +   V E  P HP+A+A+G V+YP++++  +   +    R Y ANL  ++++ 
Sbjct: 65  RAEYGSAEGRMVHE--PDHPLADANGYVRYPDIDLGDQMTQLIMAQRGYQANLAVVERAT 122

Query: 123 DMMTTTLDL 131
                 L L
Sbjct: 123 TAYQAALQL 131


>gi|126176158|ref|YP_001052307.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
 gi|304412510|ref|ZP_07394116.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|307307169|ref|ZP_07586907.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
 gi|125999363|gb|ABN63438.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
 gi|304349152|gb|EFM13564.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|306910408|gb|EFN40839.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
          Length = 138

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGSGG--V 61
            IA +G+  Q+ R+  ++ N+ANA T  + P S  YR       TI ++    G+ G  +
Sbjct: 8   QIAGAGMNAQTIRLNTVASNLANAGTAAENPES-AYRALKPVFATI-YDSTQQGAIGASI 65

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V  I    +     ++P HP AN  G V Y NVN + E ADM   +R +  +++ + ++
Sbjct: 66  EVSDIVQADAPLDMRYEPNHPFANEQGYVAYSNVNTIEEMADMMAASRSFETSVEIMNRA 125

Query: 122 HDMMTTTLDL 131
             M    L L
Sbjct: 126 RSMQQGLLQL 135


>gi|77165840|ref|YP_344365.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani ATCC
           19707]
 gi|254433209|ref|ZP_05046717.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani AFC27]
 gi|76884154|gb|ABA58835.1| Flagellar basal-body rod protein FlgC [Nitrosococcus oceani ATCC
           19707]
 gi|207089542|gb|EDZ66813.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani AFC27]
          Length = 137

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 7/128 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------SGGVRV 63
           IA + ++ Q+ R+   + N+ANA +   +     YR +   F  ++        +GGV+V
Sbjct: 9   IAGTAMSAQTLRLNTTASNLANADSVSSSIDQT-YRARQPVFATLLDKFNPEAPAGGVQV 67

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             +    +   +E+ P HP+AN +G + +PNVN + E A+M   +R Y  N++    S  
Sbjct: 68  LGVVESGAPLQQEYAPDHPMANEAGYIFHPNVNSIEEMANMISASRNYENNVEMANTSKQ 127

Query: 124 MMTTTLDL 131
           ++  TL L
Sbjct: 128 LLLRTLQL 135


>gi|251772446|gb|EES53013.1| flagellar basal-body rod protein FlgC [Leptospirillum
           ferrodiazotrophum]
          Length = 145

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 13/134 (9%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVMHGSGG 60
            I+ SGL  +  R+ +++ N+ANA  T   P     RR  I        SF ++++    
Sbjct: 8   RISASGLEAERVRLNVLAGNLANADATRGNPNGTYERRDVIFAAVAPGRSFSDILNSPQE 67

Query: 61  VRVKKIGV-----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             VK++ V     D    V  +DP +P A+  G V +PNV+ L E  ++ + +R Y ANL
Sbjct: 68  SPVKEVRVLGMVRDPRPLVRVYDPNNPDADRDGYVMHPNVSKLEEMTNLIDASRAYEANL 127

Query: 116 QTIKQSHDMMTTTL 129
             +  +  M +  L
Sbjct: 128 TAMDTTKRMASKDL 141


>gi|90415320|ref|ZP_01223254.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2207]
 gi|90332643|gb|EAS47813.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2207]
          Length = 141

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 10/133 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------GS---GG 60
           IA S +  Q  RM   + N+ANA T   +   D ++ K   F+ ++       GS   GG
Sbjct: 9   IAASAMNAQMVRMNSTASNMANAGTVSSS-AEDAFKAKRPVFQALLQEHQLDQGSQFLGG 67

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +  D +   +  DPG+P+A+  G V   NVN + E  +M    R Y  N++ +  
Sbjct: 68  VKVLDMVDDTAPNKKMHDPGNPLADKDGFVFSSNVNEVTEMVEMMGAARSYQNNVEVVNT 127

Query: 121 SHDMMTTTLDLLR 133
           + ++M  TLD+ +
Sbjct: 128 ARELMMRTLDITK 140


>gi|190574265|ref|YP_001972110.1| flagellar basal body rod protein FlgC [Stenotrophomonas maltophilia
           K279a]
 gi|190012187|emb|CAQ45810.1| putative flagellar basal-body rod protein FlgC [Stenotrophomonas
           maltophilia K279a]
          Length = 135

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 5/128 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----GVRVKK 65
           IA S L  QS RM  I+ N++NA T   +  +  Y+     F+ V   +      V+VK+
Sbjct: 9   IAGSALQAQSVRMSTIASNLSNADTVAGSADAV-YKPLEPIFQAVTSKNDPNITSVKVKE 67

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I    +  ++ ++PGHP+A+  G +  P+V+ + +  ++  T+R Y A ++ +  + ++ 
Sbjct: 68  ITQSDAAPIKRYEPGHPLADGDGYIYQPDVDPVAQMVNLISTSRNYQAGVEMLTTAKELA 127

Query: 126 TTTLDLLR 133
             TL + R
Sbjct: 128 LATLTMGR 135


>gi|88858145|ref|ZP_01132787.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
 gi|88819762|gb|EAR29575.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
          Length = 140

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 7/129 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           I+ +G++ QS R+   + N++NA +   +       R  +   E+   +   + + +GV 
Sbjct: 9   ISATGMSAQSVRLNTTASNMSNANSVSSSIDQTYRARHPVFAAELTKAAASQQGESVGVK 68

Query: 70  QSTFVE-------EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
               VE       EF+P HP+A+  G +   NVNV+ E A+M   +R Y  N+Q    + 
Sbjct: 69  VLGIVESDKPLQIEFNPTHPMADKDGFIYKSNVNVVEEMANMISASRAYQTNVQLADAAK 128

Query: 123 DMMTTTLDL 131
            M++ T+ L
Sbjct: 129 SMLSKTIML 137


>gi|90408058|ref|ZP_01216229.1| flagellar basal-body rod protein FlgC [Psychromonas sp. CNPT3]
 gi|90310815|gb|EAS38929.1| flagellar basal-body rod protein FlgC [Psychromonas sp. CNPT3]
          Length = 140

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 9/130 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------GSGGVRV 63
           I+ +G++ QS R+   + N+ANA +   +     YR +   F   ++       S GV V
Sbjct: 9   ISATGMSAQSVRLNTTASNLANANSVSSSS-EKTYRARHPVFAAELNKAKGALSSSGVGV 67

Query: 64  KKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           K +G+ +S      E+ P  P A+  G V + NVNV+ E A+M   +R Y  N+Q    +
Sbjct: 68  KVLGIVESDAPLAREYAPNSPSADKDGFVYHSNVNVMEEMANMISASRSYQTNVQIADAA 127

Query: 122 HDMMTTTLDL 131
             M++ TL +
Sbjct: 128 KQMLSRTLQM 137


>gi|238762361|ref|ZP_04623332.1| Flagellar basal-body rod protein FlgC [Yersinia kristensenii ATCC
           33638]
 gi|238699346|gb|EEP92092.1| Flagellar basal-body rod protein FlgC [Yersinia kristensenii ATCC
           33638]
          Length = 141

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 10/132 (7%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------HGSGG 60
            I+ S +  Q+ R+  I+ N+ANA +   +       R  I F  V          G  G
Sbjct: 8   RISGSAMTAQTIRLNTIASNLANADSPAASAAEAYKARSPI-FSAVYSPRSAANPRGVNG 66

Query: 61  VRVKKIGV-DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +V+ + V +    V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  N++ + 
Sbjct: 67  AQVQVLDVVEVRETVQRYEPNHPLANPQGYVFYPAVNVVSEMADMMSASRSFETNVEVLN 126

Query: 120 QSHDMMTTTLDL 131
               M  + L L
Sbjct: 127 SVKSMQQSVLKL 138


>gi|88811799|ref|ZP_01127053.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
 gi|88791190|gb|EAR22303.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
          Length = 139

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 7/130 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GGVRVKK 65
           +A S ++ Q+ R+ I + N+ANA T   TP    Y+ +   F   ++ +      V V+ 
Sbjct: 11  VAGSAMSAQALRLNITASNMANADTVASTP-ERAYKARQPVFAAALNTAHDTVSAVPVQL 69

Query: 66  IGVDQSTFVEE--FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            GV  S+   E  + P +P+A+A G V   NVN +    +M   +R Y  N++ +  S D
Sbjct: 70  RGVVTSSAAAEPLYQPNNPLADADGYVYRSNVNTVEAMVNMISASRSYQNNVEVVSTSRD 129

Query: 124 MMTTTLDLLR 133
           ++  TL L R
Sbjct: 130 LLLQTLRLGR 139


>gi|167626153|ref|YP_001676447.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
 gi|167356175|gb|ABZ78788.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
          Length = 139

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            IA +G+  Q+ R+  ++ N+ANA    ++P  + +R     F  +   +   +V    V
Sbjct: 8   QIAGAGMNAQTIRLNTVASNLANAGAAAESP-DEAFRALKPVFSTIYKQTQEGQVAGAHV 66

Query: 69  DQSTFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           + S  V+        ++P HP A+  G V Y NVN + E ADM   +R +  N++ + ++
Sbjct: 67  EVSAIVQSDAPLDLRYEPDHPYADEQGYVAYSNVNTVEEMADMMAASRSFETNVEIMNRA 126

Query: 122 HDMMTTTLDL 131
             M    L L
Sbjct: 127 RSMQQGLLQL 136


>gi|121596115|ref|YP_988011.1| flagellar basal-body rod protein FlgC [Acidovorax sp. JS42]
 gi|222112270|ref|YP_002554534.1| flagellar basal-body rod protein flgc [Acidovorax ebreus TPSY]
 gi|120608195|gb|ABM43935.1| flagellar basal-body rod protein FlgC [Acidovorax sp. JS42]
 gi|221731714|gb|ACM34534.1| flagellar basal-body rod protein FlgC [Acidovorax ebreus TPSY]
          Length = 134

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKK 65
           +++ S ++ QS R+ +++ N+AN       P    Y+ + + F+    G   + GVRV  
Sbjct: 8   NVSGSAISAQSQRLNVVASNLANVDAVAG-PDGQAYKARQVVFQTAPMGPESAAGVRVSS 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I           DP +P+A+A G V + NVN + E  +M   +R Y  N++ +  +  ++
Sbjct: 67  IQESDQPGRRVHDPANPMADAEGYVTHSNVNAVEEMVNMISASRSYQNNVEVMNTAKTLL 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 LKTLQM 132


>gi|163794627|ref|ZP_02188597.1| putative flagellar basal-body rod protein flgC [alpha
           proteobacterium BAL199]
 gi|159179900|gb|EDP64425.1| putative flagellar basal-body rod protein flgC [alpha
           proteobacterium BAL199]
          Length = 138

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 8/126 (6%)

Query: 13  SGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMH---GSGGVRVKK 65
           SG+     R    + N+AN R+    T D P +D   R        +     +GGVR  +
Sbjct: 12  SGVQAAERRFGNSANNVANLRSQAAPTVDGPATDADGRTLFRAARSVDQTTATGGVRSSQ 71

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           + VD S+ ++ ++P    A+A G+V  PNV+++ ETAD     R   ANL TI+ + +++
Sbjct: 72  LLVDPSS-IQGYEPSAADADADGLVHRPNVDLVRETADQISGQRQLEANLATIRAADELL 130

Query: 126 TTTLDL 131
             TLD+
Sbjct: 131 QATLDI 136


>gi|319764537|ref|YP_004128474.1| flagellar basal-body rod protein flgc [Alicycliphilus denitrificans
           BC]
 gi|330826753|ref|YP_004390056.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
           K601]
 gi|317119098|gb|ADV01587.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
           BC]
 gi|329312125|gb|AEB86540.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
           K601]
          Length = 134

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKK 65
           +++ S ++ QS R+ +++ N+AN       P    Y+ + + F+    G   S GVRV  
Sbjct: 8   NVSGSAISAQSQRLNVVASNLANVDAVAG-PDGQAYKARQVVFQTAPMGPDSSAGVRVST 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I           DP +P+A+A G V + NVN + E  +M   +R Y  N++ +  +  ++
Sbjct: 67  IQESGVPGRRVHDPSNPMADAEGYVTHSNVNAVEEMVNMISASRSYQNNVEVMNTAKSLL 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 LKTLQM 132


>gi|89072317|ref|ZP_01158896.1| flagellar basal body rod protein [Photobacterium sp. SKA34]
 gi|89051849|gb|EAR57301.1| flagellar basal body rod protein [Photobacterium sp. SKA34]
          Length = 144

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 10/132 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPG----------SDPYRRKTISFEEVMHGSG 59
           IA S +  Q+ R+  ++ N+ANA      P           +  Y +  ++ E+  + S 
Sbjct: 9   IAGSAMNAQTIRLNTVASNLANADAVAANPDDAYKALKPVFATVYNKTQLTGEQADYPSA 68

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ + 
Sbjct: 69  EVRIMDVVQHAGDAEKRFEPSNPLANEEGYVYYPDIDVVAEMADMMSATRSFETNVEVLS 128

Query: 120 QSHDMMTTTLDL 131
               M    L L
Sbjct: 129 NVKSMQQGLLRL 140


>gi|224825775|ref|ZP_03698879.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
 gi|224601999|gb|EEG08178.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
          Length = 140

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------G 59
           + IA S +  Q+ R+  ++ N+ANA +   + G+  +R +   F  V  G+         
Sbjct: 7   SRIAGSAMTAQTVRLNTVASNLANAESASGSEGA-AFRARKPVFATVYRGADSDGAWQGA 65

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            V+V  +    S   +  +P +P+A+A G V YPNVN + E  DM   +R +  N++ + 
Sbjct: 66  SVQVLDVVKSDSPLRKVHEPSNPLADADGNVFYPNVNPVEEMTDMMSASRAFQTNVEVLA 125

Query: 120 QSHDMMTTTLDL 131
           +   M    L L
Sbjct: 126 RVKTMQQDLLKL 137


>gi|257866376|ref|ZP_05646029.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC30]
 gi|257871287|ref|ZP_05650940.1| flagellar basal body rod protein FlgC [Enterococcus gallinarum EG2]
 gi|257873108|ref|ZP_05652761.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC10]
 gi|257875989|ref|ZP_05655642.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC20]
 gi|257800334|gb|EEV29362.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC30]
 gi|257805451|gb|EEV34273.1| flagellar basal body rod protein FlgC [Enterococcus gallinarum EG2]
 gi|257807272|gb|EEV36094.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC10]
 gi|257810155|gb|EEV38975.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC20]
          Length = 138

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 9/128 (7%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GVRVKK 65
           SGLA++  ++  IS NIAN  T   T  +  Y++K+I F E +  S        GV+V  
Sbjct: 12  SGLALERLKLDTISSNIANVNT-NQTQTTAAYQKKSILFSENLKNSREGTPATYGVKVTG 70

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  D++  +  +DP +P AN  G V   NV++  E   M +  R Y AN+   + +  ++
Sbjct: 71  IAADETEKLT-YDPTNPAANDEGYVGQSNVDIADEMVAMLQAVRTYEANVSASEMNKTIL 129

Query: 126 TTTLDLLR 133
              L++ +
Sbjct: 130 KKALEISK 137


>gi|330447901|ref|ZP_08311549.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492092|dbj|GAA06046.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 144

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 10/132 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPG----------SDPYRRKTISFEEVMHGSG 59
           IA S +  Q+ R+  ++ N+ANA      P           +  Y +  ++ E+  + S 
Sbjct: 9   IAGSAMNAQTIRLNTVASNLANADAVAANPDDAYQALKPVFATVYGKTQLTGEQANYPSA 68

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ + 
Sbjct: 69  EVRIMDVVQHAGEAEKRFEPSNPLANEEGYVYYPDIDVVAEMADMMSATRSFETNVEVLS 128

Query: 120 QSHDMMTTTLDL 131
               M    L L
Sbjct: 129 NVKSMQQGLLRL 140


>gi|28900120|ref|NP_799775.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153837089|ref|ZP_01989756.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|260365770|ref|ZP_05778266.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|260880692|ref|ZP_05893047.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|260897702|ref|ZP_05906198.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|260899387|ref|ZP_05907782.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|1272366|gb|AAA97474.1| LfgC [Vibrio parahaemolyticus]
 gi|28808403|dbj|BAC61608.1| LfgC [Vibrio parahaemolyticus RIMD 2210633]
 gi|149749677|gb|EDM60422.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|308086219|gb|EFO35914.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|308092577|gb|EFO42272.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|308109204|gb|EFO46744.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|308114992|gb|EFO52532.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|328470099|gb|EGF41010.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus
           10329]
          Length = 144

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 10/132 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPG----------SDPYRRKTISFEEVMHGSG 59
           I  S +  Q+ R+  ++ N+ANA      P           +  Y++  ++ E  ++ + 
Sbjct: 9   ITGSAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKTQMTTENGIYPNA 68

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            VR+  +  ++    + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ + 
Sbjct: 69  EVRIVDVVQNKGQAEKRFEPNNPLANGEGYVYYPDIDVVAEMADMMSATRSFETNVEVLA 128

Query: 120 QSHDMMTTTLDL 131
               M    L L
Sbjct: 129 NVKSMQQGLLRL 140


>gi|238752868|ref|ZP_04614333.1| Flagellar basal-body rod protein FlgC [Yersinia rohdei ATCC 43380]
 gi|238708907|gb|EEQ01160.1| Flagellar basal-body rod protein FlgC [Yersinia rohdei ATCC 43380]
          Length = 141

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 12/133 (9%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-------- 60
            I+ S +  Q+ R+  I+ N+ANA +   +  +  Y+ ++  F  V              
Sbjct: 8   RISGSAMTAQTIRLNTIASNLANAESPAASEATV-YKARSPVFSAVYSPRSAAAPGGVGG 66

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+V  + V+    V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  N++ +
Sbjct: 67  AQVQVLDV-VETGGSVQRYEPNHPLANPQGYVFYPQVNVVSEMADMMSASRSFETNVEVL 125

Query: 119 KQSHDMMTTTLDL 131
                M  + L L
Sbjct: 126 NSVKSMQQSVLRL 138


>gi|212637783|ref|YP_002314308.1| flagellar basal-body rod protein FlgC [Shewanella piezotolerans
           WP3]
 gi|212559267|gb|ACJ31721.1| Flagellar basal-body rod protein FlgC [Shewanella piezotolerans
           WP3]
          Length = 139

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            IA +G+  Q+ R+  ++ N+ANA    ++P    +R     F  +   +   +V    V
Sbjct: 8   QIAGAGMNAQTIRLNTVASNLANAGAAAESP-DQAFRALKPVFSTIYKQTQEGQVAGAHV 66

Query: 69  DQSTFVE-------EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           + S  VE        ++P HP A+  G V Y NVN + E ADM   +R +  +++ + ++
Sbjct: 67  EVSAIVETDAPLDLRYEPDHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSVEVMNRA 126

Query: 122 HDMMTTTLDL 131
             M    L L
Sbjct: 127 RSMQQGLLQL 136


>gi|83646783|ref|YP_435218.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
           2396]
 gi|83634826|gb|ABC30793.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
           2396]
          Length = 133

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 14/138 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MDYL     I+ SGL  Q  R+Q ++ N+AN  +T    G+    +  ++        G 
Sbjct: 1   MDYLQVF-DISGSGLDFQKLRLQAVATNLANVYSTSSKAGAA--FKPLMAVATAEQSGGS 57

Query: 61  VRVKKIGVDQSTFVE-------EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
           +R    GV     VE       ++DP HP ANA G V+ P +N + E   M    R Y A
Sbjct: 58  LR----GVGDMQLVERDVEPRLKYDPAHPHANADGYVEMPAINPVDEMTSMMLATRAYEA 113

Query: 114 NLQTIKQSHDMMTTTLDL 131
           N+  +  +  M    L++
Sbjct: 114 NVSVLSAAKTMALKALEI 131


>gi|254227981|ref|ZP_04921411.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
 gi|151939477|gb|EDN58305.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
          Length = 144

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 10/132 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPG----------SDPYRRKTISFEEVMHGSG 59
           I  S +  Q+ R+  ++ N+ANA      P           +  Y++  ++ E  ++ + 
Sbjct: 9   ITGSAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKAQLTTENGVYPNA 68

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            VR+  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ + 
Sbjct: 69  EVRIVDVVKNAGEAEKRFEPNNPLANGEGYVYYPDIDVVAEMADMMSATRSFETNVEVLS 128

Query: 120 QSHDMMTTTLDL 131
               M    L L
Sbjct: 129 NVKSMQQGLLRL 140


>gi|260767921|ref|ZP_05876855.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|260615951|gb|EEX41136.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|315179624|gb|ADT86538.1| flagellar basal-body rod protein FlgC [Vibrio furnissii NCTC 11218]
          Length = 144

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 12/133 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-----------MHGS 58
           IA S +  Q+ R+  ++ N+ANA      P  D YR     F  V           ++ S
Sbjct: 9   IAGSAMTAQTVRLNTVASNLANADAVSANP-DDAYRALKPVFATVYNKSQLATGDNVYPS 67

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VR+  +        + F+P +P+A+  G V YP+++V+ E ADM    R +  N++ +
Sbjct: 68  AEVRIVDVVQSAGQAEKRFEPHNPLADGDGYVYYPDIDVVAEMADMMSATRSFETNVEVL 127

Query: 119 KQSHDMMTTTLDL 131
                M    L L
Sbjct: 128 SNVKSMQQGLLKL 140


>gi|300936123|ref|ZP_07151062.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
 gi|300458701|gb|EFK22194.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
          Length = 143

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 12/134 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S  V   +  +
Sbjct: 8   QISGSAMTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHHSLLVGTHRHAI 66

Query: 69  DQSTF-----------VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           D ++            V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +  N+  
Sbjct: 67  DGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVDV 126

Query: 118 IKQSHDMMTTTLDL 131
           +     M  + L L
Sbjct: 127 LNNVKSMQQSLLKL 140


>gi|90577342|ref|ZP_01233153.1| flagellar basal body rod protein [Vibrio angustum S14]
 gi|90440428|gb|EAS65608.1| flagellar basal body rod protein [Vibrio angustum S14]
          Length = 144

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 10/132 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPG----------SDPYRRKTISFEEVMHGSG 59
           IA S +  Q+ R+  ++ N+ANA      P           +  Y +  ++ ++  + S 
Sbjct: 9   IAGSAMNAQTIRLNTVASNLANADAVAANPNDAYKALKPVFATVYNKTQLTGDQADYPSA 68

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ + 
Sbjct: 69  EVRIMDVVQHAGEAEKRFEPSNPLANEEGYVYYPDIDVVAEMADMMSATRSFETNVEVLS 128

Query: 120 QSHDMMTTTLDL 131
               M    L L
Sbjct: 129 NVKSMQQGLLRL 140


>gi|83815671|ref|YP_446718.1| flagellar basal-body rod protein FlgC [Salinibacter ruber DSM
           13855]
 gi|294508653|ref|YP_003572712.1| flagellar basal-body rod protein flgC [Salinibacter ruber M8]
 gi|83757065|gb|ABC45178.1| flagellar basal-body rod protein FlgC [Salinibacter ruber DSM
           13855]
 gi|294344982|emb|CBH25760.1| Flagellar basal-body rod protein flgC [Salinibacter ruber M8]
          Length = 166

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 34/161 (21%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-------TISFEEVMH 56
            + +   A  GL  Q  ++   +EN+ANA +T  T   DP+R K          +E +  
Sbjct: 7   FLPAMKTAARGLEAQRRKLGAATENLANA-STSRTEDGDPFRIKRAVQEVDNADYERLNR 65

Query: 57  G------------SGGVRVKKIGVDQST--------------FVEEFDPGHPVANASGIV 90
           G            +  +R   +  +Q+T                 E+DP HP A+  G V
Sbjct: 66  GGLDPQLELRSTNARHLREASLPPEQATGNLGPETEIEEIEKERLEYDPSHPHADEEGYV 125

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            YP+VNV  E A M   NR+Y ANL  ++ +  M   T ++
Sbjct: 126 HYPDVNVAQEMARMTSANRVYEANLSAVEATKSMAQRTFEI 166


>gi|323492340|ref|ZP_08097493.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
 gi|323313387|gb|EGA66498.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
          Length = 144

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 10/132 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPG----------SDPYRRKTISFEEVMHGSG 59
           IA S +  Q+ R+  ++ N+ANA      P           +  Y +  ++  E  + + 
Sbjct: 9   IAGSAMNAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYNKTQLTASEGAYPNA 68

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            VR+  +   +    + F+P +P+AN  G V YP+V+V+ E ADM    R +  N++ + 
Sbjct: 69  EVRIVDVVQSEGKAEKRFEPSNPLANDEGYVYYPDVDVVSEMADMMSATRSFETNVEVLT 128

Query: 120 QSHDMMTTTLDL 131
               M    L L
Sbjct: 129 NVKSMQQGLLKL 140


>gi|329898291|ref|ZP_08272374.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC3088]
 gi|328920856|gb|EGG28299.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC3088]
          Length = 141

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 10/133 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---------SGG 60
           IA S LA Q+ R+   + N+ANA     T   D Y+ K + F  V+           +G 
Sbjct: 9   IAGSALAGQTTRLHATASNMANASNVSST-AEDAYKAKRVVFRTVLEDQIIGNVRRPAGS 67

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           + V  +  D S   + +DP +P+A+  G V   NV  + E  +M    R Y  N++ I  
Sbjct: 68  LLVDGVKDDPSPHRKLYDPSNPLADEDGYVYQSNVEEVEEVVEMLAAARSYQNNVEVINT 127

Query: 121 SHDMMTTTLDLLR 133
           +  +MT TL++L+
Sbjct: 128 AKQLMTRTLEVLK 140


>gi|167725928|ref|ZP_02409164.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           DM98]
 gi|167905088|ref|ZP_02492293.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           NCTC 13177]
          Length = 125

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 8/124 (6%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-----GVRVKKIGVD 69
           ++ Q+ R+  I+ N+ANA +   T  +  YR +   F  +          G  V+ + V 
Sbjct: 1   MSAQTVRLNTIASNLANADSASGTEDAT-YRARKPVFASIFQLDAQGEPRGAAVQVLDVV 59

Query: 70  QST--FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           +ST    +   PGHP+A+A G V YPNVN + E  DM   +R Y  N++ + + + M   
Sbjct: 60  KSTEPLRKVHQPGHPLADAEGNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNGMQLE 119

Query: 128 TLDL 131
            L L
Sbjct: 120 LLKL 123


>gi|254499115|ref|ZP_05111805.1| flagellar basal-body rod protein FlgC [Legionella drancourtii
           LLAP12]
 gi|254351654|gb|EET10499.1| flagellar basal-body rod protein FlgC [Legionella drancourtii
           LLAP12]
          Length = 140

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 16/133 (12%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI----SFEEVMHGSGGVRVKK 65
           IA+ G+  +  R+ +++ NIAN  +     GS     + +    SF E++      + ++
Sbjct: 9   IASQGMNAEKLRVDVVANNIANQHSLQKADGSLFQASQVVTTAKSFAELVD-----KPQE 63

Query: 66  IGVDQSTFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           +G+D    V E       + PGHP A+  G V YP V+ + E   +   +R Y AN++ I
Sbjct: 64  MGIDSVEVVPENLPPSKVYQPGHPAADKQGYVNYPGVSTIDEMTTLLRASRAYEANIKII 123

Query: 119 KQSHDMMTTTLDL 131
             +H +    L +
Sbjct: 124 NSAHSLYLQALSI 136


>gi|149189834|ref|ZP_01868114.1| flagellar basal body rod protein [Vibrio shilonii AK1]
 gi|148836320|gb|EDL53277.1| flagellar basal body rod protein [Vibrio shilonii AK1]
          Length = 144

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 12/133 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-----------MHGS 58
           IA S +  Q+ R+  ++ N+ANA      P  D Y+     F  V           ++ +
Sbjct: 9   IAGSAMTAQTVRLNTVASNLANADAVSANP-DDAYKALKPVFATVYSQTQLAAGQNVYPN 67

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VR+  +    +   + F+P +P+AN  G V YP V+V+ E ADM    R +  N++ +
Sbjct: 68  AEVRIVDVVQSDAKADQRFEPNNPLANEEGYVYYPGVDVVAEMADMMSATRSFETNVEVL 127

Query: 119 KQSHDMMTTTLDL 131
                M    L L
Sbjct: 128 ANVKSMQQGLLRL 140


>gi|283782090|ref|YP_003372845.1| flagellar basal-body rod protein FlgC [Pirellula staleyi DSM 6068]
 gi|283440543|gb|ADB18985.1| flagellar basal-body rod protein FlgC [Pirellula staleyi DSM 6068]
          Length = 141

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 59/134 (44%), Gaps = 11/134 (8%)

Query: 10  IANSGLAVQSARMQIISENIANARTTG-DTPGS-DPYRRKTISFEE-----VMHGSGGVR 62
           I+ S L  Q  R+  IS N+AN  +   D  G   PY  K + FE        HG+ GV+
Sbjct: 7   ISTSALVAQRIRLDTISSNLANMTSLERDASGEMKPYEGKYVRFEADPELATRHGAVGVK 66

Query: 63  VKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           V  I  +    +  + P HP A       G V YP +N   E  D     R Y AN+  +
Sbjct: 67  VSSIETETVEPLYRWQPDHPYAIKEGPRKGYVAYPRINQTAEFVDALVATRAYEANVGVM 126

Query: 119 KQSHDMMTTTLDLL 132
           + + +M   TL +L
Sbjct: 127 EITKNMSQQTLRIL 140


>gi|15639388|ref|NP_218837.1| flagellar basal body rod protein FlgC [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025630|ref|YP_001933402.1| flagellar basal body rod protein FlgC [Treponema pallidum subsp.
           pallidum SS14]
 gi|3322680|gb|AAC65385.1| flagellar basal-body rod protein (flgC) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018205|gb|ACD70823.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
          Length = 129

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 21/130 (16%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISF---------------EEVMHGSG-GVRVKKIG 67
           +IS+NIANA +T    G   +RR  +                 E++  G G GVRV  I 
Sbjct: 1   MISDNIANASSTRTQEGGV-FRRSRVVLAQKNPGIDWRIPFVPEQLDRGVGTGVRVVSIE 59

Query: 68  VDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            D +     +DP HP A  SG     V+YPNV+++ E  D+   +R Y AN+  I  S +
Sbjct: 60  KDNAPSRLVYDPTHPDAILSGPKAGYVEYPNVDIVTEMVDLISASRAYEANISVISGSKE 119

Query: 124 MMTTTLDLLR 133
           M    L++ R
Sbjct: 120 MFQRALEIAR 129


>gi|256020226|ref|ZP_05434091.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
 gi|300817272|ref|ZP_07097490.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|307313521|ref|ZP_07593142.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|332281388|ref|ZP_08393801.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
 gi|300530248|gb|EFK51310.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|306906689|gb|EFN37200.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|315059540|gb|ADT73867.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli W]
 gi|323379901|gb|ADX52169.1| flagellar basal-body rod protein FlgC [Escherichia coli KO11]
 gi|332103740|gb|EGJ07086.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
          Length = 143

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 12/134 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S      +  +
Sbjct: 8   QISGSAMTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHHSLLAGTHRHAI 66

Query: 69  DQSTF-----------VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           D ++            V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +  N+  
Sbjct: 67  DSASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVDV 126

Query: 118 IKQSHDMMTTTLDL 131
           +     M  + L L
Sbjct: 127 LNNVKSMQQSLLKL 140


>gi|283784083|ref|YP_003363948.1| lateral flagellar basal-body rod protein [Citrobacter rodentium
           ICC168]
 gi|282947537|emb|CBG87089.1| lateral flagellar basal-body rod protein [Citrobacter rodentium
           ICC168]
          Length = 143

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 12/133 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----------HGSG 59
           I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V           H   
Sbjct: 9   ISGSAMTAQTIRLNTVASNLANAEAPASSE-AQAYKARSPVFAAVYNNSLTGAHHRHAID 67

Query: 60  GVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           G  V+   V QS   V+ ++P HP+A+ +G V YP+VNV+ + ADM   +R +  N+  +
Sbjct: 68  GASVQVQDVLQSGGAVKRYEPHHPMADNNGYVWYPDVNVVEQMADMMSASRDFETNVDVL 127

Query: 119 KQSHDMMTTTLDL 131
                M  + L L
Sbjct: 128 NNVKSMQQSLLKL 140


>gi|323191536|gb|EFZ76797.1| flagellar basal-body rod protein FlgC [Escherichia coli RN587/1]
          Length = 143

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 12/134 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S      +  +
Sbjct: 8   QISGSAMTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHNSLLAGTHRHAI 66

Query: 69  DQSTF-----------VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           D ++            V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +  N+  
Sbjct: 67  DGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVDV 126

Query: 118 IKQSHDMMTTTLDL 131
           +     M  + L L
Sbjct: 127 LNNVKSMQQSLLKL 140


>gi|167614835|ref|ZP_02383470.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           Bt4]
          Length = 125

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 8/124 (6%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-----GVRVKKIGVD 69
           ++ Q+ R+  I+ N+ANA        S  YR +   F  +          G  V+ + V 
Sbjct: 1   MSAQTVRLNTIASNLANADAASGAEDST-YRARKPVFASIFQLDAQGEPRGAAVQVLDVV 59

Query: 70  QST--FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           +ST    +   PGHP+A+A G V YPNVN + E  DM   +R Y  N++ + + + M   
Sbjct: 60  KSTEPLRKVHQPGHPLADAEGNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNSMQLE 119

Query: 128 TLDL 131
            L L
Sbjct: 120 LLKL 123


>gi|27904802|ref|NP_777928.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|46395818|sp|Q89AH9|FLGC_BUCBP RecName: Full=Flagellar basal-body rod protein flgC
 gi|27904200|gb|AAO27033.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 136

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGS-DPY--RRKTISFEEVMHGS-GGVRVK 64
           +I+ S L  QS +M + ++N+AN+ +     G+  PY  R   + F+ +   + GGV++ 
Sbjct: 8   NISGSALETQSKKMDVHAKNLANSDSYIYKNGTLYPYVARIPMLQFDPISENNVGGVKMH 67

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D S+    ++P  P+A+++G  K  NV+++ ET +    ++ Y  NL+ +  + +M
Sbjct: 68  TVAGDTSSLKSIYNPNSPIADSNGYSKVSNVDIMSETINAITASKNYQTNLEILNTTKNM 127

Query: 125 MTTTLDL 131
           +  TL +
Sbjct: 128 IMKTLTI 134


>gi|317121813|ref|YP_004101816.1| flagellar basal-body rod protein FlgC [Thermaerobacter marianensis
           DSM 12885]
 gi|315591793|gb|ADU51089.1| flagellar basal-body rod protein FlgC [Thermaerobacter marianensis
           DSM 12885]
          Length = 179

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 65/169 (38%), Gaps = 46/169 (27%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-------KTISFEEVMH----GS 58
           IA SG+  Q  R+ +I+ N+AN  TT    G  PYRR       +   F EV+     G 
Sbjct: 11  IAASGMTAQRLRLDLIASNLANVDTTRTAQGG-PYRRLVPVFQERVRPFAEVLRERAAGF 69

Query: 59  GGVRVKKIGV----------------------------------DQSTFVEEFDPGHPVA 84
           GG+     GV                                  D S     +DPGHP A
Sbjct: 70  GGMSGSAGGVSGAAGWQTGGPAGGAGPALGGPALAGVQVAAVVADPSPPRLVYDPGHPDA 129

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              G V YPNV+ L+E  ++    R Y AN+     +  +    L++ R
Sbjct: 130 GPDGYVAYPNVDPLMEMVNLLAATRAYEANVAVFSAARTLALRALEIGR 178


>gi|301646811|ref|ZP_07246663.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|307136856|ref|ZP_07496212.1| flagellar basal body rod protein FlgC [Escherichia coli H736]
 gi|331640711|ref|ZP_08341858.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
 gi|301075004|gb|EFK89810.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|315616829|gb|EFU97446.1| flagellar basal-body rod protein FlgC [Escherichia coli 3431]
 gi|331040085|gb|EGI12293.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
          Length = 143

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 12/134 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S      +  +
Sbjct: 8   QISGSAMTAQTIRLNTVASNLANAEAPAGSE-AQAYKARSPVFAAVYHHSLLAGTHRHAI 66

Query: 69  DQSTF-----------VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           D ++            V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +  N+  
Sbjct: 67  DAASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVDV 126

Query: 118 IKQSHDMMTTTLDL 131
           +     M  + L L
Sbjct: 127 LNNVKSMQQSLLKL 140


>gi|258622486|ref|ZP_05717508.1| Flagellar basal-body rod protein C [Vibrio mimicus VM573]
 gi|262173352|ref|ZP_06041029.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
 gi|258585186|gb|EEW09913.1| Flagellar basal-body rod protein C [Vibrio mimicus VM573]
 gi|261890710|gb|EEY36697.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
          Length = 144

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 14/134 (10%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDP------------YRRKTISFEEVMHG 57
           IA S +  Q+ R+  ++ N+ANA     +  SD             Y +  ++  +  + 
Sbjct: 9   IAGSAMTAQTVRLNTVASNLANADAV--SANSDDAYKALKPVFATVYNKTQMAASDSAYP 66

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           S  VRV  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ 
Sbjct: 67  SAEVRVMDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVVAEMADMMSATRSFETNVEV 126

Query: 118 IKQSHDMMTTTLDL 131
           +     M    L L
Sbjct: 127 LSNVKSMQQGLLKL 140


>gi|258625236|ref|ZP_05720148.1| Flagellar basal-body rod protein C [Vibrio mimicus VM603]
 gi|258582483|gb|EEW07320.1| Flagellar basal-body rod protein C [Vibrio mimicus VM603]
          Length = 144

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 14/134 (10%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDP------------YRRKTISFEEVMHG 57
           IA S +  Q+ R+  ++ N+ANA     +  SD             Y +  ++  +  + 
Sbjct: 9   IAGSAMTAQTVRLNTVASNLANADAV--SANSDDAYKALKPVFATVYNKTQMAASDSAYP 66

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           S  VRV  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ 
Sbjct: 67  SAEVRVMDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVVAEMADMMSATRSFETNVEM 126

Query: 118 IKQSHDMMTTTLDL 131
           +     M    L L
Sbjct: 127 LSNVKSMQQGLLKL 140


>gi|170021362|ref|YP_001726316.1| flagellar basal body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|170683008|ref|YP_001742371.1| flagellar basal body rod protein FlgC [Escherichia coli SMS-3-5]
 gi|188492955|ref|ZP_03000225.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|260853464|ref|YP_003227355.1| putative lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|260866411|ref|YP_003232813.1| putative lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|331645416|ref|ZP_08346520.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331666544|ref|ZP_08367418.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331671802|ref|ZP_08372598.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
 gi|169756290|gb|ACA78989.1| flagellar basal-body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|170520726|gb|ACB18904.1| lateral flagellar basal-body rod protein LfgC [Escherichia coli
           SMS-3-5]
 gi|188488154|gb|EDU63257.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|257752113|dbj|BAI23615.1| predicted lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|257762767|dbj|BAI34262.1| predicted lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|323158105|gb|EFZ44204.1| flagellar basal-body rod protein FlgC [Escherichia coli EPECa14]
 gi|323171061|gb|EFZ56710.1| flagellar basal-body rod protein FlgC [Escherichia coli LT-68]
 gi|323181545|gb|EFZ66965.1| flagellar basal-body rod protein FlgC [Escherichia coli 1357]
 gi|331045578|gb|EGI17704.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331065768|gb|EGI37652.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331070791|gb|EGI42150.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
          Length = 143

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 12/134 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S      +  +
Sbjct: 8   QISGSAMTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHHSLLAGTHRHAI 66

Query: 69  DQSTF-----------VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           D ++            V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +  N+  
Sbjct: 67  DGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVDV 126

Query: 118 IKQSHDMMTTTLDL 131
           +     M  + L L
Sbjct: 127 LNNVKSMQQSLLKL 140


>gi|94495413|ref|ZP_01301993.1| flagellar cell-proximal portion protein [Sphingomonas sp. SKA58]
 gi|94424801|gb|EAT09822.1| flagellar cell-proximal portion protein [Sphingomonas sp. SKA58]
          Length = 138

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 7/124 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGS--DPYRRKTISFEEVMHGSG--GVRVKK 65
           IA   ++ Q  R+   + N+ANA   G+  GS  D YR     F  V    G   V+V  
Sbjct: 14  IAGRAMSAQLVRLNTTASNMANA---GNVTGSAQDAYRAIKPVFTSVTDSPGVSTVKVSD 70

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +   ++   +  DP HP+A+A+G V    V+   E  DM ET R+Y  N+Q +  +  +M
Sbjct: 71  VVTTKAEPTKRHDPNHPLADANGDVWEAAVDSNAELVDMIETARMYQNNVQVLNTAKSLM 130

Query: 126 TTTL 129
             T+
Sbjct: 131 LETI 134


>gi|283834457|ref|ZP_06354198.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
 gi|291070004|gb|EFE08113.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
          Length = 143

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 12/134 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----------HGS 58
            I+ S +  Q+ R+  ++ N+ANA +   +  +  Y+ ++  F  V           H  
Sbjct: 8   QISGSAMTAQTIRLNTVASNMANAESPASSE-AQAYKARSPVFAAVYNNSLIGGHNRHAI 66

Query: 59  GGVRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            G  V+   V QS   V+ ++P HP+A+ +G V YP+VNV+ + ADM   +R +  ++  
Sbjct: 67  DGASVQVQDVMQSGGAVKRYEPHHPMADQNGFVWYPDVNVVEQMADMMSASRDFETDVDV 126

Query: 118 IKQSHDMMTTTLDL 131
           +     M  + L L
Sbjct: 127 LNNVKSMQQSLLKL 140


>gi|254496885|ref|ZP_05109733.1| flagellar basal body rod protein FlgC [Legionella drancourtii
           LLAP12]
 gi|254353904|gb|EET12591.1| flagellar basal body rod protein FlgC [Legionella drancourtii
           LLAP12]
          Length = 140

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 12/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVMHGS---------G 59
           IA S L  ++AR+   + N++NA   +G+    D YR K   F+ V   +          
Sbjct: 9   IAGSALTAETARLTTSASNMSNANVESGNV--DDVYRVKYPIFKTVQENATQWMGDQINA 66

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV++K   V  +  ++ + P +P A+A G +  PNVN + E A++   +R Y  N++ + 
Sbjct: 67  GVQLKGTYVSTADPIKHYQPNNPQADAKGFIYTPNVNYVDEMANVISASRSYQMNIELVN 126

Query: 120 QSHDMMTTTLDL 131
            +  ++  TL L
Sbjct: 127 NAKQLIQRTLQL 138


>gi|195952550|ref|YP_002120840.1| flagellar basal-body rod protein FlgC [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932162|gb|ACG56862.1| flagellar basal-body rod protein FlgC [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 136

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 7/126 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV----MHGSGGVRVKK 65
           ++ SG+  +  RM  I+ N+AN  +   T G+ PY++    F+ V    M   G V V  
Sbjct: 10  VSASGMYAERIRMNTIASNLANYESY-KTDGT-PYQKLEPVFQAVYDRNMLSDGLVPVNV 67

Query: 66  IGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
             + QS  F   +DP +P AN  G V+ PN+NV  E  DM    + Y ANL     + ++
Sbjct: 68  SEIRQSNGFKLIYDPSNPHANTQGYVEEPNINVTTEMVDMITATQSYQANLSAFNMTKNI 127

Query: 125 MTTTLD 130
              T++
Sbjct: 128 AQFTIN 133


>gi|327254552|gb|EGE66168.1| flagellar basal-body rod protein FlgC [Escherichia coli STEC_7v]
          Length = 143

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 12/134 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S      +  +
Sbjct: 8   QISGSAMTAQTLRLNTVASNLANANAPAGSE-AQAYKARSPVFAAVYHHSLLAGTHRHAI 66

Query: 69  DQSTF-----------VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           D ++            V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +  N+  
Sbjct: 67  DGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVDV 126

Query: 118 IKQSHDMMTTTLDL 131
           +     M  + L L
Sbjct: 127 LNNVKSMQQSLLKL 140


>gi|218703523|ref|YP_002411042.1| flagellar basal body rod protein FlgC [Escherichia coli UMN026]
 gi|293403353|ref|ZP_06647444.1| flgC [Escherichia coli FVEC1412]
 gi|298378965|ref|ZP_06988846.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|300900363|ref|ZP_07118538.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
 gi|218430620|emb|CAR11486.1| putative Flagellar basal-body rod protein flgC ( proximal rod
           protein) [Escherichia coli UMN026]
 gi|291429206|gb|EFF02226.1| flgC [Escherichia coli FVEC1412]
 gi|298280078|gb|EFI21582.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|300356119|gb|EFJ71989.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
          Length = 143

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 12/134 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S      +  +
Sbjct: 8   QISGSAMTAQTIRLNTVASNLANANAPAGSE-AQAYKARSPVFAAVYHHSLLAGTHRHAI 66

Query: 69  DQSTF-----------VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           D ++            V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +  N+  
Sbjct: 67  DGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVDV 126

Query: 118 IKQSHDMMTTTLDL 131
           +     M  + L L
Sbjct: 127 LNNVKSMQQSLLKL 140


>gi|306813306|ref|ZP_07447499.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
 gi|305854069|gb|EFM54508.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
          Length = 143

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 14/135 (10%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---------- 58
            I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S          
Sbjct: 8   QISGSAMTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHHSLLSGTHRHAI 66

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V+ + +     V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +  N+ 
Sbjct: 67  DGASVQVQDV-LQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVD 125

Query: 117 TIKQSHDMMTTTLDL 131
            +     M  + L L
Sbjct: 126 VLNNVKSMQQSLLKL 140


>gi|153831731|ref|ZP_01984398.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|156976139|ref|YP_001447045.1| flagellar basal body rod protein FlgC [Vibrio harveyi ATCC
           BAA-1116]
 gi|269960114|ref|ZP_06174490.1| Flagellar basal-body rod protein C [Vibrio harveyi 1DA3]
 gi|148872241|gb|EDL71058.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|156527733|gb|ABU72818.1| hypothetical protein VIBHAR_04910 [Vibrio harveyi ATCC BAA-1116]
 gi|269835085|gb|EEZ89168.1| Flagellar basal-body rod protein C [Vibrio harveyi 1DA3]
          Length = 144

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 10/132 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPG----------SDPYRRKTISFEEVMHGSG 59
           I  S +  Q+ R+  ++ N+ANA      P           +  Y++  ++ E  ++ + 
Sbjct: 9   ITGSAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKTQMATENGVYPNA 68

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            VR+  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ + 
Sbjct: 69  EVRIVDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVVSEMADMMSATRSFETNVEVLT 128

Query: 120 QSHDMMTTTLDL 131
               M    L L
Sbjct: 129 NVKSMQQGLLRL 140


>gi|157959904|ref|YP_001499938.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
           700345]
 gi|157844904|gb|ABV85403.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
           700345]
          Length = 139

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            IA +G+  Q+ R+  ++ N+ANA    ++P    +R     F  +   +    +    V
Sbjct: 8   QIAGAGMNAQTIRLNTVASNLANAGAAAESP-DQAFRALKPVFSTIYKQTQEGELAGAHV 66

Query: 69  DQSTFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           + S  V+        ++P HP A+  G V Y NVN + E ADM   +R +  +++ + ++
Sbjct: 67  EVSAIVQSDAPLDLRYEPNHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSVEVMNRA 126

Query: 122 HDMMTTTLDL 131
             M    L L
Sbjct: 127 RSMQQGLLQL 136


>gi|84514835|ref|ZP_01002198.1| flagellar basal-body rod protein FlgC [Loktanella vestfoldensis
           SKA53]
 gi|84510994|gb|EAQ07448.1| flagellar basal-body rod protein FlgC [Loktanella vestfoldensis
           SKA53]
          Length = 139

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 7/128 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------GGVRV 63
           IA   +A Q  R+  ++ NIANA T   +     +R     F+    G         V V
Sbjct: 10  IAGRSMAAQMVRLNTVASNIANANTRSGS-AEQTFRPLRPVFQTAFEGGIRNAERATVDV 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           K+I           +PGHP+A+  G V  P V++  E  DM E +R Y  NL+ +     
Sbjct: 69  KEIVALDREAQRVHEPGHPLADEEGFVYMPPVDMNEELVDMLEASRQYQNNLEVLTTMRT 128

Query: 124 MMTTTLDL 131
           +M  T+D+
Sbjct: 129 LMLRTVDM 136


>gi|152965614|ref|YP_001361398.1| hypothetical protein Krad_1648 [Kineococcus radiotolerans SRS30216]
 gi|151360131|gb|ABS03134.1| protein of unknown function DUF1078 domain protein [Kineococcus
           radiotolerans SRS30216]
          Length = 131

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 6/124 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI--G 67
           IA +G+ V    M  +S+N+AN  T   T   D +  + +   E   G G  +V  I  G
Sbjct: 9   IAGTGVTVNRKWMDAVSDNLANINTATRTD-EDAFAARYVVAAEAADGKG-TQVAGIVTG 66

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
             +   V E  P +P+A+ +G VKYP++++  +   +    R Y ANLQTI  + +  + 
Sbjct: 67  STEGRMVHE--PDNPLADENGYVKYPDIDMSSQMTSLMMAQRAYQANLQTITSAKEAYSA 124

Query: 128 TLDL 131
            L L
Sbjct: 125 ALQL 128


>gi|293408365|ref|ZP_06652204.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
 gi|291471543|gb|EFF14026.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
          Length = 143

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 14/135 (10%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---------- 58
            I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S          
Sbjct: 8   QISGSAMTAQTLRLNTVASNLANAEAPAGSE-AQAYKARSPVFAAVYHHSLLAGTHRHAM 66

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V+ + +     V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +  N+ 
Sbjct: 67  DGASVQVQDV-LQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVD 125

Query: 117 TIKQSHDMMTTTLDL 131
            +     M  + L L
Sbjct: 126 VLNNVKSMQQSLLKL 140


>gi|56460254|ref|YP_155535.1| flagellar basal body rod protein [Idiomarina loihiensis L2TR]
 gi|56179264|gb|AAV81986.1| Flagellar basal body rod protein [Idiomarina loihiensis L2TR]
          Length = 150

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 20/142 (14%)

Query: 9   HIANSGLAVQSARMQIISENIANART-----------------TGDTPGSDPYRRKTISF 51
           ++  S ++ QS R+   + N+ANA +                 T     S  Y+  +++ 
Sbjct: 8   NVTGSAMSAQSVRLNTTASNLANANSISSSIDETYRARNPVFATALADASGNYKGNSLTN 67

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           +       GV+V  I   Q     E+ P HP+A+ SG +  PNVN + E A+M   +R Y
Sbjct: 68  QTQAGQEAGVKVMGIVESQDPLQIEYAPNHPMADESGYIYRPNVNTMEEMANMISASRSY 127

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N+Q    +  M   T  LLR
Sbjct: 128 QTNVQVADTAKTM---TQRLLR 146


>gi|332994164|gb|AEF04219.1| flagellar basal-body rod protein FlgC [Alteromonas sp. SN2]
          Length = 140

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           I+++G+  ++ R+   + NIANA +   +   + YR +   F   +  + G + K +GV+
Sbjct: 9   ISSTGMEAENVRLNTTASNIANANSVSSS-YDETYRARHPVFAAELQRAMGDQSKGVGVE 67

Query: 70  QSTFVE-------EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
               VE       E+ P +P+A+  G +  PNVN++ E A+M   ++ Y  N+Q    + 
Sbjct: 68  VKGIVESDAPLQVEYAPHNPMADEEGYIYKPNVNIVEEMANMMSASKAYETNVQVADTTK 127

Query: 123 DMMTTTLDL 131
            +    L L
Sbjct: 128 RIFRRVLQL 136


>gi|260779349|ref|ZP_05888241.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605513|gb|EEX31808.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 144

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPG----------SDPYRRKTISFEEVMHGSG 59
           IA S +  Q+ R+  ++ N+ANA      P           +  Y +  +S  +  + + 
Sbjct: 9   IAGSAMNAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYSKTQLSASKESYPNA 68

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ + 
Sbjct: 69  EVRIVDVVQSAGQAEKRFEPSNPLANDEGYVYYPDIDVVSEMADMMSATRSFETNVEVLS 128

Query: 120 QSHDMMTTTLDL 131
               M    L L
Sbjct: 129 NVKSMQQGLLRL 140


>gi|206603156|gb|EDZ39636.1| Flagellar basal-body rod protein FlgC [Leptospirillum sp. Group II
           '5-way CG']
          Length = 145

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 13/134 (9%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVMHGSGG 60
            IA  G+  +  RM ++S N+AN+++    P     RR  I        SF +V+     
Sbjct: 8   RIAAGGMEAERVRMNVLSGNLANSQSVHGNPRGVFERRDVIFAAVRPGHSFFDVLRSPRE 67

Query: 61  VRVKKIGV-----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             VK++ V     D       +DPG P A+ SG V  PNV+ L E  ++ + +R Y +NL
Sbjct: 68  SPVKEVRVMGMVRDPRPLNRVYDPGSPDADRSGYVLRPNVSKLEEMVNLLDASRAYESNL 127

Query: 116 QTIKQSHDMMTTTL 129
             +  +  M    L
Sbjct: 128 TALDDTKQMARKDL 141


>gi|323975932|gb|EGB71026.1| flagellar basal-body rod protein FlgC [Escherichia coli TW10509]
          Length = 143

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 12/134 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S      +  +
Sbjct: 8   QISGSAMTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHHSLLAGTHRHAI 66

Query: 69  DQSTF-----------VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           D ++            ++ ++P  P+A+A+G V YP+VNV+ + ADM   +R +  N+  
Sbjct: 67  DGASVQVQDVLQTGGALKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVDV 126

Query: 118 IKQSHDMMTTTLDL 131
           +     M  + L L
Sbjct: 127 LNNVKSMQQSLLKL 140


>gi|21242729|ref|NP_642311.1| flagellar basal body rod protein FlgC [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|294625272|ref|ZP_06703911.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|294664589|ref|ZP_06729930.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|21108205|gb|AAM36847.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas axonopodis pv. citri str. 306]
 gi|268589170|gb|ACZ06861.1| flagella basal body rod protein [Xanthomonas axonopodis pv.
           glycines]
 gi|292600446|gb|EFF44544.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292605646|gb|EFF48956.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 135

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGV 61
           +A S L  QS R+  I+ N+ANA +     GS     K I  E +              V
Sbjct: 9   VAGSALHAQSVRLSTIASNLANADSVA---GSAEATYKPI--EPIFQAQQSRQDPSLTSV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ +  +
Sbjct: 64  NVKEITTTNAPPIRRYEPGHPLADAEGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTA 123

Query: 122 HDMMTTTLDLLR 133
            ++   TL + R
Sbjct: 124 KELALATLTMGR 135


>gi|289666045|ref|ZP_06487626.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 135

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGV 61
           +A S L  QS R+  I+ N+ANA +     GS     K I  E +              V
Sbjct: 9   VAGSALHAQSVRLSTIASNLANADSVA---GSAEATYKPI--EPIFQAQQSRRDPSLTSV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ +  +
Sbjct: 64  NVKEITTTNAPPIRRYEPGHPLADAEGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTA 123

Query: 122 HDMMTTTLDLLR 133
            ++   TL + R
Sbjct: 124 KELALATLTMGR 135


>gi|262396037|ref|YP_003287890.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
 gi|262339631|gb|ACY53425.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
          Length = 131

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 10/127 (7%)

Query: 15  LAVQSARMQIISENIANARTTGDTPG----------SDPYRRKTISFEEVMHGSGGVRVK 64
           +  Q+ R+  ++ N+ANA      P           +  Y++  ++ E  ++ +  VR+ 
Sbjct: 1   MTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKAQLTTENGVYPNAEVRIV 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ +     M
Sbjct: 61  DVVKNAGEAEKRFEPNNPLANGEGYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSM 120

Query: 125 MTTTLDL 131
               L L
Sbjct: 121 QQGLLRL 127


>gi|78047588|ref|YP_363763.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|84624086|ref|YP_451458.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|166712064|ref|ZP_02243271.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzicola BLS256]
 gi|188576754|ref|YP_001913683.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188576945|ref|YP_001913874.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|325927873|ref|ZP_08189097.1| flagellar basal-body rod protein FlgC [Xanthomonas perforans
           91-118]
 gi|78036018|emb|CAJ23709.1| flagellar basal body rod protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|84368026|dbj|BAE69184.1| flagellar biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188521206|gb|ACD59151.1| flagellar basal-body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521397|gb|ACD59342.1| flagellar basal-body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|325541713|gb|EGD13231.1| flagellar basal-body rod protein FlgC [Xanthomonas perforans
           91-118]
          Length = 135

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGV 61
           +A S L  QS R+  I+ N+ANA +     GS     K I  E +              V
Sbjct: 9   VAGSALHAQSVRLSTIASNLANADSVA---GSAEATYKPI--EPIFQAQQSRQDPSLTSV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ +  +
Sbjct: 64  NVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTA 123

Query: 122 HDMMTTTLDLLR 133
            ++   TL + R
Sbjct: 124 KELALATLTMGR 135


>gi|27378285|ref|NP_769814.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351432|dbj|BAC48439.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 149

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 20/143 (13%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSD-----------------PYRRKTISF 51
            IA SGL+  S R+ + + NIAN  TTG  P S                  P     +  
Sbjct: 5   SIATSGLSAASLRVSVAASNIANISTTGPLPASGGSSTSAGAGSSGIGPTFPAAYVPLRV 64

Query: 52  EEVMHGSG---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
           ++V   SG   G  V  +     +++ + DP  P AN  G+V  PNV++  E  ++    
Sbjct: 65  DQVSQSSGSTPGGSVATVSAVSPSYIAQSDPSAPFANEDGLVAAPNVDLAGEFVELVTAK 124

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
             ++AN + I+   +   + LD+
Sbjct: 125 YSFIANAKVIQAYAETTESLLDI 147


>gi|332669188|ref|YP_004452196.1| flagellar basal-body rod protein FlgC [Cellulomonas fimi ATCC 484]
 gi|332338226|gb|AEE44809.1| flagellar basal-body rod protein FlgC [Cellulomonas fimi ATCC 484]
          Length = 132

 Score = 53.9 bits (128), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI--G 67
           IA++GL V    +  +S+N++N  T   T   + +R K +   E    + GV+V  I  G
Sbjct: 9   IASTGLTVHRKWLDAVSDNLSNLSTVRPTS-EEAFRAKYVVAAESAGENQGVQVAGIVEG 67

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
             +   V  ++PGHP+A+  G V+YP++++  +   +    R Y AN   + ++ +    
Sbjct: 68  SAEGRLV--YEPGHPLADEDGYVRYPDIDMSSQMTQLMMAQRGYQANAAVVDRARETYNA 125

Query: 128 TLDLLR 133
            L + R
Sbjct: 126 ALQIGR 131


>gi|188991643|ref|YP_001903653.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733403|emb|CAP51604.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 135

 Score = 53.9 bits (128), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGV 61
           +A S L  QS R+  I+ N+ANA +     GS     K I  E +              V
Sbjct: 9   VAGSALHAQSVRLSTIASNLANADSVA---GSAEATYKPI--EPIFQAQQNRQDPSLTSV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ +  +
Sbjct: 64  NVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTA 123

Query: 122 HDMMTTTLDLLR 133
            ++   TL + R
Sbjct: 124 KELALATLTMGR 135


>gi|163803167|ref|ZP_02197050.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
 gi|159173067|gb|EDP57900.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
          Length = 144

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 12/133 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-----MHGSGGV--- 61
           I  S +  Q+ R+  ++ N+ANA      P  D Y+     F  V     M    GV   
Sbjct: 9   ITGSAMTAQTVRLNTVASNLANADAVSANP-DDAYKALKPVFATVYQKTQMTTDNGVYPN 67

Query: 62  -RVKKIGVDQSTFVEE--FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+ + V QS    E  F+P +P+AN  G V YP+++V+ E ADM    R +  N++ +
Sbjct: 68  AEVRIVDVVQSAGQAEQRFEPNNPLANNQGYVYYPDIDVVSEMADMMSATRSFETNVEVL 127

Query: 119 KQSHDMMTTTLDL 131
                M    L L
Sbjct: 128 TNVKSMQQGLLRL 140


>gi|91224201|ref|ZP_01259464.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
 gi|91191112|gb|EAS77378.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
          Length = 144

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 10/132 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPG----------SDPYRRKTISFEEVMHGSG 59
           I  S +  Q+ R+  ++ N+ANA      P           +  Y++  ++ E   + + 
Sbjct: 9   ITGSAMTAQTVRLNTVASNLANADAVSANPEDAYKALKPVFATVYQKTQMTTENGAYPNA 68

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            VR+  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ + 
Sbjct: 69  EVRIVDVVKNAGDAEKRFEPNNPLANDEGYVFYPDIDVVAEMADMMSATRSFETNVEVLA 128

Query: 120 QSHDMMTTTLDL 131
               M    L L
Sbjct: 129 NVKSMQQGLLRL 140


>gi|289670504|ref|ZP_06491579.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 135

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGV 61
           +A S L   S R+  I+ N+ANA +     GS     K I  E +              V
Sbjct: 9   VAGSALHAHSVRLSTIASNLANADSVA---GSAEATYKPI--EPIFQAQQSRRDPSLTSV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M  T+R Y A ++ +  +
Sbjct: 64  NVKEITTTNAPPIRRYEPGHPLADAEGYVFSPDVDPVSQMVNMISTSRNYQAGVEMLNTA 123

Query: 122 HDMMTTTLDLLR 133
            ++   TL + R
Sbjct: 124 KELALATLTMGR 135


>gi|239995127|ref|ZP_04715651.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii ATCC
           27126]
          Length = 140

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------GGV 61
            I+++G+  ++ R+   + NIANA +   +   + YR +   F   +  +        GV
Sbjct: 8   QISSTGMEAENVRLNTTASNIANANSVSSS-YDETYRARHPVFATALQDAMRDQSKGAGV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +VK I    +    E+ P +P+A+ +G +  PNVN++ E A+M   ++ Y  N+Q    +
Sbjct: 67  QVKGIVESDAPLQMEYSPNNPMADENGYIYKPNVNIVEEMANMMSASKAYETNVQVADTT 126

Query: 122 HDMMTTTLDL 131
             +    L L
Sbjct: 127 KRIFRRVLQL 136


>gi|21231399|ref|NP_637316.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768548|ref|YP_243310.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21113065|gb|AAM41240.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66573880|gb|AAY49290.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. 8004]
          Length = 135

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGV 61
           +A S L  QS R+  I+ N+ANA +     GS     K I  E +              V
Sbjct: 9   VAGSALHAQSVRLSTIASNLANADSIA---GSAEATYKPI--EPIFQAQQNRQDPSLTSV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ +  +
Sbjct: 64  NVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTA 123

Query: 122 HDMMTTTLDLLR 133
            ++   TL + R
Sbjct: 124 KELALATLTMGR 135


>gi|332140544|ref|YP_004426282.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550566|gb|AEA97284.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 140

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 8/130 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------GGV 61
            I+++G+  ++ R+   + NIANA +   +   + YR +   F   +  +        GV
Sbjct: 8   QISSTGMEAENVRLNTTASNIANANSVSSS-YDETYRARHPVFATALQDAMRDQSKGAGV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +VK I    +    E+ P +P+A+ +G +  PNVN++ E A+M   ++ Y  N+Q    +
Sbjct: 67  QVKGIVESDAPLQVEYSPNNPMADENGYIYKPNVNIVEEMANMMSASKAYETNVQVADTT 126

Query: 122 HDMMTTTLDL 131
             +    L L
Sbjct: 127 KRIFRRVLQL 136


>gi|220913734|ref|YP_002489043.1| flagellar basal-body rod protein FlgC [Arthrobacter
           chlorophenolicus A6]
 gi|219860612|gb|ACL40954.1| flagellar basal-body rod protein FlgC [Arthrobacter
           chlorophenolicus A6]
          Length = 130

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 4/123 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVRVKKIGV 68
           IA + L V    +  +S+N+AN      T G + +R + I   E   G+G  VR    G 
Sbjct: 8   IAGTALTVHRKWLDAVSDNLANMNNAARTDG-EAFRARYIEAAEGTDGTGVYVRSTPEGD 66

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            +   V  + P HP+A+A G V+YP++++  +   +    R Y AN Q + ++ +     
Sbjct: 67  AEGRMV--YQPDHPLADAEGYVRYPDIDLAEQMGALIVAQRGYQANAQVVDRARETYLAA 124

Query: 129 LDL 131
           L++
Sbjct: 125 LEI 127


>gi|327478807|gb|AEA82117.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri DSM
           4166]
          Length = 142

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 11/133 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--------GSGG 60
            IA S +  Q+ R+  ++ N+AN  +    P +D Y+ +   F  V          G GG
Sbjct: 8   RIAGSSMNAQTVRLNTVASNLANTDSAAANP-ADVYQARKPMFAAVYENNSLTRGVGLGG 66

Query: 61  VRVKKIGVDQSTF--VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+ + V  S       ++PG+P+A+  G V YP++N + E  DM    R +   ++ +
Sbjct: 67  AHVQVLDVVTSGAEPKRRYEPGNPLADGEGYVYYPDINEIEEMTDMMSATRSFETGVEVL 126

Query: 119 KQSHDMMTTTLDL 131
            +   M  + L L
Sbjct: 127 NRVKSMQQSLLRL 139


>gi|325918875|ref|ZP_08180952.1| flagellar basal-body rod protein FlgC [Xanthomonas vesicatoria ATCC
           35937]
 gi|325534912|gb|EGD06831.1| flagellar basal-body rod protein FlgC [Xanthomonas vesicatoria ATCC
           35937]
          Length = 135

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGV 61
           +A S L  QS R+  I+ N+ANA +     GS     K I  E +              V
Sbjct: 9   VAGSALHAQSVRLSTIASNLANADSVA---GSVEATYKPI--EPIFQAQQSRQDPSLTSV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ +  +
Sbjct: 64  NVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTA 123

Query: 122 HDMMTTTLDLLR 133
            ++   TL + R
Sbjct: 124 KELALATLTMGR 135


>gi|58582193|ref|YP_201209.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|58426787|gb|AAW75824.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 127

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGV 61
           +A S L  QS R+  I+ N+ANA +     GS     K I  E +              V
Sbjct: 1   MAGSALHAQSVRLSTIASNLANADSVA---GSAEATYKPI--EPIFQAQQSRQDPSLTSV 55

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ +  +
Sbjct: 56  NVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTA 115

Query: 122 HDMMTTTLDLLR 133
            ++   TL + R
Sbjct: 116 KELALATLTMGR 127


>gi|312884836|ref|ZP_07744528.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367488|gb|EFP95048.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 145

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 12/133 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-----------RKTISFEEVMHGS 58
           IA S +  QS R+  ++ N+ANA         D Y+           +  +S  +  + +
Sbjct: 9   IAGSAMNAQSVRLNTVASNLANADAVS-ANADDAYKALKPVFATVYNKTQLSVSDNAYPN 67

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R +  N+  +
Sbjct: 68  AEVRIVDVVQSSKQAEKRFEPSNPLANDEGYVYYPDIDVVAEMADMMSATRSFETNVAVL 127

Query: 119 KQSHDMMTTTLDL 131
                M    L L
Sbjct: 128 GNVKSMQQGLLKL 140


>gi|294013084|ref|YP_003546544.1| flagellar basal-body rod protein FlgC [Sphingobium japonicum UT26S]
 gi|292676414|dbj|BAI97932.1| flagellar basal-body rod protein FlgC [Sphingobium japonicum UT26S]
          Length = 138

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 7/126 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGS--DPYRRKTISFEEVMHGSG--GVRVKK 65
           IA   ++ Q  R+   + N+ANA   G+  GS  + YR     F+ V    G   V+V+ 
Sbjct: 14  IAGRAMSAQLVRLNATASNMANA---GNVTGSAAEAYRAIKPVFQSVTDSPGVSTVKVQN 70

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +    +   +  DP HP+A+ +G V    V+   E  DM ET R+Y  N+Q +  +  +M
Sbjct: 71  VVTTNAQPTKRHDPNHPLADKNGDVWEAAVDSSAELVDMIETARMYQNNVQVLNTAKSLM 130

Query: 126 TTTLDL 131
             T+ +
Sbjct: 131 METIRI 136


>gi|124516313|gb|EAY57821.1| Flagellar basal-body rod protein FlgC [Leptospirillum rubarum]
          Length = 145

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 13/134 (9%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVMHGSGG 60
            IA  G+  +  RM +++ N+AN+++    P     RR  I        SF +V+     
Sbjct: 8   RIAAGGMEAERVRMNVLAGNLANSQSVHGNPRGVFERRDVIFAAVRPGHSFFDVLRSPRE 67

Query: 61  VRVKKIGV-----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             VK++ V     D       +DPG P A+ SG V  PNV+ L E  ++ + +R Y +NL
Sbjct: 68  SPVKEVRVMGMVRDPRPLNRVYDPGSPDADRSGYVLRPNVSKLEEMVNLLDASRAYESNL 127

Query: 116 QTIKQSHDMMTTTL 129
             +  +  M    L
Sbjct: 128 TALDDTKQMARKDL 141


>gi|325921022|ref|ZP_08182904.1| flagellar basal-body rod protein FlgC [Xanthomonas gardneri ATCC
           19865]
 gi|325548504|gb|EGD19476.1| flagellar basal-body rod protein FlgC [Xanthomonas gardneri ATCC
           19865]
          Length = 135

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGV 61
           +A S L  QS R+  I+ N+ANA +     GS     K I  E +              V
Sbjct: 9   VAGSALHAQSVRLSTIASNLANADSVA---GSAEATYKPI--EPIFQARQNRQDPSLTSV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ +  +
Sbjct: 64  NVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVAQMVNMISASRNYQAGVEMLNTA 123

Query: 122 HDMMTTTLDLLR 133
            ++   T+ + R
Sbjct: 124 KELALATITMGR 135


>gi|307293789|ref|ZP_07573633.1| flagellar basal-body rod protein FlgC [Sphingobium chlorophenolicum
           L-1]
 gi|306879940|gb|EFN11157.1| flagellar basal-body rod protein FlgC [Sphingobium chlorophenolicum
           L-1]
          Length = 136

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 7/126 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGS--DPYRRKTISFEEVMHGSG--GVRVKK 65
           IA   ++ Q  R+   + N+ANA   G+  GS  + YR     F+ V    G   V+V+ 
Sbjct: 12  IAGRAMSAQLVRLNATASNMANA---GNVTGSAAEAYRAIKPVFQSVTDSPGVSTVKVQN 68

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +    +   +  DP HP+A+ +G V    V+   E  DM ET R+Y  N+Q +  +  +M
Sbjct: 69  VVTTNAQPTKRHDPNHPLADKNGDVWEAAVDSSAELVDMIETARMYQNNVQVLNTAKSLM 128

Query: 126 TTTLDL 131
             T+ +
Sbjct: 129 METIRI 134


>gi|54307268|ref|YP_128288.1| FlgC flagellar basal-body rod protein [Photobacterium profundum
           SS9]
 gi|46911688|emb|CAG18486.1| Hypothetical FlgC flagellar basal-body rod protein [Photobacterium
           profundum SS9]
          Length = 138

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 11/130 (8%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDP--YRRKTISFEEVM----HGSGGVRV 63
           IA S ++ Q+ R+  ++ N+ANA       GSD   Y  K   F  VM        G +V
Sbjct: 9   IAGSAMSAQTIRLNTVASNLANADVVS---GSDKTGYHAKRPVFSTVMIDMDSPVPGAKV 65

Query: 64  KKIGVDQST--FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +   V +ST      ++P HP AN  G V +  VNV+ E ADM   +R +  N+  + ++
Sbjct: 66  QIDDVIESTEPLRRRYEPNHPKANNEGYVFHSTVNVVEEMADMMAASRNFETNVNVMSRA 125

Query: 122 HDMMTTTLDL 131
             M  + L L
Sbjct: 126 RSMQQSILRL 135


>gi|262166284|ref|ZP_06034021.1| flagellar basal-body rod protein FlgC [Vibrio mimicus VM223]
 gi|262026000|gb|EEY44668.1| flagellar basal-body rod protein FlgC [Vibrio mimicus VM223]
          Length = 71

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 34/59 (57%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V EF+P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S  M+  TL +
Sbjct: 11  LVAEFNPEHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQM 69


>gi|315125982|ref|YP_004067985.1| LfgC [Pseudoalteromonas sp. SM9913]
 gi|315014496|gb|ADT67834.1| LfgC [Pseudoalteromonas sp. SM9913]
          Length = 138

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 8/126 (6%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-----SGGVRVKKIG 67
           S +  Q  R+  I+ N+ANA T   +  +D Y+     F  +        S    V  +G
Sbjct: 12  SAMRAQVIRLDTIASNLANADTAAGSE-ADAYKALKPVFSALYKQTQDSQSISASVDVLG 70

Query: 68  VDQSTFVEE--FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           + +S    E  ++P +P+AN  G V Y NVN L E ADM   +R Y  +++ + + + M 
Sbjct: 71  ITESNRAVEQRYEPNNPIANNDGYVFYSNVNALEEMADMMSASRSYQTSVEVMGRVNSMQ 130

Query: 126 TTTLDL 131
            + L L
Sbjct: 131 QSILKL 136


>gi|269965642|ref|ZP_06179755.1| Flagellar basal-body rod protein C [Vibrio alginolyticus 40B]
 gi|269829710|gb|EEZ83946.1| Flagellar basal-body rod protein C [Vibrio alginolyticus 40B]
          Length = 138

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 10/119 (8%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPG----------SDPYRRKTISFEEVMHGSG 59
           I  S +  Q+ R+  ++ N+ANA      P           +  Y++  ++ E   + + 
Sbjct: 9   ITGSAMTAQTVRLNTVASNLANADAVSANPEDAYKALKPVFATVYQKTQMTTENGAYPNA 68

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            VR+  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ +
Sbjct: 69  EVRIVDVVKNAGDAEKRFEPNNPLANDEGYVFYPDIDVVAEMADMMSATRSFETNVEVL 127


>gi|323178496|gb|EFZ64074.1| flagellar basal-body rod protein FlgC [Escherichia coli 1180]
          Length = 130

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF- 73
           +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S      +  +D ++  
Sbjct: 1   MTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHHSLLAGTHRHAIDGASVQ 59

Query: 74  ----------VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                     V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +  N+  +     
Sbjct: 60  VQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVDVLNNVKS 119

Query: 124 MMTTTLDL 131
           M  + L L
Sbjct: 120 MQQSLLKL 127


>gi|148980304|ref|ZP_01815991.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
 gi|145961323|gb|EDK26633.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
          Length = 142

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 11/133 (8%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV-- 68
           A S ++ Q+ R+  IS N+ANA +    P S  Y+     F  V +     + ++ GV  
Sbjct: 10  AGSAMSAQTVRLNTISSNLANADSVSGDP-SQVYKPLKPIFSAVYNHFNAQQTQQQGVVP 68

Query: 69  -------DQSTFVE-EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                  + S+ +E  ++P +P++N  G V Y  +NV+ E ADM    R + A+++ +  
Sbjct: 69  IRIADVVEVSSMMEGRYEPNNPLSNDEGYVYYSGINVVNEMADMISATRSFEASVEVLGN 128

Query: 121 SHDMMTTTLDLLR 133
              M  + + L R
Sbjct: 129 VKSMQQSLMGLWR 141


>gi|149191151|ref|ZP_01869409.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
 gi|148834989|gb|EDL51968.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
          Length = 142

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 13/134 (9%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---------EEVMH-GSGG 60
           A S ++ Q+ R+  IS N+ANA +    P S  Y+     F         +E  H G   
Sbjct: 10  AGSAMSAQTVRLNTISSNLANADSVSGDP-SKVYKPLKPIFSAVYNHFNAQETQHQGVVP 68

Query: 61  VRVKKIGVDQSTFVE-EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           +R+  + V+ S+ +E  ++P +P++N  G V Y  +NV+ E ADM    R + A+++ + 
Sbjct: 69  IRIADV-VEVSSMMEGRYEPNNPLSNDEGYVYYSGINVVNEMADMISATRSFEASVEVLG 127

Query: 120 QSHDMMTTTLDLLR 133
               M  + + L R
Sbjct: 128 NVKSMQQSLMGLWR 141


>gi|91975157|ref|YP_567816.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris BisB5]
 gi|91681613|gb|ABE37915.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris BisB5]
          Length = 136

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 8/130 (6%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSD-------PYRRKTISFEEVMHGSGG 60
           A IA SG+   + R+++ + N+AN ++TG  P ++       P   + +   +     GG
Sbjct: 5   ASIAVSGMNAATRRLEVSASNVANQQSTGALPAANGAVPAGAPQAYRPLQVNQTAVAGGG 64

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
            +       Q   V   DP  P AN  G V  PNV++  E          Y ANL ++K 
Sbjct: 65  TQTTVSATSQGA-VAISDPQAPFANQDGQVAAPNVDLAQEFIGQLVARYSYTANLASLKA 123

Query: 121 SHDMMTTTLD 130
             DM    LD
Sbjct: 124 DRDMSKALLD 133


>gi|269965426|ref|ZP_06179545.1| Flagellar basal-body rod protein flgC [Vibrio alginolyticus 40B]
 gi|269829905|gb|EEZ84135.1| Flagellar basal-body rod protein flgC [Vibrio alginolyticus 40B]
          Length = 70

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S  M+  TL +
Sbjct: 13  EYNPDHPLANEEGYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQM 68


>gi|117928047|ref|YP_872598.1| hypothetical protein Acel_0839 [Acidothermus cellulolyticus 11B]
 gi|117648510|gb|ABK52612.1| protein of unknown function DUF1078 domain protein [Acidothermus
           cellulolyticus 11B]
          Length = 130

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 3/131 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L  +  I+ + L V    M  I++N++NA      PG  P         +   G GG
Sbjct: 1   MTQLFDTIGISGTALTVNRKWMDAIADNVSNANDV--VPGDQPVFAPRYVQVQAAPG-GG 57

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V  I    S  +E +DP +P A+A G V++ +V++  +   M    R Y ANL  + +
Sbjct: 58  VEVVAIRYGSSAGIESYDPTNPQADARGYVRHADVDMTSQMTQMIMAQRSYEANLAIMTR 117

Query: 121 SHDMMTTTLDL 131
           + D     L L
Sbjct: 118 ATDAYKQALQL 128


>gi|89902475|ref|YP_524946.1| flagellar basal-body rod protein FlgC [Rhodoferax ferrireducens
           T118]
 gi|89347212|gb|ABD71415.1| flagellar basal-body rod protein FlgC [Rhodoferax ferrireducens
           T118]
          Length = 134

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 4/126 (3%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           +++ S ++ QS R+ +++ N+ANA      P    Y+ + + FE V  GS      ++  
Sbjct: 8   NVSGSAISAQSQRLNVVASNLANADAVAG-PDGQGYKGRQVVFETVPMGSDASSGVRVSS 66

Query: 69  DQST---FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
              +     +  +P HP A+A G V   NVN + E  +M   +R Y  N++ +  +  ++
Sbjct: 67  VSESNEPLRKVHNPSHPSADADGYVTQSNVNPIEEMVNMISASRSYQNNVEVMNTAKTLL 126

Query: 126 TTTLDL 131
             TL +
Sbjct: 127 LKTLQM 132


>gi|254463002|ref|ZP_05076418.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
           HTCC2083]
 gi|206679591|gb|EDZ44078.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 139

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 7/128 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYR--RKTIS--FEEVMHGS--GGVRV 63
           IA   +A Q  R+  ++ NIANA     +   D YR  R      FE+ M  +    V V
Sbjct: 10  IAGRSMAAQMVRLNTVASNIANAEARAGS-AEDAYRPLRPVFQTVFEDGMRNAERASVEV 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           + +       +   +PGHP+A+  G V    V+V  E  DM E +R Y  NL+ +     
Sbjct: 69  RDVIALDREPLRVHEPGHPLADEEGYVYIAPVDVNEEMVDMIEASRQYQNNLEVVTTMRT 128

Query: 124 MMTTTLDL 131
           +M  T+++
Sbjct: 129 LMMRTVNM 136


>gi|114320055|ref|YP_741738.1| flagellar basal-body rod protein FlgC [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226449|gb|ABI56248.1| flagellar basal-body rod protein FlgC [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 151

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 20/141 (14%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------------HG 57
           ++ SG+  Q  R+  ++ N+AN+ T   +P    YR +   F  V+            + 
Sbjct: 9   VSGSGMNAQQTRLNTVASNLANSETVAGSP-EQAYRSRQPVFASVLQAAQQGQAAGNPNH 67

Query: 58  SGGVRVKKIGVDQSTFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
            G  R   +GV     V+        + P HP A+  G V   NVN + E  +M   +R 
Sbjct: 68  PGDARGTNVGVKVEDIVQSDAPVQPLYMPNHPQADEQGYVYRSNVNPVEEMTNMISASRS 127

Query: 111 YMANLQTIKQSHDMMTTTLDL 131
           Y  N++ +  S +++  TL L
Sbjct: 128 YQNNVEVMNTSKELLLQTLRL 148


>gi|103488385|ref|YP_617946.1| flagellar basal-body rod protein FlgC [Sphingopyxis alaskensis
           RB2256]
 gi|98978462|gb|ABF54613.1| flagellar basal-body rod protein FlgC [Sphingopyxis alaskensis
           RB2256]
          Length = 267

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 10  IANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVM--HGSGGVRVKKI 66
           I+   ++ Q  R+   + N+ANA T  G   G+  +R     F  VM  HG   V++ +I
Sbjct: 143 ISGRAMSAQLVRLNTTASNLANAGTVAGSEAGA--FRSLKPVFRTVMDDHGRATVQIDQI 200

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              +    +  DP +P+A+A G V    V+   E  +M ET R Y  N+Q ++ +  ++ 
Sbjct: 201 TTSKMAPSKRHDPSNPLADADGNVWEAAVDSAAELVEMVETARQYQNNVQVLETAKGLIN 260

Query: 127 TTLDL 131
            TL +
Sbjct: 261 ETLRM 265


>gi|85712252|ref|ZP_01043303.1| Flagellar basal body rod protein [Idiomarina baltica OS145]
 gi|85693879|gb|EAQ31826.1| Flagellar basal body rod protein [Idiomarina baltica OS145]
          Length = 150

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 22/143 (15%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HG---- 57
           +I+ S ++ QS R+   + N+ANA +   +   + YR ++  F   +       HG    
Sbjct: 8   NISGSAMSAQSVRLNTTASNLANANSVSSSI-DETYRARSPIFAAALSDASGKYHGTELT 66

Query: 58  -------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                  S GV+V  +         E+ P HP+A+ +G +   NVN + E A+M   +R 
Sbjct: 67  NQTQAGQSAGVKVLGVVESDKPLQIEYAPNHPMADKNGYIYRSNVNTMEEMANMISASRS 126

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y  N+Q    +  M   T  LLR
Sbjct: 127 YQTNVQVADTAKTM---TQRLLR 146


>gi|149908761|ref|ZP_01897422.1| LfgC [Moritella sp. PE36]
 gi|149808303|gb|EDM68242.1| LfgC [Moritella sp. PE36]
          Length = 140

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 9/131 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------GVR 62
            IA SG+  Q+ R+  ++ N+AN  +   +     +  K I F  +   S       G  
Sbjct: 8   EIAGSGMRSQTLRLNTVASNLANVNSAASSEKEAYHALKPI-FSTIYQTSQETLEVTGAS 66

Query: 63  VKKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V  +GV   Q      ++P + +AN  G V Y NVN + E ADM   +R + ++ + +++
Sbjct: 67  VNMLGVTRSQQAIERRYEPENTLANNDGYVFYSNVNAVAEMADMMSASRSFESSAEVMRR 126

Query: 121 SHDMMTTTLDL 131
            + M  + L L
Sbjct: 127 VNSMQQSLLRL 137


>gi|91791420|ref|YP_561071.1| putative flagellar basal body rod protein FlgC [Shewanella
           denitrificans OS217]
 gi|91713422|gb|ABE53348.1| putative flagellar basal body rod protein FlgC [Shewanella
           denitrificans OS217]
          Length = 127

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 7/123 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVMHGSGGVRVKKIGV 68
           +A +G+A +  R++  S NIA A     T    +P     +S EE+  G+    VK  G 
Sbjct: 9   VAQTGMAFERNRIEAASLNIARANVVSSTAAQVEPLFMAALSGEELQPGN----VKLTGY 64

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            +S  +  + P HP+A+  G +  P++++  E   +    R Y AN++      +M    
Sbjct: 65  MKSKAI--YQPAHPLADKQGFIYMPDIDLAHEMVTLSSAKRAYEANIKVYNSYKEMSAKA 122

Query: 129 LDL 131
           L++
Sbjct: 123 LEI 125


>gi|167948872|ref|ZP_02535946.1| Flagellar basal-body rod protein FlgC [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 124

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 7/123 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----GSGGVRVKKIGV-- 68
           ++ QS R+ +++ N+AN      +   + YR +   F  ++      +  V V  +GV  
Sbjct: 1   MSAQSLRLNLVASNMANVDAVSSS-IDETYRARQPVFRAMVDQFNPDAPAVGVSMVGVIE 59

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            Q+  + E+ P H +A+ +G +  PNVN + E A+M   +R Y  N++    +  ++  T
Sbjct: 60  SQAPLIREYAPDHQMADEAGYIFRPNVNPVEEMANMISASRSYQGNVEVASAAKQLLMAT 119

Query: 129 LDL 131
           L +
Sbjct: 120 LRM 122


>gi|307823529|ref|ZP_07653758.1| flagellar basal-body rod protein FlgC [Methylobacter tundripaludum
           SV96]
 gi|307735514|gb|EFO06362.1| flagellar basal-body rod protein FlgC [Methylobacter tundripaludum
           SV96]
          Length = 138

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 8/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSGGV-RVK 64
           IA SG+  QS R+ +++ NI+NA +   +  +D Y+ +   F    ++V++      +V 
Sbjct: 9   IAGSGMNAQSLRLNLVASNISNANSVSSS-AADVYKSRQPVFAAELDKVINKQNATSKVN 67

Query: 65  KIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +GV   Q   V E+ P HP+AN+ G +   NVN + E A+M   +R Y  N+  +  + 
Sbjct: 68  VLGVVEGQDAPVMEYAPNHPMANSDGYIFKSNVNTVEEMANMMSASRSYQNNVDVLNTAK 127

Query: 123 DMMTTTLDL 131
            MM  TL +
Sbjct: 128 QMMLQTLKM 136


>gi|227876737|ref|ZP_03994846.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243]
 gi|269976264|ref|ZP_06183260.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris 28-1]
 gi|306817684|ref|ZP_07451426.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris ATCC
           35239]
 gi|307699910|ref|ZP_07636961.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris
           FB024-16]
 gi|227842634|gb|EEJ52834.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243]
 gi|269935593|gb|EEZ92131.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris 28-1]
 gi|304649498|gb|EFM46781.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris ATCC
           35239]
 gi|307614948|gb|EFN94166.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris
           FB024-16]
          Length = 132

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 2/125 (1%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-SGGVRVKKIGV 68
           IA +G+ V    +  IS+NIAN  TT      + +R + +  + V +G   G  V  I +
Sbjct: 9   IAGTGMTVNRKWLDCISDNIANINTT-KPMNEEAFRARYVVAQAVDYGRPAGTMVAGIAL 67

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             +     +DP  P ANA G V++P++++  + + +    R Y AN   + ++     + 
Sbjct: 68  GGTDGRIVYDPKDPNANAEGYVRHPDIDLGSQMSQLIMAQRAYQANAAVVDRAKATYESA 127

Query: 129 LDLLR 133
           L + R
Sbjct: 128 LQIGR 132


>gi|239907806|ref|YP_002954547.1| putative flagellar basal-body rod protein [Desulfovibrio magneticus
           RS-1]
 gi|239797672|dbj|BAH76661.1| putative flagellar basal-body rod protein [Desulfovibrio magneticus
           RS-1]
          Length = 128

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 14/127 (11%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD- 69
           A S L+  S  M + + N+AN  T G       Y+ +    E    G G VRV  I  D 
Sbjct: 8   AQSALSAFSTSMAVTANNVANVNTDG-------YKSQDARLETGPDGQG-VRVSDIVRDA 59

Query: 70  -----QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                Q   V  ++       ++G+V+  NV++  +T DM +T+R + AN+ TI+    M
Sbjct: 60  SPGGYQPESVSAYNQAGVYEPSAGLVETSNVDLARQTVDMIQTSRAFEANVVTIRSQDQM 119

Query: 125 MTTTLDL 131
           + T LD+
Sbjct: 120 LGTLLDM 126


>gi|86747251|ref|YP_483747.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris HaA2]
 gi|86570279|gb|ABD04836.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris HaA2]
          Length = 136

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 8/128 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSD-------PYRRKTISFEEVMHGSGGVR 62
           IA SGL   + R+++ + N+AN ++TG  P ++       P     +   +      G +
Sbjct: 7   IAVSGLKAATRRLEVSASNVANQQSTGALPTANGAVPAGAPQAYTPLQVTQTAVPGSGTQ 66

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
                    T +   DP  P A+ SG+V  PNV++  E          Y ANL T+K   
Sbjct: 67  TSVTPTTPGT-IAIADPQAPFADESGMVAAPNVDLAQELIGQMVAKYSYTANLATLKADR 125

Query: 123 DMMTTTLD 130
           DM    LD
Sbjct: 126 DMTKALLD 133


>gi|322806995|emb|CBZ04565.1| flagellar basal-body rod protein FlgC [Clostridium botulinum H04402
           065]
          Length = 67

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 33/63 (52%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D S   + +DP HP A+  G V  PNVNVL E ADM  + R Y AN+  +     M    
Sbjct: 3   DPSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKA 62

Query: 129 LDL 131
           L++
Sbjct: 63  LEI 65


>gi|54297180|ref|YP_123549.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Paris]
 gi|53750965|emb|CAH12376.1| Flagellar basal-body rod protein FlgC [Legionella pneumophila str.
           Paris]
          Length = 140

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 10/131 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---------GG 60
           IA S +  ++ R+   + N++NA     +P  + Y+ K   F+ V   +          G
Sbjct: 9   IAASAMTAETVRLTTSAGNMSNANVEAGSP-DEVYQAKYPVFKSVQENANQWIGEQIKAG 67

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V++  I    +     +DP  P+A+  G V   N+N + E A++   +R Y  N++ +  
Sbjct: 68  VKLDGIYQSDAEPHRRYDPNSPIADKDGFVYTSNINYVEEMANIISASRSYQMNIELLNT 127

Query: 121 SHDMMTTTLDL 131
           +  +M  TL L
Sbjct: 128 TKQLMQRTLQL 138


>gi|52841449|ref|YP_095248.1| flagellar basal body rod protein FlgC [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|54294161|ref|YP_126576.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Lens]
 gi|148358804|ref|YP_001250011.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Corby]
 gi|296106849|ref|YP_003618549.1| flagellar basal-body rod protein FlgC [Legionella pneumophila
           2300/99 Alcoy]
 gi|52628560|gb|AAU27301.1| flagellar basal body rod protein FlgC [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|53753993|emb|CAH15464.1| Flagellar basal-body rod protein FlgC [Legionella pneumophila str.
           Lens]
 gi|148280577|gb|ABQ54665.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Corby]
 gi|295648750|gb|ADG24597.1| flagellar basal-body rod protein FlgC [Legionella pneumophila
           2300/99 Alcoy]
 gi|307609975|emb|CBW99504.1| flagellar basal-body rod protein FlgC [Legionella pneumophila 130b]
          Length = 140

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 10/131 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---------GG 60
           IA S +  ++ R+   + N++NA     +P  + Y+ K   F+ V   +          G
Sbjct: 9   IAASAMTAETVRLTTSAGNMSNANVEAGSP-DEVYQAKYPVFKSVQENANQWMGEQIKAG 67

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V++  I    +     +DP  P+A+  G V   N+N + E A++   +R Y  N++ +  
Sbjct: 68  VKLDGIYESDAEPHRRYDPNSPIADKDGFVYTSNINYVEEMANIISASRSYQMNIELLNT 127

Query: 121 SHDMMTTTLDL 131
           +  +M  TL L
Sbjct: 128 TKQLMQRTLQL 138


>gi|254785369|ref|YP_003072798.1| flagellar basal body rod protein FlgC [Teredinibacter turnerae
           T7901]
 gi|237685992|gb|ACR13256.1| flagellar basal-body rod protein FlgC [Teredinibacter turnerae
           T7901]
          Length = 145

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 15/137 (10%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV---MHGSG------ 59
           ++A SG+  QS R+   + NIANA  +  +  +  YR +   F  V   M   G      
Sbjct: 8   NVAGSGMNAQSIRLNTTASNIANAEASSASADTT-YRGRHPVFASVQAAMLNGGDALYSE 66

Query: 60  -----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                GVRV  I   Q+     ++P  P A+  G V YPNVNV+ E  +M   +R +  N
Sbjct: 67  DQSAVGVRVDGIVESQAPLQPRYEPESPNADEDGYVYYPNVNVVEEMTNMISASRSFQVN 126

Query: 115 LQTIKQSHDMMTTTLDL 131
           ++ +  +  M+   L L
Sbjct: 127 VEVMNSAKQMVQRVLTL 143


>gi|146343395|ref|YP_001208443.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. ORS278]
 gi|146196201|emb|CAL80228.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. ORS278]
          Length = 136

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 12/128 (9%)

Query: 13  SGLAVQSARMQIISENIANARTTG---DTPGSDP------YRRKTISFEEVMHGSGGVRV 63
           SG+   + R+++ + N+ANAR+TG   DT G+ P      Y    +   +V  G     +
Sbjct: 10  SGMNAAARRLEVSASNVANARSTGALPDTNGNVPAGAPKAYDPLELVQSDVAGGGTQTTI 69

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            K G   S     +DP  P AN  G+V  P V++  E          + AN + +K S +
Sbjct: 70  AKAGNGTSA---SYDPTAPFANKEGLVAAPRVDLAQEMISQLVAKYSFAANARVLKASDE 126

Query: 124 MMTTTLDL 131
           M    +D+
Sbjct: 127 MSRIVIDM 134


>gi|241761153|ref|ZP_04759242.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241374772|gb|EER64233.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 134

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 3/135 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           MD  ++   I+   ++ Q  R+   + N+ANA +   +  +  +  K I F  V    G 
Sbjct: 1   MDRPLSIFDISGRAMSAQLVRLNTNASNLANANSVASSKEAAFHPLKPI-FSTVTQSPGI 59

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+V K+    S   +  DP HP+A+ +G V    V+   E  +M ET R Y  N+Q +
Sbjct: 60  ATVKVNKVVATGSPPTQIHDPTHPLADENGDVWAAGVDTAQEMVEMIETARDYQNNVQVM 119

Query: 119 KQSHDMMTTTLDLLR 133
           + +  +   TL + R
Sbjct: 120 QTAKSLTLDTLKMER 134


>gi|56551509|ref|YP_162348.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|260752884|ref|YP_003225777.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|4378860|gb|AAD19728.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|56543083|gb|AAV89237.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258552247|gb|ACV75193.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 134

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 3/135 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           MD  ++   I+   ++ Q  R+   + N+ANA +   +  +  +  K I F  V    G 
Sbjct: 1   MDRPLSIFDISGRAMSAQLVRLNTNASNLANANSVASSKEAAFHPLKPI-FSTVTQSPGI 59

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+V K+    S   +  DP HP+A+ +G V    V+   E  +M ET R Y  N+Q +
Sbjct: 60  ATVKVDKVVATGSPPTQIHDPTHPLADENGDVWAAGVDTAQEMVEMIETARDYQNNVQVM 119

Query: 119 KQSHDMMTTTLDLLR 133
           + +  +   TL + R
Sbjct: 120 QTAKSLTLDTLKMER 134


>gi|119715008|ref|YP_921973.1| flagellar basal-body rod protein [Nocardioides sp. JS614]
 gi|119535669|gb|ABL80286.1| flagellar basal-body rod protein [Nocardioides sp. JS614]
          Length = 130

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVMHGSGGVRVKKIGV 68
           IA S + V    +  ++ NIAN  T   TP S + ++ + +     +   GGV V  +  
Sbjct: 9   IAGSSMGVHQTWLDTLASNIANVNTV--TPTSQNAFQAQMLIVRSAV--GGGVEVAGLAQ 64

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                    DPG+P+A+A G V+ P++++  +   +    R + A++Q  KQ+ +  T  
Sbjct: 65  SDPQGRLVSDPGNPMADADGYVRAPDMDMSTQMTQLVMAQRGFQASVQVTKQAQETYTAA 124

Query: 129 LDLLR 133
           L + R
Sbjct: 125 LQIGR 129


>gi|15606427|ref|NP_213807.1| flagellar biosynthesis FlgC [Aquifex aeolicus VF5]
 gi|6225342|sp|O67243|FLGC_AQUAE RecName: Full=Flagellar basal-body rod protein flgC
 gi|2983627|gb|AAC07195.1| flagellar biosynthesis FlgC [Aquifex aeolicus VF5]
          Length = 134

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 7/128 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----GSGGVRVKK 65
           I+ SG+  Q  RM  ++ N+AN  +        P+ R    FE V +        V V++
Sbjct: 10  ISASGMYAQRIRMNTVASNLANYESFKS--DGTPFNRLVPVFEAVENLEDPSEVYVNVRE 67

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  +   F   +DP +P A+  G V+ PN+  + E  DM    R Y ANL+    + ++ 
Sbjct: 68  IR-EVPGFKLIYDPENPNADERGYVRLPNIEPVKEMVDMITAVRSYEANLKAFSLTKEIF 126

Query: 126 TTTLDLLR 133
             T +  +
Sbjct: 127 ERTFEAWK 134


>gi|256376475|ref|YP_003100135.1| hypothetical protein Amir_2349 [Actinosynnema mirum DSM 43827]
 gi|255920778|gb|ACU36289.1| protein of unknown function DUF1078 domain protein [Actinosynnema
           mirum DSM 43827]
          Length = 132

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 2/130 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  S  IA +G++V    +  +++NIAN      T G     R  ++        GGV V
Sbjct: 3   LFDSIGIAETGVSVHRKWLDAVADNIANVNNATSTAGPAFQARYVVARSR--GEDGGVTV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             +    +     ++P +P+A+A+G V+YP++++  +   +    R Y ANL  + ++  
Sbjct: 61  GGVLSGDAEGKIVYEPTNPLADANGNVRYPDIDLGEQMGQLIMAQRGYQANLAVVDRAKT 120

Query: 124 MMTTTLDLLR 133
                L L R
Sbjct: 121 AYEAALQLGR 130


>gi|148252489|ref|YP_001237074.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. BTAi1]
 gi|146404662|gb|ABQ33168.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. BTAi1]
          Length = 125

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 8/118 (6%)

Query: 21  RMQIISENIANARTTGDTPGSD-------PYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           R+++ + N+ANAR+TG  P ++       P     +   +     GG +       Q T 
Sbjct: 7   RLEVSASNVANARSTGALPDANGKLPAGAPKAYDPLELVQSDVAGGGTQTTITRASQGTS 66

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              ++P  P AN  G+V  PNV++  E          + AN + +K S +M    +D+
Sbjct: 67  AS-YEPSAPFANKDGLVAAPNVDLAQEMISQLVAKYSFAANARVLKASDEMSRIVVDM 123


>gi|207110317|ref|ZP_03244479.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 113

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 48/113 (42%), Gaps = 31/113 (27%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMHGS 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F E+++  
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANA 86
                                      V V KI  D S  + ++DP HP ANA
Sbjct: 61  IAQNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANA 113


>gi|85710162|ref|ZP_01041227.1| flagellar cell-proximal portion protein [Erythrobacter sp. NAP1]
 gi|85688872|gb|EAQ28876.1| flagellar cell-proximal portion protein [Erythrobacter sp. NAP1]
          Length = 125

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGGVRVKKIGVDQST 72
            ++ Q  RM + + N+ANA +   +   + YR     F  E+   SG   V+  G+ QS 
Sbjct: 5   AMSAQLVRMNVATSNLANAGSVASSEA-EAYRPMRAVFRAELDRASGLSSVQTAGITQSN 63

Query: 73  FV--EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
               + +DP HP+A+ +G V    V+   E  ++ ++ R Y   +Q ++ +  +M  TL
Sbjct: 64  EAPSKRYDPSHPLADETGHVFEAPVDESAEMVEIMDSARQYQNMVQALQTAKQLMLETL 122


>gi|74101656|gb|AAZ99746.1| FlgCL [Aeromonas hydrophila]
          Length = 141

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHGS--GGV 61
           IA S +  Q+ R+  ++ N+AN  +     GS+    + I       ++ V      G  
Sbjct: 9   IAGSAMRAQTVRLDTVASNLANVDSAA---GSEEAAFRAIKPVFSTLYQRVQDADSLGAA 65

Query: 62  RVKKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           +V+  G+ QS     +  +P +P+A+  G V Y NVN + E ADM   +R +  +++ I 
Sbjct: 66  QVQIAGIVQSDRQVDKRLEPTNPLADQDGFVYYSNVNAVEEMADMMSASRGFETSVEVIN 125

Query: 120 QSHDMMTTTLDL 131
           + + M    L L
Sbjct: 126 RINSMQQGLLRL 137


>gi|148554191|ref|YP_001261773.1| flagellar basal-body rod protein FlgC [Sphingomonas wittichii RW1]
 gi|148499381|gb|ABQ67635.1| flagellar basal-body rod protein FlgC [Sphingomonas wittichii RW1]
          Length = 134

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 10/128 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGS--DPYRRKTISFEEVMHGSG--GVRVKK 65
           IA   ++ Q  R+   + N+ANA   G   GS  + +R     F  V    G   V+V +
Sbjct: 10  IAGRAMSAQMVRLNTSASNLANA---GSVAGSKAEAFRAIKPVFSSVTDAPGVATVKVDQ 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +        + +DP HP A+  G V    V+   E  +M ET R Y  N+  ++ +    
Sbjct: 67  VVASNIEPTKRYDPNHPKADKDGNVWEAGVDQAQELVEMMETARQYQNNVSVMQTAK--- 123

Query: 126 TTTLDLLR 133
           T TLD LR
Sbjct: 124 TLTLDTLR 131


>gi|145297453|ref|YP_001140294.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850225|gb|ABO88546.1| lateral flagellar basal body rod protein, LfgC [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 141

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHGS--GGV 61
           IA S +  Q+ R+  ++ N+AN  +     GS+    + I       ++ V      G  
Sbjct: 9   IAGSAMRAQTVRLDTVASNLANVDSAA---GSEDAAFRAIKPVFSTLYQRVQDADSLGAA 65

Query: 62  RVKKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           +V+  G+ QS     +  +P +P+A+  G V Y NVN + E ADM   +R +  +++ I 
Sbjct: 66  QVQIAGIVQSDRQVDKRLEPTNPLADQDGFVYYSNVNAVEEMADMMSASRGFETSVEVIN 125

Query: 120 QSHDMMTTTLDL 131
           + + M    L L
Sbjct: 126 RINSMQQGLLRL 137


>gi|298345988|ref|YP_003718675.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
 gi|304390254|ref|ZP_07372208.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315654575|ref|ZP_07907481.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii ATCC
           51333]
 gi|315657519|ref|ZP_07910401.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|298236049|gb|ADI67181.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
 gi|304326736|gb|EFL93980.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315491039|gb|EFU80658.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii ATCC
           51333]
 gi|315491991|gb|EFU81600.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 132

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 2/125 (1%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-SGGVRVKKIGV 68
           IA +G+ V    +  IS+NIAN  TT      + +R + +  + V +G   G  V  I +
Sbjct: 9   IAGTGMTVNRKWLDCISDNIANINTT-KPMNEEAFRARYVVAQAVDYGRPAGTMVSGIAL 67

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             +     +DP  P AN  G V++P++++  +   +    R Y AN   + ++       
Sbjct: 68  GGTDGRIVYDPRDPNANEEGYVRHPDIDLGSQMTQLIMAQRAYQANAAVVDRAKSTYEAA 127

Query: 129 LDLLR 133
           L + R
Sbjct: 128 LQIGR 132


>gi|269796400|ref|YP_003315855.1| flagellar basal-body rod protein FlgC [Sanguibacter keddieii DSM
           10542]
 gi|269098585|gb|ACZ23021.1| flagellar basal-body rod protein FlgC [Sanguibacter keddieii DSM
           10542]
          Length = 134

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHGSGGVRVKKIGV 68
           IA++G+ V    +  +S+N+AN  T    P  +  ++ + +    V +   G  V+  G+
Sbjct: 9   IASTGMTVNRKWLDAVSDNLANINTV--RPSDEAAFQARYVVASAVGYPENGQGVQVAGI 66

Query: 69  D----QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +    +   V E  P HP+A+A G VKYP V++  + + M    R Y AN   + ++   
Sbjct: 67  ELGSAEGRMVHE--PDHPLADAEGYVKYPEVDMAGQMSQMIMAQRGYQANASVVDRAKAT 124

Query: 125 MTTTLDLLR 133
               L + R
Sbjct: 125 YEAALQIGR 133


>gi|326386928|ref|ZP_08208542.1| flagellar cell-proximal portion protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208608|gb|EGD59411.1| flagellar cell-proximal portion protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 140

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 7/127 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGV 68
           +    ++ Q  RM   + N+ANA T         YR     F  V+  S G+  VK  GV
Sbjct: 14  LTGQAMSAQLVRMNTAASNLANAGTVASN-AQGAYRPLKAVFATVLDRSTGLASVKVQGV 72

Query: 69  DQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            QS  T V   +P HP+A+A+G V    V+   E  +M E+ R Y   ++ ++    +M 
Sbjct: 73  YQSGATPVRTHNPDHPLADANGDVWSSPVDENAEMVEMTESARQYQNVVEAMQTGKQLM- 131

Query: 127 TTLDLLR 133
             LD LR
Sbjct: 132 --LDTLR 136


>gi|294084420|ref|YP_003551178.1| flagellar basal-body rod protein FlgC [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663993|gb|ADE39094.1| flagellar basal-body rod protein FlgC [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 138

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 11/130 (8%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSD--PYRRKTISFE----EVMHGSGGVRV 63
           I+   +A Q  R+  I+ N+ANA   G+   S+   YR     FE    + ++ SG    
Sbjct: 10  ISGRAMAAQMVRLNTIASNLANA---GNLASSEDEAYRSMKPVFETRFADNVNDSGMSTT 66

Query: 64  KKIGVDQSTFVEE--FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           + +GV + +   E  + P HP ++A G V    VNV  E  +M E +R Y  N++ +   
Sbjct: 67  QVVGVTKLSRKPERIYMPDHPKSDAKGFVYSAAVNVEEEFVEMLEASRQYQNNIEVVTTL 126

Query: 122 HDMMTTTLDL 131
             +M  T+++
Sbjct: 127 RALMMRTINM 136


>gi|254438373|ref|ZP_05051867.1| flagellar basal-body rod protein FlgC [Octadecabacter antarcticus
           307]
 gi|198253819|gb|EDY78133.1| flagellar basal-body rod protein FlgC [Octadecabacter antarcticus
           307]
          Length = 138

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 5/127 (3%)

Query: 10  IANSGLAVQSARMQIISENIANA--RTTGDTPGSDPYRRK-TISFEEVMHGS--GGVRVK 64
           IA   +A Q  R+  ++ NIANA  R         P R    ++FE+ +  +    V V 
Sbjct: 10  IAGRSMAAQMVRLNTVASNIANANARAGSAEETFRPLRPVFKVAFEDGLRDAERSTVDVV 69

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I       +   +PGHP+A+  G V    V+V  E  DM E +R +  NL+ +     +
Sbjct: 70  DIVSLDRLPLRVLEPGHPLADEEGFVYVAPVDVNEEMVDMLEASRQFQNNLEVVTTMRTL 129

Query: 125 MTTTLDL 131
           M  T+++
Sbjct: 130 MLRTVNM 136


>gi|192292820|ref|YP_001993425.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris TIE-1]
 gi|192286569|gb|ACF02950.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris TIE-1]
          Length = 623

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 7/61 (11%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
          IA +GL V  A M ++S N+ANA    +TPG   Y RKT++   V  G  G  VK +GVD
Sbjct: 9  IAMAGLRVNQATMSLVSSNVANA----ETPG---YVRKTVNQSAVNAGETGTSVKVVGVD 61

Query: 70 Q 70
          +
Sbjct: 62 R 62


>gi|39936992|ref|NP_949268.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          CGA009]
 gi|39650849|emb|CAE29372.1| possible flagellar hook-associated protein 1 FlgK
          [Rhodopseudomonas palustris CGA009]
          Length = 623

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 7/61 (11%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
          IA +GL V  A M ++S N+ANA    +TPG   Y RKT++   V  G  G  VK +GVD
Sbjct: 9  IAMAGLRVNQATMSLVSSNVANA----ETPG---YVRKTVNQSAVNAGETGTSVKVVGVD 61

Query: 70 Q 70
          +
Sbjct: 62 R 62


>gi|119947179|ref|YP_944859.1| flagellar basal-body rod protein FlgC [Psychromonas ingrahamii 37]
 gi|119865783|gb|ABM05260.1| flagellar basal-body rod protein FlgC [Psychromonas ingrahamii 37]
          Length = 142

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 13/133 (9%)

Query: 11  ANSGLAVQSARMQIISENIANART-TGDTPGSDPYRRKTISFEEVMHG----------SG 59
           A S +  Q+ R+  IS N+ANA + +G+    D ++     F  + +           S 
Sbjct: 10  AGSAMTAQTVRLNTISSNLANADSFSGNK--EDVFKPLKPIFATIYNNMNNGSASNIRSA 67

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            V V  +    S   +  +P +P+ANA G V Y  ++V+ E ADM   +R +  N++ + 
Sbjct: 68  QVMVADVIATDSLTQQRHEPENPLANAEGNVFYSGIDVVSEMADMMSASRSFEMNVEVLN 127

Query: 120 QSHDMMTTTLDLL 132
            +  M  + + +L
Sbjct: 128 NAKSMQQSLISVL 140


>gi|68164544|gb|AAY87273.1| predicted flagellar basal body rod protein [uncultured bacterium
          BAC17H8]
          Length = 262

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 12/85 (14%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +S H+A +GL  Q  RMQII+ N+AN  TTG       ++R   +FE +++     +V++
Sbjct: 4  SSMHVAKTGLNAQQTRMQIIANNLANVNTTG-------FKRDRANFETLLY-----QVRR 51

Query: 66 IGVDQSTFVEEFDPGHPVANASGIV 90
          +  DQ T          V   + IV
Sbjct: 52 VAGDQVTAEANLTSSFSVGTGARIV 76


>gi|239815254|ref|YP_002944164.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
 gi|239801831|gb|ACS18898.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
          Length = 153

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 26/153 (16%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD--PYR------------- 45
           MDY   S  I+  G+ ++  R+ + + N+ANA T     G+   P R             
Sbjct: 1   MDY-TQSFAISAIGMNIERTRVDVAALNLANANTVQGVGGTSYQPLRVIAEARSPGGEGA 59

Query: 46  -------RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
                   + +   +   GS  VRV             ++PGHP+AN SG V Y  V+  
Sbjct: 60  AAFGALVSQGLDAADAAQGSPLVRVVPTNAPPRLV---YEPGHPLANESGYVAYAAVDTA 116

Query: 99  VETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            E   M    R Y AN+  +  +  +    LD+
Sbjct: 117 TEMVSMMSATRAYEANVSAMNTARTLALRALDI 149


>gi|299066533|emb|CBJ37723.1| putative Flagellar basal-body rod protein FlgC [Ralstonia
           solanacearum CMR15]
          Length = 157

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 26/155 (16%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           MDY  A A I+ +G+AV+  R+ + S N+ANA T   T G++    + ++    M     
Sbjct: 1   MDYARAFA-ISAAGMAVERTRVDVASLNLANANTVLTTDGANYQPLRVVARAMPMGANQE 59

Query: 58  SGGV----RVKKIGVD--------------QSTFVEE---FDPGHPVANASGIVKYPNVN 96
           +G V    RV++ G+D              + T  +    ++PGHP AN  G V Y  V+
Sbjct: 60  AGWVSFSDRVEQ-GLDTPERSSLSLPLVQTEPTGAQPRMVYEPGHPFANDKGFVAYQGVD 118

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              E   +    R Y AN+  +  +  +    LD+
Sbjct: 119 TATEMVTLMSALRAYEANVVAMNTARTLSLKALDI 153


>gi|149184205|ref|ZP_01862523.1| flagellar basal-body rod protein FlgC [Erythrobacter sp. SD-21]
 gi|148831525|gb|EDL49958.1| flagellar basal-body rod protein FlgC [Erythrobacter sp. SD-21]
          Length = 113

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 22  MQIISENIANARTTGDTPGSDP--YRRKTISFEEVMHGSGG---VRVKKIGVDQSTFVEE 76
           M   + N+ANA   G   GS+   YR     FE+ +  + G   VRV  +  + +  +  
Sbjct: 1   MNTAASNLANA---GSVAGSEAEAYRPMRTVFEQELDRASGLSSVRVGGVVREDTAPIRR 57

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            DPGHP+A+ +G V    V+   E  +M E +R Y   ++ +  +  +M  T+ +
Sbjct: 58  HDPGHPLADENGDVWEAPVDENAEMVEMLEASRQYRNMVEALSTAKQLMLETMRM 112


>gi|163760754|ref|ZP_02167834.1| probable flagellar basal body rod protein [Hoeflea phototrophica
           DFL-43]
 gi|162282076|gb|EDQ32367.1| probable flagellar basal body rod protein [Hoeflea phototrophica
           DFL-43]
          Length = 112

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 52/124 (41%), Gaps = 28/124 (22%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           + A SG+A QS RM  I+ N+AN     DTP    Y RKT+  E V    GGVR      
Sbjct: 7   NTAFSGMAAQSKRMDAIASNVANV----DTP---DYNRKTV--EMVTTAGGGVRA----- 52

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                        P  + SG      V++  E  DM E+   Y ANL  ++   DM    
Sbjct: 53  --------VPREAPAGSNSG------VDLATELMDMAESKMAYEANLAVMETGMDMWDML 98

Query: 129 LDLL 132
           +  L
Sbjct: 99  MSAL 102


>gi|332187874|ref|ZP_08389607.1| flagellar basal-body rod protein FlgC [Sphingomonas sp. S17]
 gi|332012035|gb|EGI54107.1| flagellar basal-body rod protein FlgC [Sphingomonas sp. S17]
          Length = 136

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 10/131 (7%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------SFEEVMHGSGGVR 62
            ++   ++ Q  RM   + N+ANA   G   GS     KT+      SF+    G   V 
Sbjct: 10  QVSGRAMSAQLVRMNTTASNLANA---GGIAGSVETAYKTMKPVFRTSFDAAT-GLSTVD 65

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V+KI        +  DP +P+A+  G V    V+   E  DM ET R Y  N++ ++ + 
Sbjct: 66  VEKIVTAGEDPTKRHDPNNPLADKDGNVFEAAVDETRELVDMMETARTYQNNVEVMQTAK 125

Query: 123 DMMTTTLDLLR 133
            ++  TL L R
Sbjct: 126 SLILDTLKLGR 136


>gi|291334310|gb|ADD93971.1| predicted flagellar proximal rod protein [uncultured marine
           bacterium MedDCM-OCT-S09-C247]
          Length = 138

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 7/128 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV----MHGSGGVRVKK 65
           +A  G++ Q  R+  ++ N+ANAR+   +  ++ YR     F  +    +  SG   V  
Sbjct: 10  VAARGMSAQMVRLNTVASNLANARSVASSE-AEAYRAIKPVFSTLYADDLERSGVSSVDV 68

Query: 66  IGVDQSTFVEE--FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           + +       E  + PGHP A+  G +    VN   E  +M E +R Y  N++ +     
Sbjct: 69  VDIVAVDREPEKVYQPGHPKADEDGYIYMAAVNTEEELVEMLEASRQYENNVEVVSTLRG 128

Query: 124 MMTTTLDL 131
           +M  T+ +
Sbjct: 129 LMMRTISM 136


>gi|27380939|ref|NP_772468.1| flagellar basal body rod protein FlgG [Bradyrhizobium japonicum
          USDA 110]
 gi|27354105|dbj|BAC51093.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
          110]
          Length = 262

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 14/69 (20%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          H A +G+A Q   +Q+IS NIAN RTTG       ++++T +F+++++      V+++G 
Sbjct: 5  HTAATGMAAQELNVQVISNNIANLRTTG-------FKKQTAAFQDLIY----EHVRRVGA 53

Query: 69 ---DQSTFV 74
             DQ T V
Sbjct: 54 QASDQGTIV 62


>gi|149202210|ref|ZP_01879183.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
 gi|149144308|gb|EDM32339.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
          Length = 138

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 9/127 (7%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV---MHGSGGVRVKKI 66
           +A+S ++ Q  R+  ++ N+ANA+    T   + YR     FE +     G  G+    +
Sbjct: 9   VASSAMSAQMVRLNTVASNMANAQAVSTT-KEEAYRPLRPVFETIYADQTGQSGLSTTHV 67

Query: 67  ----GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
                +D+   V  + P HP+A+  G V    VN   E  +M E +R Y   L+T+    
Sbjct: 68  TDVVQLDREP-VRAYRPDHPMADEEGFVYESVVNPDEEMVEMVEASRQYQNVLETVSTLR 126

Query: 123 DMMTTTL 129
            +M  T+
Sbjct: 127 TLMARTV 133


>gi|256833243|ref|YP_003161970.1| flagellar basal body rod protein [Jonesia denitrificans DSM 20603]
 gi|256686774|gb|ACV09667.1| flagellar basal body rod protein [Jonesia denitrificans DSM 20603]
          Length = 134

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 5/128 (3%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKKI 66
           IA++GL V    +  +S+N+AN  T   T       R  I+  +   G   + G +V  I
Sbjct: 9   IASTGLTVNRKWLDAVSDNLANVNTVRPTDEEAFQARYVIA--QAAGGPRDTAGTQVAGI 66

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            +  +     ++P HP+A+  G V+YP++++  + + +    R Y A+   ++++     
Sbjct: 67  ELGSAEGRLVYEPDHPLADEGGYVRYPDIDLSSQMSQLIMAQRGYQASTAVVERARATYE 126

Query: 127 TTLDLLRD 134
             L + R+
Sbjct: 127 QALSIGRN 134


>gi|77463650|ref|YP_353154.1| flagellar distal rod protein [Rhodobacter sphaeroides 2.4.1]
 gi|126462482|ref|YP_001043596.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          ATCC 17029]
 gi|221639493|ref|YP_002525755.1| Flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          KD131]
 gi|332558506|ref|ZP_08412828.1| FlgG [Rhodobacter sphaeroides WS8N]
 gi|11095160|gb|AAG29749.1|AF205139_1 flagellar distal rod protein [Rhodobacter sphaeroides]
 gi|77388068|gb|ABA79253.1| Flagellar distal rod protein [Rhodobacter sphaeroides 2.4.1]
 gi|126104146|gb|ABN76824.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          ATCC 17029]
 gi|221160274|gb|ACM01254.1| Flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          KD131]
 gi|332276218|gb|EGJ21533.1| FlgG [Rhodobacter sphaeroides WS8N]
          Length = 262

 Score = 42.7 bits (99), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          H+A++GL  Q  RMQ+IS N+AN  TTG       ++R   +FE +++
Sbjct: 7  HVASTGLNAQQTRMQVISNNLANVNTTG-------FKRDRANFESLLY 47



 Score = 33.9 bits (76), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           G ++  NVNV+ E  DM ET R Y  N ++I  S +MM
Sbjct: 218 GSLEASNVNVVQELVDMIETQRAYEVNSKSISASDEMM 255


>gi|121997321|ref|YP_001002108.1| flagellar basal-body rod protein FlgC [Halorhodospira halophila
           SL1]
 gi|121588726|gb|ABM61306.1| flagellar basal-body rod protein FlgC [Halorhodospira halophila
           SL1]
          Length = 189

 Score = 42.4 bits (98), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 67/188 (35%), Gaps = 59/188 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L+ +  +A +G+  Q  R+  ++ N+ANA T   +P  + YR +   F   +H       
Sbjct: 3   LMNAIDVAGTGMNAQQLRLNTVASNLANAETVASSP-EEAYRARQPVFAAALHQAQGGYP 61

Query: 58  ---------------SGGV--RVKKIGVDQSTFVEE------------------------ 76
                          SGG   R+  +   +  F  E                        
Sbjct: 62  QGGGPQPAHTPTWAESGGPVDRISPVSFQRQFFGGEPAGVPSAGDPYASPSPSVPVFMPG 121

Query: 77  -----------FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                      + P HP A+  G V   NVN + E  +M   +R +  N++ +  S D+M
Sbjct: 122 VVESDAEIEPLYQPHHPQADDDGYVYRSNVNTVEEMTNMISASRSFQNNVEVMNTSRDLM 181

Query: 126 TTTLDLLR 133
             TL L R
Sbjct: 182 LETLRLGR 189


>gi|146277710|ref|YP_001167869.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555951|gb|ABP70564.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17025]
          Length = 138

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 7/124 (5%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRVKKIGVDQ 70
            L+ Q  RM  ++ N+ANA T  DT     +R     FE       G  G+    +    
Sbjct: 14  ALSAQMVRMNTVASNLANAGTVSDT-AETAFRPLRPVFETTYADAVGKSGLSTTDVAAVV 72

Query: 71  STFVEE---FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           S   E    + P HP A+A G V    V+V  E  +M E +R Y   L+ +     +M  
Sbjct: 73  SLDREPARTYRPDHPQADAEGYVWEAPVSVDEEMVEMMEASRQYQNTLEAVSTLRSLMAR 132

Query: 128 TLDL 131
           T  +
Sbjct: 133 TASM 136


>gi|146277706|ref|YP_001167865.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          ATCC 17025]
 gi|145555947|gb|ABP70560.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          ATCC 17025]
          Length = 262

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          H+A +GL  Q  RMQ+IS N+AN  TTG       ++R   +FE +++
Sbjct: 7  HVAKTGLNAQQTRMQVISNNLANVNTTG-------FKRDRANFESLLY 47



 Score = 34.7 bits (78), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           G ++  NVNV+ E  DM ET R Y  N ++I  S +MM
Sbjct: 218 GALESSNVNVVQELVDMIETQRAYEVNSKSISASDEMM 255


>gi|149201611|ref|ZP_01878585.1| Flagellar distal rod protein [Roseovarius sp. TM1035]
 gi|149144659|gb|EDM32688.1| Flagellar distal rod protein [Roseovarius sp. TM1035]
          Length = 262

 Score = 42.0 bits (97), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          H+A +GL  Q AR+Q+IS N+AN  TTG       ++R   +FE +++
Sbjct: 7  HVAKTGLNAQQARIQVISNNLANVNTTG-------FKRDRANFETLLY 47


>gi|68164548|gb|AAY87277.1| predicted flagellar proximal rod protein [uncultured bacterium
           BAC17H8]
          Length = 138

 Score = 41.6 bits (96), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSD--PYRRKTISFEEV----MHGSGGVRV 63
           +A+  ++ Q  R+  I+ N+ANA   G+  GS+   YR     F+      +  SG    
Sbjct: 10  VASRSMSAQLVRLNTIASNLANA---GNISGSEDQAYRAMKPIFKTTYAANVKDSGISTT 66

Query: 64  KKIGVDQSTFVEE--FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +  G+  S    E  + P HP+++  G V    VNV  E  +M E  R Y  N++ +   
Sbjct: 67  EVAGITTSERRPERIYMPNHPLSDQDGFVYAAAVNVEEEFVEMLEAKRQYQNNVEVVTTL 126

Query: 122 HDMMTTTLDL 131
             +M  T+++
Sbjct: 127 RALMMRTINM 136


>gi|103488389|ref|YP_617950.1| flagellar basal body rod protein FlgG [Sphingopyxis alaskensis
          RB2256]
 gi|98978466|gb|ABF54617.1| Flagellar basal-body rod FlgG [Sphingopyxis alaskensis RB2256]
          Length = 261

 Score = 41.6 bits (96), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 7/52 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + + H+A +GL  QS RMQ+I+ N+AN  TTG       ++R   SFE + +
Sbjct: 3  LGALHVARTGLDAQSFRMQVIANNLANVNTTG-------FKRDRASFETLSY 47


>gi|307945666|ref|ZP_07661002.1| flagellar basal-body rod protein FlgG [Roseibium sp. TrichSKD4]
 gi|307771539|gb|EFO30764.1| flagellar basal-body rod protein FlgG [Roseibium sp. TrichSKD4]
          Length = 260

 Score = 41.6 bits (96), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          HIA +G+  Q   +++IS N+AN RTTG       Y+R+ + F+++M+
Sbjct: 5  HIAATGMKAQERNVEVISNNVANLRTTG-------YKRQRVDFQDLMY 45


>gi|148256792|ref|YP_001241377.1| flagellar basal body rod protein FlgG [Bradyrhizobium sp. BTAi1]
 gi|146408965|gb|ABQ37471.1| Flagellar basal-body rod protein flgG (Distal rod protein)
          [Bradyrhizobium sp. BTAi1]
          Length = 262

 Score = 41.6 bits (96), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 14/69 (20%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          H A +G+A Q   +Q+IS NIAN RTTG       ++++T +F+++++      V+++G 
Sbjct: 5  HTAATGMAAQELNVQVISNNIANLRTTG-------FKKQTAAFQDLIYD----HVRRVGA 53

Query: 69 ---DQSTFV 74
             DQ T +
Sbjct: 54 QSSDQGTIL 62


>gi|146341904|ref|YP_001206952.1| flagellar basal body rod protein FlgG [Bradyrhizobium sp. ORS278]
 gi|146194710|emb|CAL78735.1| Flagellar basal-body rod protein flgG (Distal rod protein)
          [Bradyrhizobium sp. ORS278]
          Length = 262

 Score = 41.6 bits (96), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 14/69 (20%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          H A +G+A Q   +Q+IS NIAN RTTG       ++++T +F+++++      V+++G 
Sbjct: 5  HTAATGMAAQELNVQVISNNIANLRTTG-------FKKQTAAFQDLIY----EHVRRVGA 53

Query: 69 ---DQSTFV 74
             DQ T +
Sbjct: 54 QSSDQGTIL 62


>gi|84514831|ref|ZP_01002194.1| Flagellar distal rod protein [Loktanella vestfoldensis SKA53]
 gi|84510990|gb|EAQ07444.1| Flagellar distal rod protein [Loktanella vestfoldensis SKA53]
          Length = 261

 Score = 41.6 bits (96), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 12/64 (18%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          H+A +GL  Q  RMQ+I+ N+AN  T G       ++   ++FE +++     +VK+ G 
Sbjct: 6  HVAKTGLNAQQTRMQVIANNLANLNTVG-------FKSDRVNFESLLY-----QVKRSGG 53

Query: 69 DQST 72
          DQ++
Sbjct: 54 DQTS 57


>gi|294084416|ref|YP_003551174.1| flagellar basal-body rod protein FlgG [Candidatus
          Puniceispirillum marinum IMCC1322]
 gi|292663989|gb|ADE39090.1| flagellar basal-body rod protein FlgG [Candidatus
          Puniceispirillum marinum IMCC1322]
          Length = 262

 Score = 41.6 bits (96), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +S H+A +GL  Q  RMQ+I+ N+AN  TTG       ++R   +FE +++
Sbjct: 4  SSMHVAKTGLNAQQTRMQVIANNLANVNTTG-------FKRDRANFETLLY 47


>gi|148554187|ref|YP_001261769.1| flagellar basal body rod protein FlgG [Sphingomonas wittichii
          RW1]
 gi|148499377|gb|ABQ67631.1| flagellar basal-body rod protein FlgG [Sphingomonas wittichii
          RW1]
          Length = 262

 Score = 41.6 bits (96), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+ H+A +GL  Q+ RMQ+I+ N+AN  TTG       ++R   SFE + +
Sbjct: 4  AALHVARTGLDAQNMRMQVIANNLANVNTTG-------FKRDRASFETLAY 47


>gi|304321121|ref|YP_003854764.1| flagellar hook-associated protein [Parvularcula bermudensis
          HTCC2503]
 gi|303300023|gb|ADM09622.1| flagellar hook-associated protein [Parvularcula bermudensis
          HTCC2503]
          Length = 481

 Score = 41.2 bits (95), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 7/64 (10%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           IANSGLA  S R Q  + NIANA   G       Y R+ +   E + GS G+ V  +G 
Sbjct: 8  SIANSGLAAASIRAQTTASNIANATVEG-------YSRRDVVLSERVVGSTGIGVSVVGT 60

Query: 69 DQST 72
          ++ T
Sbjct: 61 ERVT 64


>gi|296282281|ref|ZP_06860279.1| flagellar basal-body rod protein FlgC [Citromicrobium bathyomarinum
           JL354]
          Length = 130

 Score = 41.2 bits (95), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 5/123 (4%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGS--DPYRR-KTISFEEVMHGSG--GVRVKKIGV 68
           G    SA+M  ++   +N    G   GS  + YR  +T+  EE+   SG   VRV ++  
Sbjct: 7   GYRAMSAQMVRMNAAASNLANAGSVAGSADEAYRPIRTVFAEELDKQSGLSSVRVDRVVR 66

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             +  V   DPGHP+A+ +G V    V+   E  +M E +R Y   ++ +  +  +M  T
Sbjct: 67  SDTAPVRRHDPGHPLADENGDVWEAPVDENAEMIEMLEASRQYSNMVEAMSTAKQLMLET 126

Query: 129 LDL 131
           + +
Sbjct: 127 MRM 129


>gi|91976161|ref|YP_568820.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
          BisB5]
 gi|91682617|gb|ABE38919.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB5]
          Length = 262

 Score = 40.8 bits (94), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 14/69 (20%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          + A +G+A Q   +Q+IS NIAN RTTG       Y+++T +F+++++      V+++G 
Sbjct: 5  YTAATGMAAQELNVQVISNNIANMRTTG-------YKKQTAAFQDLIYD----HVRRVGA 53

Query: 69 ---DQSTFV 74
             DQ T +
Sbjct: 54 QASDQGTIL 62


>gi|218528727|ref|YP_002419543.1| flagellar hook protein FlgE [Methylobacterium chloromethanicum
          CM4]
 gi|218521030|gb|ACK81615.1| flagellar basal body FlaE domain protein [Methylobacterium
          chloromethanicum CM4]
          Length = 403

 Score = 40.8 bits (94), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          LI       SG+  QS R+  ++ENI NA TTG       Y+R +  F  ++  SG V  
Sbjct: 3  LIGVLRTGVSGMNAQSNRISTVAENIQNASTTG-------YKRTSAEFSSLLLDSGDVGN 55

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
             G  ++T       G P+A
Sbjct: 56 YNSGAVETTLRRSVSEGGPIA 76


>gi|330809235|ref|YP_004353697.1| flagellar basal-body rod protein flgC [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327377343|gb|AEA68693.1| Putative Flagellar basal-body rod protein flgC [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 131

 Score = 40.8 bits (94), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 11/129 (8%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-----R 62
           + I    +A + +R ++ S N+A A      PG    R   +S       +G +     R
Sbjct: 7   SEIVRGSMAYERSRAEVASYNLAIA-NVAIGPGE---RSPLLSVSPPTSFAGQLGLQQPR 62

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V       S  V E  P HP+A+ +G+V YPN+    E A +    R Y AN+++     
Sbjct: 63  VHAQARSDSRLVHE--PSHPMADQNGMVHYPNIEAAREMATLVSATRAYEANIRSYNSLR 120

Query: 123 DMMTTTLDL 131
           +M     ++
Sbjct: 121 EMTLKAFEI 129


>gi|254559268|ref|YP_003066363.1| flagellar hook protein FlgE [Methylobacterium extorquens DM4]
 gi|254266546|emb|CAX22310.1| flagellar hook protein FlgE [Methylobacterium extorquens DM4]
          Length = 403

 Score = 40.8 bits (94), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          LI       SG+  QS R+  ++ENI NA TTG       Y+R +  F  ++  SG V  
Sbjct: 3  LIGVLRTGVSGMNAQSNRISTVAENIQNASTTG-------YKRTSAEFSSLLLDSGDVGN 55

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
             G  ++T       G P+A
Sbjct: 56 YNSGAVETTLRRSVSEGGPIA 76


>gi|163850123|ref|YP_001638166.1| flagellar hook protein FlgE [Methylobacterium extorquens PA1]
 gi|163661728|gb|ABY29095.1| protein of unknown function DUF1078 domain protein
          [Methylobacterium extorquens PA1]
          Length = 403

 Score = 40.8 bits (94), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          LI       SG+  QS R+  ++ENI NA TTG       Y+R +  F  ++  SG V  
Sbjct: 3  LIGVLRTGVSGMNAQSNRISTVAENIQNASTTG-------YKRTSAEFSSLLLDSGDVGN 55

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
             G  ++T       G P+A
Sbjct: 56 YNSGAVETTLRRSVSEGGPIA 76


>gi|188579925|ref|YP_001923370.1| flagellar hook protein FlgE [Methylobacterium populi BJ001]
 gi|179343423|gb|ACB78835.1| flagellar basal body FlaE domain protein [Methylobacterium populi
          BJ001]
          Length = 402

 Score = 40.4 bits (93), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 7/82 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          LI       SG+  QS R+  ++ENI NA TTG       Y+R +  F  ++  SG V  
Sbjct: 3  LIGVLRTGVSGMNAQSNRISTVAENIQNASTTG-------YKRTSAEFSSLLLDSGDVGN 55

Query: 64 KKIGVDQSTFVEEFDPGHPVAN 85
             G  ++T       G P+A+
Sbjct: 56 YNSGAVETTLRRSVSEGGPIAS 77


>gi|240137257|ref|YP_002961726.1| flagellar hook protein FlgE [Methylobacterium extorquens AM1]
 gi|240007223|gb|ACS38449.1| flagellar hook protein FlgE [Methylobacterium extorquens AM1]
          Length = 403

 Score = 40.4 bits (93), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          LI       SG+  QS R+  ++ENI NA TTG       Y+R +  F  ++  SG V  
Sbjct: 3  LIGVLRTGVSGMNAQSNRISTVAENIQNASTTG-------YKRTSAEFSSLLLDSGDVGN 55

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
             G  ++T       G P+A
Sbjct: 56 YNSGAVETTLRRSVSEGGPIA 76


>gi|303240291|ref|ZP_07326810.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus
           CD2]
 gi|302592201|gb|EFL61930.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus
           CD2]
          Length = 137

 Score = 40.4 bits (93), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 31/146 (21%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D ++  + +    L   + R ++I++NIAN     DTPG   Y+RKT+SFEE +  +  
Sbjct: 2   LDRILFGSKVLEKSLDATATRNEVIAQNIANV----DTPG---YKRKTVSFEEQLSDA-- 52

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP-----------------NVNVLVETAD 103
                I  + S      DP H     S   +                   NV++  E A 
Sbjct: 53  -----ISKNSSFKGRRTDPRHIAIGGSSADEVKINVSEDKSSLDMRLDGNNVDIENEMAQ 107

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTL 129
           M E N  Y   +Q I  S   M + +
Sbjct: 108 MAENNIRYEVLIQRISGSFSRMKSVI 133


>gi|328543156|ref|YP_004303265.1| flagellar basal-body rod FlgG [polymorphum gilvum SL003B-26A1]
 gi|326412902|gb|ADZ69965.1| Flagellar basal-body rod FlgG [Polymorphum gilvum SL003B-26A1]
          Length = 259

 Score = 40.4 bits (93), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 11/63 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          HIA +G+  Q   +++IS N+AN RTTG       Y+R+   F+++++ +    ++++G 
Sbjct: 5  HIAATGMKAQELNVEVISNNVANMRTTG-------YKRQRADFQDLLYQN----LRRMGT 53

Query: 69 DQS 71
          D S
Sbjct: 54 DSS 56


>gi|207091983|ref|ZP_03239770.1| flagellar basal body rod protein FlgC [Helicobacter pylori
          HPKX_438_AG0C1]
          Length = 89

 Score = 40.4 bits (93), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 6/58 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----KTISFEEVMH 56
           ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR     K   F E+++
Sbjct: 2  FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILN 58


>gi|94312671|ref|YP_585880.1| flagellar basal body distal rod protein [Cupriavidus
          metallidurans CH34]
 gi|93356523|gb|ABF10611.1| flagellar basal body distal rod protein [Cupriavidus
          metallidurans CH34]
          Length = 261

 Score = 40.4 bits (93), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q  +M +IS N+AN  TTG       ++R    FEE+M+
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTTG-------FKRSRAVFEEMMY 46


>gi|326319097|ref|YP_004236769.1| fagellar hook-basal body protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375933|gb|ADX48202.1| fagellar hook-basal body protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 425

 Score = 40.0 bits (92), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 10/74 (13%)

Query: 68  VDQSTFVEEFDPGHPVANA----------SGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V  + +VE F+ G PV             SG ++  NV++  E  +M    R Y AN QT
Sbjct: 351 VGSNNWVETFESGQPVLGTPTEGKFGGLRSGALEDSNVDLTAELVNMMTAQRAYQANAQT 410

Query: 118 IKQSHDMMTTTLDL 131
           IK    +M+T ++L
Sbjct: 411 IKTQDQVMSTLVNL 424


>gi|313901523|ref|ZP_07834970.1| flagellar basal-body rod protein FlgC [Thermaerobacter subterraneus
           DSM 13965]
 gi|313468218|gb|EFR63685.1| flagellar basal-body rod protein FlgC [Thermaerobacter subterraneus
           DSM 13965]
          Length = 188

 Score = 40.0 bits (92), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 28/57 (49%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +DP HP A   G V YPNV+ L E  ++    R Y AN+     +  +    LD+ R
Sbjct: 131 YDPAHPDAGPDGYVAYPNVDPLAEMVNLLAATRAYEANVAVFAAARTLALRALDIGR 187



 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          + ++  IA SG+  Q  R+ +I+ N+AN  +T  TP   PYRR    FEE
Sbjct: 5  MFSTFDIAASGMTAQRLRLDLIASNLANVDST-RTPQGGPYRRLVPVFEE 53


>gi|188582486|ref|YP_001925931.1| flagellar basal-body rod protein FlgG [Methylobacterium populi
          BJ001]
 gi|179345984|gb|ACB81396.1| flagellar basal-body rod protein FlgG [Methylobacterium populi
          BJ001]
          Length = 263

 Score = 40.0 bits (92), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + A +G+A Q   +Q+IS NIAN RTTG       Y+R+ + F+++++
Sbjct: 5  YAAATGMAAQELNVQVISNNIANLRTTG-------YKRQQVHFQDLLY 45


>gi|163852464|ref|YP_001640507.1| flagellar basal-body rod protein FlgG [Methylobacterium
          extorquens PA1]
 gi|218531220|ref|YP_002422036.1| flagellar basal-body rod protein FlgG [Methylobacterium
          chloromethanicum CM4]
 gi|240139801|ref|YP_002964278.1| flagellar biosynthesis; cell-distal portion of basal-body rod
          [Methylobacterium extorquens AM1]
 gi|254562216|ref|YP_003069311.1| cell-distal portion of basal-body rod biosynthesis protein
          [Methylobacterium extorquens DM4]
 gi|163664069|gb|ABY31436.1| flagellar basal-body rod protein FlgG [Methylobacterium
          extorquens PA1]
 gi|218523523|gb|ACK84108.1| flagellar basal-body rod protein FlgG [Methylobacterium
          chloromethanicum CM4]
 gi|240009775|gb|ACS41001.1| flagellar biosynthesis; cell-distal portion of basal-body rod
          [Methylobacterium extorquens AM1]
 gi|254269494|emb|CAX25460.1| flagellar biosynthesis; cell-distal portion of basal-body rod
          [Methylobacterium extorquens DM4]
          Length = 263

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + A +G+A Q   +Q+IS NIAN RTTG       Y+R+ + F+++++
Sbjct: 5  YAAATGMAAQELNVQVISNNIANLRTTG-------YKRQQVHFQDLLY 45


>gi|254461663|ref|ZP_05075079.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
          HTCC2083]
 gi|206678252|gb|EDZ42739.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
          HTCC2083]
          Length = 262

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 12/64 (18%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          H+A +GL  Q  RMQ+I+ N++N  T G       ++   ++FE +++     +VK+ G 
Sbjct: 7  HVAKTGLNAQQTRMQVIANNLSNLNTVG-------FKSDRVNFESLLY-----QVKRGGG 54

Query: 69 DQST 72
          DQ++
Sbjct: 55 DQTS 58


>gi|92116887|ref|YP_576616.1| flagellar hook-associated protein [Nitrobacter hamburgensis X14]
 gi|91799781|gb|ABE62156.1| Flagellar hook-associated protein [Nitrobacter hamburgensis X14]
          Length = 619

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 9/75 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L ++  IA SGL    A + I+S N+ANA    +TPG   Y  +T+  ++++ GS G  V
Sbjct: 3  LSSALSIAMSGLRANQAALSIVSGNVANA----NTPG---YVAQTLVQDQIVTGSTGSGV 55

Query: 64 KKIGVDQS--TFVEE 76
          + IGV+++  T+V+ 
Sbjct: 56 RVIGVNRTLDTYVQS 70


>gi|299131785|ref|ZP_07024980.1| flagellar basal-body rod protein FlgG [Afipia sp. 1NLS2]
 gi|298591922|gb|EFI52122.1| flagellar basal-body rod protein FlgG [Afipia sp. 1NLS2]
          Length = 262

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 14/69 (20%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          + A +G+A Q   +Q+IS NIAN RTTG       Y+++  SF+++++      V+++G 
Sbjct: 5  YTAATGMAAQELSVQVISNNIANLRTTG-------YKKQMASFQDLLY----EHVQRVGA 53

Query: 69 ---DQSTFV 74
             DQ T +
Sbjct: 54 QASDQGTVL 62


>gi|114799186|ref|YP_758987.1| flagellar basal body rod protein FlgG [Hyphomonas neptunium ATCC
          15444]
 gi|114739360|gb|ABI77485.1| flagellar basal-body rod protein FlgG [Hyphomonas neptunium ATCC
          15444]
          Length = 261

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 7/52 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + S  IA SG+A Q  R+++IS NIAN  TT        YR +T  F ++M+
Sbjct: 1  MKSLQIAASGMAAQQMRVEVISNNIANMSTTA-------YRPRTAEFSDLMY 45


>gi|218781795|ref|YP_002433113.1| hypothetical protein Dalk_3959 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763179|gb|ACL05645.1| Putative flagellar basal body rod protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 117

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 13/130 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +IA  + + S L     + Q  + N AN  T       D Y++  ++  E  +GS   + 
Sbjct: 1   MIAGINASVSALNAYGRKFQSTANNTANIDT-------DGYKKTRVTMSEAANGSVEAKS 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +K+    S  V E       +  S +V+  NV++  E  +     R Y ANL ++K   +
Sbjct: 54  EKVN-SPSPIVSEL-----TSEGSVLVEKSNVDLAQEVTNQILAARGYEANLASVKAFDE 107

Query: 124 MMTTTLDLLR 133
           M+ +TLDL++
Sbjct: 108 MLGSTLDLIK 117


>gi|209884526|ref|YP_002288383.1| flagellar basal-body rod protein FlgG [Oligotropha
          carboxidovorans OM5]
 gi|209872722|gb|ACI92518.1| flagellar basal-body rod protein FlgG [Oligotropha
          carboxidovorans OM5]
          Length = 262

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 14/69 (20%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          + A +G+A Q   +Q+IS NIAN RTTG       Y+++  SF+++++      V+++G 
Sbjct: 5  YTAATGMAAQELSVQVISNNIANLRTTG-------YKKQMASFQDLLY----EHVQRVGA 53

Query: 69 ---DQSTFV 74
             DQ T +
Sbjct: 54 QASDQGTVL 62


>gi|312115280|ref|YP_004012876.1| flagellar hook-basal body protein [Rhodomicrobium vannielii ATCC
          17100]
 gi|311220409|gb|ADP71777.1| flagellar hook-basal body protein [Rhodomicrobium vannielii ATCC
          17100]
          Length = 413

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 7/62 (11%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          SG+A QS  +  +++NIAN  TTG       Y+R +  F  ++  SG    +  GVD  T
Sbjct: 12 SGMAAQSTALSTVADNIANVSTTG-------YKRASTEFSTLVASSGAGNYQSGGVDVDT 64

Query: 73 FV 74
           V
Sbjct: 65 RV 66


>gi|319764539|ref|YP_004128476.1| flagellar hook-basal body protein [Alicycliphilus denitrificans BC]
 gi|330826755|ref|YP_004390058.1| flagellar hook-basal body protein [Alicycliphilus denitrificans
           K601]
 gi|317119100|gb|ADV01589.1| flagellar hook-basal body protein [Alicycliphilus denitrificans BC]
 gi|329312127|gb|AEB86542.1| flagellar hook-basal body protein [Alicycliphilus denitrificans
           K601]
          Length = 426

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 10/69 (14%)

Query: 73  FVEEFDPGHPV----------ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           +VE F+ G PV          A  SG ++  NV++  E  +M    R Y AN QTIK   
Sbjct: 357 WVETFESGQPVMGVATEGAFGALRSGALEDSNVDLTAELVNMMTAQRAYQANAQTIKTQD 416

Query: 123 DMMTTTLDL 131
            +M+T ++L
Sbjct: 417 QVMSTLVNL 425


>gi|75675314|ref|YP_317735.1| flagellar basal body rod protein FlgG [Nitrobacter winogradskyi
          Nb-255]
 gi|74420184|gb|ABA04383.1| Protein of unknown function DUF1078 [Nitrobacter winogradskyi
          Nb-255]
          Length = 262

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 11/64 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          + A +G+A Q   +Q+IS NIAN RTTG       Y+++  +F+++++      V+++G 
Sbjct: 5  YTAATGMAAQELNVQVISNNIANLRTTG-------YKKQRAAFQDLIYD----HVRRVGA 53

Query: 69 DQST 72
            ST
Sbjct: 54 QAST 57


>gi|170747256|ref|YP_001753516.1| flagellar basal-body rod protein FlgG [Methylobacterium
          radiotolerans JCM 2831]
 gi|170653778|gb|ACB22833.1| flagellar basal-body rod protein FlgG [Methylobacterium
          radiotolerans JCM 2831]
          Length = 263

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + A +G+A Q   +Q+IS NIAN RTTG       Y+R+ + F+++++
Sbjct: 5  YSAATGMAAQELNVQVISNNIANLRTTG-------YKRQQVHFQDLLY 45


>gi|15639945|ref|NP_219398.1| flagellar basal-body rod protein (flgG-2) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189026184|ref|YP_001933956.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|3323282|gb|AAC65916.1| flagellar basal-body rod protein (flgG-2) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189018759|gb|ACD71377.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|291060316|gb|ADD73051.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 271

 Score = 39.3 bits (90), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 19/100 (19%)

Query: 37  DTPGSDPY---RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-------- 85
           D P  D +   R K ++FE V +      ++K G D  T+++    G P+A         
Sbjct: 169 DRPDVDGFFLDRLKIVTFENVRY------LQKKGAD--TYMQTPVSGAPIAAEGPERPAA 220

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G V+  NVNV+ E   M E NR Y AN +TI+    MM
Sbjct: 221 VQGFVEASNVNVVNEMVRMIEVNRAYEANQKTIQAEDGMM 260


>gi|120613059|ref|YP_972737.1| hypothetical protein Aave_4423 [Acidovorax citrulli AAC00-1]
 gi|120591523|gb|ABM34963.1| protein of unknown function DUF1078 domain protein [Acidovorax
           citrulli AAC00-1]
          Length = 425

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 10/74 (13%)

Query: 68  VDQSTFVEEFDPGHPVANA----------SGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V  + +VE F  G PV             SG ++  NV++  E  +M    R Y AN QT
Sbjct: 351 VGNNNWVETFQSGQPVLGTPTEGKFGGLRSGALEDSNVDLTAELVNMMTAQRAYQANAQT 410

Query: 118 IKQSHDMMTTTLDL 131
           IK    +M+T ++L
Sbjct: 411 IKTQDQVMSTLVNL 424


>gi|241766920|ref|ZP_04764726.1| flagellar basal body FlaE domain protein [Acidovorax delafieldii
           2AN]
 gi|241362624|gb|EER58472.1| flagellar basal body FlaE domain protein [Acidovorax delafieldii
           2AN]
          Length = 425

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 10/74 (13%)

Query: 68  VDQSTFVEEFDPGHPV----------ANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V  + +VE F+ G PV          A  SG ++  NV++  E  +M    R Y AN QT
Sbjct: 351 VGGNNWVETFESGQPVLGTATDGNFGALRSGALEDSNVDLTAELVNMMTAQRAYQANAQT 410

Query: 118 IKQSHDMMTTTLDL 131
           IK    +M+T ++L
Sbjct: 411 IKTQDQVMSTLVNL 424



 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 10/72 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRVKKIGVD 69
          SGL   S  + +I  NIANA TTG       ++     F E++    GS G     IGV+
Sbjct: 8  SGLNASSKNLDVIGHNIANANTTG-------FKASRAEFAEMVASAIGSAGGNNAGIGVE 60

Query: 70 QSTFVEEFDPGH 81
           +   ++F  G+
Sbjct: 61 TANVAQQFTQGN 72


>gi|154710440|gb|ABS84283.1| FlgG-2 [Treponema paraluiscuniculi]
          Length = 271

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 19/100 (19%)

Query: 37  DTPGSDPY---RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-------- 85
           D P  D +   R K ++FE V +      ++K G D  T+++    G P+A         
Sbjct: 169 DRPDVDGFFLDRLKIVTFENVRY------LQKKGAD--TYMQTPVSGAPIAAEGPERPAA 220

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G V+  NVNV+ E   M E NR Y AN +TI+    MM
Sbjct: 221 VQGFVEASNVNVVNEMVRMIEVNRAYEANQKTIQAEDGMM 260


>gi|332187904|ref|ZP_08389637.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. S17]
 gi|332012065|gb|EGI54137.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. S17]
          Length = 262

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+ HIA +GL  Q  RM++IS N+AN  TTG       ++R   +FE + +
Sbjct: 4  AAMHIARTGLDAQDMRMRVISNNLANVNTTG-------FKRDRAAFETLAY 47



 Score = 33.9 bits (76), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 24/38 (63%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           G+++  NVNV+ E  DM ET R Y  N + IK + +M+
Sbjct: 218 GMLEGSNVNVVEELVDMIETQRAYEVNSKMIKSTDEML 255


>gi|86750896|ref|YP_487392.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
          HaA2]
 gi|86573924|gb|ABD08481.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris HaA2]
          Length = 262

 Score = 39.3 bits (90), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 14/69 (20%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          + A +G+A Q   +Q+IS NIAN RTTG       ++++T  F+++++      V+++G 
Sbjct: 5  YTAATGMAAQELNVQVISNNIANMRTTG-------FKKQTAQFQDLIYD----HVRRVGA 53

Query: 69 ---DQSTFV 74
             DQ T +
Sbjct: 54 QASDQGTIL 62


>gi|332284021|ref|YP_004415932.1| flagellar basal body rod protein FlgG [Pusillimonas sp. T7-7]
 gi|330427974|gb|AEC19308.1| flagellar basal body rod protein FlgG [Pusillimonas sp. T7-7]
          Length = 261

 Score = 38.9 bits (89), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  TTG       ++R   +FE++M+
Sbjct: 1  MIRSLWIAKTGLESQQTNMDVISNNLANVNTTG-------FKRSRANFEDLMY 46


>gi|39936961|ref|NP_949237.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
          CGA009]
 gi|192292789|ref|YP_001993394.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
          TIE-1]
 gi|39650818|emb|CAE29341.1| putative flagellar basal-body rod protein flgg (distal rod
          protein) [Rhodopseudomonas palustris CGA009]
 gi|192286538|gb|ACF02919.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
          TIE-1]
          Length = 262

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 14/69 (20%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          + A +G+A Q   +Q+IS NIAN RTTG       ++++T  F+++++      V+++G 
Sbjct: 5  YTAATGMAAQELNVQVISNNIANMRTTG-------FKKQTAQFQDLIYD----HVRRVGA 53

Query: 69 ---DQSTFV 74
             DQ T +
Sbjct: 54 QASDQGTIL 62


>gi|316932823|ref|YP_004107805.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
          DX-1]
 gi|315600537|gb|ADU43072.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
          DX-1]
          Length = 262

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 14/69 (20%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          + A +G+A Q   +Q+IS NIAN RTTG       ++++T  F+++++      V+++G 
Sbjct: 5  YTAATGMAAQELNVQVISNNIANMRTTG-------FKKQTAQFQDLIYD----HVRRVGA 53

Query: 69 ---DQSTFV 74
             DQ T +
Sbjct: 54 QASDQGTIL 62


>gi|238916189|ref|YP_002929706.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
          27750]
 gi|238871549|gb|ACR71259.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
          27750]
          Length = 256

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 14/64 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK---TISFEEVMHGSGG 60
          ++   + A SGL VQ  R+ ++S N+ANA TTG       Y+++   T SF++V     G
Sbjct: 1  MVKGLYTAYSGLTVQQKRLDVVSNNLANATTTG-------YKKEGLTTQSFKDVY----G 49

Query: 61 VRVK 64
          ++VK
Sbjct: 50 IKVK 53


>gi|254470407|ref|ZP_05083811.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
 gi|211960718|gb|EEA95914.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
          Length = 260

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          HIA +G+  Q   +++IS N+AN RTTG       Y+R+   F+++++
Sbjct: 5  HIAATGMKAQELNVEVISNNVANMRTTG-------YKRQRADFQDLLY 45


>gi|90415316|ref|ZP_01223250.1| flagellar basal-body rod protein FlgG (distal rod protein)
          [marine gamma proteobacterium HTCC2207]
 gi|90332639|gb|EAS47809.1| flagellar basal-body rod protein FlgG (distal rod protein)
          [marine gamma proteobacterium HTCC2207]
          Length = 261

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          AS  IA +GL  Q  RM +IS N+AN  TTG       +++    FE++++
Sbjct: 3  ASLWIAKTGLTAQQTRMSVISNNLANVNTTG-------FKKDRAVFEDLLY 46


>gi|291334316|gb|ADD93977.1| flagellar basal body rod protein FlgG [uncultured marine
          bacterium MedDCM-OCT-S09-C247]
          Length = 257

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          H+A +GL  Q  +MQ+I+ N+AN  TTG       ++R   +FE + +
Sbjct: 2  HVAKTGLNAQQYKMQVIANNLANVNTTG-------FKRDRANFESLFY 42


>gi|254437698|ref|ZP_05051192.1| flagellar basal-body rod protein FlgG [Octadecabacter antarcticus
          307]
 gi|198253144|gb|EDY77458.1| flagellar basal-body rod protein FlgG [Octadecabacter antarcticus
          307]
          Length = 257

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 12/64 (18%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          H+A +GL  Q  RMQ+I+ N++N  T G       ++   ++FE +++     +V + G 
Sbjct: 2  HVAKTGLNAQQTRMQVIANNLSNLNTVG-------FKSDRVNFESLLY-----QVSRAGG 49

Query: 69 DQST 72
          DQ++
Sbjct: 50 DQTS 53


>gi|58039490|ref|YP_191454.1| flagellar hook protein FlgE [Gluconobacter oxydans 621H]
 gi|58001904|gb|AAW60798.1| Flagellar hook protein FlgE [Gluconobacter oxydans 621H]
          Length = 411

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M  +I + H A SGL  QS     +S NIAN++TTG       Y+  T SFE+
Sbjct: 1  MSSIINAVHTAVSGLNAQSHAFTDLSNNIANSQTTG-------YKASTTSFED 46


>gi|121596117|ref|YP_988013.1| hypothetical protein Ajs_3830 [Acidovorax sp. JS42]
 gi|120608197|gb|ABM43937.1| protein of unknown function DUF1078 domain protein [Acidovorax sp.
           JS42]
          Length = 538

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 10/74 (13%)

Query: 68  VDQSTFVEEFDPGHPVANA----------SGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V  + +VE ++ G PV  A          +G ++  NV++  E  +M    R Y AN QT
Sbjct: 464 VGGNNWVETYESGQPVMGAPTDGNFGALRAGALEDSNVDLTAELVNMMTAQRAYQANAQT 523

Query: 118 IKQSHDMMTTTLDL 131
           IK    +M+T ++L
Sbjct: 524 IKTQDQVMSTLVNL 537


>gi|92116936|ref|YP_576665.1| flagellar basal body rod protein FlgG [Nitrobacter hamburgensis
          X14]
 gi|91799830|gb|ABE62205.1| Flagellar basal-body rod FlgG [Nitrobacter hamburgensis X14]
          Length = 262

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 14/69 (20%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          + A +G+A Q   +Q+IS NIAN RTTG       Y+++  +F+++++      V+++G 
Sbjct: 5  YTAATGMAAQELNVQVISNNIANLRTTG-------YKKQRAAFQDLIYD----HVRRVGA 53

Query: 69 ---DQSTFV 74
             DQ T +
Sbjct: 54 QASDQGTIL 62


>gi|170742325|ref|YP_001770980.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46]
 gi|168196599|gb|ACA18546.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46]
          Length = 263

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + A +G+A Q   +Q+IS NIAN RTTG       Y+R+   F+++++
Sbjct: 5  YAAATGMAAQELNVQVISNNIANLRTTG-------YKRQQAHFQDLLY 45


>gi|220924578|ref|YP_002499880.1| flagellar basal-body rod protein FlgG [Methylobacterium nodulans
          ORS 2060]
 gi|219949185|gb|ACL59577.1| flagellar basal-body rod protein FlgG [Methylobacterium nodulans
          ORS 2060]
          Length = 263

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + A +G+A Q   +Q+IS NIAN RTTG       Y+R+   F+++++
Sbjct: 5  YAAATGMAAQELNVQVISNNIANLRTTG-------YKRQQAHFQDLLY 45


>gi|307823533|ref|ZP_07653762.1| flagellar basal-body rod protein FlgG [Methylobacter
          tundripaludum SV96]
 gi|307735518|gb|EFO06366.1| flagellar basal-body rod protein FlgG [Methylobacter
          tundripaludum SV96]
          Length = 262

 Score = 38.1 bits (87), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           +A SGL  Q  RM +IS N+AN  TTG       ++R    FE++M+
Sbjct: 7  WVAKSGLDAQQTRMAVISNNLANVNTTG-------FKRGRAVFEDLMY 47


>gi|222112272|ref|YP_002554536.1| flagellar basal body flae domain-containing protein [Acidovorax
           ebreus TPSY]
 gi|221731716|gb|ACM34536.1| flagellar basal body FlaE domain protein [Acidovorax ebreus TPSY]
          Length = 531

 Score = 38.1 bits (87), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 10/74 (13%)

Query: 68  VDQSTFVEEFDPGHPVANA----------SGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V  + +VE ++ G PV  A          +G ++  NV++  E  +M    R Y AN QT
Sbjct: 457 VGGNNWVETYESGQPVLGAPTDGNFGALRAGALEDSNVDLTAELVNMMTAQRAYQANAQT 516

Query: 118 IKQSHDMMTTTLDL 131
           IK    +M+T ++L
Sbjct: 517 IKTQDQVMSTLVNL 530


>gi|307546968|ref|YP_003899447.1| flagellar hook protein FlgE [Halomonas elongata DSM 2581]
 gi|307218992|emb|CBV44262.1| flagellar hook protein FlgE [Halomonas elongata DSM 2581]
          Length = 422

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 28/45 (62%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+V+  NV++  E  DM  T R Y AN QTIK   +++ T ++L
Sbjct: 377 SGVVESSNVDMAQELVDMIVTQRAYQANSQTIKTQDEVLQTAINL 421


>gi|284030760|ref|YP_003380691.1| hypothetical protein Kfla_2827 [Kribbella flavida DSM 17836]
 gi|283810053|gb|ADB31892.1| hypothetical protein Kfla_2827 [Kribbella flavida DSM 17836]
          Length = 266

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 14/75 (18%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST-------FVEEFD---- 78
           A  +TT   P  DP RR    FEE+   S  V+  +  +D+ST        VE+F+    
Sbjct: 74  AGPQTTAPVPADDPARRLPAGFEEIFVDSAAVQRARAVIDRSTEDAEWKSLVEQFNAPSA 133

Query: 79  PGHPVANASGIVKYP 93
           PGH   +A  + ++P
Sbjct: 134 PGH---DAPPVPRWP 145


>gi|154250381|ref|YP_001411206.1| flagellar basal-body rod protein FlgB [Fervidobacterium nodosum
          Rt17-B1]
 gi|154154317|gb|ABS61549.1| flagellar basal-body rod protein FlgB [Fervidobacterium nodosum
          Rt17-B1]
          Length = 131

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 7/47 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + L VQ  R +I ++NIANA    +TPG   Y+RK I+FEE +  S 
Sbjct: 15 TALDVQMKRQEIHAQNIANA----ETPG---YKRKYIAFEEYLQESK 54


>gi|118588735|ref|ZP_01546143.1| hypothetical protein SIAM614_18554 [Stappia aggregata IAM 12614]
 gi|118438721|gb|EAV45354.1| hypothetical protein SIAM614_18554 [Stappia aggregata IAM 12614]
          Length = 463

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 7/54 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          SGLA Q+  ++ IS N+AN++TTG       Y+R   +F +++ G G  + +++
Sbjct: 12 SGLAAQAKALENISGNVANSQTTG-------YKRLDTTFSDLVSGGGSKQAQQV 58


>gi|89902477|ref|YP_524948.1| hypothetical protein Rfer_3717 [Rhodoferax ferrireducens T118]
 gi|89347214|gb|ABD71417.1| protein of unknown function DUF1078-like [Rhodoferax ferrireducens
           T118]
          Length = 404

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 10/74 (13%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKY----------PNVNVLVETADMRETNRLYMANLQT 117
           +  +++V  +  G PV  + G+ K+           NV++  E  +M    R Y AN QT
Sbjct: 330 IGGNSWVASYTSGDPVLGSPGVGKFGALRSGALEESNVDLTAELVNMMTAQRAYQANAQT 389

Query: 118 IKQSHDMMTTTLDL 131
           IK    +M+T ++L
Sbjct: 390 IKTQDQVMSTLVNL 403


>gi|163794152|ref|ZP_02188125.1| Flagellar basal body rod protein [alpha proteobacterium BAL199]
 gi|159180766|gb|EDP65285.1| Flagellar basal body rod protein [alpha proteobacterium BAL199]
          Length = 261

 Score = 38.1 bits (87), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 7/50 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          S +IA++G+A Q   +++IS NIAN  TTG       Y+R+   F+++++
Sbjct: 3  SLNIASTGMAAQQFNVEVISNNIANMNTTG-------YKRQRAEFQDLLY 45


>gi|288962673|ref|YP_003452967.1| flagellar hook protein [Azospirillum sp. B510]
 gi|288914939|dbj|BAI76423.1| flagellar hook protein [Azospirillum sp. B510]
          Length = 427

 Score = 38.1 bits (87), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 7/47 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          SG+A QS+R+  IS+NI+N++T G       Y+R T+ F  ++   G
Sbjct: 12 SGMAAQSSRLAAISDNISNSQTVG-------YKRATVDFSTLVTAPG 51


>gi|241766922|ref|ZP_04764728.1| flagellar basal-body rod protein FlgG [Acidovorax delafieldii
          2AN]
 gi|241362626|gb|EER58474.1| flagellar basal-body rod protein FlgG [Acidovorax delafieldii
          2AN]
          Length = 259

 Score = 38.1 bits (87), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 11/68 (16%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +G++ Q  ++ +IS N+AN  TTG       Y+R    FE++++      +
Sbjct: 1  MINSLWIAKTGMSAQQTQLDVISHNLANVSTTG-------YKRNNAVFEDLIY----QNL 49

Query: 64 KKIGVDQS 71
          +++G + S
Sbjct: 50 RQVGANSS 57


>gi|188592119|ref|YP_001796717.1| flagellar basal body rod protein flgg [Cupriavidus taiwanensis
          LMG 19424]
 gi|170938493|emb|CAP63480.1| FlgG: Flagellar basal-body rod protein [Cupriavidus taiwanensis
          LMG 19424]
          Length = 261

 Score = 38.1 bits (87), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q  +M +IS N+AN  T G       ++R    FEE+M+
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNG-------FKRGRAVFEELMY 46


>gi|116694221|ref|YP_728432.1| flagellar basal body rod protein FlgG [Ralstonia eutropha H16]
 gi|113528720|emb|CAJ95067.1| flagellar basal body rod protein [Ralstonia eutropha H16]
          Length = 261

 Score = 38.1 bits (87), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q  +M +IS N+AN  T G       ++R    FEE+M+
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNG-------FKRGRAVFEELMY 46


>gi|259417834|ref|ZP_05741753.1| flagellar hook protein FlgE [Silicibacter sp. TrichCH4B]
 gi|259346740|gb|EEW58554.1| flagellar hook protein FlgE [Silicibacter sp. TrichCH4B]
          Length = 422

 Score = 37.7 bits (86), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 14/60 (23%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVRVKK 65
          +GLA  S R+  IS+NIANA T G       Y+R   SFE ++       + +GGV V  
Sbjct: 12 AGLAANSTRLAAISDNIANASTAG-------YKRVVTSFESMVISQNGGSYAAGGVSVNN 64


>gi|85715030|ref|ZP_01046015.1| hypothetical protein NB311A_11677 [Nitrobacter sp. Nb-311A]
 gi|85698227|gb|EAQ36099.1| hypothetical protein NB311A_11677 [Nitrobacter sp. Nb-311A]
          Length = 620

 Score = 37.7 bits (86), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L ++  IA SGL    A + I+S N+ANA    +TPG   Y  +T+  ++++ GS G  V
Sbjct: 3  LSSALSIAMSGLRANQAALSIVSGNVANA----NTPG---YVAQTLVQDQIVTGSTGSGV 55

Query: 64 KKIGVDQS 71
          + IGV ++
Sbjct: 56 RIIGVSRT 63


>gi|315122284|ref|YP_004062773.1| flagellar hook protein FlgE [Candidatus Liberibacter solanacearum
          CLso-ZC1]
 gi|313495686|gb|ADR52285.1| flagellar hook protein FlgE [Candidatus Liberibacter solanacearum
          CLso-ZC1]
          Length = 422

 Score = 37.7 bits (86), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 14/69 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          ++ +   A SG+  QS R+  +S+NIAN  T G       Y+R  +SF  ++       H
Sbjct: 3  ILGTMKTAMSGMDAQSNRVSAVSDNIANVNTIG-------YKRTAVSFSSLVFPPAAGCH 55

Query: 57 GSGGVRVKK 65
           SGGV V +
Sbjct: 56 TSGGVAVSE 64


>gi|85715052|ref|ZP_01046037.1| hypothetical protein NB311A_11787 [Nitrobacter sp. Nb-311A]
 gi|85698249|gb|EAQ36121.1| hypothetical protein NB311A_11787 [Nitrobacter sp. Nb-311A]
          Length = 262

 Score = 37.7 bits (86), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 11/63 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          + A +G+A Q   +Q+IS NIAN RTTG       Y+++  +F+++++      V+++G 
Sbjct: 5  YTAATGMAAQELNVQVISNNIANLRTTG-------YKKQRAAFQDLIYD----HVRRVGA 53

Query: 69 DQS 71
            S
Sbjct: 54 QAS 56


>gi|99082779|ref|YP_614933.1| hypothetical protein TM1040_2939 [Ruegeria sp. TM1040]
 gi|99039059|gb|ABF65671.1| Flagellar hook protein flgE [Ruegeria sp. TM1040]
          Length = 422

 Score = 37.7 bits (86), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 7/56 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +GLA  S R+  IS+NIAN+ T G       Y+R   SFE ++    G R    GV
Sbjct: 12 AGLAANSTRLAAISDNIANSSTAG-------YKRVVTSFESMVISQSGGRYAAGGV 60


>gi|326791546|ref|YP_004309367.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum DSM
           5427]
 gi|326542310|gb|ADZ84169.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum DSM
           5427]
          Length = 122

 Score = 37.7 bits (86), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 22/136 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------G 57
           + +   + N+ ++    R  IISENI+N     DTPG   Y+RK + FE ++       G
Sbjct: 3   IFSDIDLMNTAISATMLRKGIISENISNV----DTPG---YKRKDVRFETILEKEIKKGG 55

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + G+ +K I         E +     AN+S  +   NV++ VE A+  + +  Y A +  
Sbjct: 56  TAGLNLKDI---------EPEIYTDYANSSYRLDGNNVDIDVEMAEEAKVSARYNALVTR 106

Query: 118 IKQSHDMMTTTLDLLR 133
           +       +T L  L+
Sbjct: 107 VNSQLGRFSTVLQNLK 122


>gi|323697455|ref|ZP_08109367.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           sp. ND132]
 gi|323457387|gb|EGB13252.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans ND132]
          Length = 108

 Score = 37.7 bits (86), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 19/120 (15%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           S L+  S   ++ + NIAN  T       D +R   +S E    G GG      GV+ ++
Sbjct: 7   SALSALSTVQEVSANNIANMNT-------DGFRAGAVSLE---SGPGGQ-----GVEVAS 51

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             E   PG  +      V+  N +V  E  DM  T+R + AN   I+ S +M    LD++
Sbjct: 52  ITESTAPGAFING----VETSNTDVGREMVDMIVTSRAFEANTTFIRASEEMTGHLLDMI 107


>gi|120613061|ref|YP_972739.1| flagellar basal-body rod protein FlgG [Acidovorax citrulli
          AAC00-1]
 gi|326319099|ref|YP_004236771.1| flagellar basal-body rod protein FlgG [Acidovorax avenae subsp.
          avenae ATCC 19860]
 gi|120591525|gb|ABM34965.1| flagellar basal-body rod protein FlgG [Acidovorax citrulli
          AAC00-1]
 gi|323375935|gb|ADX48204.1| flagellar basal-body rod protein FlgG [Acidovorax avenae subsp.
          avenae ATCC 19860]
          Length = 260

 Score = 37.7 bits (86), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +G++ Q  ++ +IS N+AN  TTG       Y+R    FE++++
Sbjct: 1  MINSLWIAKTGMSAQQTQLDVISHNLANVSTTG-------YKRNNAVFEDLIY 46


>gi|114320059|ref|YP_741742.1| flagellar basal-body rod protein FlgG [Alkalilimnicola ehrlichii
          MLHE-1]
 gi|114226453|gb|ABI56252.1| flagellar basal-body rod protein FlgG [Alkalilimnicola ehrlichii
          MLHE-1]
          Length = 261

 Score = 37.7 bits (86), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           +A +GL  Q  RMQ++S N+AN  TTG       +++   +FE++++
Sbjct: 6  WVAKTGLDAQQTRMQVVSNNLANVNTTG-------FKKDRANFEDLIY 46


>gi|21242725|ref|NP_642307.1| flagellar basal body rod protein FlgG [Xanthomonas axonopodis pv.
          citri str. 306]
 gi|78047584|ref|YP_363759.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
 gi|294624042|ref|ZP_06702805.1| flagellar biosynthesis cell-distal portion of basal-body rod
          [Xanthomonas fuscans subsp. aurantifolii str. ICPB
          11122]
 gi|294665577|ref|ZP_06730858.1| flagellar biosynthesis cell-distal portion of basal-body rod
          [Xanthomonas fuscans subsp. aurantifolii str. ICPB
          10535]
 gi|325927973|ref|ZP_08189194.1| flagellar basal-body rod protein FlgG [Xanthomonas perforans
          91-118]
 gi|21108201|gb|AAM36843.1| flagellar biosynthesis cell-distal portion of basal-body rod
          [Xanthomonas axonopodis pv. citri str. 306]
 gi|78036014|emb|CAJ23705.1| flagella basal body rod protein [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
 gi|292601661|gb|EFF45635.1| flagellar biosynthesis cell-distal portion of basal-body rod
          [Xanthomonas fuscans subsp. aurantifolii str. ICPB
          11122]
 gi|292604675|gb|EFF48045.1| flagellar biosynthesis cell-distal portion of basal-body rod
          [Xanthomonas fuscans subsp. aurantifolii str. ICPB
          10535]
 gi|325541658|gb|EGD13179.1| flagellar basal-body rod protein FlgG [Xanthomonas perforans
          91-118]
          Length = 261

 Score = 37.7 bits (86), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           +A +GL  Q  RM +IS N+AN  TTG       ++R   +FE++++
Sbjct: 6  WVAKTGLDAQQTRMSVISNNLANTNTTG-------FKRDRAAFEDLLY 46


>gi|21231395|ref|NP_637312.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
          campestris str. ATCC 33913]
 gi|66768552|ref|YP_243314.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
          campestris str. 8004]
 gi|188991639|ref|YP_001903649.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
          campestris str. B100]
 gi|325916945|ref|ZP_08179189.1| flagellar basal-body rod protein FlgG [Xanthomonas vesicatoria
          ATCC 35937]
 gi|21113060|gb|AAM41236.1| flagellar biosynthesis, cell-distal portion of basal-body rod
          [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66573884|gb|AAY49294.1| flagellar biosynthesis, cell-distal portion of basal-body rod
          [Xanthomonas campestris pv. campestris str. 8004]
 gi|167733399|emb|CAP51600.1| unnamed protein product [Xanthomonas campestris pv. campestris]
 gi|325536848|gb|EGD08600.1| flagellar basal-body rod protein FlgG [Xanthomonas vesicatoria
          ATCC 35937]
          Length = 261

 Score = 37.7 bits (86), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           +A +GL  Q  RM +IS N+AN  TTG       ++R   +FE++++
Sbjct: 6  WVAKTGLDAQQTRMSVISNNLANTNTTG-------FKRDRAAFEDLLY 46


>gi|325923276|ref|ZP_08184949.1| flagellar basal-body rod protein FlgG [Xanthomonas gardneri ATCC
          19865]
 gi|325546203|gb|EGD17384.1| flagellar basal-body rod protein FlgG [Xanthomonas gardneri ATCC
          19865]
          Length = 261

 Score = 37.7 bits (86), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           +A +GL  Q  RM +IS N+AN  TTG       ++R   +FE++++
Sbjct: 6  WVAKTGLDAQQTRMSVISNNLANTNTTG-------FKRDRAAFEDLLY 46


>gi|289666050|ref|ZP_06487631.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
          vasculorum NCPPB702]
 gi|289670510|ref|ZP_06491585.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
          musacearum NCPPB4381]
          Length = 261

 Score = 37.7 bits (86), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           +A +GL  Q  RM +IS N+AN  TTG       ++R   +FE++++
Sbjct: 6  WVAKTGLDAQQTRMSVISNNLANTNTTG-------FKRDRAAFEDLLY 46


>gi|119477951|ref|ZP_01618051.1| Flagellar basal body rod protein [marine gamma proteobacterium
          HTCC2143]
 gi|119448864|gb|EAW30106.1| Flagellar basal body rod protein [marine gamma proteobacterium
          HTCC2143]
          Length = 261

 Score = 37.7 bits (86), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           I+ +GL+ Q  R+  IS N+ANA T G       Y+R ++ FE++++
Sbjct: 6  WISKTGLSAQDTRLATISNNLANAATVG-------YKRDSVVFEDLLY 46


>gi|84624090|ref|YP_451462.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
          oryzae MAFF 311018]
 gi|161898985|ref|YP_201214.2| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
          oryzae KACC10331]
 gi|166712060|ref|ZP_02243267.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
          oryzicola BLS256]
 gi|188576758|ref|YP_001913687.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|188576950|ref|YP_001913879.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|84368030|dbj|BAE69188.1| flagellar biosynthesis cell-distal portion of basal-body rod
          [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188521210|gb|ACD59155.1| flagellar basal-body rod protein FlgG [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|188521402|gb|ACD59347.1| flagellar basal-body rod protein FlgG [Xanthomonas oryzae pv.
          oryzae PXO99A]
          Length = 261

 Score = 37.7 bits (86), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           +A +GL  Q  RM +IS N+AN  TTG       ++R   +FE++++
Sbjct: 6  WVAKTGLDAQQTRMSVISNNLANTNTTG-------FKRDRAAFEDLLY 46


>gi|182680457|ref|YP_001834603.1| flagellar hook protein FlgE [Beijerinckia indica subsp. indica
          ATCC 9039]
 gi|182636340|gb|ACB97114.1| flagellar basal body FlaE domain protein [Beijerinckia indica
          subsp. indica ATCC 9039]
          Length = 415

 Score = 37.7 bits (86), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 14/57 (24%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SGGVR 62
          SG+A QS ++  +S+NIAN+ TTG       Y++    FE +++G       +GGV+
Sbjct: 12 SGMAAQSNKLSAVSDNIANSNTTG-------YKQADTEFETLVNGLNKTSYDAGGVK 61


>gi|296534169|ref|ZP_06896661.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis ATCC
           49957]
 gi|296265505|gb|EFH11638.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis ATCC
           49957]
          Length = 500

 Score = 37.4 bits (85), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 19/110 (17%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI--GV 68
           A SGL + + +++  ++NIANA T G       Y RKT+S E V   +GGVR  +    V
Sbjct: 10  ATSGLRLTTRQLEQSAQNIANADTAG-------YTRKTVSGEAVT--TGGVRTGEAQRAV 60

Query: 69  D-----QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
           D     Q+      + G  +ANA+     P   +  +T+D R+T  L  A
Sbjct: 61  DTALRNQALKARSAEAGASLANAT---LSPLAGLQGDTSDGRDTAGLISA 107


>gi|58426792|gb|AAW75829.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 341

 Score = 37.4 bits (85), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 7/47 (14%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           +A +GL  Q  RM +IS N+AN  TTG       ++R   +FE++++
Sbjct: 87  VAKTGLDAQQTRMSVISNNLANTNTTG-------FKRDRAAFEDLLY 126


>gi|84502400|ref|ZP_01000536.1| flagellar basal-body rod protein flgB [Oceanicola batsensis
          HTCC2597]
 gi|84389212|gb|EAQ02009.1| flagellar basal-body rod protein flgB [Oceanicola batsensis
          HTCC2597]
          Length = 133

 Score = 37.4 bits (85), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 8/46 (17%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVRVK 64
          AR Q+I++N+AN+    DTPG   Y+ + +S F EV+ G+GG  V+
Sbjct: 21 ARQQVIAQNVANS----DTPG---YKARDVSNFAEVLRGAGGAGVR 59


>gi|296103611|ref|YP_003613757.1| Flagellar basal body FlaE domain protein [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
 gi|295058070|gb|ADF62808.1| Flagellar basal body FlaE domain protein [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
          Length = 399

 Score = 37.4 bits (85), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 7/59 (11%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS 71
          SGL+  +  + ++  NIAN++T G       ++  ++SF ++  GS G+ V+  GV Q+
Sbjct: 8  SGLSAAAKALDVVGNNIANSQTVG-------FKAGSVSFADIFAGSTGMGVQVAGVSQN 59


>gi|320354701|ref|YP_004196040.1| hypothetical protein Despr_2613 [Desulfobulbus propionicus DSM
           2032]
 gi|320123203|gb|ADW18749.1| protein of unknown function DUF1078 domain protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 117

 Score = 37.4 bits (85), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 13/128 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I+    A SG    SA+++  + NIAN  T G       YR+  +     +  S    V
Sbjct: 1   MISGIQSALSGAQAFSAKIESNAHNIANLNTEG-------YRKSRVVLSAGVAQSVQATV 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            ++        EE   G+ V   S      NV++  E  D+      Y ANL+T++ S +
Sbjct: 54  GRVDAPGPVVNEETAQGYAVRELS------NVDLGEEIPDLMRNTHGYAANLRTVQVSDN 107

Query: 124 MMTTTLDL 131
           M+ T LD+
Sbjct: 108 MLQTLLDI 115


>gi|241113584|ref|YP_002973419.1| protein of unknown function DUF1078 domain protein [Rhizobium
          leguminosarum bv. trifolii WSM1325]
 gi|240861792|gb|ACS59458.1| protein of unknown function DUF1078 domain protein [Rhizobium
          leguminosarum bv. trifolii WSM1325]
          Length = 430

 Score = 37.0 bits (84), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 14/68 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG++ Q+ R+  +S+NIANA TTG       Y+  + SF  ++       +
Sbjct: 3  IFGSMKTAVSGMSAQANRLSTVSDNIANANTTG-------YKAVSTSFSSLVLPSSSGNY 55

Query: 57 GSGGVRVK 64
           SGGV+  
Sbjct: 56 NSGGVQTS 63


>gi|317492426|ref|ZP_07950855.1| flagellar basal-body rod protein FlgG [Enterobacteriaceae
          bacterium 9_2_54FAA]
 gi|316919765|gb|EFV41095.1| flagellar basal-body rod protein FlgG [Enterobacteriaceae
          bacterium 9_2_54FAA]
          Length = 260

 Score = 37.0 bits (84), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S +IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++M+
Sbjct: 1  MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLMY 46


>gi|116248740|ref|YP_764581.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. viciae
          3841]
 gi|115253390|emb|CAK11778.1| putative flagellar hook protein flgE [Rhizobium leguminosarum bv.
          viciae 3841]
          Length = 430

 Score = 37.0 bits (84), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 14/68 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG++ Q+ R+  +S+NIANA TTG       Y+  + SF  ++       +
Sbjct: 3  IFGSMKTAVSGMSAQANRLSTVSDNIANANTTG-------YKAVSTSFSSLVLPSSSGNY 55

Query: 57 GSGGVRVK 64
           SGGV+  
Sbjct: 56 NSGGVQTS 63


>gi|86750925|ref|YP_487421.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          HaA2]
 gi|86573953|gb|ABD08510.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
          HaA2]
          Length = 623

 Score = 37.0 bits (84), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           IA +GL    A M ++S N+ANA    +TPG   Y RKT++    + G  G  V   GV
Sbjct: 8  SIAMAGLRANQASMSLVSSNVANA----ETPG---YVRKTVNQVTTLSGPSGSGVSITGV 60

Query: 69 DQ 70
          ++
Sbjct: 61 NR 62


>gi|300716220|ref|YP_003741023.1| flagellar basal-body rod protein [Erwinia billingiae Eb661]
 gi|299062056|emb|CAX59172.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661]
          Length = 260

 Score = 37.0 bits (84), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMY 46


>gi|2494522|sp|P70911|FLGC_BORHE RecName: Full=Flagellar basal-body rod protein flgC
 gi|1621621|gb|AAB51474.1| flagellar rod protein FLgC [Borrelia hermsii]
          Length = 59

 Score = 37.0 bits (84), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          L +S + A++GL  Q  R+ +I+ NIAN  TT  + G   YRR+ + F
Sbjct: 3  LFSSINTASTGLTAQRLRLDVIANNIANVETTRTSEGGS-YRRQRVIF 49


>gi|157160605|ref|YP_001457923.1| flagellar basal body rod protein FlgG [Escherichia coli HS]
 gi|170020526|ref|YP_001725480.1| flagellar basal body rod protein FlgG [Escherichia coli ATCC
          8739]
 gi|312971215|ref|ZP_07785393.1| flagellar basal-body rod protein FlgG [Escherichia coli 1827-70]
 gi|157066285|gb|ABV05540.1| flagellar basal-body rod protein FlgG [Escherichia coli HS]
 gi|169755454|gb|ACA78153.1| flagellar basal-body rod protein FlgG [Escherichia coli ATCC
          8739]
 gi|310336417|gb|EFQ01603.1| flagellar basal-body rod protein FlgG [Escherichia coli 1827-70]
          Length = 260

 Score = 37.0 bits (84), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       Y+R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------YKRQRAVFEDLLY 46


>gi|227328340|ref|ZP_03832364.1| flagellar basal body rod protein FlgG [Pectobacterium carotovorum
          subsp. carotovorum WPP14]
 gi|253688970|ref|YP_003018160.1| flagellar basal-body rod protein FlgG [Pectobacterium carotovorum
          subsp. carotovorum PC1]
 gi|251755548|gb|ACT13624.1| flagellar basal-body rod protein FlgG [Pectobacterium carotovorum
          subsp. carotovorum PC1]
          Length = 260

 Score = 37.0 bits (84), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMY 46


>gi|50120641|ref|YP_049808.1| flagellar basal body rod protein FlgG [Pectobacterium
          atrosepticum SCRI1043]
 gi|49611167|emb|CAG74613.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
          SCRI1043]
          Length = 260

 Score = 37.0 bits (84), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMY 46


>gi|46203395|ref|ZP_00051590.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum
          magnetotacticum MS-1]
          Length = 293

 Score = 37.0 bits (84), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          LI       SG+  QS R+  ++ENI NA TTG       Y+R +  F  ++  SG V  
Sbjct: 3  LIGVLRTGVSGMNAQSNRISTVAENIQNANTTG-------YKRTSAEFSSLLLDSGDVGT 55

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
             G  ++T         P++
Sbjct: 56 YNSGAVETTLRRSIGERGPIS 76


>gi|90423017|ref|YP_531387.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
          BisB18]
 gi|90105031|gb|ABD87068.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB18]
          Length = 262

 Score = 37.0 bits (84), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 14/69 (20%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          + A +G+A Q   +Q+IS NIAN RTTG       ++++  +F+++++      V+++G 
Sbjct: 5  YTAATGMAAQELNVQVISNNIANMRTTG-------FKKQRAAFQDLIYD----HVRRVGA 53

Query: 69 ---DQSTFV 74
             DQ T +
Sbjct: 54 QASDQGTIL 62


>gi|261821155|ref|YP_003259261.1| flagellar basal body rod protein FlgG [Pectobacterium wasabiae
          WPP163]
 gi|261605168|gb|ACX87654.1| flagellar basal-body rod protein FlgG [Pectobacterium wasabiae
          WPP163]
          Length = 260

 Score = 37.0 bits (84), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMY 46


>gi|227112523|ref|ZP_03826179.1| flagellar basal body rod protein FlgG [Pectobacterium carotovorum
          subsp. brasiliensis PBR1692]
          Length = 260

 Score = 37.0 bits (84), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMY 46


>gi|292492365|ref|YP_003527804.1| flagellar basal-body rod protein FlgG [Nitrosococcus halophilus
          Nc4]
 gi|291580960|gb|ADE15417.1| flagellar basal-body rod protein FlgG [Nitrosococcus halophilus
          Nc4]
          Length = 261

 Score = 37.0 bits (84), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           IA +GL  Q  RM +IS N+AN  TTG       ++R    FE++++
Sbjct: 6  WIAKTGLDAQQTRMAVISNNLANVNTTG-------FKRGRAVFEDLLY 46


>gi|225375330|ref|ZP_03752551.1| hypothetical protein ROSEINA2194_00955 [Roseburia inulinivorans
          DSM 16841]
 gi|225212819|gb|EEG95173.1| hypothetical protein ROSEINA2194_00955 [Roseburia inulinivorans
          DSM 16841]
          Length = 550

 Score = 37.0 bits (84), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 20/78 (25%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
          ++ S + A SGL     RM +I  NIAN  T         ++  +++F ++++       
Sbjct: 1  MMRSMYSAVSGLKTHQTRMDVIGNNIANVNTV-------AFKSSSVTFSDILYQTTSNAS 53

Query: 57 ------GSGGVRVKKIGV 68
                G+GGV  K+IG+
Sbjct: 54 GANATTGTGGVNAKQIGL 71


>gi|322806996|emb|CBZ04566.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
          H04402 065]
          Length = 77

 Score = 37.0 bits (84), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
           I+ SGL+ +  RM  I+ NIANA TT  T    PY+RK   F
Sbjct: 9  RISASGLSAERLRMDTIASNIANA-TTTRTENGGPYKRKIAVF 50


>gi|285018207|ref|YP_003375918.1| flagellar basal-body rod protein flgg [Xanthomonas albilineans
          GPE PC73]
 gi|283473425|emb|CBA15930.1| probable flagellar basal-body rod protein flgg [Xanthomonas
          albilineans]
          Length = 261

 Score = 37.0 bits (84), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           +A +G+  Q  RM ++S N+AN  TTG       ++R   SFE++++
Sbjct: 6  WVAKTGMDAQQTRMSVVSNNLANTSTTG-------FKRDRASFEDLLY 46


>gi|319944133|ref|ZP_08018411.1| flagellar basal-body rod protein FlgG [Lautropia mirabilis ATCC
          51599]
 gi|319742627|gb|EFV95036.1| flagellar basal-body rod protein FlgG [Lautropia mirabilis ATCC
          51599]
          Length = 260

 Score = 37.0 bits (84), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q  +M +IS N+AN  T G       Y+R    FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISHNLANVSTNG-------YKRSQAVFEDLIY 46


>gi|307131607|ref|YP_003883623.1| flagellar basal-body rod protein flgG [Dickeya dadantii 3937]
 gi|306529136|gb|ADM99066.1| Flagellar basal-body rod protein flgG [Dickeya dadantii 3937]
          Length = 260

 Score = 37.0 bits (84), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMY 46


>gi|330826757|ref|YP_004390060.1| flagellar basal-body rod protein FlgG [Alicycliphilus
          denitrificans K601]
 gi|329312129|gb|AEB86544.1| flagellar basal-body rod protein FlgG [Alicycliphilus
          denitrificans K601]
          Length = 260

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +G++ Q  ++ +IS N+AN  TTG       ++R +  FE++++
Sbjct: 1  MINSLWIAKTGMSAQQTQLDVISHNLANVSTTG-------FKRNSAVFEDLIY 46


>gi|294013088|ref|YP_003546548.1| flagellar basal-body rod protein FlgG [Sphingobium japonicum
          UT26S]
 gi|292676418|dbj|BAI97936.1| flagellar basal-body rod protein FlgG [Sphingobium japonicum
          UT26S]
          Length = 262

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+ H+A +GL  Q+ +M++I+ N+AN  TTG       ++R    FE + +
Sbjct: 4  AALHVARTGLDAQNTKMRVIANNLANVNTTG-------FKRDRADFETLAY 47


>gi|251789170|ref|YP_003003891.1| flagellar basal-body rod protein FlgG [Dickeya zeae Ech1591]
 gi|247537791|gb|ACT06412.1| flagellar basal-body rod protein FlgG [Dickeya zeae Ech1591]
          Length = 260

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMY 46


>gi|271500068|ref|YP_003333093.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech586]
 gi|270343623|gb|ACZ76388.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech586]
          Length = 260

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMY 46


>gi|319764541|ref|YP_004128478.1| flagellar basal-body rod protein flgg [Alicycliphilus
          denitrificans BC]
 gi|317119102|gb|ADV01591.1| flagellar basal-body rod protein FlgG [Alicycliphilus
          denitrificans BC]
          Length = 260

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +G++ Q  ++ +IS N+AN  TTG       ++R +  FE++++
Sbjct: 1  MINSLWIAKTGMSAQQTQLDVISHNLANVSTTG-------FKRNSAVFEDLIY 46


>gi|75675293|ref|YP_317714.1| hypothetical protein Nwi_1100 [Nitrobacter winogradskyi Nb-255]
 gi|74420163|gb|ABA04362.1| Protein of unknown function DUF1078 [Nitrobacter winogradskyi
          Nb-255]
          Length = 622

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L ++  IA SGL    A + I+S N+ANA    +TPG   Y  +T+  ++V+ G  G  V
Sbjct: 3  LSSALSIAMSGLRANQAALSIVSGNVANA----NTPG---YVAQTLVQDQVVTGGMGSGV 55

Query: 64 KKIGVDQS 71
          + IGV+++
Sbjct: 56 RVIGVNRT 63


>gi|4928060|gb|AAD33398.1|AF129422_1 flagellar hook protein FlgE [Sinorhizobium meliloti]
          Length = 396

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 14/59 (23%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVRVK 64
          SG+  QS R+  ++ENIANA TTG       Y+R +  F  ++       + SGGV+ +
Sbjct: 6  SGMNAQSNRLSTVAENIANANTTG-------YKRASTEFSSMILPSGNGSYNSGGVQTE 57


>gi|150395503|ref|YP_001325970.1| flagellar hook protein FlgE [Sinorhizobium medicae WSM419]
 gi|150027018|gb|ABR59135.1| flagellar basal body FlaE domain protein [Sinorhizobium medicae
          WSM419]
          Length = 402

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 14/59 (23%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVRVK 64
          SG+  QS R+  ++ENIANA TTG       Y+R +  F  ++       + SGGV+ +
Sbjct: 12 SGMNAQSNRLSTVAENIANANTTG-------YKRASTEFSSMILPSGNGAYNSGGVQTE 63


>gi|73539452|ref|YP_299819.1| flagellar basal body rod protein FlgG [Ralstonia eutropha JMP134]
 gi|72122789|gb|AAZ64975.1| Protein of unknown function DUF1078 [Ralstonia eutropha JMP134]
          Length = 261

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q  +M +IS N+AN  T G       ++R    FE++M+
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNG-------FKRGRAVFEDLMY 46


>gi|323700469|ref|ZP_08112381.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
 gi|323460401|gb|EGB16266.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
          ND132]
          Length = 516

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 11/79 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGVRV 63
           S +   SGL  QS    ++S N+AN+ TTG       Y+  +I+FE+V + +   G  +
Sbjct: 5  GSMYTGISGLQAQSQATSVVSNNLANSTTTG-------YKSVSIAFEDVFYSTVYAGGSL 57

Query: 64 KKI--GVDQSTFVEEFDPG 80
           ++  GV  S+   ++  G
Sbjct: 58 GQVGNGVTTSSLTTDYSQG 76


>gi|289612744|emb|CBI60033.1| unnamed protein product [Sordaria macrospora]
          Length = 90

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 31/57 (54%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +DP +P+A+A G V    V+   E  DM +  R Y  N++ +  +  ++T TL L R
Sbjct: 34  YDPSNPLADAEGNVWEAAVDEPRELVDMLDAARTYQNNVEVMSTAKSLITETLRLGR 90


>gi|115523523|ref|YP_780434.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          BisA53]
 gi|115517470|gb|ABJ05454.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris BisA53]
          Length = 629

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           IA +GL    A M ++S N+ANA    +TPG   Y RKTI       GS G  V+  GV
Sbjct: 8  SIAMAGLRANQASMSLVSSNVANA----ETPG---YVRKTIDQVTTNSGSVGSGVRVYGV 60

Query: 69 DQ 70
          ++
Sbjct: 61 NR 62


>gi|264676572|ref|YP_003276478.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni
          CNB-2]
 gi|299531284|ref|ZP_07044694.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni
          S44]
 gi|262207084|gb|ACY31182.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni
          CNB-2]
 gi|298720691|gb|EFI61638.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni
          S44]
          Length = 260

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +G+  Q  ++ +IS N+AN  TTG       Y+R    FE++++
Sbjct: 1  MINSLFIAKTGMEAQQTQLDVISHNLANVSTTG-------YKRANAVFEDLIY 46


>gi|254521223|ref|ZP_05133278.1| flagellar basal-body rod protein FlgG [Stenotrophomonas sp.
          SKA14]
 gi|219718814|gb|EED37339.1| flagellar basal-body rod protein FlgG [Stenotrophomonas sp.
          SKA14]
          Length = 257

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           IA +GL  Q  RM ++S N+AN  TTG       +++   SFE++++
Sbjct: 2  WIAKTGLDAQQMRMSVVSNNLANTNTTG-------FKQDRASFEDLLY 42


>gi|307318929|ref|ZP_07598360.1| fagellar hook-basal body protein [Sinorhizobium meliloti AK83]
 gi|306895343|gb|EFN26098.1| fagellar hook-basal body protein [Sinorhizobium meliloti AK83]
          Length = 402

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 14/59 (23%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVRVK 64
          SG+  QS R+  ++ENIANA TTG       Y+R +  F  ++       + SGGV+ +
Sbjct: 12 SGMNAQSNRLSTVAENIANANTTG-------YKRASTEFSSMILPSGNGSYNSGGVQTE 63


>gi|190574261|ref|YP_001972106.1| flagellar basal body rod protein FlgG [Stenotrophomonas
          maltophilia K279a]
 gi|194365678|ref|YP_002028288.1| flagellar basal body rod protein FlgG [Stenotrophomonas
          maltophilia R551-3]
 gi|190012183|emb|CAQ45806.1| putative flagellar basal-body rod protein [Stenotrophomonas
          maltophilia K279a]
 gi|194348482|gb|ACF51605.1| flagellar basal-body rod protein FlgG [Stenotrophomonas
          maltophilia R551-3]
          Length = 261

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           IA +GL  Q  RM ++S N+AN  TTG       +++   SFE++++
Sbjct: 6  WIAKTGLDAQQMRMSVVSNNLANTNTTG-------FKQDRASFEDLLY 46


>gi|221069320|ref|ZP_03545425.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni
          KF-1]
 gi|220714343|gb|EED69711.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni
          KF-1]
          Length = 260

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +G+  Q  ++ +IS N+AN  TTG       Y+R    FE++++
Sbjct: 1  MINSLFIAKTGMEAQQTQLDVISHNLANVSTTG-------YKRANAVFEDLIY 46


>gi|320536024|ref|ZP_08036083.1| putative flagellar basal-body rod protein FlgF [Treponema
           phagedenis F0421]
 gi|320147123|gb|EFW38680.1| putative flagellar basal-body rod protein FlgF [Treponema
           phagedenis F0421]
          Length = 271

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           P  PV    G ++  NVNV+ E   M E NR Y AN +TI QS D M   L
Sbjct: 215 PDRPVT-VQGFIEASNVNVVNEMVRMIEVNRAYEANQKTI-QSEDTMMAKL 263


>gi|119385423|ref|YP_916479.1| hypothetical protein Pden_2696 [Paracoccus denitrificans PD1222]
 gi|119375190|gb|ABL70783.1| protein of unknown function DUF1078 domain protein [Paracoccus
          denitrificans PD1222]
          Length = 446

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 10/71 (14%)

Query: 5  IASAHIAN-SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSGGV 61
          I+SA  A  SGLA  S R+  IS+NIAN+ T G       Y+R   SFE ++   G GG 
Sbjct: 3  ISSALSAGVSGLAANSTRLATISDNIANSGTYG-------YKRVDTSFESMVINQGRGGG 55

Query: 62 RVKKIGVDQST 72
               GV  +T
Sbjct: 56 LYTANGVRAAT 66


>gi|15964432|ref|NP_384785.1| flagellar hook protein FlgE [Sinorhizobium meliloti 1021]
 gi|307311574|ref|ZP_07591215.1| fagellar hook-basal body protein [Sinorhizobium meliloti BL225C]
 gi|20141447|sp|Q9X5Y0|FLGE_RHIME RecName: Full=Flagellar hook protein flgE
 gi|15073609|emb|CAC45251.1| Flagellar hook protein [Sinorhizobium meliloti 1021]
 gi|306899591|gb|EFN30220.1| fagellar hook-basal body protein [Sinorhizobium meliloti BL225C]
          Length = 406

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 14/59 (23%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVRVK 64
          SG+  QS R+  ++ENIANA TTG       Y+R +  F  ++       + SGGV+ +
Sbjct: 12 SGMNAQSNRLSTVAENIANANTTG-------YKRASTEFSSMILPSGNGSYNSGGVQTE 63


>gi|316932791|ref|YP_004107773.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris DX-1]
 gi|315600505|gb|ADU43040.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris DX-1]
          Length = 623

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 7/62 (11%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           IA +GL V  A M ++S N+ANA    +TPG   Y RKT++    + G  G  V+  G+
Sbjct: 8  SIAMAGLRVNQASMSLVSSNVANA----ETPG---YVRKTVNQGVTVSGQTGTGVQVNGI 60

Query: 69 DQ 70
          ++
Sbjct: 61 NR 62


>gi|239817163|ref|YP_002946073.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
 gi|239803740|gb|ACS20807.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
          Length = 260

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++ S +IA +GL  Q  ++ ++S N+AN  TTG       ++R    FE++M+
Sbjct: 1  MMRSLYIAKTGLDAQQTQLDVVSNNLANVGTTG-------FKRSRAVFEDLMY 46


>gi|91976147|ref|YP_568806.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          BisB5]
 gi|91682603|gb|ABE38905.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
          BisB5]
          Length = 623

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           IA +GL    A M ++S N+ANA    +TPG   Y RKT+       G  G  V  IGV
Sbjct: 8  SIAMAGLRANQASMSLVSSNVANA----ETPG---YVRKTVDQITTTAGPSGSGVSIIGV 60

Query: 69 DQ 70
          ++
Sbjct: 61 NR 62


>gi|238755324|ref|ZP_04616667.1| Flagellar hook protein FlgE [Yersinia ruckeri ATCC 29473]
 gi|238706460|gb|EEP98834.1| Flagellar hook protein FlgE [Yersinia ruckeri ATCC 29473]
          Length = 427

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 13/71 (18%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQS 71
          SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS  G+ VK  G+ Q 
Sbjct: 8  SGLNAASSNLDVIGNNIANSATSG-------FKSGSVSFADMFAGSQTGMGVKVAGITQ- 59

Query: 72 TFVEEFDPGHP 82
              +F+ G P
Sbjct: 60 ----DFNDGTP 66


>gi|118588711|ref|ZP_01546119.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
 gi|118438697|gb|EAV45330.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
          Length = 260

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          HIA +G+  Q   +++IS N+AN RTTG       ++++   F+++++
Sbjct: 5  HIAATGMKAQELNVEVISNNVANMRTTG-------FKKQRADFQDLLY 45


>gi|281417194|ref|ZP_06248214.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          JW20]
 gi|281408596|gb|EFB38854.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          JW20]
          Length = 134

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 11/65 (16%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----G 59
          ++A   +    L     R + IS+NIAN     DTPG   Y+RKT++FEE ++ +     
Sbjct: 5  ILAGTDVLEKSLDAALLRNEAISQNIANV----DTPG---YKRKTVAFEEYLNDARAKIK 57

Query: 60 GVRVK 64
          G+R +
Sbjct: 58 GIRTR 62


>gi|256004780|ref|ZP_05429755.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          DSM 2360]
 gi|255991230|gb|EEU01337.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          DSM 2360]
 gi|316940781|gb|ADU74815.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          DSM 1313]
          Length = 134

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 11/65 (16%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----G 59
          ++A   +    L     R + IS+NIAN     DTPG   Y+RKT++FEE ++ +     
Sbjct: 5  ILAGTDVLEKSLDAALLRNEAISQNIANV----DTPG---YKRKTVAFEEYLNDARAKIK 57

Query: 60 GVRVK 64
          G+R +
Sbjct: 58 GIRTR 62


>gi|238793998|ref|ZP_04637616.1| Flagellar hook protein FlgE [Yersinia intermedia ATCC 29909]
 gi|238726630|gb|EEQ18166.1| Flagellar hook protein FlgE [Yersinia intermedia ATCC 29909]
          Length = 425

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 13/71 (18%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQS 71
          SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS  G+ VK  G+ Q 
Sbjct: 8  SGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGITQ- 59

Query: 72 TFVEEFDPGHP 82
              +F+ G P
Sbjct: 60 ----DFNDGTP 66


>gi|187778756|ref|ZP_02995229.1| hypothetical protein CLOSPO_02351 [Clostridium sporogenes ATCC
          15579]
 gi|187772381|gb|EDU36183.1| hypothetical protein CLOSPO_02351 [Clostridium sporogenes ATCC
          15579]
          Length = 350

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          Y++ S +   SGL  Q  R+ I+  NIANA TT        ++ ++I F++++ 
Sbjct: 16 YMLRSMYSGISGLKAQQTRLDIVGNNIANANTT-------AFKSQSIRFQDMLS 62


>gi|238788315|ref|ZP_04632109.1| Flagellar hook protein FlgE [Yersinia frederiksenii ATCC 33641]
 gi|238723561|gb|EEQ15207.1| Flagellar hook protein FlgE [Yersinia frederiksenii ATCC 33641]
          Length = 428

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 13/71 (18%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQS 71
          SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS  G+ VK  G+ Q 
Sbjct: 8  SGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGITQ- 59

Query: 72 TFVEEFDPGHP 82
              +F+ G P
Sbjct: 60 ----DFNDGTP 66


>gi|197285510|ref|YP_002151382.1| flagellar hook protein FlgE [Proteus mirabilis HI4320]
 gi|227356001|ref|ZP_03840393.1| flagellar hook protein [Proteus mirabilis ATCC 29906]
 gi|194682997|emb|CAR43446.1| flagellar hook protein [Proteus mirabilis HI4320]
 gi|227163989|gb|EEI48891.1| flagellar hook protein [Proteus mirabilis ATCC 29906]
          Length = 406

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 8/60 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVRVKKIGVDQS 71
          SGL   +A +  I  NI+N+ T G       ++  T+SF +V  GSG G+ VK  G+ Q+
Sbjct: 8  SGLNAAAANLDTIGNNISNSATYG-------FKGATVSFADVFAGSGAGLGVKVSGISQN 60


>gi|317152826|ref|YP_004120874.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
          Aspo-2]
 gi|316943077|gb|ADU62128.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
          Aspo-2]
          Length = 515

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 9/66 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGV 61
          +  S +   SGL  QS    ++S N+AN+ TT        Y+  +I+FE+V + +   G 
Sbjct: 3  ITGSMYTGISGLKAQSQATSVVSNNLANSTTT-------AYKSSSITFEDVFYSTVYAGG 55

Query: 62 RVKKIG 67
           V ++G
Sbjct: 56 SVGQVG 61


>gi|238916755|ref|YP_002930272.1| flagellar hook protein FlgE [Eubacterium eligens ATCC 27750]
 gi|238872115|gb|ACR71825.1| flagellar hook protein FlgE [Eubacterium eligens ATCC 27750]
          Length = 464

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 20/81 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
          ++ S + A SGL     RM +I  NIAN  T         ++ ++++F EV +       
Sbjct: 24 MMRSMYSAVSGLKAHQTRMDVIGNNIANVNTV-------AFKSQSMTFSEVFYQTTQTAS 76

Query: 57 ------GSGGVRVKKIGVDQS 71
                G GG   K+IG+  S
Sbjct: 77 GPNAESGKGGTNAKQIGLGSS 97


>gi|332994165|gb|AEF04220.1| flagellar basal-body rod protein FlgB [Alteromonas sp. SN2]
          Length = 143

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 22/81 (27%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----------HGSGG-- 60
          S LA+++ RM++IS N+ANA    +TPG   Y+ K I F + M          H  GG  
Sbjct: 14 SALAIRTDRMEVISGNLANA----NTPG---YKAKDIDFNKAMESAMSAQDGQHKLGGGS 66

Query: 61 -VRV--KKIGVDQSTFVEEFD 78
           VR   K IG D S+    F+
Sbjct: 67 LVRTHDKHIGGDVSSVASNFE 87


>gi|238782794|ref|ZP_04626823.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
          43970]
 gi|238716217|gb|EEQ08200.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
          43970]
          Length = 260

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|119503646|ref|ZP_01625729.1| hypothetical protein MGP2080_03865 [marine gamma proteobacterium
          HTCC2080]
 gi|119460708|gb|EAW41800.1| hypothetical protein MGP2080_03865 [marine gamma proteobacterium
          HTCC2080]
          Length = 261

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 11/65 (16%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA +GL  Q  +M  IS N+ANA T G       ++R  + FE++++      V+++
Sbjct: 4  SLWIAKTGLDAQQTKMATISNNLANAGTNG-------FKRGRVIFEDLLY----QNVRQV 52

Query: 67 GVDQS 71
          G   S
Sbjct: 53 GAQSS 57


>gi|238796906|ref|ZP_04640410.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
          43969]
 gi|238719166|gb|EEQ10978.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
          43969]
          Length = 260

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|238758110|ref|ZP_04619290.1| Flagellar hook protein FlgE [Yersinia aldovae ATCC 35236]
 gi|238703648|gb|EEP96185.1| Flagellar hook protein FlgE [Yersinia aldovae ATCC 35236]
          Length = 428

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 13/71 (18%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQS 71
          SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS  G+ VK  G+ Q 
Sbjct: 8  SGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGITQ- 59

Query: 72 TFVEEFDPGHP 82
              +F+ G P
Sbjct: 60 ----DFNDGTP 66


>gi|260866415|ref|YP_003232817.1| putative lateral flagellar component of cell-distal portion of
          basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|257762771|dbj|BAI34266.1| predicted lateral flagellar component of cell-distal portion of
          basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|323178492|gb|EFZ64070.1| flagellar basal-body rod protein FlgG [Escherichia coli 1180]
          Length = 261

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ +
Sbjct: 3  AALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFY 46


>gi|283834453|ref|ZP_06354194.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
          29220]
 gi|291070000|gb|EFE08109.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
          29220]
          Length = 261

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ +
Sbjct: 3  AALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFY 46


>gi|152980126|ref|YP_001353113.1| FlgG flagellar basal body rod protein [Janthinobacterium sp.
          Marseille]
 gi|151280203|gb|ABR88613.1| FlgG flagellar basal body rod protein [Janthinobacterium sp.
          Marseille]
          Length = 260

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q  +M +IS N+AN  T+G       ++R    FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTSG-------FKRSRAVFEDLLY 46


>gi|170680582|ref|YP_001742375.1| flagellar basal body rod protein FlgG [Escherichia coli SMS-3-5]
 gi|256020230|ref|ZP_05434095.1| flagellar basal body rod protein FlgG [Shigella sp. D9]
 gi|260853468|ref|YP_003227359.1| putative lateral flagellar component of cell-distal portion of
          basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|293403357|ref|ZP_06647448.1| flgG [Escherichia coli FVEC1412]
 gi|293408369|ref|ZP_06652208.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|298378968|ref|ZP_06988849.1| flagellar basal-body rod protein FlgG [Escherichia coli FVEC1302]
 gi|300900357|ref|ZP_07118533.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300936128|ref|ZP_07151067.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|306813301|ref|ZP_07447494.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|307313517|ref|ZP_07593138.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|331645420|ref|ZP_08346524.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|332281392|ref|ZP_08393805.1| lateral flagellar rod protein [Shigella sp. D9]
 gi|59889782|emb|CAH19138.1| Lateral flagellar rod protein (FlgG-like) [Escherichia coli]
 gi|170518300|gb|ACB16478.1| lateral flagellar rod protein LfgG [Escherichia coli SMS-3-5]
 gi|257752117|dbj|BAI23619.1| predicted lateral flagellar component of cell-distal portion of
          basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|284920046|emb|CBG33103.1| lateral flagellar rod protein (FlgG-like) [Escherichia coli 042]
 gi|291429210|gb|EFF02230.1| flgG [Escherichia coli FVEC1412]
 gi|291471547|gb|EFF14030.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|298280081|gb|EFI21585.1| flagellar basal-body rod protein FlgG [Escherichia coli FVEC1302]
 gi|300356125|gb|EFJ71995.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300458706|gb|EFK22199.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|305854064|gb|EFM54503.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|306906685|gb|EFN37196.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|315059544|gb|ADT73871.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli W]
 gi|323158101|gb|EFZ44200.1| flagellar basal-body rod protein FlgG [Escherichia coli EPECa14]
 gi|323171066|gb|EFZ56715.1| flagellar basal-body rod protein FlgG [Escherichia coli LT-68]
 gi|323191540|gb|EFZ76801.1| flagellar basal-body rod protein FlgG [Escherichia coli RN587/1]
 gi|323379897|gb|ADX52165.1| flagellar basal-body rod protein FlgG [Escherichia coli KO11]
 gi|323975928|gb|EGB71022.1| flagellar basal-body rod protein FlgG [Escherichia coli TW10509]
 gi|327254556|gb|EGE66172.1| flagellar basal-body rod protein FlgG [Escherichia coli STEC_7v]
 gi|331045582|gb|EGI17708.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|332103744|gb|EGJ07090.1| lateral flagellar rod protein [Shigella sp. D9]
          Length = 261

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ +
Sbjct: 3  AALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFY 46


>gi|331666548|ref|ZP_08367422.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
 gi|331065772|gb|EGI37656.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
          Length = 261

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ +
Sbjct: 3  AALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFY 46


>gi|218703527|ref|YP_002411046.1| flagellar basal body rod protein FlgG [Escherichia coli UMN026]
 gi|218430624|emb|CAR11490.1| Flagellar basal-body rod protein (flgG-like) (Distal rod protein)
          [Escherichia coli UMN026]
          Length = 303

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ +
Sbjct: 45 AALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFY 88


>gi|27381969|ref|NP_773498.1| flagellar hook protein FlgE [Bradyrhizobium japonicum USDA 110]
 gi|27355139|dbj|BAC52123.1| flagellar hook protein [Bradyrhizobium japonicum USDA 110]
          Length = 410

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 7/69 (10%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          SG++ QS ++  +S+NIAN  TTG       Y+R +  F  ++  SG        V+ + 
Sbjct: 12 SGMSAQSNKLSTVSDNIANVNTTG-------YKRASTEFSSLILKSGSGNYDSGAVETTV 64

Query: 73 FVEEFDPGH 81
               D GH
Sbjct: 65 RYAISDAGH 73


>gi|240145497|ref|ZP_04744098.1| flagellar basal body and hook protein [Roseburia intestinalis
          L1-82]
 gi|257202312|gb|EEV00597.1| flagellar basal body and hook protein [Roseburia intestinalis
          L1-82]
          Length = 551

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 20/82 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
          ++ S + A SGL     +M +I  NIAN  T         ++  ++ F++V++       
Sbjct: 1  MMRSMYSAVSGLKTHQTKMDVIGNNIANVNTV-------AFKSSSVVFQDVLYQMTSNAS 53

Query: 57 ------GSGGVRVKKIGVDQST 72
                G+GGV  K+IG+  +T
Sbjct: 54 GANAATGTGGVNAKQIGLGVTT 75


>gi|300854205|ref|YP_003779189.1| flagellar basal body protein FlgB [Clostridium ljungdahlii DSM
          13528]
 gi|300434320|gb|ADK14087.1| flagellar basal body protein FlgB [Clostridium ljungdahlii DSM
          13528]
          Length = 133

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 13/58 (22%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++YL+A       GL    AR Q IS NI+N  T G       Y+RK ++FEE +  S
Sbjct: 12 VNYLLAR------GLDAAEARSQAISSNISNINTAG-------YKRKYVTFEENLKNS 56


>gi|157362948|ref|YP_001469715.1| flagellar basal-body rod protein FlgB [Thermotoga lettingae TMO]
 gi|157313552|gb|ABV32651.1| flagellar basal-body rod protein FlgB [Thermotoga lettingae TMO]
          Length = 125

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 7/56 (12%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I  + + V   R  I ++NIANA    +TPG   Y+RK + FEE+++ +  +++K
Sbjct: 7  QIIKTAMDVAILRQNIFAQNIANA----ETPG---YKRKYVVFEELLNQAMSMKMK 55


>gi|283784086|ref|YP_003363951.1| lateral flagellar rod protein [Citrobacter rodentium ICC168]
 gi|282947540|emb|CBG87093.1| lateral flagellar rod protein [Citrobacter rodentium ICC168]
          Length = 261

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ +
Sbjct: 3  AALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFY 46


>gi|193222346|emb|CAL62046.2| Flagellar basal-body rod protein FlgG (Distal rod protein)
          [Herminiimonas arsenicoxydans]
          Length = 260

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +GL  Q  +M +IS N+AN  TTG       ++R    FE++++
Sbjct: 1  MIRSLWISKTGLDAQQTQMDVISNNLANVSTTG-------FKRSRAVFEDLLY 46


>gi|15616948|ref|NP_240161.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
          APS (Acyrthosiphon pisum)]
 gi|219681701|ref|YP_002468087.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
          5A (Acyrthosiphon pisum)]
 gi|219682256|ref|YP_002468640.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
          Tuc7 (Acyrthosiphon pisum)]
 gi|257471397|ref|ZP_05635396.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
          LSR1 (Acyrthosiphon pisum)]
 gi|11386809|sp|P57424|FLGG_BUCAI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
          Full=Distal rod protein
 gi|25298916|pir||G84969 flagellar basal-body rod protein flgG [imported] - Buchnera sp.
          (strain APS)
 gi|10039013|dbj|BAB13047.1| flagellar basal-body rod protein flgG [Buchnera aphidicola str.
          APS (Acyrthosiphon pisum)]
 gi|219621989|gb|ACL30145.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
          Tuc7 (Acyrthosiphon pisum)]
 gi|219624544|gb|ACL30699.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
          5A (Acyrthosiphon pisum)]
 gi|311086079|gb|ADP66161.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
          LL01 (Acyrthosiphon pisum)]
 gi|311086651|gb|ADP66732.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
          TLW03 (Acyrthosiphon pisum)]
 gi|311087237|gb|ADP67317.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
          JF99 (Acyrthosiphon pisum)]
 gi|311087756|gb|ADP67835.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
          JF98 (Acyrthosiphon pisum)]
          Length = 260

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +GL  Q   M IIS N+AN  T G       ++R    FE++M+
Sbjct: 1  MIPSLWISKTGLDAQQINMNIISNNLANVSTNG-------FKRSRAVFEDLMY 46


>gi|301645415|ref|ZP_07245356.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
 gi|301076299|gb|EFK91105.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
          Length = 261

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ +
Sbjct: 3  AALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFY 46


>gi|152990377|ref|YP_001356099.1| flagellar basal body and hook protein FlgE [Nitratiruptor sp.
           SB155-2]
 gi|151422238|dbj|BAF69742.1| flagellar basal body and hook protein FlgE [Nitratiruptor sp.
           SB155-2]
          Length = 533

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 69  DQSTFVEEFDPGHPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           +Q TF     PG  ++   SG+++  NV++  E  ++    R Y AN +TI  S  ++ T
Sbjct: 468 NQQTFTPIIVPGGVISKIRSGMLEMSNVDISQEFINLITAQRAYQANAKTITTSDQILQT 527

Query: 128 TLDLLR 133
           T+D+ R
Sbjct: 528 TMDIKR 533


>gi|149194279|ref|ZP_01871376.1| flagellar basal-body rod protein [Caminibacter mediatlanticus TB-2]
 gi|149135454|gb|EDM23933.1| flagellar basal-body rod protein [Caminibacter mediatlanticus TB-2]
          Length = 262

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 16/75 (21%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +KK+G +   FV    PG  + +       G ++  NVNV+ E  D+ ETNRL       
Sbjct: 186 IKKVGNNMWDFV----PGSEIISTKNTTIQGFIEKSNVNVIKEMTDLIETNRL------- 234

Query: 118 IKQSHDMMTTTLDLL 132
           ++Q   +MTT +D L
Sbjct: 235 VEQYQKVMTTFMDDL 249


>gi|74317650|ref|YP_315390.1| flagellar basal body rod protein FlgG [Thiobacillus denitrificans
          ATCC 25259]
 gi|74057145|gb|AAZ97585.1| flagellar basal body rod protein FlgG [Thiobacillus denitrificans
          ATCC 25259]
          Length = 260

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q  +M +IS N+AN  T+G       ++R    FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTSG-------FKRARAVFEDLLY 46


>gi|170021358|ref|YP_001726312.1| flagellar basal body rod protein FlgG [Escherichia coli ATCC
          8739]
 gi|188494741|ref|ZP_03002011.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|307136860|ref|ZP_07496216.1| flagellar basal body rod protein FlgG [Escherichia coli H736]
 gi|331640715|ref|ZP_08341862.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331671806|ref|ZP_08372602.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
 gi|169756286|gb|ACA78985.1| flagellar basal-body rod protein FlgG [Escherichia coli ATCC
          8739]
 gi|188489940|gb|EDU65043.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|315616825|gb|EFU97442.1| flagellar basal-body rod protein FlgG [Escherichia coli 3431]
 gi|323181549|gb|EFZ66969.1| flagellar basal-body rod protein FlgG [Escherichia coli 1357]
 gi|331040089|gb|EGI12297.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331070795|gb|EGI42154.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
          Length = 261

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ +
Sbjct: 3  AALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFY 46


>gi|160896077|ref|YP_001561659.1| flagellar basal-body rod protein FlgG [Delftia acidovorans SPH-1]
 gi|160361661|gb|ABX33274.1| flagellar basal-body rod protein FlgG [Delftia acidovorans SPH-1]
          Length = 260

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +G+  Q  ++ +IS N+AN  TTG       Y+R +  FE++++
Sbjct: 1  MINSLFISKTGMEAQQTQLDVISHNLANVSTTG-------YKRASAVFEDLIY 46


>gi|332531618|ref|ZP_08407515.1| flagellar hook protein FlgE [Hylemonella gracilis ATCC 19624]
 gi|332038981|gb|EGI75410.1| flagellar hook protein FlgE [Hylemonella gracilis ATCC 19624]
          Length = 512

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRVKKIGVD 69
          SGL   S  + +I  NIANA TTG       ++     F +V     G+ G     IGV+
Sbjct: 8  SGLNASSRSLDVIGNNIANANTTG-------FKSGRAEFGDVFASSIGASGAGTIGIGVE 60

Query: 70 QSTFVEEFDPGH 81
           ST  ++F  G+
Sbjct: 61 VSTVSQQFTQGN 72


>gi|37525841|ref|NP_929185.1| flagellar hook protein FlgE [Photorhabdus luminescens subsp.
          laumondii TTO1]
 gi|36785270|emb|CAE14211.1| Flagellar hook protein FlgE [Photorhabdus luminescens subsp.
          laumondii TTO1]
          Length = 404

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 13/71 (18%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVRVKKIGVDQS 71
          SGL   +  + +I  NIANA T G       ++  T++F ++  GS  G+ VK  GV+Q+
Sbjct: 8  SGLNAAAGNLDVIGNNIANAATYG-------FKSSTVAFSDIFAGSQVGLGVKVSGVNQN 60

Query: 72 TFVEEFDPGHP 82
               F  G P
Sbjct: 61 -----FKDGTP 66


>gi|315125984|ref|YP_004067987.1| flagellar hook protein FlgE [Pseudoalteromonas sp. SM9913]
 gi|315014498|gb|ADT67836.1| flagellar hook protein FlgE [Pseudoalteromonas sp. SM9913]
          Length = 442

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGVRVKKI 66
          +I  SGL    A +++ S NIAN+ T G       Y+  T  F  V +GS  GGV+V  +
Sbjct: 5  NIGLSGLKSTQAGLEVTSNNIANSGTAG-------YKNNTAEFAAVYNGSQRGGVKVANV 57

Query: 67 GVD 69
            D
Sbjct: 58 KED 60


>gi|291536012|emb|CBL09124.1| fagellar hook-basal body proteins [Roseburia intestinalis M50/1]
          Length = 551

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 20/82 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
          ++ S + A SGL     +M +I  NIAN  T         ++  ++ F++V++       
Sbjct: 1  MMRSMYSAVSGLKTHQTKMDVIGNNIANVNTV-------AFKSSSVVFQDVLYQMTSNAS 53

Query: 57 ------GSGGVRVKKIGVDQST 72
                G+GGV  K+IG+  +T
Sbjct: 54 GANAATGTGGVNAKQIGLGVTT 75


>gi|254780525|ref|YP_003064938.1| flagellar hook protein FlgE [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040202|gb|ACT56998.1| flagellar hook protein FlgE [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 421

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 19/124 (15%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           ++ S   A SG+  QS R+  +S+NIAN  T G       Y+R  I+F  ++       +
Sbjct: 3   ILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVG-------YKRTAIAFSSLVFPSTSNSY 55

Query: 57  GSGGVRV--KKIGVDQSTFVEEFDPGHPVANASG--IVK-YPNVNVLVETADMRETNRLY 111
            SGG+ +  K +  +Q + +             G  IVK   NVN L    D    N  +
Sbjct: 56  VSGGLEISTKDMISEQGSLMHTASNTDLAIQGKGFFIVKGRDNVNCLTRAGDFHINNEGF 115

Query: 112 MANL 115
           + N+
Sbjct: 116 LENV 119


>gi|294675565|ref|YP_003576180.1| flagellar hook-associated protein FlgK [Rhodobacter capsulatus SB
          1003]
 gi|294474385|gb|ADE83773.1| flagellar hook-associated protein FlgK [Rhodobacter capsulatus SB
          1003]
          Length = 484

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 8/67 (11%)

Query: 5  IASA-HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          IASA + A SGL   S + +++S NIANA T G       Y R+ +S      G  G  V
Sbjct: 3  IASAFNFAISGLTASSRKAEVVSSNIANAMTEG-------YARRELSIASQTLGGTGGGV 55

Query: 64 KKIGVDQ 70
          + +GV++
Sbjct: 56 RILGVNR 62


>gi|114707045|ref|ZP_01439944.1| flagellar hook protein E [Fulvimarina pelagi HTCC2506]
 gi|114537595|gb|EAU40720.1| flagellar hook protein E [Fulvimarina pelagi HTCC2506]
          Length = 390

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          SG+  QS ++  +S+NIAN+ TTG       Y+R  + F  ++  SGG
Sbjct: 12 SGMNAQSNKLSAVSDNIANSATTG-------YKRADVEFSSLVINSGG 52


>gi|322832566|ref|YP_004212593.1| flagellar basal-body rod protein FlgG [Rahnella sp. Y9602]
 gi|321167767|gb|ADW73466.1| flagellar basal-body rod protein FlgG [Rahnella sp. Y9602]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S +IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIPSLYIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|125972983|ref|YP_001036893.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          ATCC 27405]
 gi|125713208|gb|ABN51700.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          ATCC 27405]
          Length = 134

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 11/65 (16%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----G 59
          ++A   +    L     R + IS+NIAN  TTG       Y+RKT++FEE ++ +     
Sbjct: 5  ILAGTDVLEKSLDAALLRNEAISQNIANVDTTG-------YKRKTVAFEEYLNDARAKIK 57

Query: 60 GVRVK 64
          G+R +
Sbjct: 58 GIRTR 62


>gi|311280015|ref|YP_003942246.1| flagellar basal-body rod protein FlgG [Enterobacter cloacae SCF1]
 gi|308749210|gb|ADO48962.1| flagellar basal-body rod protein FlgG [Enterobacter cloacae SCF1]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|238919261|ref|YP_002932776.1| flagellar basal body rod protein FlgG [Edwardsiella ictaluri
          93-146]
 gi|238868830|gb|ACR68541.1| flagellar basal-body rod protein FlgG, putative [Edwardsiella
          ictaluri 93-146]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S +IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|261341492|ref|ZP_05969350.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
          ATCC 35316]
 gi|288316288|gb|EFC55226.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
          ATCC 35316]
          Length = 261

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           I+ +GLA Q A+M  IS N+AN  TTG       ++R  + F ++ +
Sbjct: 6  WISKTGLAAQDAKMSAISNNLANVNTTG-------FKRDRVMFADLFY 46


>gi|294635612|ref|ZP_06714089.1| flagellar basal-body rod protein FlgG [Edwardsiella tarda ATCC
          23685]
 gi|291091064|gb|EFE23625.1| flagellar basal-body rod protein FlgG [Edwardsiella tarda ATCC
          23685]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S +IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|42522134|ref|NP_967514.1| flagellar basal-body rod protein FlgG [Bdellovibrio bacteriovorus
          HD100]
 gi|39574665|emb|CAE78507.1| flagellar basal-body rod protein FlgG [Bdellovibrio bacteriovorus
          HD100]
          Length = 261

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++ S + A +G+A Q   M +I+ NIAN  T G       ++R    FE++M+
Sbjct: 1  MLKSLNTAATGMAAQQTNMDVIANNIANVSTAG-------FKRSRAEFEDLMY 46


>gi|226327743|ref|ZP_03803261.1| hypothetical protein PROPEN_01616 [Proteus penneri ATCC 35198]
 gi|225203447|gb|EEG85801.1| hypothetical protein PROPEN_01616 [Proteus penneri ATCC 35198]
          Length = 153

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|188534168|ref|YP_001907965.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
 gi|188029210|emb|CAO97082.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++M+
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLMY 46


>gi|238762358|ref|ZP_04623329.1| Lateral flagellar rod protein (FlgG-like) [Yersinia kristensenii
          ATCC 33638]
 gi|238699343|gb|EEP92089.1| Lateral flagellar rod protein (FlgG-like) [Yersinia kristensenii
          ATCC 33638]
          Length = 261

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           I+ +GLA Q A+M  IS N+AN  T       D ++R  + FE++ +
Sbjct: 6  WISKTGLAAQDAKMNAISNNLANVNT-------DGFKRDRVVFEDLFY 46


>gi|292487941|ref|YP_003530816.1| flagellar basal-body rod protein FlgG [Erwinia amylovora
          CFBP1430]
 gi|292899160|ref|YP_003538529.1| flagellar basal-body rod protein FlgG [Erwinia amylovora ATCC
          49946]
 gi|291199008|emb|CBJ46119.1| flagellar basal-body rod protein FlgG (distal rod protein)
          [Erwinia amylovora ATCC 49946]
 gi|291553363|emb|CBA20408.1| Flagellar basal-body rod protein flgG [Erwinia amylovora
          CFBP1430]
 gi|312172062|emb|CBX80319.1| Flagellar basal-body rod protein flgG [Erwinia amylovora ATCC
          BAA-2158]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++M+
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLMY 46


>gi|85710166|ref|ZP_01041231.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
 gi|85688876|gb|EAQ28880.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
          Length = 263

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTG 36
          H+A +GL  Q ARM++I+ N+AN  TTG
Sbjct: 7  HVARTGLEAQDARMRVIANNLANIGTTG 34


>gi|157146224|ref|YP_001453543.1| flagellar basal body rod protein FlgG [Citrobacter koseri ATCC
          BAA-895]
 gi|157083429|gb|ABV13107.1| hypothetical protein CKO_01981 [Citrobacter koseri ATCC BAA-895]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|269138584|ref|YP_003295284.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|267984244|gb|ACY84073.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|304558594|gb|ADM41258.1| Flagellar basal-body rod protein FlgG [Edwardsiella tarda FL6-60]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S +IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|156934438|ref|YP_001438354.1| flagellar basal body rod protein FlgG [Cronobacter sakazakii ATCC
          BAA-894]
 gi|156532692|gb|ABU77518.1| hypothetical protein ESA_02269 [Cronobacter sakazakii ATCC
          BAA-894]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|332342624|gb|AEE55958.1| flagellar basal-body rod protein FlgG [Escherichia coli UMNK88]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|296102906|ref|YP_003613052.1| flagellar basal body rod protein FlgG [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
 gi|295057365|gb|ADF62103.1| flagellar basal body rod protein FlgG [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|237731009|ref|ZP_04561490.1| flagellar basal body rod protein FlgG [Citrobacter sp. 30_2]
 gi|226906548|gb|EEH92466.1| flagellar basal body rod protein FlgG [Citrobacter sp. 30_2]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|260597447|ref|YP_003210018.1| flagellar basal body rod protein FlgG [Cronobacter turicensis
          z3032]
 gi|260216624|emb|CBA29921.1| Flagellar basal-body rod protein flgG [Cronobacter turicensis
          z3032]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|161503733|ref|YP_001570845.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865080|gb|ABX21703.1| hypothetical protein SARI_01818 [Salmonella enterica subsp.
          arizonae serovar 62:z4,z23:--]
          Length = 260

 Score = 35.8 bits (81), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|320107042|ref|YP_004182632.1| flagellar basal-body rod protein FlgG [Terriglobus saanensis
          SP1PR4]
 gi|319925563|gb|ADV82638.1| flagellar basal-body rod protein FlgG [Terriglobus saanensis
          SP1PR4]
          Length = 262

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I + + A SG++ Q A +  I+ N+AN+ T+G       +RR+ + FE++++
Sbjct: 1  MIRALYTAASGMSAQQANLDTIANNLANSATSG-------FRRRRLQFEDMVY 46


>gi|289804814|ref|ZP_06535443.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 65

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|205353083|ref|YP_002226884.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Gallinarum str. 287/91]
 gi|205272864|emb|CAR37793.1| flagellar basal-body rod protein FlgG (distal rod protein)
          [Salmonella enterica subsp. enterica serovar Gallinarum
          str. 287/91]
 gi|326628163|gb|EGE34506.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Gallinarum str. 9]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|320179222|gb|EFW54180.1| Flagellar basal-body rod protein FlgG [Shigella boydii ATCC 9905]
          Length = 54

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|320173530|gb|EFW48726.1| Flagellar basal-body rod protein FlgG [Shigella dysenteriae CDC
          74-1112]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|261339378|ref|ZP_05967236.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
          ATCC 35316]
 gi|288318179|gb|EFC57117.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
          ATCC 35316]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|213421404|ref|ZP_03354470.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. E01-6750]
          Length = 197

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|213161842|ref|ZP_03347552.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. E00-7866]
          Length = 232

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|195940720|ref|ZP_03086102.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
          str. EC4024]
 gi|295096223|emb|CBK85313.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria
          [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|170768358|ref|ZP_02902811.1| flagellar basal-body rod protein FlgG [Escherichia albertii
          TW07627]
 gi|170123124|gb|EDS92055.1| flagellar basal-body rod protein FlgG [Escherichia albertii
          TW07627]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|332088746|gb|EGI93858.1| flagellar basal-body rod protein FlgG [Shigella boydii 5216-82]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|300722680|ref|YP_003711970.1| flagellar basal-body rod cell-distal protein [Xenorhabdus
          nematophila ATCC 19061]
 gi|297629187|emb|CBJ89783.1| flagellar biosynthesis; cell-distal portion of basal-body rod
          [Xenorhabdus nematophila ATCC 19061]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL VQ   M +I+ N+AN  T+G       ++R+ +  EE+++
Sbjct: 1  MIRSLWIAKTGLDVQQTNMDVIANNLANVSTSG-------FKRQRVVSEELIY 46


>gi|218549194|ref|YP_002382985.1| flagellar basal body rod protein FlgG [Escherichia fergusonii
          ATCC 35469]
 gi|218356735|emb|CAQ89363.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia fergusonii ATCC 35469]
 gi|324113873|gb|EGC07847.1| flagellar basal-body rod protein FlgG [Escherichia fergusonii
          B253]
 gi|325497614|gb|EGC95473.1| flagellar basal body rod protein FlgG [Escherichia fergusonii
          ECD227]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|146311248|ref|YP_001176322.1| flagellar basal body rod protein FlgG [Enterobacter sp. 638]
 gi|145318124|gb|ABP60271.1| flagellar basal-body rod protein FlgG [Enterobacter sp. 638]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|124268254|ref|YP_001022258.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
 gi|124261029|gb|ABM96023.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
          Length = 420

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 10/69 (14%)

Query: 73  FVEEFDPGHPVANA----------SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           +   F  G PV  A          SG ++  N+++  E  +M    R+Y AN QT+K   
Sbjct: 351 WATTFTSGDPVVGAAGDGNFGVLQSGALEESNIDLTGELVNMITAQRVYQANAQTVKTQD 410

Query: 123 DMMTTTLDL 131
            MM T ++L
Sbjct: 411 SMMQTLVNL 419


>gi|307627452|gb|ADN71756.1| flagellar basal body rod protein FlgG [Escherichia coli UM146]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|218689031|ref|YP_002397243.1| flagellar basal body rod protein FlgG [Escherichia coli ED1a]
 gi|218426595|emb|CAR07423.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli ED1a]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|15801195|ref|NP_287212.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
          EDL933]
 gi|15830710|ref|NP_309483.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
          str. Sakai]
 gi|16129041|ref|NP_415596.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli str. K-12 substr. MG1655]
 gi|26247218|ref|NP_753258.1| flagellar basal body rod protein FlgG [Escherichia coli CFT073]
 gi|89107924|ref|AP_001704.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli str. K-12 substr. W3110]
 gi|91210230|ref|YP_540216.1| flagellar basal body rod protein FlgG [Escherichia coli UTI89]
 gi|110641254|ref|YP_668984.1| flagellar basal body rod protein FlgG [Escherichia coli 536]
 gi|110805095|ref|YP_688615.1| flagellar basal body rod protein FlgG [Shigella flexneri 5 str.
          8401]
 gi|117623264|ref|YP_852177.1| flagellar basal body rod protein FlgG [Escherichia coli APEC O1]
 gi|157156521|ref|YP_001462312.1| flagellar basal body rod protein FlgG [Escherichia coli E24377A]
 gi|168747146|ref|ZP_02772168.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4113]
 gi|168758629|ref|ZP_02783636.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4401]
 gi|168764490|ref|ZP_02789497.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4501]
 gi|168767737|ref|ZP_02792744.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4486]
 gi|168773923|ref|ZP_02798930.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4196]
 gi|168783608|ref|ZP_02808615.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4076]
 gi|168790013|ref|ZP_02815020.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC869]
 gi|168802023|ref|ZP_02827030.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC508]
 gi|170080729|ref|YP_001730049.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli str. K-12 substr. DH10B]
 gi|170679890|ref|YP_001744102.1| flagellar basal body rod protein FlgG [Escherichia coli SMS-3-5]
 gi|188492805|ref|ZP_03000075.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|191168453|ref|ZP_03030241.1| flagellar basal-body rod protein FlgG [Escherichia coli B7A]
 gi|191172450|ref|ZP_03033991.1| flagellar basal-body rod protein FlgG [Escherichia coli F11]
 gi|193064556|ref|ZP_03045636.1| flagellar basal-body rod protein FlgG [Escherichia coli E22]
 gi|193069501|ref|ZP_03050455.1| flagellar basal-body rod protein FlgG [Escherichia coli E110019]
 gi|194438123|ref|ZP_03070216.1| flagellar basal-body rod protein FlgG [Escherichia coli 101-1]
 gi|195935468|ref|ZP_03080850.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
          str. EC4024]
 gi|208806632|ref|ZP_03248969.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4206]
 gi|208815071|ref|ZP_03256250.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4045]
 gi|208822750|ref|ZP_03263069.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4042]
 gi|209399139|ref|YP_002269924.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4115]
 gi|209918332|ref|YP_002292416.1| flagellar basal body rod protein FlgG [Escherichia coli SE11]
 gi|215486287|ref|YP_002328718.1| flagellar basal body rod protein FlgG [Escherichia coli O127:H6
          str. E2348/69]
 gi|217328263|ref|ZP_03444345.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. TW14588]
 gi|218553656|ref|YP_002386569.1| flagellar basal body rod protein FlgG [Escherichia coli IAI1]
 gi|218557960|ref|YP_002390873.1| flagellar basal body rod protein FlgG [Escherichia coli S88]
 gi|218694612|ref|YP_002402279.1| flagellar basal body rod protein FlgG [Escherichia coli 55989]
 gi|218700419|ref|YP_002408048.1| flagellar basal body rod protein FlgG [Escherichia coli IAI39]
 gi|218704486|ref|YP_002412005.1| flagellar basal body rod protein FlgG [Escherichia coli UMN026]
 gi|227886564|ref|ZP_04004369.1| flagellar basal body rod protein FlgG [Escherichia coli 83972]
 gi|237706936|ref|ZP_04537417.1| flagellar basal-body rod protein flgG [Escherichia sp. 3_2_53FAA]
 gi|238900332|ref|YP_002926128.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli BW2952]
 gi|253773898|ref|YP_003036729.1| flagellar basal body rod protein FlgG [Escherichia coli
          'BL21-Gold(DE3)pLysS AG']
 gi|254161184|ref|YP_003044292.1| flagellar basal body rod protein FlgG [Escherichia coli B str.
          REL606]
 gi|254792460|ref|YP_003077297.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
          str. TW14359]
 gi|256018665|ref|ZP_05432530.1| flagellar basal body rod protein FlgG [Shigella sp. D9]
 gi|256023224|ref|ZP_05437089.1| flagellar basal body rod protein FlgG [Escherichia sp. 4_1_40B]
 gi|260843318|ref|YP_003221096.1| flagellar component FlgG of cell-distal portion of basal-body rod
          [Escherichia coli O103:H2 str. 12009]
 gi|260854561|ref|YP_003228452.1| flagellar component FlgG of cell-distal portion of basal-body rod
          [Escherichia coli O26:H11 str. 11368]
 gi|260867441|ref|YP_003233843.1| flagellar component FlgG of cell-distal portion of basal-body rod
          [Escherichia coli O111:H- str. 11128]
 gi|261227017|ref|ZP_05941298.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256251|ref|ZP_05948784.1| flagellar component FlgG of cell-distal portion of basal-body rod
          [Escherichia coli O157:H7 str. FRIK966]
 gi|291282098|ref|YP_003498916.1| Flagellar basal-body rod protein flgG [Escherichia coli O55:H7
          str. CB9615]
 gi|293404362|ref|ZP_06648356.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1412]
 gi|293409444|ref|ZP_06653020.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|293433368|ref|ZP_06661796.1| flagellar basal-body rod protein FlgG [Escherichia coli B088]
 gi|297516691|ref|ZP_06935077.1| flagellar basal body rod protein FlgG [Escherichia coli OP50]
 gi|298380142|ref|ZP_06989747.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1302]
 gi|300816780|ref|ZP_07097000.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
 gi|300821141|ref|ZP_07101290.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 119-7]
 gi|300899597|ref|ZP_07117836.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300902469|ref|ZP_07120451.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 84-1]
 gi|300918680|ref|ZP_07135261.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 115-1]
 gi|300922604|ref|ZP_07138704.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 182-1]
 gi|300928370|ref|ZP_07143904.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 187-1]
 gi|300938643|ref|ZP_07153372.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|300950173|ref|ZP_07164118.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 116-1]
 gi|300954382|ref|ZP_07166836.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 175-1]
 gi|300974382|ref|ZP_07172594.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 45-1]
 gi|300982619|ref|ZP_07176203.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 200-1]
 gi|301023265|ref|ZP_07187062.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 69-1]
 gi|301029707|ref|ZP_07192761.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 196-1]
 gi|301051138|ref|ZP_07197968.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 185-1]
 gi|301304983|ref|ZP_07211085.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 124-1]
 gi|301328552|ref|ZP_07221613.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 78-1]
 gi|301644990|ref|ZP_07244956.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
 gi|306814073|ref|ZP_07448246.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|307137713|ref|ZP_07497069.1| flagellar basal body rod protein FlgG [Escherichia coli H736]
 gi|307310144|ref|ZP_07589794.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|309798072|ref|ZP_07692447.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 145-7]
 gi|312968848|ref|ZP_07783055.1| flagellar basal-body rod protein FlgG [Escherichia coli 2362-75]
 gi|331641622|ref|ZP_08342757.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331646336|ref|ZP_08347439.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|331657140|ref|ZP_08358102.1| flagellar basal-body rod protein FlgG [Escherichia coli TA206]
 gi|331662484|ref|ZP_08363407.1| flagellar basal-body rod protein FlgG [Escherichia coli TA143]
 gi|331667478|ref|ZP_08368342.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
 gi|331672598|ref|ZP_08373387.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
 gi|331676869|ref|ZP_08377565.1| flagellar basal-body rod protein FlgG [Escherichia coli H591]
 gi|331682580|ref|ZP_08383199.1| flagellar basal-body rod protein FlgG [Escherichia coli H299]
 gi|332279734|ref|ZP_08392147.1| flagellar basal-body rod protein FlgG [Shigella sp. D9]
 gi|78100014|sp|P0ABX7|FLGG_ECO57 RecName: Full=Flagellar basal-body rod protein flgG; AltName:
          Full=Distal rod protein
 gi|78100015|sp|P0ABX6|FLGG_ECOL6 RecName: Full=Flagellar basal-body rod protein flgG; AltName:
          Full=Distal rod protein
 gi|78100016|sp|P0ABX5|FLGG_ECOLI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
          Full=Distal rod protein
 gi|12514619|gb|AAG55824.1|AE005318_1 flagellar biosynthesis, cell-distal portion of basal-body rod
          [Escherichia coli O157:H7 str. EDL933]
 gi|26107619|gb|AAN79818.1|AE016759_92 Flagellar basal-body rod protein flgG [Escherichia coli CFT073]
 gi|1787318|gb|AAC74162.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli str. K-12 substr. MG1655]
 gi|4062656|dbj|BAA35887.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli str. K12 substr. W3110]
 gi|13360920|dbj|BAB34879.1| flagellar basal body rod protein flgG [Escherichia coli O157:H7
          str. Sakai]
 gi|91071804|gb|ABE06685.1| flagellar basal body rod protein FlgG [Escherichia coli UTI89]
 gi|110342846|gb|ABG69083.1| flagellar basal-body rod protein FlgG [Escherichia coli 536]
 gi|110614643|gb|ABF03310.1| flagellar basal-body rod protein FlgG [Shigella flexneri 5 str.
          8401]
 gi|115512388|gb|ABJ00463.1| flagellar basal-body rod protein FlgG [Escherichia coli APEC O1]
 gi|157078551|gb|ABV18259.1| flagellar basal-body rod protein FlgG [Escherichia coli E24377A]
 gi|169888564|gb|ACB02271.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli str. K-12 substr. DH10B]
 gi|170517608|gb|ACB15786.1| flagellar basal-body rod protein FlgG [Escherichia coli SMS-3-5]
 gi|187770380|gb|EDU34224.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4196]
 gi|188018193|gb|EDU56315.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4113]
 gi|188488004|gb|EDU63107.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|188999095|gb|EDU68081.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4076]
 gi|189354587|gb|EDU73006.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4401]
 gi|189363057|gb|EDU81476.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4486]
 gi|189365523|gb|EDU83939.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4501]
 gi|189370495|gb|EDU88911.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC869]
 gi|189375944|gb|EDU94360.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC508]
 gi|190901472|gb|EDV61233.1| flagellar basal-body rod protein FlgG [Escherichia coli B7A]
 gi|190907334|gb|EDV66932.1| flagellar basal-body rod protein FlgG [Escherichia coli F11]
 gi|192927808|gb|EDV82422.1| flagellar basal-body rod protein FlgG [Escherichia coli E22]
 gi|192957249|gb|EDV87698.1| flagellar basal-body rod protein FlgG [Escherichia coli E110019]
 gi|194423059|gb|EDX39053.1| flagellar basal-body rod protein FlgG [Escherichia coli 101-1]
 gi|208726433|gb|EDZ76034.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4206]
 gi|208731719|gb|EDZ80407.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4045]
 gi|208738235|gb|EDZ85918.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4042]
 gi|209160539|gb|ACI37972.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC4115]
 gi|209773358|gb|ACI84991.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773360|gb|ACI84992.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773362|gb|ACI84993.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773364|gb|ACI84994.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773366|gb|ACI84995.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209911591|dbj|BAG76665.1| flagellar basal-body rod protein FlgG [Escherichia coli SE11]
 gi|215264359|emb|CAS08716.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli O127:H6 str. E2348/69]
 gi|217318690|gb|EEC27116.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. TW14588]
 gi|218351344|emb|CAU97050.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli 55989]
 gi|218360424|emb|CAQ97978.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli IAI1]
 gi|218364729|emb|CAR02419.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli S88]
 gi|218370405|emb|CAR18212.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli IAI39]
 gi|218431583|emb|CAR12462.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli UMN026]
 gi|222032831|emb|CAP75570.1| flagellar basal-body rod protein flgG [Escherichia coli LF82]
 gi|226898146|gb|EEH84405.1| flagellar basal-body rod protein flgG [Escherichia sp. 3_2_53FAA]
 gi|227836768|gb|EEJ47234.1| flagellar basal body rod protein FlgG [Escherichia coli 83972]
 gi|238861100|gb|ACR63098.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli BW2952]
 gi|242376882|emb|CAQ31599.1| flagellar basal-body rod protein FlgG, subunit of Flagellar Motor
          Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324942|gb|ACT29544.1| flagellar basal-body rod protein FlgG [Escherichia coli
          'BL21-Gold(DE3)pLysS AG']
 gi|253973085|gb|ACT38756.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli B str. REL606]
 gi|253977299|gb|ACT42969.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli BL21(DE3)]
 gi|254591860|gb|ACT71221.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli O157:H7 str. TW14359]
 gi|257753210|dbj|BAI24712.1| flagellar component FlgG of cell-distal portion of basal-body rod
          [Escherichia coli O26:H11 str. 11368]
 gi|257758465|dbj|BAI29962.1| flagellar component FlgG of cell-distal portion of basal-body rod
          [Escherichia coli O103:H2 str. 12009]
 gi|257763797|dbj|BAI35292.1| flagellar component FlgG of cell-distal portion of basal-body rod
          [Escherichia coli O111:H- str. 11128]
 gi|260449782|gb|ACX40204.1| flagellar basal-body rod protein FlgG [Escherichia coli DH1]
 gi|281178187|dbj|BAI54517.1| flagellar basal-body rod protein FlgG [Escherichia coli SE15]
 gi|284920901|emb|CBG33964.1| flagellar basal-body rod protein FlgG [Escherichia coli 042]
 gi|290761971|gb|ADD55932.1| Flagellar basal-body rod protein flgG [Escherichia coli O55:H7
          str. CB9615]
 gi|291324187|gb|EFE63609.1| flagellar basal-body rod protein FlgG [Escherichia coli B088]
 gi|291428948|gb|EFF01973.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1412]
 gi|291469912|gb|EFF12396.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|294490415|gb|ADE89171.1| flagellar basal-body rod protein FlgG [Escherichia coli IHE3034]
 gi|298279840|gb|EFI21348.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1302]
 gi|299877395|gb|EFI85606.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 196-1]
 gi|300297159|gb|EFJ53544.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 185-1]
 gi|300307084|gb|EFJ61604.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 200-1]
 gi|300318618|gb|EFJ68402.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 175-1]
 gi|300356868|gb|EFJ72738.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300397110|gb|EFJ80648.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 69-1]
 gi|300405501|gb|EFJ89039.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 84-1]
 gi|300410625|gb|EFJ94163.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 45-1]
 gi|300414174|gb|EFJ97484.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 115-1]
 gi|300421081|gb|EFK04392.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 182-1]
 gi|300450520|gb|EFK14140.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 116-1]
 gi|300456428|gb|EFK19921.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|300463628|gb|EFK27121.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 187-1]
 gi|300526440|gb|EFK47509.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 119-7]
 gi|300530554|gb|EFK51616.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
 gi|300839701|gb|EFK67461.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 124-1]
 gi|300844944|gb|EFK72704.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 78-1]
 gi|301076719|gb|EFK91525.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
 gi|305852710|gb|EFM53158.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|306909862|gb|EFN40356.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|307553080|gb|ADN45855.1| flagellar basal-body rod protein FlgG [Escherichia coli ABU
          83972]
 gi|308118355|gb|EFO55617.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 145-7]
 gi|309701350|emb|CBJ00651.1| flagellar basal-body rod protein FlgG [Escherichia coli ETEC
          H10407]
 gi|312286250|gb|EFR14163.1| flagellar basal-body rod protein FlgG [Escherichia coli 2362-75]
 gi|312945640|gb|ADR26467.1| flagellar basal body rod protein FlgG [Escherichia coli O83:H1
          str. NRG 857C]
 gi|315060356|gb|ADT74683.1| flagellar component of cell-distal portion of basal-body rod
          [Escherichia coli W]
 gi|315135710|dbj|BAJ42869.1| flagellar basal-body rod protein flgG [Escherichia coli DH1]
 gi|315253879|gb|EFU33847.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 85-1]
 gi|315287367|gb|EFU46778.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 110-3]
 gi|315291072|gb|EFU50435.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 153-1]
 gi|315296709|gb|EFU56004.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 16-3]
 gi|315618248|gb|EFU98838.1| flagellar basal-body rod protein FlgG [Escherichia coli 3431]
 gi|320189761|gb|EFW64417.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. EC1212]
 gi|320196440|gb|EFW71063.1| Flagellar basal-body rod protein FlgG [Escherichia coli
          WV_060327]
 gi|320200974|gb|EFW75558.1| Flagellar basal-body rod protein FlgG [Escherichia coli EC4100B]
 gi|320637529|gb|EFX07329.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
          str. G5101]
 gi|320643090|gb|EFX12291.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H-
          str. 493-89]
 gi|320648548|gb|EFX17203.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H-
          str. H 2687]
 gi|320653862|gb|EFX21936.1| flagellar basal body rod protein FlgG [Escherichia coli O55:H7
          str. 3256-97 TW 07815]
 gi|320659342|gb|EFX26911.1| flagellar basal body rod protein FlgG [Escherichia coli O55:H7
          str. USDA 5905]
 gi|320664477|gb|EFX31628.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
          str. LSU-61]
 gi|323156885|gb|EFZ43019.1| flagellar basal-body rod protein FlgG [Escherichia coli EPECa14]
 gi|323163703|gb|EFZ49523.1| flagellar basal-body rod protein FlgG [Escherichia coli E128010]
 gi|323175691|gb|EFZ61285.1| flagellar basal-body rod protein FlgG [Escherichia coli 1180]
 gi|323185799|gb|EFZ71160.1| flagellar basal-body rod protein FlgG [Escherichia coli 1357]
 gi|323190590|gb|EFZ75862.1| flagellar basal-body rod protein FlgG [Escherichia coli RN587/1]
 gi|323379083|gb|ADX51351.1| flagellar basal-body rod protein FlgG [Escherichia coli KO11]
 gi|323937818|gb|EGB34082.1| flagellar basal-body rod protein FlgG [Escherichia coli E1520]
 gi|323942547|gb|EGB38714.1| flagellar basal-body rod protein FlgG [Escherichia coli E482]
 gi|323947620|gb|EGB43624.1| flagellar basal-body rod protein FlgG [Escherichia coli H120]
 gi|323953236|gb|EGB49102.1| flagellar basal-body rod protein FlgG [Escherichia coli H252]
 gi|323957902|gb|EGB53614.1| flagellar basal-body rod protein FlgG [Escherichia coli H263]
 gi|323962677|gb|EGB58255.1| flagellar basal-body rod protein FlgG [Escherichia coli H489]
 gi|323967019|gb|EGB62445.1| flagellar basal-body rod protein FlgG [Escherichia coli M863]
 gi|323973333|gb|EGB68522.1| flagellar basal-body rod protein FlgG [Escherichia coli TA007]
 gi|323976549|gb|EGB71637.1| flagellar basal-body rod protein FlgG [Escherichia coli TW10509]
 gi|324007918|gb|EGB77137.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 57-2]
 gi|324013352|gb|EGB82571.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 60-1]
 gi|324017418|gb|EGB86637.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 117-3]
 gi|324117351|gb|EGC11258.1| flagellar basal-body rod protein FlgG [Escherichia coli E1167]
 gi|326339300|gb|EGD63114.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. 1125]
 gi|326344739|gb|EGD68487.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
          str. 1044]
 gi|327253477|gb|EGE65115.1| flagellar basal-body rod protein FlgG [Escherichia coli STEC_7v]
 gi|330910892|gb|EGH39402.1| flagellar basal-body rod protein FlgG [Escherichia coli AA86]
 gi|331038420|gb|EGI10640.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331045088|gb|EGI17215.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|331055388|gb|EGI27397.1| flagellar basal-body rod protein FlgG [Escherichia coli TA206]
 gi|331060906|gb|EGI32870.1| flagellar basal-body rod protein FlgG [Escherichia coli TA143]
 gi|331065063|gb|EGI36958.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
 gi|331070241|gb|EGI41607.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
 gi|331075558|gb|EGI46856.1| flagellar basal-body rod protein FlgG [Escherichia coli H591]
 gi|331080211|gb|EGI51390.1| flagellar basal-body rod protein FlgG [Escherichia coli H299]
 gi|332102086|gb|EGJ05432.1| flagellar basal-body rod protein FlgG [Shigella sp. D9]
 gi|333004888|gb|EGK24408.1| flagellar basal-body rod protein FlgG [Shigella flexneri VA-6]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|218674651|ref|ZP_03524320.1| flagellar hook protein FlgE [Rhizobium etli GR56]
          Length = 77

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 14/66 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG++ Q+ R+  +S+NIANA TTG       Y+  + SF  ++       +
Sbjct: 3  IFGSMKTAVSGMSAQANRLSTVSDNIANANTTG-------YKAVSTSFSSLVLPSSSGNY 55

Query: 57 GSGGVR 62
           SGGV+
Sbjct: 56 NSGGVQ 61


>gi|90021853|ref|YP_527680.1| flagellar basal body rod protein FlgG [Saccharophagus degradans
          2-40]
 gi|89951453|gb|ABD81468.1| Flagellar basal-body rod FlgG [Saccharophagus degradans 2-40]
          Length = 261

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+ +++ +GLA Q  R+  I+ N+ANA T G       ++R    FE++++
Sbjct: 3  AALYVSKTGLAAQDTRLTTIANNLANASTVG-------FKRDRAVFEDLLY 46


>gi|16760055|ref|NP_455672.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. CT18]
 gi|16764535|ref|NP_460150.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhimurium str. LT2]
 gi|29142174|ref|NP_805516.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. Ty2]
 gi|56413834|ref|YP_150909.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179696|ref|YP_216113.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Choleraesuis str. SC-B67]
 gi|161614598|ref|YP_001588563.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Paratyphi B str. SPB7]
 gi|167553033|ref|ZP_02346783.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA29]
 gi|167994043|ref|ZP_02575135.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234105|ref|ZP_02659163.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Kentucky str. CDC 191]
 gi|168237261|ref|ZP_02662319.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. SL480]
 gi|168244778|ref|ZP_02669710.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL486]
 gi|168264028|ref|ZP_02686001.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Hadar str. RI_05P066]
 gi|168467131|ref|ZP_02700973.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Newport str. SL317]
 gi|168822622|ref|ZP_02834622.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Weltevreden str. HI_N05-537]
 gi|194446556|ref|YP_002040433.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Newport str. SL254]
 gi|194450313|ref|YP_002045178.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL476]
 gi|194472223|ref|ZP_03078207.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Kentucky str. CVM29188]
 gi|194734396|ref|YP_002114178.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. CVM19633]
 gi|197251031|ref|YP_002146864.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Agona str. SL483]
 gi|197262058|ref|ZP_03162132.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA23]
 gi|197362757|ref|YP_002142394.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Paratyphi A str. AKU_12601]
 gi|200390304|ref|ZP_03216915.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Virchow str. SL491]
 gi|207857313|ref|YP_002243964.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Enteritidis str. P125109]
 gi|213424682|ref|ZP_03357447.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. E02-1180]
 gi|213582039|ref|ZP_03363865.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. E98-0664]
 gi|213613179|ref|ZP_03371005.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. E98-2068]
 gi|213648928|ref|ZP_03378981.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. J185]
 gi|213865503|ref|ZP_03387622.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. M223]
 gi|224584317|ref|YP_002638115.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Paratyphi C strain RKS4594]
 gi|238911001|ref|ZP_04654838.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Tennessee str. CDC07-0191]
 gi|289828578|ref|ZP_06546403.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. E98-3139]
 gi|60392289|sp|P0A1J3|FLGG_SALTY RecName: Full=Flagellar basal-body rod protein flgG; AltName:
          Full=Distal rod protein
 gi|60392290|sp|P0A1J4|FLGG_SALTI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
          Full=Distal rod protein
 gi|25298926|pir||AD0640 flagellar basal-body rod protein FlgG (distal rod protein)
          [imported] - Salmonella enterica subsp. enterica
          serovar Typhi (strain CT18)
 gi|47677|emb|CAA36314.1| flgG protein product (AA 1-260) [Salmonella enterica subsp.
          enterica serovar Typhimurium]
 gi|16419696|gb|AAL20109.1| flagellar biosynthesis protein [Salmonella enterica subsp.
          enterica serovar Typhimurium str. LT2]
 gi|16502349|emb|CAD08303.1| flagellar basal-body rod protein FlgG (distal rod protein)
          [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29137804|gb|AAO69365.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. Ty2]
 gi|56128091|gb|AAV77597.1| flagellar basal-body rod protein FlgG (distal rod protein)
          [Salmonella enterica subsp. enterica serovar Paratyphi
          A str. ATCC 9150]
 gi|62127329|gb|AAX65032.1| flagellar biosynthesis, cell-distal portion of basal-body rod
          [Salmonella enterica subsp. enterica serovar
          Choleraesuis str. SC-B67]
 gi|161363962|gb|ABX67730.1| hypothetical protein SPAB_02348 [Salmonella enterica subsp.
          enterica serovar Paratyphi B str. SPB7]
 gi|194405219|gb|ACF65441.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Newport str. SL254]
 gi|194408617|gb|ACF68836.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL476]
 gi|194458587|gb|EDX47426.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Kentucky str. CVM29188]
 gi|194709898|gb|ACF89119.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. CVM19633]
 gi|195630467|gb|EDX49093.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Newport str. SL317]
 gi|197094234|emb|CAR59739.1| flagellar basal-body rod protein FlgG (distal rod protein)
          [Salmonella enterica subsp. enterica serovar Paratyphi
          A str. AKU_12601]
 gi|197214734|gb|ACH52131.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Agona str. SL483]
 gi|197240313|gb|EDY22933.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA23]
 gi|197289797|gb|EDY29158.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. SL480]
 gi|199602749|gb|EDZ01295.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Virchow str. SL491]
 gi|205322431|gb|EDZ10270.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA29]
 gi|205328014|gb|EDZ14778.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331903|gb|EDZ18667.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Kentucky str. CDC 191]
 gi|205336447|gb|EDZ23211.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL486]
 gi|205341038|gb|EDZ27802.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Weltevreden str. HI_N05-537]
 gi|205347402|gb|EDZ34033.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Hadar str. RI_05P066]
 gi|206709116|emb|CAR33449.1| flagellar basal-body rod protein FlgG (distal rod protein)
          [Salmonella enterica subsp. enterica serovar
          Enteritidis str. P125109]
 gi|224468844|gb|ACN46674.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Paratyphi C strain RKS4594]
 gi|261246390|emb|CBG24199.1| flagellar basal-body rod protein FlgG (distal rod protein)
          [Salmonella enterica subsp. enterica serovar
          Typhimurium str. D23580]
 gi|267992953|gb|ACY87838.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhimurium str. 14028S]
 gi|301157720|emb|CBW17212.1| flagellar basal-body rod protein FlgG (distal rod protein)
          [Salmonella enterica subsp. enterica serovar
          Typhimurium str. SL1344]
 gi|312912166|dbj|BAJ36140.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhimurium str. T000240]
 gi|320086381|emb|CBY96154.1| Flagellar basal-body rod protein flgG Distal rod protein
          [Salmonella enterica subsp. enterica serovar
          Weltevreden str. 2007-60-3289-1]
 gi|321223797|gb|EFX48860.1| Flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhimurium str. TN061786]
 gi|322616549|gb|EFY13458.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 315996572]
 gi|322620510|gb|EFY17374.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 495297-1]
 gi|322622504|gb|EFY19349.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 495297-3]
 gi|322629655|gb|EFY26430.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 495297-4]
 gi|322632625|gb|EFY29371.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 515920-1]
 gi|322636880|gb|EFY33583.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 515920-2]
 gi|322641582|gb|EFY38220.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 531954]
 gi|322644072|gb|EFY40618.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650028|gb|EFY46446.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. OH_2009072675]
 gi|322653953|gb|EFY50276.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658485|gb|EFY54747.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 19N]
 gi|322663343|gb|EFY59545.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 81038-01]
 gi|322670077|gb|EFY66217.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674859|gb|EFY70950.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 414877]
 gi|322676671|gb|EFY72738.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 366867]
 gi|322682593|gb|EFY78612.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 413180]
 gi|322686654|gb|EFY82633.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 446600]
 gi|322714166|gb|EFZ05737.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Choleraesuis str. A50]
 gi|323129449|gb|ADX16879.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhimurium str. 4/74]
 gi|323195768|gb|EFZ80944.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 609458-1]
 gi|323198340|gb|EFZ83444.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 556150-1]
 gi|323209179|gb|EFZ94116.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 507440-20]
 gi|323209683|gb|EFZ94612.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 556152]
 gi|323217861|gb|EGA02576.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB101509-0077]
 gi|323222149|gb|EGA06533.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB102109-0047]
 gi|323224921|gb|EGA09179.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB110209-0055]
 gi|323229663|gb|EGA13786.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB111609-0052]
 gi|323232888|gb|EGA16984.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 2009083312]
 gi|323240623|gb|EGA24665.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 2009085258]
 gi|323242937|gb|EGA26958.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. 315731156]
 gi|323250254|gb|EGA34143.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2009159199]
 gi|323252629|gb|EGA36467.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008282]
 gi|323258843|gb|EGA42496.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008283]
 gi|323261032|gb|EGA44625.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008284]
 gi|323266941|gb|EGA50426.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008285]
 gi|323269982|gb|EGA53431.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008287]
 gi|332988070|gb|AEF07053.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhimurium str. UK-1]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|198244335|ref|YP_002215958.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Dublin str. CT_02021853]
 gi|197938851|gb|ACH76184.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Dublin str. CT_02021853]
 gi|326623706|gb|EGE30051.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Dublin str. 3246]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|145297456|ref|YP_001140297.1| lateral flagellar basal-body rod protein LfgG [Aeromonas
          salmonicida subsp. salmonicida A449]
 gi|142850228|gb|ABO88549.1| lateral flagellar basal-body rod protein LfgG [Aeromonas
          salmonicida subsp. salmonicida A449]
          Length = 261

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+  ++ +GL+ Q A+M  IS N+AN  T G       ++R  ++FE++ +
Sbjct: 3  AALWVSKTGLSAQDAKMASISNNLANVNTVG-------FKRDRVAFEDLFY 46


>gi|24112486|ref|NP_706996.1| flagellar basal body rod protein FlgG [Shigella flexneri 2a str.
          301]
 gi|30062614|ref|NP_836785.1| flagellar basal body rod protein FlgG [Shigella flexneri 2a str.
          2457T]
 gi|24051372|gb|AAN42703.1| flagellar basal body rod protein flgG [Shigella flexneri 2a str.
          301]
 gi|30040860|gb|AAP16591.1| flagellar basal body rod protein flgG [Shigella flexneri 2a str.
          2457T]
 gi|281600496|gb|ADA73480.1| Flagellar basal body rod protein flgG [Shigella flexneri 2002017]
 gi|313650470|gb|EFS14877.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2a str.
          2457T]
 gi|332758238|gb|EGJ88561.1| flagellar basal-body rod protein FlgG [Shigella flexneri 4343-70]
 gi|332759659|gb|EGJ89964.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2747-71]
 gi|332761424|gb|EGJ91708.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-671]
 gi|332767686|gb|EGJ97879.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2930-71]
 gi|333005399|gb|EGK24917.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-218]
 gi|333019426|gb|EGK38709.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-304]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|283833628|ref|ZP_06353369.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
          29220]
 gi|291071311|gb|EFE09420.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
          29220]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|82544456|ref|YP_408403.1| flagellar basal body rod protein FlgG [Shigella boydii Sb227]
 gi|81245867|gb|ABB66575.1| cell-distal portion of basal-body rod [Shigella boydii Sb227]
 gi|320186975|gb|EFW61688.1| Flagellar basal-body rod protein FlgG [Shigella flexneri CDC
          796-83]
 gi|332094081|gb|EGI99133.1| flagellar basal-body rod protein FlgG [Shigella boydii 3594-74]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|74101660|gb|AAZ99750.1| FlgGL [Aeromonas hydrophila]
          Length = 275

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+  ++ +GL+ Q A+M  IS N+AN  T G       ++R  ++FE++ +
Sbjct: 17 AALWVSKTGLSAQDAKMASISNNLANVNTVG-------FKRDRVAFEDLFY 60


>gi|204930805|ref|ZP_03221678.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Javiana str. GA_MM04042433]
 gi|204320264|gb|EDZ05468.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Javiana str. GA_MM04042433]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|319787119|ref|YP_004146594.1| flagellar basal-body rod protein FlgG [Pseudoxanthomonas
          suwonensis 11-1]
 gi|317465631|gb|ADV27363.1| flagellar basal-body rod protein FlgG [Pseudoxanthomonas
          suwonensis 11-1]
          Length = 261

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           +A +GL  Q  RM +++ N+AN  TTG       ++R   +FE++++
Sbjct: 6  WVAKTGLDAQQTRMSVVANNLANTNTTG-------FKRDRANFEDLLY 46


>gi|197285508|ref|YP_002151380.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227355999|ref|ZP_03840391.1| flagellar basal-body rod protein (distal rod protein) [Proteus
          mirabilis ATCC 29906]
 gi|194682995|emb|CAR43442.1| flagellar basal-body rod protein (distal rod protein) [Proteus
          mirabilis HI4320]
 gi|227163987|gb|EEI48889.1| flagellar basal-body rod protein (distal rod protein) [Proteus
          mirabilis ATCC 29906]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|242238971|ref|YP_002987152.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech703]
 gi|242131028|gb|ACS85330.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech703]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|268589980|ref|ZP_06124201.1| flagellar basal-body rod protein FlgG [Providencia rettgeri DSM
          1131]
 gi|291314698|gb|EFE55151.1| flagellar basal-body rod protein FlgG [Providencia rettgeri DSM
          1131]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   + +IS N+AN  T G       ++R+   FE++M+
Sbjct: 1  MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNG-------FKRQRAVFEDLMY 46


>gi|194432508|ref|ZP_03064795.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 1012]
 gi|194419395|gb|EDX35477.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 1012]
 gi|332092914|gb|EGI97982.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae
          155-74]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|333008281|gb|EGK27755.1| flagellar basal-body rod protein flgG [Shigella flexneri K-272]
 gi|333019771|gb|EGK39043.1| flagellar basal-body rod protein flgG [Shigella flexneri K-227]
          Length = 163

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|331652131|ref|ZP_08353150.1| flagellar basal-body rod protein FlgG [Escherichia coli M718]
 gi|331050409|gb|EGI22467.1| flagellar basal-body rod protein FlgG [Escherichia coli M718]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|21672606|ref|NP_660673.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
          Sg (Schizaphis graminum)]
 gi|25008454|sp|Q8K9K4|FLGG_BUCAP RecName: Full=Flagellar basal-body rod protein flgG; AltName:
          Full=Distal rod protein
 gi|21623237|gb|AAM67884.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
          Sg (Schizaphis graminum)]
          Length = 260

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +GL  Q   M +IS N+AN  T G       ++R    FE++M+
Sbjct: 1  MIPSLWISKTGLDAQQINMNVISNNLANVSTNG-------FKRSRAVFEDLMY 46


>gi|307945688|ref|ZP_07661024.1| flagellar basal body FlaE domain protein [Roseibium sp.
          TrichSKD4]
 gi|307771561|gb|EFO30786.1| flagellar basal body FlaE domain protein [Roseibium sp.
          TrichSKD4]
          Length = 459

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 7/54 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          SGL  QS  ++ IS N+AN++TTG       Y+R   +F +++ G G  +  ++
Sbjct: 12 SGLTAQSRALENISGNVANSQTTG-------YKRLDTTFADLVSGGGSRQATQV 58


>gi|300114797|ref|YP_003761372.1| flagellar basal-body rod protein FlgG [Nitrosococcus watsonii
          C-113]
 gi|299540734|gb|ADJ29051.1| flagellar basal-body rod protein FlgG [Nitrosococcus watsonii
          C-113]
          Length = 261

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           IA +GL  Q  RM  IS N+AN  TTG       ++R    FE++++
Sbjct: 6  WIAKTGLDAQQTRMATISNNLANVNTTG-------FKRDRAVFEDLLY 46


>gi|211639036|emb|CAR67650.1| flagellar hook protein flge [Photorhabdus asymbiotica subsp.
          asymbiotica ATCC 43949]
          Length = 72

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVRVKKIGVDQS 71
          SGL   +A + +I  NIANA T G       ++  + +F ++  GS  G+ VK  G++Q 
Sbjct: 8  SGLNAAAANLDVIGNNIANAATYG-------FKSSSAAFADIFAGSQVGLGVKMSGINQ- 59

Query: 72 TFVEEFDPGHP 82
               F  G P
Sbjct: 60 ----NFKDGTP 66


>gi|323165587|gb|EFZ51374.1| flagellar basal-body rod protein flgG [Shigella sonnei 53G]
          Length = 143

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|89056664|ref|YP_512115.1| hypothetical protein Jann_4173 [Jannaschia sp. CCS1]
 gi|88866213|gb|ABD57090.1| flagellar hook protein FlgE putative [Jannaschia sp. CCS1]
          Length = 452

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 14/58 (24%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVRV 63
          +GL+V ++R+  I++NIAN+ T G       Y+R T  F  ++       + +GGVRV
Sbjct: 25 AGLSVNASRLATIADNIANSGTNG-------YKRATADFSSMVIDQGGGTYSAGGVRV 75


>gi|77165836|ref|YP_344361.1| hypothetical protein Noc_2373 [Nitrosococcus oceani ATCC 19707]
 gi|254434083|ref|ZP_05047591.1| flagellar basal-body rod protein FlgG [Nitrosococcus oceani
          AFC27]
 gi|76884150|gb|ABA58831.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207090416|gb|EDZ67687.1| flagellar basal-body rod protein FlgG [Nitrosococcus oceani
          AFC27]
          Length = 261

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           IA +GL  Q  RM  IS N+AN  TTG       ++R    FE++++
Sbjct: 6  WIAKTGLDAQQTRMATISNNLANVNTTG-------FKRDRAVFEDLLY 46


>gi|332162899|ref|YP_004299476.1| Lateral flagellar rod protein [Yersinia enterocolitica subsp.
          palearctica 105.5R(r)]
 gi|318604254|emb|CBY25752.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
          subsp. palearctica Y11]
 gi|325667129|gb|ADZ43773.1| Lateral flagellar rod protein [Yersinia enterocolitica subsp.
          palearctica 105.5R(r)]
 gi|330863349|emb|CBX73472.1| flagellar basal-body rod protein flgG [Yersinia enterocolitica
          W22703]
          Length = 261

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           ++ +GLA Q A+M  IS N+AN  T       D ++R  + FE++ +
Sbjct: 6  WVSKTGLAAQDAKMNAISNNLANVNT-------DGFKRDRVVFEDLFY 46


>gi|226327746|ref|ZP_03803264.1| hypothetical protein PROPEN_01619 [Proteus penneri ATCC 35198]
 gi|225203450|gb|EEG85804.1| hypothetical protein PROPEN_01619 [Proteus penneri ATCC 35198]
          Length = 406

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 8/60 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVRVKKIGVDQS 71
          SGL   +A +  I  NI+N+ T G       ++  ++SF +V  GSG G+ VK  G+ Q+
Sbjct: 8  SGLNAAAANLDTIGNNISNSATYG-------FKGASVSFADVFAGSGAGLGVKVAGISQN 60


>gi|146305248|ref|YP_001185713.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina ymp]
 gi|145573449|gb|ABP82981.1| flagellar basal-body rod protein FlgC [Pseudomonas mendocina ymp]
          Length = 142

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--------GSGG 60
            IA S +  Q+ R+  ++ N+ANA +       D Y+ +   F  V +        G GG
Sbjct: 8   RIAGSSMNAQTVRLNTVASNLANADSAAAKA-EDVYQARKPVFAAVYNNDELTRGVGMGG 66

Query: 61  VRVKKIGVDQSTF--VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+ + V  +    V  ++P +P+A+  G V Y +++ + E  DM    R +  +++ +
Sbjct: 67  AHVQVLDVVTAGREPVRRYEPDNPLADDQGYVFYADIDQIEEMTDMMSATRSFETSVEVL 126

Query: 119 KQSHDMMTTTLDL 131
            +   M    L L
Sbjct: 127 NRLKSMQQGLLKL 139


>gi|85058013|ref|YP_453715.1| flagellar basal body rod protein FlgG [Sodalis glossinidius str.
          'morsitans']
 gi|84778533|dbj|BAE73310.1| flagellar basal-body rod protein FlgG [Sodalis glossinidius str.
          'morsitans']
          Length = 260

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++ S  IA +GL  Q   M +IS NIAN  T G       ++R+   FE++++
Sbjct: 1  MMRSLMIAKTGLEAQQTNMDVISNNIANVSTMG-------FKRQQAVFEDLLY 46


>gi|54307272|ref|YP_128292.1| putative FlgG flagellar basal-body rod protein [Photobacterium
          profundum SS9]
 gi|46911692|emb|CAG18490.1| Putative FlgG flagellar basal-body rod protein [Photobacterium
          profundum SS9]
          Length = 261

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+  I+ +GLA Q  +MQ+IS N+AN  T G       +++    FE++ +
Sbjct: 3  AALWISKTGLAAQDTQMQVISNNLANVNTVG-------FKQDRAVFEDLFY 46


>gi|330501135|ref|YP_004378004.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
 gi|328915421|gb|AEB56252.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
          Length = 142

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 11/133 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--------GSGG 60
            IA S +  Q+ R+  ++ N+ANA +   +   D Y+ +   F  V +        G GG
Sbjct: 8   RIAGSSMNAQTVRLNTVASNLANADSAAASA-EDVYQARKPVFAAVYNNDQLTRGVGMGG 66

Query: 61  VRVKKIGVDQSTF--VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+ + V  +    V  ++P +P+A+  G V Y +++ + E  DM    R +  +++ +
Sbjct: 67  AHVQVLDVVTAGREPVRRYEPDNPLADDKGYVFYADIDQIEEMTDMMSATRSFETSVEVL 126

Query: 119 KQSHDMMTTTLDL 131
            +   M    L L
Sbjct: 127 NRLKSMQQGLLKL 139


>gi|300854216|ref|YP_003779200.1| putative flagellar hook protein FlgE [Clostridium ljungdahlii DSM
          13528]
 gi|300434331|gb|ADK14098.1| predicted flagellar hook protein FlgE [Clostridium ljungdahlii
          DSM 13528]
          Length = 323

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 19/77 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
          ++ S + A SGL V   ++ + S+NIAN+ TTG       ++ K + FE+++        
Sbjct: 1  MLPSLYTAISGLRVNQQKLNVTSDNIANSSTTG-------FKSKNMIFEDMLSQNLSDPS 53

Query: 57 -----GSGGVRVKKIGV 68
               G GG+  ++ G+
Sbjct: 54 APVDGGLGGINARQSGL 70


>gi|294675564|ref|YP_003576179.1| flagellar hook protein FlgE [Rhodobacter capsulatus SB 1003]
 gi|294474384|gb|ADE83772.1| flagellar hook protein FlgE [Rhodobacter capsulatus SB 1003]
          Length = 452

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 16/62 (25%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---------HGSGGVRV 63
          +GLA  + R+  IS+NIAN+ T G       Y+R T  FE ++         + +GGVR 
Sbjct: 12 AGLAANATRLATISDNIANSGTYG-------YKRATADFESMVLTQARSSGTYSAGGVRA 64

Query: 64 KK 65
            
Sbjct: 65 SS 66


>gi|256370953|ref|YP_003108777.1| protein of unknown function DUF1078 domain protein [Acidimicrobium
           ferrooxidans DSM 10331]
 gi|256007537|gb|ACU53104.1| protein of unknown function DUF1078 domain protein [Acidimicrobium
           ferrooxidans DSM 10331]
          Length = 144

 Score = 35.4 bits (80), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 16/133 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHG----- 57
           L  +  +A +G+  +   +  I+ N+AN      T  + P Y+ + +  + V        
Sbjct: 3   LFPAIDVAATGVTTEQTWLDTIASNVANVNDQSAT--NQPIYQEQEVLVQPVETSPVTGV 60

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV+V  I       V  +DP   +ANA G VK P +++  +  ++     
Sbjct: 61  ADTTTTPVGSGVQVDAIVTPLPNGVLSYDPTSTLANAQGYVKTPGISLAQQLGNLVNAQT 120

Query: 110 LYMANLQTIKQSH 122
            Y AN+  I Q+ 
Sbjct: 121 SYQANVAVINQAK 133


>gi|323174793|gb|EFZ60408.1| flagellar basal-body rod protein flgG domain protein [Escherichia
          coli LT-68]
          Length = 79

 Score = 35.4 bits (80), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|220932528|ref|YP_002509436.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H
           168]
 gi|219993838|gb|ACL70441.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H
           168]
          Length = 131

 Score = 35.0 bits (79), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 32/133 (24%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--GSGGVRVKKIGVDQS 71
           GL   S R + +++NIAN     DTP    Y+RK + F   +    S   ++K       
Sbjct: 11  GLDGASKRHRALADNIANV----DTPN---YKRKDVDFVSTLKSIASQNAKLK------- 56

Query: 72  TFVEEFDPGHPVANASGIVKYP--------------NVNVLVETADMRETNRLYMANLQT 117
             +E  D GH     S +  +               NV++ VE A++ + N  Y   +Q 
Sbjct: 57  --LETTDDGHISGTGSVLKPFKEYRITNTSYRNDGNNVDIEVEMAELAKNNLYYNTLVQQ 114

Query: 118 IKQSHDMMTTTLD 130
           I Q   ++  T+D
Sbjct: 115 ISQKFKILNETID 127


>gi|329901232|ref|ZP_08272757.1| Flagellar basal-body rod protein flgG [Oxalobacteraceae bacterium
          IMCC9480]
 gi|327549164|gb|EGF33756.1| Flagellar basal-body rod protein flgG [Oxalobacteraceae bacterium
          IMCC9480]
          Length = 260

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +GL  Q  +M +IS N+AN  T+G       ++R    FE++++
Sbjct: 1  MIRSLWISKTGLEAQQTQMDVISNNLANVSTSG-------FKRSRAVFEDLLY 46


>gi|295097201|emb|CBK86291.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria
          [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 260

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   F+++++
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVNTNG-------FKRQRAVFQDLLY 46


>gi|148546709|ref|YP_001266811.1| flagellar basal body rod protein FlgG [Pseudomonas putida F1]
 gi|148510767|gb|ABQ77627.1| flagellar basal-body rod protein FlgG [Pseudomonas putida F1]
          Length = 261

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 12/87 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F+++++     ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFQDLLY-----QI 48

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          K+    QST   E   G  V     IV
Sbjct: 49 KRQPGAQSTQDSELPSGLQVGTGVRIV 75


>gi|238752865|ref|ZP_04614330.1| Lateral flagellar rod protein (FlgG-like) [Yersinia rohdei ATCC
          43380]
 gi|238708904|gb|EEQ01157.1| Lateral flagellar rod protein (FlgG-like) [Yersinia rohdei ATCC
          43380]
          Length = 261

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           ++ +GLA Q A+M  IS N+AN  T       D ++R  + FE++ +
Sbjct: 6  WVSKTGLAAQDAKMNAISNNLANVNT-------DGFKRDRVVFEDLFY 46


>gi|222084885|ref|YP_002543414.1| flagellar hook protein [Agrobacterium radiobacter K84]
 gi|221722333|gb|ACM25489.1| flagellar hook protein [Agrobacterium radiobacter K84]
          Length = 425

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 14/66 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG+  Q+ R+  +S+NIAN+ TTG       Y++ + SF  ++       +
Sbjct: 3  IFGSMKTAISGMNAQANRLATVSDNIANSSTTG-------YKQASTSFSSLVLPSSSGNY 55

Query: 57 GSGGVR 62
           SGGV 
Sbjct: 56 NSGGVE 61


>gi|148980302|ref|ZP_01815989.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
 gi|145961321|gb|EDK26631.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
          Length = 408

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 11/66 (16%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGVRVK 64
          S  IA SGL   ++ +  IS NIAN  TTG       ++     F  V  GS  GGV V 
Sbjct: 2  SFSIALSGLNASNSELNTISNNIANVSTTG-------FKESRTEFASVYSGSEAGGVEV- 53

Query: 65 KIGVDQ 70
           +GV Q
Sbjct: 54 -VGVSQ 58


>gi|94495409|ref|ZP_01301989.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
 gi|94424797|gb|EAT09818.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
          Length = 262

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+ H+A +GL  Q+ +M++I+ N+AN  TTG       +++    FE + +
Sbjct: 4  AALHVARTGLDAQNTKMRVIANNLANVNTTG-------FKKDRADFETLAY 47



 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 15/95 (15%)

Query: 41  SDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI----------V 90
           S+P +   I     M+ SG   ++ IG +    VE    G P    +G+          +
Sbjct: 166 SEPSQLGQIELASFMNPSG---LQSIGGN--LLVETAASGTPQVGVAGLEGRGVIRSGYL 220

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  NVN++ E  DM ET R Y  N + IK + +M+
Sbjct: 221 ETSNVNIVEELVDMIETQRAYEVNSKMIKATDEML 255


>gi|167630286|ref|YP_001680785.1| flagellar basal-body rod protein flgb, putative [Heliobacterium
          modesticaldum Ice1]
 gi|167593026|gb|ABZ84774.1| flagellar basal-body rod protein flgb, putative [Heliobacterium
          modesticaldum Ice1]
          Length = 137

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 7/40 (17%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          GL   S R Q+I++N+AN     DTPG   Y+RK + FE+
Sbjct: 16 GLDAASTRHQVIADNLANV----DTPG---YKRKEVQFED 48


>gi|254473478|ref|ZP_05086875.1| flagellar hook protein FlgE [Pseudovibrio sp. JE062]
 gi|211957594|gb|EEA92797.1| flagellar hook protein FlgE [Pseudovibrio sp. JE062]
          Length = 397

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 8/63 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          SG+  QS ++  +++NI+NA T G       Y+R   +F  ++ GSGG    + G+  +T
Sbjct: 12 SGMNAQSNKLSTVADNISNANTVG-------YKRYKTAFSSLV-GSGGTSGHESGIVNTT 63

Query: 73 FVE 75
           V+
Sbjct: 64 VVQ 66


>gi|209547530|ref|YP_002279448.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii
          WSM2304]
 gi|209538774|gb|ACI58708.1| protein of unknown function DUF1078 domain protein [Rhizobium
          leguminosarum bv. trifolii WSM2304]
          Length = 430

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 14/68 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG++ Q+ R+  +S+NIANA T G       Y+  + SF  ++       +
Sbjct: 3  IFGSMKTAVSGMSAQANRLSTVSDNIANANTVG-------YKAVSTSFSSLVLPSSSGNY 55

Query: 57 GSGGVRVK 64
           SGGV+  
Sbjct: 56 NSGGVQTS 63


>gi|149191153|ref|ZP_01869411.1| flagellar hook protein E [Vibrio shilonii AK1]
 gi|148834991|gb|EDL51970.1| flagellar hook protein E [Vibrio shilonii AK1]
          Length = 408

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 11/66 (16%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGVRVK 64
          S  IA SGL   ++ +  IS NIAN  TTG       ++     F  V  GS  GGV V 
Sbjct: 2  SFSIALSGLNASNSELNTISNNIANVSTTG-------FKESRTEFASVYSGSEAGGVEV- 53

Query: 65 KIGVDQ 70
           +GV Q
Sbjct: 54 -VGVSQ 58


>gi|86360902|ref|YP_472789.1| flagellar hook protein FlgE [Rhizobium etli CFN 42]
 gi|86285004|gb|ABC94062.1| flagellar hook protein [Rhizobium etli CFN 42]
          Length = 430

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 14/68 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG++ Q+ R+  +S+NIANA T G       Y+  + SF  ++       +
Sbjct: 3  IFGSMKTAVSGMSAQANRLSTVSDNIANANTVG-------YKAVSTSFSSLVLPSSSGNY 55

Query: 57 GSGGVRVK 64
           SGGV+  
Sbjct: 56 NSGGVQTS 63


>gi|71906391|ref|YP_283978.1| flagellar hook protein FlgE [Dechloromonas aromatica RCB]
 gi|71846012|gb|AAZ45508.1| Flagellar basal body rod protein:Protein of unknown function
          DUF1078:Flagellar basal body FlaE [Dechloromonas
          aromatica RCB]
          Length = 442

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 10/72 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKKIGVD 69
          SGL   S  + + S NIANA T G       ++  +  F +V   S   GG     IGV 
Sbjct: 8  SGLNTSSKALDVTSNNIANASTVG-------FKSASTHFADVYAASLAGGGASQVGIGVS 60

Query: 70 QSTFVEEFDPGH 81
           S   ++F  G+
Sbjct: 61 ASAIAQQFTQGN 72


>gi|309788146|ref|ZP_07682752.1| flagellar basal-body rod flgG domain protein [Shigella
          dysenteriae 1617]
 gi|308923998|gb|EFP69499.1| flagellar basal-body rod flgG domain protein [Shigella
          dysenteriae 1617]
          Length = 82

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|242238969|ref|YP_002987150.1| flagellar hook protein FlgE [Dickeya dadantii Ech703]
 gi|242131026|gb|ACS85328.1| flagellar basal body FlaE domain protein [Dickeya dadantii
          Ech703]
          Length = 399

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 13/77 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVRVKKIGVDQS 71
          SGL   S+ + +I  NIAN+ TTG       ++  ++SF ++   S  G+ VK   V Q+
Sbjct: 8  SGLNAASSNLDVIGNNIANSETTG-------FKSASVSFADIYADSAVGLGVKVASVTQN 60

Query: 72 TF----VEEFDPGHPVA 84
           F    VE  D G  VA
Sbjct: 61 -FTDGTVESTDVGTDVA 76


>gi|114799551|ref|YP_758981.1| flagellar hook protein FlgE [Hyphomonas neptunium ATCC 15444]
 gi|114739725|gb|ABI77850.1| flagellar hook protein FlgE [Hyphomonas neptunium ATCC 15444]
          Length = 434

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 14/57 (24%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVRV 63
          GL+V   R+  IS+NIAN+ T G       Y+R  + F  ++       + +GGVRV
Sbjct: 13 GLSVNGTRLATISDNIANSGTYG-------YKRSAVDFSSMVLQQKTSAYAAGGVRV 62


>gi|317047693|ref|YP_004115341.1| flagellar basal-body rod protein FlgG [Pantoea sp. At-9b]
 gi|316949310|gb|ADU68785.1| flagellar basal-body rod protein FlgG [Pantoea sp. At-9b]
          Length = 260

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R    FE++M+
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRSRAVFEDLMY 46


>gi|304310887|ref|YP_003810485.1| Flagellar basal-body rod protein [gamma proteobacterium HdN1]
 gi|301796620|emb|CBL44832.1| Flagellar basal-body rod protein [gamma proteobacterium HdN1]
          Length = 261

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+  I+ SGL+ Q  R+  IS N+AN  TTG       ++R    F+++++
Sbjct: 3  AALWISKSGLSAQDLRLSTISNNLANVSTTG-------FKRDIAVFQDLLY 46


>gi|170722889|ref|YP_001750577.1| flagellar basal body rod protein FlgG [Pseudomonas putida W619]
 gi|169760892|gb|ACA74208.1| flagellar basal-body rod protein FlgG [Pseudomonas putida W619]
          Length = 261

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 12/87 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F+++++     ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFQDLLY-----QI 48

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          K+    QST   E   G  V     IV
Sbjct: 49 KRQPGAQSTQDSELPSGLQVGTGVRIV 75


>gi|238758108|ref|ZP_04619288.1| Flagellar basal-body rod protein flgG [Yersinia aldovae ATCC
          35236]
 gi|238703646|gb|EEP96183.1| Flagellar basal-body rod protein flgG [Yersinia aldovae ATCC
          35236]
          Length = 260

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|209963559|ref|YP_002296474.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
 gi|209957025|gb|ACI97661.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
          Length = 434

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 21/74 (28%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------HGSGGVR-- 62
          SGLA QSA+   IS+NI+N+ T G       Y+R  + F  ++        + +GGV+  
Sbjct: 12 SGLAAQSAKFAAISDNISNSSTVG-------YKRSGVQFSTLVTSASSPGSYSAGGVQAD 64

Query: 63 ----VKKIGVDQST 72
              V + G+ Q+T
Sbjct: 65 LHTEVSRGGIVQAT 78


>gi|42526517|ref|NP_971615.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC
           35405]
 gi|41816710|gb|AAS11496.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC
           35405]
          Length = 270

 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           P  PV    G ++  NVNV+ E   M E NR Y AN ++I Q+ D M   L
Sbjct: 215 PSRPVV-VQGFIEASNVNVVNEMVRMIEVNRAYEANQKSI-QAEDTMMAKL 263


>gi|32490792|ref|NP_871046.1| flagellar basal body rod protein FlgG [Wigglesworthia glossinidia
          endosymbiont of Glossina brevipalpis]
 gi|25165998|dbj|BAC24189.1| flgG [Wigglesworthia glossinidia endosymbiont of Glossina
          brevipalpis]
          Length = 260

 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS NI+N  T G       ++R+   FE++++
Sbjct: 1  MIRSLAIAKTGLEAQQINMDVISNNISNVSTNG-------FKRQKAIFEDLLY 46


>gi|329297209|ref|ZP_08254545.1| Flagellar basal-body rod protein flgG [Plautia stali symbiont]
          Length = 260

 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R    FE++M+
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRSRAVFEDLMY 46


>gi|89067518|ref|ZP_01155031.1| flagellar hook-associated protein [Oceanicola granulosus
          HTCC2516]
 gi|89047087|gb|EAR53141.1| flagellar hook-associated protein [Oceanicola granulosus
          HTCC2516]
          Length = 478

 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 9/56 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          A SGL V S R +I+S NIANA T G       Y R++++    M   GGVR   +
Sbjct: 10 ALSGLEVASRRAEIVSGNIANALTEG-------YGRRSLAVSSTML--GGVRADGV 56


>gi|325473455|gb|EGC76650.1| flagellar basal-body rod protein FlgG [Treponema denticola F0402]
          Length = 270

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           P  PV    G ++  NVNV+ E   M E NR Y AN ++I Q+ D M   L
Sbjct: 215 PSRPVV-VQGFIEASNVNVVNEMVRMIEVNRAYEANQKSI-QAEDTMMAKL 263


>gi|259907636|ref|YP_002647992.1| Flagellar basal-body rod protein, FlgG [Erwinia pyrifoliae
          Ep1/96]
 gi|224963258|emb|CAX54742.1| Flagellar basal-body rod protein, FlgG [Erwinia pyrifoliae
          Ep1/96]
 gi|283477478|emb|CAY73394.1| Flagellar basal-body rod protein flgG [Erwinia pyrifoliae DSM
          12163]
          Length = 260

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  +TG       ++R+   F+++++
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTG-------FKRQRAVFQDLLY 46


>gi|254470088|ref|ZP_05083492.1| flagellar hook protein [Pseudovibrio sp. JE062]
 gi|211960399|gb|EEA95595.1| flagellar hook protein [Pseudovibrio sp. JE062]
          Length = 561

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 7/56 (12%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          A +GL  QS  ++ IS N+AN+ TTG       Y+R   SF +++  +G  + +++
Sbjct: 10 ATTGLDAQSKALENISGNVANSSTTG-------YKRLDTSFSDLVSSTGSRQAEQV 58


>gi|126738557|ref|ZP_01754262.1| flagellar hook protein FlgE, putative [Roseobacter sp. SK209-2-6]
 gi|126720356|gb|EBA17062.1| flagellar hook protein FlgE, putative [Roseobacter sp. SK209-2-6]
          Length = 446

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 9/69 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGVRVKKIGVDQ 70
          SGL+  ++ +  IS+NIAN+ T G       Y+R    F+ ++ GS  G      +G D+
Sbjct: 25 SGLSANASSLAAISDNIANSSTRG-------YKRIQTDFQSMVVGSKGGSYTAGGVGFDK 77

Query: 71 STFVEEFDP 79
             V+E  P
Sbjct: 78 LRLVDERGP 86


>gi|310764858|gb|ADP09808.1| Flagellar basal-body rod protein, FlgG [Erwinia sp. Ejp617]
          Length = 260

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  +TG       ++R+   F+++++
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTG-------FKRQRAVFQDLLY 46


>gi|159045919|ref|YP_001534713.1| flagellar hook protein FlgE [Dinoroseobacter shibae DFL 12]
 gi|157913679|gb|ABV95112.1| flagellar hook protein FlgE [Dinoroseobacter shibae DFL 12]
          Length = 434

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 17/98 (17%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------HGSGGVRVK 64
           SGL   + R+  IS+NIAN+ T G       Y+R    F+ ++        + +GGVRV 
Sbjct: 12  SGLNANATRLATISDNIANSSTYG-------YKRAEADFQSLVINGNSSGTYSAGGVRVT 64

Query: 65  KIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
              V  +Q   V   +P       SG++    ++ L E
Sbjct: 65  TTRVIDEQGPLVTTSNPTDLAVGGSGMLPVTTLSALDE 102


>gi|121607559|ref|YP_995366.1| flagellar basal-body rod protein FlgG [Verminephrobacter eiseniae
          EF01-2]
 gi|121552199|gb|ABM56348.1| flagellar basal-body rod protein FlgG [Verminephrobacter eiseniae
          EF01-2]
          Length = 260

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I +  IA +G++ Q  ++ +I+ N+AN  TTG       Y+R    FE++++
Sbjct: 1  MIDALWIAKTGMSAQQTQLDVIAHNLANVSTTG-------YKRSNAMFEDLIY 46


>gi|270262399|ref|ZP_06190670.1| flagellar basal-body rod protein FlgG [Serratia odorifera 4Rx13]
 gi|270043083|gb|EFA16176.1| flagellar basal-body rod protein FlgG [Serratia odorifera 4Rx13]
          Length = 260

 Score = 35.0 bits (79), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|330721006|gb|EGG99167.1| Flagellar basal-body rod protein FlgG [gamma proteobacterium
          IMCC2047]
          Length = 261

 Score = 34.7 bits (78), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++AS  I+ +GL+ Q   +  IS N+AN  TTG       Y+R+   F+++++
Sbjct: 1  MLASLWISKTGLSAQDQALASISNNLANVSTTG-------YKRERAVFQDLLY 46


>gi|220932517|ref|YP_002509425.1| flagellar hook protein FlgE, epsilon proteobacterial
          [Halothermothrix orenii H 168]
 gi|219993827|gb|ACL70430.1| flagellar hook protein FlgE, epsilon proteobacterial
          [Halothermothrix orenii H 168]
          Length = 519

 Score = 34.7 bits (78), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 18/76 (23%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
          ++ S +   SGL     RM +I  NIAN  T G       Y+  +++F+E++        
Sbjct: 1  MMRSMYAGVSGLKAHQTRMDVIGNNIANVNTVG-------YKSSSVTFKEMLSQTLRGAK 53

Query: 57 ----GSGGVRVKKIGV 68
              G GGV   ++G+
Sbjct: 54 APQGGRGGVNPMQVGL 69


>gi|157371205|ref|YP_001479194.1| flagellar basal body rod protein FlgG [Serratia proteamaculans
          568]
 gi|157322969|gb|ABV42066.1| flagellar basal-body rod protein FlgG [Serratia proteamaculans
          568]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|293395585|ref|ZP_06639868.1| flagellar basal-body rod protein FlgG [Serratia odorifera DSM
          4582]
 gi|291421904|gb|EFE95150.1| flagellar basal-body rod protein FlgG [Serratia odorifera DSM
          4582]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|292489131|ref|YP_003532018.1| flagellar basal-body rod protein FlgG [Erwinia amylovora
          CFBP1430]
 gi|292900250|ref|YP_003539619.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291200098|emb|CBJ47224.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291554565|emb|CBA22177.1| Flagellar basal-body rod protein flgG [Erwinia amylovora
          CFBP1430]
 gi|312173289|emb|CBX81544.1| Flagellar basal-body rod protein flgG [Erwinia amylovora ATCC
          BAA-2158]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  +TG       ++R+   F+++++
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTG-------FKRQRAVFQDLLY 46


>gi|197122909|ref|YP_002134860.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter sp. K]
 gi|220917701|ref|YP_002493005.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter
          dehalogenans 2CP-1]
 gi|196172758|gb|ACG73731.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter sp. K]
 gi|219955555|gb|ACL65939.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter
          dehalogenans 2CP-1]
          Length = 266

 Score = 34.7 bits (78), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 11/59 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMHGS 58
          ++ S + A +G+  Q  RM +I+ N+AN  TTG       ++R+   FE    E +HG+
Sbjct: 6  VLRSLYTAATGMEAQQLRMDVIANNLANTGTTG-------FKRQRAEFEDLLSETIHGA 57


>gi|70729006|ref|YP_258740.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens
          Pf-5]
 gi|68343305|gb|AAY90911.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens
          Pf-5]
          Length = 261

 Score = 34.7 bits (78), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 12/87 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F+++++     ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFQDLLY-----QI 48

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          K+    QST   E   G  V     IV
Sbjct: 49 KRQPGAQSTQDSELPTGLQVGTGVRIV 75


>gi|95929195|ref|ZP_01311939.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
 gi|95134693|gb|EAT16348.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
          Length = 111

 Score = 34.7 bits (78), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 29/132 (21%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I +   A SGL  Q+ R+   + N+AN++T G  P      + T++  E     GGVR 
Sbjct: 1   MIDAMSSAMSGLQAQTLRLNSTANNVANSQTEGYAP-----SQVTLAENE----QGGVRA 51

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTI 118
           +                 PV N +G  +        V++  E  DM +T + Y ANL+T+
Sbjct: 52  Q--------------LQKPV-NGTGDAQTAENQTSKVDLAKEMVDMMQTKQFYSANLKTV 96

Query: 119 KQSHDMMTTTLD 130
             +  M    LD
Sbjct: 97  SVADSMSGDLLD 108


>gi|325982369|ref|YP_004294771.1| flagellar basal-body rod protein FlgG [Nitrosomonas sp. AL212]
 gi|325531888|gb|ADZ26609.1| flagellar basal-body rod protein FlgG [Nitrosomonas sp. AL212]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +GL  Q  ++ +I+ N+AN  T G       ++R    FE++M+
Sbjct: 1  MIRSLWISKTGLEAQQTKLDVIANNLANVNTNG-------FKRSRAVFEDLMY 46


>gi|302878273|ref|YP_003846837.1| flagellar basal-body rod protein FlgB [Gallionella
           capsiferriformans ES-2]
 gi|302581062|gb|ADL55073.1| flagellar basal-body rod protein FlgB [Gallionella
           capsiferriformans ES-2]
          Length = 134

 Score = 34.7 bits (78), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 17/131 (12%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKK 65
           S H   + L+++ AR ++++ NIANA    DTPG   Y+ + I+F   +  +  G  VK 
Sbjct: 8   SLHFNQTALSLRGARQELLASNIANA----DTPG---YKARDINFASALQNALAGTSVKL 60

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPN--------VNVLVETADMRETNRLYMANLQ- 116
                S    E + G  +  A    + P+        VN+ VE A   +    Y A+++ 
Sbjct: 61  PMATSSAMHLEGNAGGQIMGAPVQYRRPDQPSADGNTVNMDVERAQFADNALRYEASVKF 120

Query: 117 TIKQSHDMMTT 127
           T  +  DM+  
Sbjct: 121 TGDKLKDMLAA 131


>gi|329898292|ref|ZP_08272375.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
          IMCC3088]
 gi|328920857|gb|EGG28300.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
          IMCC3088]
          Length = 124

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 7/46 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L ++S R+Q++++NIANA    DTPG   ++ + + F++V+    G
Sbjct: 12 LVLKSQRLQVLAKNIANA----DTPG---FKARDVDFKQVLAAQAG 50


>gi|327393471|dbj|BAK10893.1| flagellar hook protein FlgE [Pantoea ananatis AJ13355]
          Length = 415

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 11/77 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          SGL   S+ + +I  NIAN+ T G       ++  TI+F ++  GS       +G   + 
Sbjct: 8  SGLGAASSNLDVIGNNIANSATAG-------FKSSTIAFADMFAGSN----VGLGTKVAA 56

Query: 73 FVEEFDPGHPVANASGI 89
           ++ F+ G     + G+
Sbjct: 57 VIQNFNDGSTTTTSRGL 73


>gi|291538503|emb|CBL11614.1| fagellar hook-basal body proteins [Roseburia intestinalis XB6B4]
          Length = 547

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 20/77 (25%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------------ 56
          + A SGL     +M +I  NIAN  T         ++  ++ F++V++            
Sbjct: 2  YSAVSGLKTHQTKMDVIGNNIANVNTV-------AFKSSSVVFQDVLYQMTSNASGANAA 54

Query: 57 -GSGGVRVKKIGVDQST 72
           G+GGV  K+IG+  +T
Sbjct: 55 TGTGGVNAKQIGLGVTT 71


>gi|114762177|ref|ZP_01441645.1| flagellar hook protein FlgE, putative [Pelagibaca bermudensis
          HTCC2601]
 gi|114545201|gb|EAU48204.1| flagellar hook protein FlgE, putative [Roseovarius sp. HTCC2601]
          Length = 432

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
          SGLA  ++R+  IS+NIAN+ T G       YRR    F  ++  SG  R    G
Sbjct: 12 SGLAGNASRLSAISDNIANSSTYG-------YRRVETDFTALVMSSGSQRAYTAG 59


>gi|304397206|ref|ZP_07379085.1| flagellar basal-body rod protein FlgG [Pantoea sp. aB]
 gi|308186395|ref|YP_003930526.1| Flagellar basal-body rod protein flgG [Pantoea vagans C9-1]
 gi|304355355|gb|EFM19723.1| flagellar basal-body rod protein FlgG [Pantoea sp. aB]
 gi|308056905|gb|ADO09077.1| Flagellar basal-body rod protein flgG [Pantoea vagans C9-1]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R    FE++M+
Sbjct: 1  MIRSLWIAKTGLDAQQMNMDVIANNLANVSTNG-------FKRSRAVFEDLMY 46


>gi|317047691|ref|YP_004115339.1| flagellar hook-basal body protein [Pantoea sp. At-9b]
 gi|316949308|gb|ADU68783.1| flagellar hook-basal body protein [Pantoea sp. At-9b]
          Length = 406

 Score = 34.7 bits (78), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 17/80 (21%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIGVD 69
          SGL+  S+ + +I  NIAN+ T G       ++  TI+F ++  GS    G +V  +   
Sbjct: 8  SGLSAASSNLDVIGNNIANSATAG-------FKSSTIAFADLFAGSDVGLGTKVAAV--- 57

Query: 70 QSTFVEEFDPGHPVANASGI 89
              ++ F+ G     + G+
Sbjct: 58 ----IQNFNDGTTTTTSRGL 73


>gi|332298513|ref|YP_004440435.1| flagellar basal-body rod protein FlgF [Treponema brennaborense DSM
           12168]
 gi|332181616|gb|AEE17304.1| flagellar basal-body rod protein FlgF [Treponema brennaborense DSM
           12168]
          Length = 265

 Score = 34.7 bits (78), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           G  +  NVNV+ E   M E NR Y AN +TI Q+ D M +TL
Sbjct: 217 GYTETSNVNVVNEMVSMIEVNRAYEANQKTI-QTEDTMMSTL 257


>gi|261856358|ref|YP_003263641.1| flagellar basal-body rod protein FlgG [Halothiobacillus
          neapolitanus c2]
 gi|261836827|gb|ACX96594.1| flagellar basal-body rod protein FlgG [Halothiobacillus
          neapolitanus c2]
          Length = 262

 Score = 34.7 bits (78), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           IA +GL  Q  RM +IS N+AN  TTG       +++    FE++++
Sbjct: 7  WIAKTGLDAQQTRMSVISNNLANVNTTG-------FKQDRAVFEDLIY 47


>gi|332531620|ref|ZP_08407517.1| flagellar basal-body rod FlgG [Hylemonella gracilis ATCC 19624]
 gi|332038983|gb|EGI75412.1| flagellar basal-body rod FlgG [Hylemonella gracilis ATCC 19624]
          Length = 259

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +  S  IA +G+  Q  ++  IS N+AN+ T G       ++R ++ FE++M+
Sbjct: 1  MFNSLWIAKTGMEAQQRQLDTISNNLANSSTNG-------FKRSSVVFEDLMY 46


>gi|153953775|ref|YP_001394540.1| flagellar basal body rod protein FlgB [Clostridium kluyveri DSM
          555]
 gi|219854391|ref|YP_002471513.1| hypothetical protein CKR_1048 [Clostridium kluyveri NBRC 12016]
 gi|146346656|gb|EDK33192.1| FlgB [Clostridium kluyveri DSM 555]
 gi|219568115|dbj|BAH06099.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 133

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          GL   S R + IS+N+AN  T G       Y+RK ++FEE +  S
Sbjct: 19 GLDAASERSKAISDNLANVNTAG-------YKRKYVTFEESLKDS 56


>gi|308186393|ref|YP_003930524.1| Flagellar hook protein FlgE [Pantoea vagans C9-1]
 gi|308056903|gb|ADO09075.1| Flagellar hook protein FlgE [Pantoea vagans C9-1]
          Length = 418

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 11/77 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          SGL   S+ + +I  NIAN+ T G       ++  TI+F ++  GS       +G   + 
Sbjct: 8  SGLGAASSNLDVIGNNIANSATAG-------FKSSTIAFADMFAGSN----VGLGTKVAA 56

Query: 73 FVEEFDPGHPVANASGI 89
           ++ F+ G     + G+
Sbjct: 57 VIQNFNDGATTTTSRGL 73


>gi|291617022|ref|YP_003519764.1| FlgG [Pantoea ananatis LMG 20103]
 gi|291152052|gb|ADD76636.1| FlgG [Pantoea ananatis LMG 20103]
 gi|327393473|dbj|BAK10895.1| flagellar basal-body rod protein FlgG [Pantoea ananatis AJ13355]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R    FE++M+
Sbjct: 1  MIRSLWIAKTGLDAQQMNMDVIANNLANVSTNG-------FKRSRAVFEDLMY 46


>gi|291617020|ref|YP_003519762.1| FlgE [Pantoea ananatis LMG 20103]
 gi|291152050|gb|ADD76634.1| FlgE [Pantoea ananatis LMG 20103]
          Length = 415

 Score = 34.7 bits (78), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 11/77 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          SGL   S+ + +I  NIAN+ T G       ++  TI+F ++  GS       +G   + 
Sbjct: 8  SGLGAASSNLDVIGNNIANSATAG-------FKSSTIAFADMFAGSN----VGLGTKVAA 56

Query: 73 FVEEFDPGHPVANASGI 89
           ++ F+ G     + G+
Sbjct: 57 VIQNFNDGSTTTTSRGL 73


>gi|238785495|ref|ZP_04629478.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
          43970]
 gi|238713597|gb|EEQ05626.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
          43970]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|307293785|ref|ZP_07573629.1| flagellar basal-body rod protein FlgG [Sphingobium chlorophenolicum
           L-1]
 gi|306879936|gb|EFN11153.1| flagellar basal-body rod protein FlgG [Sphingobium chlorophenolicum
           L-1]
          Length = 262

 Score = 34.7 bits (78), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 24/39 (61%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           SG ++  NVNV+ E  DM ET R Y  N + IK + +M+
Sbjct: 217 SGYLETSNVNVVEELVDMIETQRAYEVNSKMIKATDEML 255



 Score = 34.3 bits (77), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A+ H+A +GL  Q+ +M++I+ N+AN  TT        ++R    FE + +
Sbjct: 4  AALHVARTGLDAQNTKMRVIANNLANVNTT-------AFKRDRADFETLAY 47


>gi|291613040|ref|YP_003523197.1| flagellar basal-body rod protein FlgG [Sideroxydans
          lithotrophicus ES-1]
 gi|291583152|gb|ADE10810.1| flagellar basal-body rod protein FlgG [Sideroxydans
          lithotrophicus ES-1]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +GL  Q  +M +IS N+AN  T G       ++R    FE++++
Sbjct: 1  MIRSLWISKTGLEAQQTQMDVISNNLANVSTNG-------FKRSRAVFEDLLY 46


>gi|291288380|ref|YP_003505196.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
          12809]
 gi|290885540|gb|ADD69240.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
          12809]
          Length = 252

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 16/33 (48%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I   + A SG+A+Q  RM IIS N+AN  T G
Sbjct: 1  MINGLYTATSGMAMQQRRMDIISSNLANLNTVG 33


>gi|309779449|ref|ZP_07674210.1| flagellar basal-body rod protein FlgG [Ralstonia sp. 5_7_47FAA]
 gi|308921690|gb|EFP67326.1| flagellar basal-body rod protein FlgG [Ralstonia sp. 5_7_47FAA]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       ++R    FE++++
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTG-------FKRSRAVFEDLLY 46


>gi|187926952|ref|YP_001893297.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12J]
 gi|241665281|ref|YP_002983640.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
 gi|187728706|gb|ACD29870.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12J]
 gi|240867308|gb|ACS64968.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       ++R    FE++++
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTG-------FKRSRAVFEDLLY 46


>gi|89098647|ref|ZP_01171529.1| flagellar basal-body rod protein B [Bacillus sp. NRRL B-14911]
 gi|89086609|gb|EAR65728.1| flagellar basal-body rod protein B [Bacillus sp. NRRL B-14911]
          Length = 135

 Score = 34.7 bits (78), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 10/61 (16%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKKIGVDQSTFVE 75
          S + +++++NIANA    DTP    Y+ K +SF+ V+      GG+  K+  V   +F  
Sbjct: 22 SLKQKVVAQNIANA----DTPN---YKAKDVSFKSVLQSEMAIGGIEAKRTDVRHYSFAA 74

Query: 76 E 76
          E
Sbjct: 75 E 75


>gi|296103609|ref|YP_003613755.1| Flagellar basal-body rod protein, FlgG [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
 gi|295058068|gb|ADF62806.1| Flagellar basal-body rod protein, FlgG [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   F+++++
Sbjct: 1  MIRSLWIAKTGLEAQQLNMDVISNNLANVNTNG-------FKRQRAVFQDLLY 46


>gi|238755322|ref|ZP_04616665.1| Flagellar basal-body rod protein flgG [Yersinia ruckeri ATCC
          29473]
 gi|238706458|gb|EEP98832.1| Flagellar basal-body rod protein flgG [Yersinia ruckeri ATCC
          29473]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|260768780|ref|ZP_05877714.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP
          102972]
 gi|260616810|gb|EEX41995.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP
          102972]
 gi|315180483|gb|ADT87397.1| hypothetical flagellar basal-body rod protein [Vibrio furnissii
          NCTC 11218]
          Length = 261

 Score = 34.7 bits (78), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 7/47 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          I+ +G+A Q A+M  IS N+AN  T G       ++R  + FE++ +
Sbjct: 7  ISKTGMAAQDAKMTAISNNLANVNTVG-------FKRDRVVFEDLFY 46


>gi|332161324|ref|YP_004297901.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
          subsp. palearctica 105.5R(r)]
 gi|318605244|emb|CBY26742.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
          subsp. palearctica Y11]
 gi|325665554|gb|ADZ42198.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
          subsp. palearctica 105.5R(r)]
 gi|330860604|emb|CBX70901.1| flagellar basal-body rod protein flgG [Yersinia enterocolitica
          W22703]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|238751764|ref|ZP_04613252.1| Flagellar basal-body rod protein flgG [Yersinia rohdei ATCC
          43380]
 gi|238710035|gb|EEQ02265.1| Flagellar basal-body rod protein flgG [Yersinia rohdei ATCC
          43380]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|121596119|ref|YP_988015.1| flagellar basal-body rod protein FlgG [Acidovorax sp. JS42]
 gi|222112274|ref|YP_002554538.1| flagellar basal-body rod protein flgg [Acidovorax ebreus TPSY]
 gi|120608199|gb|ABM43939.1| flagellar basal-body rod protein FlgG [Acidovorax sp. JS42]
 gi|221731718|gb|ACM34538.1| flagellar basal-body rod protein FlgG [Acidovorax ebreus TPSY]
          Length = 260

 Score = 34.7 bits (78), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++ S  IA +G+  Q  ++ +IS N+AN  TTG       ++R    FE++++
Sbjct: 1  MMNSLWIAKTGMTAQQTQLDVISHNLANVSTTG-------FKRNNAVFEDLIY 46


>gi|303327773|ref|ZP_07358213.1| putative flagellar basal-body rod protein [Desulfovibrio sp.
           3_1_syn3]
 gi|302862134|gb|EFL85068.1| putative flagellar basal-body rod protein [Desulfovibrio sp.
           3_1_syn3]
          Length = 133

 Score = 34.7 bits (78), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 51/141 (36%), Gaps = 20/141 (14%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +  S ++  S +   S  M + + N+AN  T G  P    Y            G GG
Sbjct: 1   MSGITGSMNLGASAMNAHSWGMAVTAHNVANVNTAGFAPQHAVYAT----------GPGG 50

Query: 61  VRVKKIGVDQSTFVEEFDPGH----------PVANASGIVKYPNVNVLVETADMRETNRL 110
             V+   V Q + V    P            P +  S  V     ++  E   M  T R 
Sbjct: 51  RGVRLDAVLQDSGVAGRLPAEVRNNPAVSTAPASMESDFVNPGGTDLGREMTQMISTQRT 110

Query: 111 YMANLQTIKQSHDMMTTTLDL 131
           Y AN Q ++    M+ T LDL
Sbjct: 111 YEANAQVVRTGDAMLGTLLDL 131


>gi|187478187|ref|YP_786211.1| flagellar basal body rod protein FlgG [Bordetella avium 197N]
 gi|115422773|emb|CAJ49301.1| flagellar basal-body rod protein [Bordetella avium 197N]
          Length = 261

 Score = 34.7 bits (78), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++ S  IA +GL  Q   M +IS N+AN +T G       ++R+   F+++M+
Sbjct: 1  MMRSLWIAKTGLESQQTSMDVISHNLANVQTNG-------FKRERAVFQDLMY 46


>gi|238799109|ref|ZP_04642565.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
          43969]
 gi|238717056|gb|EEQ08916.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
          43969]
          Length = 260

 Score = 34.7 bits (78), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|304397204|ref|ZP_07379083.1| fagellar hook-basal body protein [Pantoea sp. aB]
 gi|304355353|gb|EFM19721.1| fagellar hook-basal body protein [Pantoea sp. aB]
          Length = 418

 Score = 34.7 bits (78), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 11/77 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          SGL   S+ + +I  NIAN+ T G       ++  TI+F ++  GS       +G   + 
Sbjct: 8  SGLGAASSNLDVIGNNIANSATAG-------FKSSTIAFADMFAGSN----VGLGTKVAA 56

Query: 73 FVEEFDPGHPVANASGI 89
           ++ F+ G     + G+
Sbjct: 57 VIQNFNDGATTTTSRGL 73


>gi|190890382|ref|YP_001976924.1| flagellar hook protein [Rhizobium etli CIAT 652]
 gi|190695661|gb|ACE89746.1| flagellar hook protein [Rhizobium etli CIAT 652]
          Length = 433

 Score = 34.7 bits (78), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A SG+  Q+ R+  +S+NIAN  TTG       Y+  + SF  ++  S G   
Sbjct: 3  IFGSMKTAVSGMNAQANRLSTVSDNIANVNTTG-------YKAVSTSFSSLVLPSSGGNY 55

Query: 64 KKIGVDQS 71
             GV  S
Sbjct: 56 NSGGVQTS 63


>gi|238788317|ref|ZP_04632111.1| Flagellar basal-body rod protein flgG [Yersinia frederiksenii
          ATCC 33641]
 gi|238723563|gb|EEQ15209.1| Flagellar basal-body rod protein flgG [Yersinia frederiksenii
          ATCC 33641]
          Length = 260

 Score = 34.7 bits (78), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|259908810|ref|YP_002649166.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
 gi|224964432|emb|CAX55941.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
 gi|283478792|emb|CAY74708.1| Flagellar basal-body rod protein flgG [Erwinia pyrifoliae DSM
          12163]
 gi|310767292|gb|ADP12242.1| Flagellar basal-body rod protein [Erwinia sp. Ejp617]
          Length = 260

 Score = 34.3 bits (77), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++M+
Sbjct: 1  MIRSLWIAKTGLDGQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLMY 46


>gi|153953797|ref|YP_001394562.1| flagellar basal body rod protein FlgG [Clostridium kluyveri DSM
          555]
 gi|219854413|ref|YP_002471535.1| hypothetical protein CKR_1070 [Clostridium kluyveri NBRC 12016]
 gi|146346678|gb|EDK33214.1| FlgG1 [Clostridium kluyveri DSM 555]
 gi|219568137|dbj|BAH06121.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 255

 Score = 34.3 bits (77), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 4/58 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG---DTPGSDPYRRKTI-SFEEVMHG 57
          +I S + A SG+ VQ A+  +I+ N+AN  T G   D   S P+    I ++++V++G
Sbjct: 1  MIRSFYTAVSGMIVQEAKQDVITNNLANVNTVGFKQDDLKSTPFNEVLIQNYDKVVNG 58


>gi|299068734|emb|CBJ39973.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum
          CMR15]
          Length = 260

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       ++R    FE++++
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTG-------FKRSRAVFEDLLY 46


>gi|238764394|ref|ZP_04625344.1| Flagellar basal-body rod protein flgG [Yersinia kristensenii ATCC
          33638]
 gi|238697420|gb|EEP90187.1| Flagellar basal-body rod protein flgG [Yersinia kristensenii ATCC
          33638]
          Length = 260

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|86356330|ref|YP_468222.1| flagellar hook protein FlgE [Rhizobium etli CFN 42]
 gi|86280432|gb|ABC89495.1| flagellar hook protein [Rhizobium etli CFN 42]
          Length = 434

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A SG+  Q+ R+  +S+NIAN  TTG       Y+  + SF  ++  S G   
Sbjct: 3  IFGSMKTAVSGMNAQANRLSTVSDNIANVNTTG-------YKAVSTSFSSLVLPSSGGNY 55

Query: 64 KKIGVDQS 71
             GV  S
Sbjct: 56 NSGGVQTS 63


>gi|238794000|ref|ZP_04637618.1| Flagellar basal-body rod protein flgG [Yersinia intermedia ATCC
          29909]
 gi|238726632|gb|EEQ18168.1| Flagellar basal-body rod protein flgG [Yersinia intermedia ATCC
          29909]
          Length = 260

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|238785497|ref|ZP_04629480.1| Flagellar hook protein FlgE [Yersinia bercovieri ATCC 43970]
 gi|238713599|gb|EEQ05628.1| Flagellar hook protein FlgE [Yersinia bercovieri ATCC 43970]
          Length = 419

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 8/59 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQ 70
          SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS  G+ VK  G+ Q
Sbjct: 8  SGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGITQ 59


>gi|301631988|ref|XP_002945073.1| PREDICTED: flagellar basal-body rod protein flgF-like [Xenopus
           (Silurana) tropicalis]
          Length = 430

 Score = 34.3 bits (77), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 11/67 (16%)

Query: 73  FVEEFDPGHPV----------ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           +VE F+ G P           A  SG ++  NV++  E  +M    R Y +N QTIK + 
Sbjct: 133 WVETFESGQPTVGQPTSGSFGALRSGALEDSNVDLTAELVNMMTAQRAYQSNAQTIK-TQ 191

Query: 123 DMMTTTL 129
           D + +TL
Sbjct: 192 DQVISTL 198


>gi|253996317|ref|YP_003048381.1| flagellar basal-body rod protein FlgG [Methylotenera mobilis
          JLW8]
 gi|253982996|gb|ACT47854.1| flagellar basal-body rod protein FlgG [Methylotenera mobilis
          JLW8]
          Length = 260

 Score = 34.3 bits (77), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +GL  Q  +M +IS N+AN  T G       ++R    FE++++
Sbjct: 1  MIRSLWISKTGLDAQQTQMDVISNNLANVSTNG-------FKRSRAVFEDLLY 46


>gi|290474974|ref|YP_003467858.1| flagellar basal body rod cell-distal protein [Xenorhabdus
          bovienii SS-2004]
 gi|289174291|emb|CBJ81081.1| flagellar biosynthesis; cell-distal portion of basal-body rod
          [Xenorhabdus bovienii SS-2004]
          Length = 260

 Score = 34.3 bits (77), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|284007173|emb|CBA72457.1| flagellar basal-body rod protein FlgG [Arsenophonus nasoniae]
          Length = 260

 Score = 34.3 bits (77), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R    F+++M+
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNG-------FKRGRAVFQDLMY 46


>gi|83747652|ref|ZP_00944688.1| FlgG [Ralstonia solanacearum UW551]
 gi|207728348|ref|YP_002256742.1| flagellar basal-body rod protein flgg (distal rod protein)
          [Ralstonia solanacearum MolK2]
 gi|207739735|ref|YP_002258128.1| flagellar basal-body rod protein flgg (distal rod protein)
          [Ralstonia solanacearum IPO1609]
 gi|300696915|ref|YP_003747576.1| FlgG: flagellar basal-body rod protein [Ralstonia solanacearum
          CFBP2957]
 gi|83725704|gb|EAP72846.1| FlgG [Ralstonia solanacearum UW551]
 gi|206591594|emb|CAQ57206.1| flagellar basal-body rod protein flgg (distal rod protein)
          [Ralstonia solanacearum MolK2]
 gi|206593117|emb|CAQ60023.1| flagellar basal-body rod protein flgg (distal rod protein)
          [Ralstonia solanacearum IPO1609]
 gi|299073639|emb|CBJ53159.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum
          CFBP2957]
          Length = 260

 Score = 34.3 bits (77), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       ++R    FE++++
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTG-------FKRSRAVFEDLLY 46


>gi|304404241|ref|ZP_07385903.1| flagellar basal-body rod protein FlgB [Paenibacillus
          curdlanolyticus YK9]
 gi|304347219|gb|EFM13051.1| flagellar basal-body rod protein FlgB [Paenibacillus
          curdlanolyticus YK9]
          Length = 136

 Score = 34.3 bits (77), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 9/54 (16%)

Query: 16 AVQSA--RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
          A+QSA  R ++IS+NIAN     DTP    ++R  + FE+++  + G   KKI 
Sbjct: 15 AIQSAETRQKVISDNIANV----DTPN---FKRSEVLFEDLLADAMGTNEKKIA 61


>gi|156934440|ref|YP_001438356.1| flagellar hook protein FlgE [Cronobacter sakazakii ATCC BAA-894]
 gi|156532694|gb|ABU77520.1| hypothetical protein ESA_02271 [Cronobacter sakazakii ATCC
          BAA-894]
          Length = 409

 Score = 34.3 bits (77), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 8/59 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQ 70
          SGL   S  + +I  NIAN+ T G       ++  ++SF ++  GS  G+ VK  G+ Q
Sbjct: 8  SGLNAASTNLDVIGNNIANSATYG-------FKSGSVSFADMFAGSKAGLGVKVAGITQ 59


>gi|17548568|ref|NP_521908.1| flagellar basal-body rod protein FlgG [Ralstonia solanacearum
          GMI1000]
 gi|17430816|emb|CAD17498.1| probable flagellar basal-body rod protein flgg (distal rod
          protein) [Ralstonia solanacearum GMI1000]
          Length = 260

 Score = 34.3 bits (77), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       ++R    FE++++
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTG-------FKRSRAVFEDLLY 46


>gi|327192294|gb|EGE59259.1| flagellar hook protein FlgE [Rhizobium etli CNPAF512]
          Length = 483

 Score = 34.3 bits (77), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 14/68 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           +  S   A SG++ Q+ R+  +S+NIANA T G       Y+  + SF  ++       +
Sbjct: 56  IFGSMKTAVSGMSAQANRLSTVSDNIANANTVG-------YKAVSTSFSSLVLPSSSGNY 108

Query: 57  GSGGVRVK 64
            SGGV+  
Sbjct: 109 NSGGVQTS 116


>gi|260597445|ref|YP_003210016.1| flagellar hook protein FlgE [Cronobacter turicensis z3032]
 gi|260216622|emb|CBA29917.1| Flagellar hook protein flgE [Cronobacter turicensis z3032]
          Length = 410

 Score = 34.3 bits (77), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 8/59 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQ 70
          SGL   S  + +I  NIAN+ T G       ++  ++SF ++  GS  G+ VK  G+ Q
Sbjct: 8  SGLNAASTNLDVIGNNIANSATYG-------FKSGSVSFADMFAGSKAGLGVKVAGITQ 59


>gi|300693340|ref|YP_003749313.1| flgg: flagellar basal-body rod protein [Ralstonia solanacearum
          PSI07]
 gi|299075377|emb|CBJ34672.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum
          PSI07]
          Length = 260

 Score = 34.3 bits (77), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       ++R    FE++++
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTG-------FKRSRAVFEDLLY 46


>gi|186895116|ref|YP_001872228.1| flagellar basal body rod protein FlgG [Yersinia
          pseudotuberculosis PB1/+]
 gi|186698142|gb|ACC88771.1| flagellar basal-body rod protein FlgG [Yersinia
          pseudotuberculosis PB1/+]
          Length = 260

 Score = 34.3 bits (77), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|51596013|ref|YP_070204.1| flagellar basal body rod protein FlgG [Yersinia
          pseudotuberculosis IP 32953]
 gi|153947499|ref|YP_001401288.1| flagellar basal body rod protein FlgG [Yersinia
          pseudotuberculosis IP 31758]
 gi|170024645|ref|YP_001721150.1| flagellar basal body rod protein FlgG [Yersinia
          pseudotuberculosis YPIII]
 gi|51589295|emb|CAH20916.1| flagellar basal-body rod protein FlgG (distal rod protein)
          [Yersinia pseudotuberculosis IP 32953]
 gi|152958994|gb|ABS46455.1| flagellar basal-body rod protein FlgG [Yersinia
          pseudotuberculosis IP 31758]
 gi|169751179|gb|ACA68697.1| flagellar basal-body rod protein FlgG [Yersinia
          pseudotuberculosis YPIII]
          Length = 260

 Score = 34.3 bits (77), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|238751762|ref|ZP_04613250.1| Flagellar hook protein FlgE [Yersinia rohdei ATCC 43380]
 gi|238710033|gb|EEQ02263.1| Flagellar hook protein FlgE [Yersinia rohdei ATCC 43380]
          Length = 430

 Score = 34.3 bits (77), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 8/59 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQ 70
          SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS  G+ V+  G+ Q
Sbjct: 8  SGLNAASSNLDVIGNNIANSATSG-------FKSSSVSFADMFAGSQAGMGVQVAGITQ 59


>gi|327193059|gb|EGE59971.1| flagellar hook protein [Rhizobium etli CNPAF512]
          Length = 434

 Score = 34.3 bits (77), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A SG+  Q+ R+  +S+NIAN  TTG       Y+  + SF  ++  S G   
Sbjct: 3  IFGSMKTAVSGMNAQANRLSTVSDNIANVNTTG-------YKAVSTSFSSLVLPSSGGNY 55

Query: 64 KKIGVDQS 71
             GV  S
Sbjct: 56 NSGGVQTS 63


>gi|261344140|ref|ZP_05971784.1| flagellar basal-body rod protein FlgG [Providencia rustigianii
          DSM 4541]
 gi|282567732|gb|EFB73267.1| flagellar basal-body rod protein FlgG [Providencia rustigianii
          DSM 4541]
          Length = 260

 Score = 34.3 bits (77), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   + +IS N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|238799107|ref|ZP_04642563.1| Flagellar hook protein FlgE [Yersinia mollaretii ATCC 43969]
 gi|238717054|gb|EEQ08914.1| Flagellar hook protein FlgE [Yersinia mollaretii ATCC 43969]
          Length = 420

 Score = 34.3 bits (77), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 8/59 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQ 70
          SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS  G+ VK  G+ Q
Sbjct: 8  SGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGITQ 59


>gi|296535149|ref|ZP_06897378.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
 gi|296264524|gb|EFH10920.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
          Length = 436

 Score = 34.3 bits (77), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          L  S + A SGL  Q+A +  +S N+AN++TTG       Y+R   +F E + 
Sbjct: 5  LNGSLYAATSGLGAQTAAITNVSNNVANSQTTG-------YKRVDTAFAEQLS 50


>gi|253990127|ref|YP_003041483.1| flagellar hook protein FlgE [Photorhabdus asymbiotica subsp.
          asymbiotica ATCC 43949]
 gi|253781577|emb|CAQ84740.1| flagellar hook protein flge [Photorhabdus asymbiotica]
          Length = 404

 Score = 34.3 bits (77), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 13/71 (18%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVRVKKIGVDQS 71
          SGL   +A + +I  NIANA T G       ++  + +F ++  GS  G+ VK  G++Q+
Sbjct: 8  SGLNAAAANLDVIGNNIANAATYG-------FKSSSAAFADIFAGSQVGLGVKMSGINQN 60

Query: 72 TFVEEFDPGHP 82
               F  G P
Sbjct: 61 -----FKDGTP 66


>gi|325274797|ref|ZP_08140825.1| flagellar basal body rod protein FlgG [Pseudomonas sp. TJI-51]
 gi|324100065|gb|EGB97883.1| flagellar basal body rod protein FlgG [Pseudomonas sp. TJI-51]
          Length = 261

 Score = 34.3 bits (77), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 12/87 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F ++++     +V
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFADLLY-----QV 48

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          K+    QST   E   G  V     IV
Sbjct: 49 KRQPGAQSTQDSELPSGLQVGTGVRIV 75


>gi|123442784|ref|YP_001006761.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
          enterocolitica 8081]
 gi|332161322|ref|YP_004297899.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
          palearctica 105.5R(r)]
 gi|122089745|emb|CAL12598.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
          enterocolitica 8081]
 gi|318605242|emb|CBY26740.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
          palearctica Y11]
 gi|325665552|gb|ADZ42196.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
          palearctica 105.5R(r)]
 gi|330860606|emb|CBX70903.1| flagellar hook protein flgE [Yersinia enterocolitica W22703]
          Length = 419

 Score = 34.3 bits (77), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 8/59 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQ 70
          SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS  G+ VK  G+ Q
Sbjct: 8  SGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGITQ 59


>gi|298507071|gb|ADI85794.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
          KN400]
          Length = 477

 Score = 34.3 bits (77), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 29/57 (50%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          IA SG+  Q   +++ SENI N  T G +  +  +   T+S E       GVRV +I
Sbjct: 9  IAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFPLGNGVRVAEI 65


>gi|295687864|ref|YP_003591557.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
 gi|295429767|gb|ADG08939.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
          Length = 425

 Score = 34.3 bits (77), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L A+   A SGL  QS  +  ISENIAN+ TT        Y+   + F+ ++ G  G
Sbjct: 3  LSAALSTAVSGLTAQSRALSAISENIANSSTT-------AYKTTDVYFQALVSGGKG 52


>gi|104782840|ref|YP_609338.1| flagellar basal body rod protein FlgG [Pseudomonas entomophila
          L48]
 gi|95111827|emb|CAK16551.1| Flagellar basal-body rod protein flgG [Pseudomonas entomophila
          L48]
          Length = 261

 Score = 34.3 bits (77), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 12/87 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F+++++     ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFQDLLY-----QI 48

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          K+    QST   E   G  V     +V
Sbjct: 49 KRQPGAQSTQDSELPSGLQVGTGVRVV 75


>gi|254292905|ref|YP_003058928.1| flagellar basal body rod protein FlgG [Hirschia baltica ATCC
          49814]
 gi|254041436|gb|ACT58231.1| flagellar basal-body rod protein FlgG [Hirschia baltica ATCC
          49814]
          Length = 261

 Score = 34.3 bits (77), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 11/61 (18%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          A +G+  Q   +++IS NIAN  TTG       Y+R+   F+++++      ++K+GV  
Sbjct: 7  AATGMQAQQLNVEVISNNIANMNTTG-------YKRQRAEFQDLLY----TNMEKMGVSS 55

Query: 71 S 71
          S
Sbjct: 56 S 56


>gi|251772412|gb|EES52979.1| flagellar basal-body rod protein FlgG [Leptospirillum
          ferrodiazotrophum]
          Length = 261

 Score = 34.3 bits (77), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 7/46 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A SG+  Q A + +I+ N+AN  TTG       Y+R+  +F+++M+
Sbjct: 8  AASGMESQQANLDVITNNLANVNTTG-------YKRQRANFQDLMY 46


>gi|71906393|ref|YP_283980.1| flagellar basal body rod protein FlgG [Dechloromonas aromatica
          RCB]
 gi|71846014|gb|AAZ45510.1| Protein of unknown function DUF1078 [Dechloromonas aromatica RCB]
          Length = 260

 Score = 34.3 bits (77), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q  ++ +IS N+AN  T G       ++R    FE++++
Sbjct: 1  MIRSLWIARTGLDAQQTQLDVISNNLANVSTNG-------FKRSRAVFEDLLY 46


>gi|330808197|ref|YP_004352659.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376305|gb|AEA67655.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 261

 Score = 34.3 bits (77), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 28/122 (22%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ +  +A +GL+ Q   +  IS N+AN  TTG       ++R    F+++++     +V
Sbjct: 1   MLPALWVAKTGLSAQDTNLTTISNNLANVSTTG-------FKRDRAEFQDLLY-----QV 48

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA-NLQTIKQSH 122
           K+    QST   E   G  V     IV                T + + A +LQT +Q  
Sbjct: 49  KRQPGAQSTQDSELPSGLQVGTGVRIVG---------------TQKNFTAGSLQTTEQPL 93

Query: 123 DM 124
           DM
Sbjct: 94  DM 95


>gi|253990125|ref|YP_003041481.1| flagellar basal-body rod protein flgg [Photorhabdus asymbiotica
          subsp. asymbiotica ATCC 43949]
 gi|253781575|emb|CAQ84738.1| flagellar basal-body rod protein flgg (distal rod protein)
          [Photorhabdus asymbiotica]
          Length = 260

 Score = 34.3 bits (77), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|183598619|ref|ZP_02960112.1| hypothetical protein PROSTU_02019 [Providencia stuartii ATCC
          25827]
 gi|188020798|gb|EDU58838.1| hypothetical protein PROSTU_02019 [Providencia stuartii ATCC
          25827]
          Length = 260

 Score = 34.3 bits (77), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   + +IS N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDTQQTNLDVISNNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|39998134|ref|NP_954085.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
          PCA]
 gi|39985080|gb|AAR36435.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
          PCA]
          Length = 477

 Score = 34.3 bits (77), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 29/57 (50%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          IA SG+  Q   +++ SENI N  T G +  +  +   T+S E       GVRV +I
Sbjct: 9  IAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFPLGNGVRVAEI 65


>gi|332981428|ref|YP_004462869.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1
           BON]
 gi|332699106|gb|AEE96047.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1
           BON]
          Length = 137

 Score = 34.3 bits (77), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 15/118 (12%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------GGV-RVKKIGVDQST 72
           R Q+IS+N+AN     DTPG   ++   ++FE+V+ G+       G V  +K I +   +
Sbjct: 24  RNQVISDNVANV----DTPG---FKASKVAFEDVLKGALDDNALKGKVTNIKHIPIGALS 76

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             +         N S  +   NV++ +E AD+ +T   Y A +Q + +   M+ + ++
Sbjct: 77  AKDVQPQVLQSQNTSMRMDGNNVDIDLEMADLAKTTIAYNAVIQKMTKEFQMLRSAIN 134


>gi|86157777|ref|YP_464562.1| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans
          2CP-C]
 gi|85774288|gb|ABC81125.1| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans
          2CP-C]
          Length = 266

 Score = 34.3 bits (77), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++ S + A +G+  Q  RM +I+ N+AN  TTG       ++R+   FE+++ 
Sbjct: 6  VLRSLYTAATGMEAQQLRMDVIANNLANTGTTG-------FKRQRAEFEDLLS 51


>gi|24216188|ref|NP_713669.1| FlgC-like protein [Leptospira interrogans serovar Lai str. 56601]
 gi|24197440|gb|AAN50687.1| FlgC-related protein [Leptospira interrogans serovar Lai str.
           56601]
          Length = 276

 Score = 34.3 bits (77), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 19/107 (17%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           H     L +Q AR++    N+ N  T         Y+++TI  ++   GS  +       
Sbjct: 136 HKLEYFLTIQIARIEQCYTNLINVNTIS-------YKKRTIQLQD--DGSFLIS------ 180

Query: 69  DQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETADMRETNRLY 111
           + S     F+P HP A    +A G + YP++NV  E  +++    LY
Sbjct: 181 ENSNQRYLFEPTHPDAIRTGSAKGYITYPDINVAEELYNLKSNISLY 227


>gi|114330361|ref|YP_746583.1| flagellar hook protein FlgE [Nitrosomonas eutropha C91]
 gi|114307375|gb|ABI58618.1| flagellar basal body FlaE domain protein [Nitrosomonas eutropha
          C91]
          Length = 419

 Score = 34.3 bits (77), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 9/71 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGVRVKKIGVDQ 70
          SGL   SA++ +   NIANA T G       +++    F +V   S  GG     IG   
Sbjct: 8  SGLKAASAKLDVTGNNIANANTVG-------FKQSQAQFSDVFANSLGGGKNQIGIGTQV 60

Query: 71 STFVEEFDPGH 81
          +   +EF  G+
Sbjct: 61 AAIAQEFAQGN 71


>gi|212709494|ref|ZP_03317622.1| hypothetical protein PROVALCAL_00536 [Providencia alcalifaciens
          DSM 30120]
 gi|212687832|gb|EEB47360.1| hypothetical protein PROVALCAL_00536 [Providencia alcalifaciens
          DSM 30120]
          Length = 260

 Score = 34.3 bits (77), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   + +IS N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNG-------FKRQRAVFEDLLY 46


>gi|37525843|ref|NP_929187.1| flagellar basal-body rod protein FlgG (Distal rod protein)
          [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36785272|emb|CAE14213.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
          [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 260

 Score = 33.9 bits (76), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAIFEDLLY 46


>gi|121602345|ref|YP_989400.1| flagellar basal body rod protein FlgG [Bartonella bacilliformis
          KC583]
 gi|120614522|gb|ABM45123.1| flagellar basal-body rod protein FlgG [Bartonella bacilliformis
          KC583]
          Length = 264

 Score = 33.9 bits (76), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 7/50 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          S  IA +G+A Q   + +I+ N+AN  TTG       Y+R    F ++M+
Sbjct: 5  SLSIAATGMAAQQTNLDVIANNLANINTTG-------YKRARAEFADLMY 47


>gi|229591869|ref|YP_002873988.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens
          SBW25]
 gi|229363735|emb|CAY51140.1| flagellar basal-body rod protein [Pseudomonas fluorescens SBW25]
          Length = 261

 Score = 33.9 bits (76), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 12/87 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +  +A +GL+ Q   +  IS N+AN  TTG       ++R    F+++++     ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTTISNNLANVSTTG-------FKRDRAEFQDLLY-----QI 48

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          KK    QST   E   G  +     IV
Sbjct: 49 KKQPGAQSTQDSELPSGLQLGTGVQIV 75


>gi|26991074|ref|NP_746499.1| flagellar basal body rod protein FlgG [Pseudomonas putida KT2440]
 gi|24986108|gb|AAN69963.1|AE016634_12 flagellar basal-body rod protein FlgG [Pseudomonas putida KT2440]
          Length = 261

 Score = 33.9 bits (76), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 12/87 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F ++++     ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFADLLY-----QI 48

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          K+    QST   E   G  V     IV
Sbjct: 49 KRQPGAQSTQDSELPSGLQVGTGVRIV 75


>gi|307264876|ref|ZP_07546438.1| fagellar hook-basal body protein [Thermoanaerobacter wiegelii
          Rt8.B1]
 gi|306920134|gb|EFN50346.1| fagellar hook-basal body protein [Thermoanaerobacter wiegelii
          Rt8.B1]
          Length = 417

 Score = 33.9 bits (76), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S + A SGL    ARM +I  NIAN  T G       Y+   ++F+E+ 
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVG-------YKASRMTFKEIF 45


>gi|270262401|ref|ZP_06190672.1| flagellar hook protein FlgE [Serratia odorifera 4Rx13]
 gi|270043085|gb|EFA16178.1| flagellar hook protein FlgE [Serratia odorifera 4Rx13]
          Length = 410

 Score = 33.9 bits (76), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 8/59 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVRVKKIGVDQ 70
          SGL   +  + +I  NIAN+ T+G       ++  T+SF ++  GS  G+ VK  G+ Q
Sbjct: 8  SGLNAAATNLDVIGNNIANSATSG-------FKSGTVSFADMFAGSQVGLGVKVAGITQ 59


>gi|326389474|ref|ZP_08211041.1| fagellar hook-basal body protein [Thermoanaerobacter ethanolicus
          JW 200]
 gi|325994479|gb|EGD52904.1| fagellar hook-basal body protein [Thermoanaerobacter ethanolicus
          JW 200]
          Length = 417

 Score = 33.9 bits (76), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S + A SGL    ARM +I  NIAN  T G       Y+   ++F+E+ 
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVG-------YKASRMTFKEIF 45


>gi|255262922|ref|ZP_05342264.1| flagellar hook protein FlgE [Thalassiobium sp. R2A62]
 gi|255105257|gb|EET47931.1| flagellar hook protein FlgE [Thalassiobium sp. R2A62]
          Length = 422

 Score = 33.9 bits (76), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 7/60 (11%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          +GLA  ++++  IS+NIAN+ T G       Y+R    F  ++ GSG       GV  +T
Sbjct: 12 AGLAANASKLATISDNIANSSTFG-------YKRAGADFHSLVTGSGNGTYSAGGVSVTT 64


>gi|329898287|ref|ZP_08272370.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
          IMCC3088]
 gi|328920852|gb|EGG28295.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
          IMCC3088]
          Length = 261

 Score = 33.9 bits (76), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          AS  +A +GL  Q  RM +I+ N+AN  T G       +++    FE++++
Sbjct: 3  ASLWVAKTGLTAQQMRMTVIANNLANVNTVG-------FKKDRAVFEDLLY 46


>gi|149191155|ref|ZP_01869413.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
 gi|148834993|gb|EDL51972.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
          Length = 261

 Score = 33.9 bits (76), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++  I+ +G+A Q A+M  IS N+AN  T G       ++R  + FE++ +
Sbjct: 3  SALWISKTGMAAQDAKMTAISNNLANINTVG-------FKRDRVVFEDLFY 46


>gi|312962294|ref|ZP_07776785.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens
          WH6]
 gi|311283221|gb|EFQ61811.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens
          WH6]
          Length = 207

 Score = 33.9 bits (76), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 12/87 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +  +A +GL+ Q   +  IS N+AN  TTG       ++R    F+++++     ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTTISNNLANVSTTG-------FKRDRAEFQDLLY-----QI 48

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          KK    QST   E   G  +     IV
Sbjct: 49 KKQPGAQSTQDSELPSGLQLGTGVQIV 75


>gi|238764392|ref|ZP_04625342.1| Flagellar hook protein FlgE [Yersinia kristensenii ATCC 33638]
 gi|238697418|gb|EEP90185.1| Flagellar hook protein FlgE [Yersinia kristensenii ATCC 33638]
          Length = 437

 Score = 33.9 bits (76), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 8/59 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQ 70
          SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS  G+ VK  G+ Q
Sbjct: 8  SGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGITQ 59


>gi|149182500|ref|ZP_01860973.1| flagellar basal-body rod protein B [Bacillus sp. SG-1]
 gi|148849760|gb|EDL63937.1| flagellar basal-body rod protein B [Bacillus sp. SG-1]
          Length = 129

 Score = 33.9 bits (76), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +GL   SA+ ++IS+NIAN     DTP    Y+ K+ISF++ ++ S
Sbjct: 13 NGLNYSSAKQKVISQNIANV----DTPN---YKAKSISFKDQLNES 51


>gi|167037660|ref|YP_001665238.1| hypothetical protein Teth39_1248 [Thermoanaerobacter
          pseudethanolicus ATCC 33223]
 gi|320116075|ref|YP_004186234.1| flagellar hook-basal body protein [Thermoanaerobacter brockii
          subsp. finnii Ako-1]
 gi|166856494|gb|ABY94902.1| protein of unknown function DUF1078 domain protein
          [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319929166|gb|ADV79851.1| flagellar hook-basal body protein [Thermoanaerobacter brockii
          subsp. finnii Ako-1]
          Length = 417

 Score = 33.9 bits (76), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S + A SGL    ARM +I  NIAN  T G       Y+   ++F+E+ 
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVG-------YKASRMTFKEIF 45


>gi|288940411|ref|YP_003442651.1| flagellar basal-body rod protein FlgG [Allochromatium vinosum DSM
          180]
 gi|288895783|gb|ADC61619.1| flagellar basal-body rod protein FlgG [Allochromatium vinosum DSM
          180]
          Length = 263

 Score = 33.9 bits (76), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          IA +GL  Q  RM ++S N+AN  TTG       +++    FE++++ S
Sbjct: 7  IAKTGLDAQQTRMSVVSNNLANVNTTG-------FKKGRAVFEDLIYHS 48


>gi|90418365|ref|ZP_01226277.1| putative flagellar hook protein FlgE [Aurantimonas manganoxydans
          SI85-9A1]
 gi|90338037|gb|EAS51688.1| putative flagellar hook protein FlgE [Aurantimonas manganoxydans
          SI85-9A1]
          Length = 388

 Score = 33.9 bits (76), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          SG+  Q+ R+  +SENIAN+ T G       Y+R +  F  ++   GG
Sbjct: 12 SGMNAQANRLSTVSENIANSSTNG-------YKRNSTEFASLVLAQGG 52


>gi|322432968|ref|YP_004210217.1| flagellar hook-associated protein FlgK [Acidobacterium sp.
          MP5ACTX9]
 gi|321165195|gb|ADW70899.1| flagellar hook-associated protein FlgK [Acidobacterium sp.
          MP5ACTX9]
          Length = 457

 Score = 33.9 bits (76), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 7/69 (10%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L+++ + A+  L  Q A + + + NIANA T G       Y R+T+S +E    S G
Sbjct: 1  MISLMSTLNTASEALMAQEAEISVTNNNIANASTAG-------YTRETVSLQEAAPTSQG 53

Query: 61 VRVKKIGVD 69
                GV+
Sbjct: 54 ALSVGNGVE 62


>gi|157371207|ref|YP_001479196.1| flagellar hook protein FlgE [Serratia proteamaculans 568]
 gi|157322971|gb|ABV42068.1| flagellar basal body FlaE domain protein [Serratia proteamaculans
          568]
          Length = 407

 Score = 33.9 bits (76), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 8/59 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVRVKKIGVDQ 70
          SGL   +  + +I  NIAN+ T+G       ++  T+SF ++  GS  G+ VK  G+ Q
Sbjct: 8  SGLNAAATNLDVIGNNIANSATSG-------FKSGTVSFADMFAGSQVGLGVKVAGITQ 59


>gi|295097203|emb|CBK86293.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
          cloacae NCTC 9394]
          Length = 404

 Score = 33.9 bits (76), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 7/58 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          SGL   +  + ++  NIAN++T G       ++  +++F ++  G+ G+ V+  GV Q
Sbjct: 8  SGLNAAAKALDVVGNNIANSQTAG-------FKAGSVAFADIFAGTTGLGVQVAGVTQ 58


>gi|256750749|ref|ZP_05491634.1| protein of unknown function DUF1078 domain protein
          [Thermoanaerobacter ethanolicus CCSD1]
 gi|256750332|gb|EEU63351.1| protein of unknown function DUF1078 domain protein
          [Thermoanaerobacter ethanolicus CCSD1]
          Length = 417

 Score = 33.9 bits (76), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S + A SGL    ARM +I  NIAN  T G       Y+   ++F+E+ 
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVG-------YKASRMTFKEIF 45


>gi|119947175|ref|YP_944855.1| flagellar basal-body rod protein FlgG [Psychromonas ingrahamii
          37]
 gi|119865779|gb|ABM05256.1| flagellar basal-body rod protein FlgG [Psychromonas ingrahamii
          37]
          Length = 261

 Score = 33.9 bits (76), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           I+ +G+A Q A+M  IS N+AN  T G       ++R  + FE++ +
Sbjct: 6  WISKTGMAAQDAKMTAISNNLANINTVG-------FKRDRVVFEDLFY 46


>gi|167040321|ref|YP_001663306.1| hypothetical protein Teth514_1684 [Thermoanaerobacter sp. X514]
 gi|300914405|ref|ZP_07131721.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307724359|ref|YP_003904110.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
 gi|166854561|gb|ABY92970.1| protein of unknown function DUF1078 domain protein
          [Thermoanaerobacter sp. X514]
 gi|300889340|gb|EFK84486.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307581420|gb|ADN54819.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
          Length = 417

 Score = 33.9 bits (76), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S + A SGL    ARM +I  NIAN  T G       Y+   ++F+E+ 
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVG-------YKASRMTFKEIF 45


>gi|302392387|ref|YP_003828207.1| flagellar hook-basal body protein [Acetohalobium arabaticum DSM
          5501]
 gi|302204464|gb|ADL13142.1| flagellar hook-basal body protein [Acetohalobium arabaticum DSM
          5501]
          Length = 557

 Score = 33.9 bits (76), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 18/76 (23%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
          ++ S +   SGL     +M +I  NI+N  TTG       Y+   ++F+E+++       
Sbjct: 1  MMRSMYAGVSGLKAHQTKMDVIGNNISNVNTTG-------YKGSRVTFKEMLNQTMEGAS 53

Query: 57 ----GSGGVRVKKIGV 68
              G GG   ++IG+
Sbjct: 54 APQDGRGGTNPQQIGL 69


>gi|225569971|ref|ZP_03778996.1| hypothetical protein CLOHYLEM_06066 [Clostridium hylemonae DSM
          15053]
 gi|225161441|gb|EEG74060.1| hypothetical protein CLOHYLEM_06066 [Clostridium hylemonae DSM
          15053]
          Length = 294

 Score = 33.9 bits (76), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++ S + A +GL    ++M +IS NIAN  T G       Y+ ++ +F++ M+
Sbjct: 1  MVKSMYAAIAGLRSHQSKMDVISNNIANVNTWG-------YKSRSANFQDAMY 46


>gi|157147100|ref|YP_001454419.1| flagellar basal body rod protein FlgG [Citrobacter koseri ATCC
          BAA-895]
 gi|157084305|gb|ABV13983.1| hypothetical protein CKO_02877 [Citrobacter koseri ATCC BAA-895]
          Length = 261

 Score = 33.9 bits (76), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           I+ +GLA Q A+M  IS N+AN  TTG       ++R    F ++ +
Sbjct: 6  WISKTGLAAQDAKMTAISNNLANVNTTG-------FKRDRAMFADLFY 46


>gi|220934396|ref|YP_002513295.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp.
          HL-EbGR7]
 gi|219995706|gb|ACL72308.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp.
          HL-EbGR7]
          Length = 263

 Score = 33.9 bits (76), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 7/48 (14%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           IA +GL  Q  RM +IS N+AN  TTG       +++    F+++++
Sbjct: 6  WIAKTGLDAQQTRMSVISNNLANVNTTG-------FKKGRAVFQDLIY 46


>gi|28952050|ref|NP_240159.2| flagellar hook protein FlgE [Buchnera aphidicola str. APS
          (Acyrthosiphon pisum)]
 gi|219681699|ref|YP_002468085.1| flagellar hook protein FlgE [Buchnera aphidicola str. 5A
          (Acyrthosiphon pisum)]
 gi|257471395|ref|ZP_05635394.1| flagellar hook protein FlgE [Buchnera aphidicola str. LSR1
          (Acyrthosiphon pisum)]
 gi|219624542|gb|ACL30697.1| flagellar hook protein FlgE [Buchnera aphidicola str. 5A
          (Acyrthosiphon pisum)]
 gi|311086078|gb|ADP66160.1| flagellar hook protein FlgE [Buchnera aphidicola str. LL01
          (Acyrthosiphon pisum)]
 gi|311086649|gb|ADP66730.1| flagellar hook protein FlgE [Buchnera aphidicola str. TLW03
          (Acyrthosiphon pisum)]
 gi|311087235|gb|ADP67315.1| flagellar hook protein FlgE [Buchnera aphidicola str. JF99
          (Acyrthosiphon pisum)]
 gi|311087754|gb|ADP67833.1| flagellar hook protein FlgE [Buchnera aphidicola str. JF98
          (Acyrthosiphon pisum)]
          Length = 408

 Score = 33.9 bits (76), Expect = 7.9,   Method: Composition-based stats.
 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 8/75 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-RKTISFEEVMHGSGGVRVKK 65
          S  IA SGL   +  M+IIS NIANA T G       Y+ RK + F+   H         
Sbjct: 2  SNMIAISGLLANNDYMEIISNNIANASTIG-------YKSRKPLFFDMFSHSFYSNTTNG 54

Query: 66 IGVDQSTFVEEFDPG 80
           GV  S+ ++ F+ G
Sbjct: 55 YGVGISSIIQNFNNG 69


>gi|219682254|ref|YP_002468638.1| flagellar hook protein FlgE [Buchnera aphidicola str. Tuc7
          (Acyrthosiphon pisum)]
 gi|219621987|gb|ACL30143.1| flagellar hook protein FlgE [Buchnera aphidicola str. Tuc7
          (Acyrthosiphon pisum)]
          Length = 408

 Score = 33.9 bits (76), Expect = 8.0,   Method: Composition-based stats.
 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 8/75 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-RKTISFEEVMHGSGGVRVKK 65
          S  IA SGL   +  M+IIS NIANA T G       Y+ RK + F+   H         
Sbjct: 2  SNMIAISGLLANNDYMEIISNNIANASTIG-------YKSRKPLFFDMFSHSFYSNTTNG 54

Query: 66 IGVDQSTFVEEFDPG 80
           GV  S+ ++ F+ G
Sbjct: 55 YGVGISSIIQNFNNG 69


>gi|289578425|ref|YP_003477052.1| fagellar hook-basal body protein [Thermoanaerobacter italicus
          Ab9]
 gi|289528138|gb|ADD02490.1| fagellar hook-basal body protein [Thermoanaerobacter italicus
          Ab9]
          Length = 413

 Score = 33.9 bits (76), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S + A SGL    ARM +I  NIAN  T G       Y+   ++F+E+ 
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVG-------YKASRMTFKEIF 45


>gi|120601522|ref|YP_965922.1| hypothetical protein Dvul_0472 [Desulfovibrio vulgaris DP4]
 gi|120561751|gb|ABM27495.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris DP4]
          Length = 125

 Score = 33.9 bits (76), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 17/118 (14%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           + + + NIAN  T       D +R     +E    G  GVRV +I   +ST       G 
Sbjct: 17  LGVTANNIANVNT-------DGFRASQTRYE-TGPGGEGVRVGEI--RESTTPGPLHEGM 66

Query: 82  PVANASG-------IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +    G       +V+  N +   E   M ET R + AN+ +I+   DM    LD++
Sbjct: 67  GIVEREGRMEQQRVLVEGSNTDTAREMVSMMETQRAHEANVASIRAHDDMTGVVLDIM 124


>gi|153837069|ref|ZP_01989736.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
          AQ3810]
 gi|149749657|gb|EDM60402.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
          AQ3810]
          Length = 261

 Score = 33.9 bits (76), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++  ++ +G+A Q  +M +IS N+AN  T G       ++R  + FE++ +
Sbjct: 3  SALWVSKTGMAAQDTKMTVISNNLANVNTVG-------FKRDRVVFEDLFY 46


>gi|254475161|ref|ZP_05088547.1| flagellar hook protein FlgE [Ruegeria sp. R11]
 gi|214029404|gb|EEB70239.1| flagellar hook protein FlgE [Ruegeria sp. R11]
          Length = 441

 Score = 33.9 bits (76), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 14/61 (22%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------GGVRVKK 65
          SGL   ++R+  IS+NIAN+ T G       Y+R    F  ++ GS       GGVR   
Sbjct: 19 SGLTANASRLASISDNIANSSTAG-------YKRVQTDFHSMVMGSSGGTYSAGGVRTTN 71

Query: 66 I 66
          +
Sbjct: 72 V 72


>gi|260222468|emb|CBA32062.1| hypothetical protein Csp_D30240 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 104

 Score = 33.9 bits (76), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 10/69 (14%)

Query: 73  FVEEFDPGHPVANASGIVKY----------PNVNVLVETADMRETNRLYMANLQTIKQSH 122
           ++E    G PV  + G  K+           NV++  E  +M    R Y AN QTIK   
Sbjct: 35  WIETSASGQPVLGSPGEGKFGKTRSGALEDSNVDLTGELVNMMTAQRNYQANAQTIKTQD 94

Query: 123 DMMTTTLDL 131
            +M+T ++L
Sbjct: 95  QIMSTLVNL 103


>gi|209966998|ref|YP_002299913.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
 gi|209960464|gb|ACJ01101.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
          Length = 655

 Score = 33.9 bits (76), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 14/58 (24%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVRVK 64
          GL  QS  +  IS+NIAN++T G       Y+R   SF+ ++       H  GGVR +
Sbjct: 13 GLTAQSRSLGHISDNIANSQTIG-------YKRVETSFQNLITQSNSSVHSPGGVRAR 63


>gi|83858797|ref|ZP_00952319.1| flagellar basal body rod protein [Oceanicaulis alexandrii
          HTCC2633]
 gi|83853620|gb|EAP91472.1| flagellar basal body rod protein [Oceanicaulis alexandrii
          HTCC2633]
          Length = 138

 Score = 33.9 bits (76), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          +    AR ++I+EN+ANA T G TP   P       FE V+ G  G+
Sbjct: 16 MGYHGARQRVIAENVANANTPGYTPNDIPRS----EFERVLAGQQGL 58


>gi|187778772|ref|ZP_02995245.1| hypothetical protein CLOSPO_02367 [Clostridium sporogenes ATCC
          15579]
 gi|187772397|gb|EDU36199.1| hypothetical protein CLOSPO_02367 [Clostridium sporogenes ATCC
          15579]
          Length = 266

 Score = 33.9 bits (76), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          M  L+ +   + SGL  Q  ++  IS N+AN  T G       Y+R+ +SF+E++ 
Sbjct: 1  MMILLRALWNSKSGLIAQQNKLDSISNNLANVNTVG-------YKREDVSFQELVQ 49


>gi|91776309|ref|YP_546065.1| flagellar hook protein FlgE [Methylobacillus flagellatus KT]
 gi|91710296|gb|ABE50224.1| protein of unknown function DUF1078-like protein [Methylobacillus
           flagellatus KT]
          Length = 410

 Score = 33.9 bits (76), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 12/79 (15%)

Query: 63  VKKIGVDQSTFVEEFDPGHP---VANASGI-------VKYPNVNVLVETADMRETNRLYM 112
           ++ +G +Q  + E  + G P   VAN+ G+       ++  NV++  E  +M    R+Y 
Sbjct: 333 LQPLGDNQ--WAETSESGPPIVGVANSGGLGVLQSYRLEDSNVDLTAELVNMITAQRVYQ 390

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN QTIK    +M T ++L
Sbjct: 391 ANAQTIKTEDQIMQTLVNL 409


>gi|326404069|ref|YP_004284151.1| flagellar basal-body rod protein FlgG [Acidiphilium multivorum
          AIU301]
 gi|325050931|dbj|BAJ81269.1| flagellar basal-body rod protein FlgG [Acidiphilium multivorum
          AIU301]
          Length = 260

 Score = 33.9 bits (76), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 7/47 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          IA +G+  Q   +++IS NIAN  TTG       Y+ + ++F+++++
Sbjct: 6  IAATGMQAQQTNVEVISNNIANMTTTG-------YKAQRVAFQDLLY 45


>gi|313497764|gb|ADR59130.1| FlgG [Pseudomonas putida BIRD-1]
          Length = 261

 Score = 33.9 bits (76), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 12/87 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F ++++     ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFADLLY-----QI 48

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          K+    QST   E   G  V     IV
Sbjct: 49 KRQPGAQSTQDSELPSGLQVGTGVRIV 75


>gi|83589631|ref|YP_429640.1| hypothetical protein Moth_0779 [Moorella thermoacetica ATCC
          39073]
 gi|83572545|gb|ABC19097.1| conserved hypothetical protein [Moorella thermoacetica ATCC
          39073]
          Length = 275

 Score = 33.9 bits (76), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++ S +   SGL     RM +I +NIAN  T G       ++R  ++F++V +
Sbjct: 1  MMRSLYSGVSGLRTHQTRMDVIGDNIANVNTVG-------FKRSAVTFKDVFY 46


>gi|296534160|ref|ZP_06896654.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
          49957]
 gi|296265515|gb|EFH11646.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
          49957]
          Length = 262

 Score = 33.9 bits (76), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 7/50 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          S +IA +G+  Q   +++IS NIAN  TT        Y+R+   F+++++
Sbjct: 3  SLNIAGTGMMAQQTNVEVISNNIANMSTT-------AYKRRRAEFQDLLY 45


>gi|167034941|ref|YP_001670172.1| flagellar basal body rod protein FlgG [Pseudomonas putida GB-1]
 gi|166861429|gb|ABY99836.1| flagellar basal-body rod protein FlgG [Pseudomonas putida GB-1]
          Length = 261

 Score = 33.9 bits (76), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 12/87 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F ++++     ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFADLLY-----QI 48

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          K+    QST   E   G  V     IV
Sbjct: 49 KRQPGAQSTQDSELPSGLQVGTGVRIV 75


>gi|301168116|emb|CBW27702.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
          Length = 135

 Score = 33.5 bits (75), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 30/129 (23%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           S L  +  R +IIS NIANA    +TPG   Y+ K + FE+ +        + + VD   
Sbjct: 13  SSLNFRQMRQEIISSNIANA----ETPG---YKAKRVDFEQAL-------ARALDVDGQQ 58

Query: 73  FVEEFDPGHPVANASG-------IVKYPN---------VNVLVETADMRETNRLYMANLQ 116
            +   D  H    + G       + + PN         V+   E A M E   LY A +Q
Sbjct: 59  QLNTEDSRHFDVGSGGFGNLQPEVYEDPNGIVSEDGNTVDRDAELARMAENKILYDATVQ 118

Query: 117 TIKQSHDMM 125
            I +   +M
Sbjct: 119 LINKKFGLM 127


>gi|227820875|ref|YP_002824845.1| flagellar hook protein FlgE [Sinorhizobium fredii NGR234]
 gi|227339874|gb|ACP24092.1| putative flagellar hook protein FlgE [Sinorhizobium fredii
          NGR234]
          Length = 404

 Score = 33.5 bits (75), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 14/59 (23%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGGVRVK 64
          SG+  Q+ R+  ++ENIAN+ TTG       Y+R +  F  ++       + SGGV   
Sbjct: 12 SGMNAQANRLSTVAENIANSSTTG-------YKRASTEFSSMILPSSNGSYNSGGVETS 63


>gi|58039417|ref|YP_191381.1| flagellar basal body rod protein FlgG [Gluconobacter oxydans 621H]
 gi|58001831|gb|AAW60725.1| Flagellar basal-body rod protein FlgG [Gluconobacter oxydans 621H]
          Length = 263

 Score = 33.5 bits (75), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 23/44 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G V+  NVNV+ E  D+    R Y  N + I  S DMM T  +L
Sbjct: 217 GYVENSNVNVVTEITDLITAQRAYEMNSKVITASDDMMKTVTNL 260


>gi|121601827|ref|YP_989383.1| flagellar hook protein FlgE [Bartonella bacilliformis KC583]
 gi|120614004|gb|ABM44605.1| flagellar hook protein FlgE [Bartonella bacilliformis KC583]
          Length = 404

 Score = 33.5 bits (75), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 7/51 (13%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          H + SG+  Q  R+  I+EN+ANA T G       Y+R  + F   +  SG
Sbjct: 8  HTSVSGMNAQGKRLSGIAENVANAGTVG-------YKRTNVQFSNYVTPSG 51


>gi|254464969|ref|ZP_05078380.1| flagellar hook protein FlgE [Rhodobacterales bacterium Y4I]
 gi|206685877|gb|EDZ46359.1| flagellar hook protein FlgE [Rhodobacterales bacterium Y4I]
          Length = 435

 Score = 33.5 bits (75), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 8/49 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-VMHGSGG 60
          SGL+  ++R+  IS+NIAN+ T G       Y+R    F   V+ GSGG
Sbjct: 12 SGLSANASRLASISDNIANSSTRG-------YKRVQTDFHSMVLSGSGG 53


>gi|254440385|ref|ZP_05053879.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198255831|gb|EDY80145.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 432

 Score = 33.5 bits (75), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSGGVRVKKIGVDQ 70
          +GLA  ++R+  IS+NIAN+ T G       Y+R    F  ++   G G      +GV  
Sbjct: 12 AGLASNASRLATISDNIANSSTYG-------YKRVVADFHSMVVDGGKGKYTAGGVGVTT 64

Query: 71 STFVEEFDPGHPVANAS 87
             ++E  P    +NA+
Sbjct: 65 QRLIDERGPLVATSNAT 81


>gi|188580158|ref|YP_001923603.1| flagellar hook-associated protein FlgK [Methylobacterium populi
          BJ001]
 gi|179343656|gb|ACB79068.1| flagellar hook-associated protein FlgK [Methylobacterium populi
          BJ001]
          Length = 632

 Score = 33.5 bits (75), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 7/57 (12%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
          A +GL V  A++ ++S+NIAN  T G       Y R+T+S      G+ GV    IG
Sbjct: 9  ATAGLRVTQAQIGVVSQNIANVGTAG-------YVRRTLSPVAAGVGNAGVATGTIG 58


>gi|300024588|ref|YP_003757199.1| flagellar hook-basal body protein [Hyphomicrobium denitrificans
          ATCC 51888]
 gi|299526409|gb|ADJ24878.1| flagellar hook-basal body protein [Hyphomicrobium denitrificans
          ATCC 51888]
          Length = 417

 Score = 33.5 bits (75), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 7/43 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          SG+AVQS RM  +++NIAN  TTG       Y+  +  F  ++
Sbjct: 12 SGMAVQSDRMGTVADNIANVNTTG-------YKEASAEFATLV 47


>gi|121607561|ref|YP_995368.1| flagellar basal body FlaE domain-containing protein
           [Verminephrobacter eiseniae EF01-2]
 gi|121552201|gb|ABM56350.1| flagellar basal body FlaE domain protein [Verminephrobacter
           eiseniae EF01-2]
          Length = 426

 Score = 33.5 bits (75), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 26/45 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y AN QT+K    +M+T ++L
Sbjct: 381 SGALEDSNVDLTAELVNMMTAQRTYQANAQTVKTQDQVMSTLVNL 425


>gi|11386807|sp|P57422|FLGE_BUCAI RecName: Full=Flagellar hook protein flgE
 gi|25403598|pir||E84969 flagellar hook protein flgE [imported] - Buchnera sp.  (strain
          APS)
 gi|10039011|dbj|BAB13045.1| flagellar hook protein flgE [Buchnera aphidicola str. APS
          (Acyrthosiphon pisum)]
          Length = 405

 Score = 33.5 bits (75), Expect = 9.5,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 8/72 (11%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-RKTISFEEVMHGSGGVRVKKIGV 68
          IA SGL   +  M+IIS NIANA T G       Y+ RK + F+   H          GV
Sbjct: 2  IAISGLLANNDYMEIISNNIANASTIG-------YKSRKPLFFDMFSHSFYSNTTNGYGV 54

Query: 69 DQSTFVEEFDPG 80
            S+ ++ F+ G
Sbjct: 55 GISSIIQNFNNG 66


>gi|319781665|ref|YP_004141141.1| flagellar hook-basal body protein [Mesorhizobium ciceri biovar
          biserrulae WSM1271]
 gi|317167553|gb|ADV11091.1| flagellar hook-basal body protein [Mesorhizobium ciceri biovar
          biserrulae WSM1271]
          Length = 419

 Score = 33.5 bits (75), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 7/68 (10%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          SG+  Q+ R+  +++NIAN+ TTG       Y+R +  F  ++  S G      GV  + 
Sbjct: 12 SGMNAQANRLSTVADNIANSDTTG-------YKRSSAEFSTLVMPSTGGAYNSGGVTTTI 64

Query: 73 FVEEFDPG 80
               DPG
Sbjct: 65 RQAVSDPG 72


>gi|238919259|ref|YP_002932774.1| flagellar hook protein FlgE [Edwardsiella ictaluri 93-146]
 gi|238868828|gb|ACR68539.1| flagellar hook protein FlgE [Edwardsiella ictaluri 93-146]
          Length = 424

 Score = 33.5 bits (75), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 8/59 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVRVKKIGVDQ 70
          SG+   S ++ +I  NIAN++T G       ++  +++F ++  GS  G+ VK   VDQ
Sbjct: 8  SGMNAASTQLDVIGNNIANSQTVG-------FKSGSVTFADMFAGSKIGLGVKVASVDQ 59


>gi|114330363|ref|YP_746585.1| flagellar basal body rod protein FlgG [Nitrosomonas eutropha C91]
 gi|114307377|gb|ABI58620.1| flagellar basal-body rod protein FlgG [Nitrosomonas eutropha C91]
          Length = 260

 Score = 33.5 bits (75), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)

Query: 78  DPGHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +PG P  N       G V+  NVNV+ E  +M +T R Y  N ++I+ S  M++
Sbjct: 202 NPGIPGTNGIGLLNQGFVETSNVNVVEELVEMIQTQRAYEINSRSIQTSDQMLS 255


>gi|222147589|ref|YP_002548546.1| flagellar hook protein FlgE [Agrobacterium vitis S4]
 gi|221734577|gb|ACM35540.1| flagellar hook protein [Agrobacterium vitis S4]
          Length = 418

 Score = 33.5 bits (75), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 15/71 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------EEVM 55
          L  S + A SGL  Q++++  + +N+AN+ TTG       Y+R + +F            
Sbjct: 3  LSGSMNTAVSGLQAQASKLSTVGDNVANSDTTG-------YKRVSTAFSSLVVGSSGSGT 55

Query: 56 HGSGGVRVKKI 66
          + SGGV+   +
Sbjct: 56 YNSGGVQTTTV 66


>gi|315180485|gb|ADT87399.1| flagellar hook protein E [Vibrio furnissii NCTC 11218]
          Length = 397

 Score = 33.5 bits (75), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIAN  TTG       ++     F  V +G  +GGV+V 
Sbjct: 2  SFNIALSGLNASNQELNTISNNIANVSTTG-------FKESRTEFGSVYNGQQAGGVQVM 54

Query: 65 KI 66
           I
Sbjct: 55 GI 56


Searching..................................................done


Results from round 2




>gi|313673746|ref|YP_004051857.1| flagellar basal-body rod protein flgc [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940502|gb|ADR19694.1| flagellar basal-body rod protein FlgC [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 134

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 53/132 (40%), Positives = 82/132 (62%), Gaps = 3/132 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGV 61
                ++A +GL+ Q  R+ +IS N+ANA TT  T   +PY+RK + F+E++ G  +GGV
Sbjct: 3   FFNILNVAATGLSAQRIRINVISSNLANANTT-KTETGEPYKRKDVVFKELLEGEYTGGV 61

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           RV+K+  D+  FV +++PGHP AN  G V+YPNVN + E  +M E +R Y AN+  +  +
Sbjct: 62  RVEKVVEDKKPFVLKYEPGHPDANEEGYVQYPNVNPIEEMVNMIEASRSYEANVTVLNTA 121

Query: 122 HDMMTTTLDLLR 133
             +    LD+ R
Sbjct: 122 KQLAMRALDIGR 133


>gi|291278935|ref|YP_003495770.1| flagellar basal-body rod protein FlgC [Deferribacter desulfuricans
           SSM1]
 gi|290753637|dbj|BAI80014.1| flagellar basal-body rod protein FlgC [Deferribacter desulfuricans
           SSM1]
          Length = 134

 Score =  204 bits (519), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 4/135 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M Y      IA++GL+ Q  R+ +IS N+ANA TT  T    PY+++ + F  ++ G   
Sbjct: 1   MSY-FDILKIASTGLSAQRIRINVISSNLANANTTR-TEDGTPYQKREVIFRTILDGELR 58

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGVRV+K+  D+   + +++PGHP AN  G V YPN+N + E  +M E +R Y AN+  +
Sbjct: 59  GGVRVEKVVRDEKPPILKYEPGHPDANEEGYVAYPNINPIEEMVNMLEASRSYEANVTVL 118

Query: 119 KQSHDMMTTTLDLLR 133
             +  +    L++ R
Sbjct: 119 NTAKQLALKALEIGR 133


>gi|302389656|ref|YP_003825477.1| flagellar basal-body rod protein FlgC [Thermosediminibacter oceani
           DSM 16646]
 gi|302200284|gb|ADL07854.1| flagellar basal-body rod protein FlgC [Thermosediminibacter oceani
           DSM 16646]
          Length = 147

 Score =  203 bits (518), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 71/146 (48%), Gaps = 16/146 (10%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----- 57
            +  S  I+ SGL  Q  RM +IS NIAN  TT    G  PYRR+ + F+E   G     
Sbjct: 2   EIFRSLEISASGLTAQRLRMDVISNNIANVNTTRTEEGG-PYRRQRVIFQERKRGLTFKD 60

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GVRV  I  D S F   +DP HP A+  G V+ PNVN++ E  DM   
Sbjct: 61  VISGMSSTQPGAGVRVVSIEKDPSPFKLVYDPSHPDADQMGYVRMPNVNIVTEMVDMISA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+  I  +  M+T  L++ R
Sbjct: 121 TRSYEANITAINSAKGMITKALEIGR 146


>gi|312135856|ref|YP_004003194.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           owensensis OL]
 gi|311775907|gb|ADQ05394.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           owensensis OL]
          Length = 145

 Score =  203 bits (517), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           +  + +I++S L  Q  RM +I++NIANA TT  T    PYRRK + FEE          
Sbjct: 1   MFDAINISSSALTAQRVRMDVIAQNIANANTTR-TENGQPYRRKIVVFEERKQNFSQILN 59

Query: 57  ---------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                     SGGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E 
Sbjct: 60  QKIEQIQASSSGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN+  +  +  M+T T ++ +
Sbjct: 120 SRSYEANVTALNITKSMITRTFEIGK 145


>gi|312621566|ref|YP_004023179.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202033|gb|ADQ45360.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 145

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 80/146 (54%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +  + +I++S L+ Q  RM +I++NIANA TT  T    PYRRK + FEE          
Sbjct: 1   MFDAINISSSALSAQRVRMDVIAQNIANANTTR-TENGQPYRRKVVVFEESKQSFADILS 59

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E 
Sbjct: 60  QKIGKDQTSSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN+  +  +  M+T T ++ +
Sbjct: 120 SRSYEANVTALNITKSMITRTFEIGK 145


>gi|222530141|ref|YP_002574023.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222456988|gb|ACM61250.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 145

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           +  + +I++S L+ Q  RM +I++NIANA TT  T    PYRRK + FEE          
Sbjct: 1   MFDAINISSSALSAQRVRMDVIAQNIANANTTR-TENGQPYRRKVVVFEERKLSFANILS 59

Query: 54  --VMHGS----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +  G+    GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E 
Sbjct: 60  QKIGEGTTSFYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN+  +  +  M+T T ++ +
Sbjct: 120 SRSYEANVTALNITKSMITRTFEIGK 145


>gi|125972984|ref|YP_001036894.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           ATCC 27405]
 gi|256004781|ref|ZP_05429756.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
           2360]
 gi|281417195|ref|ZP_06248215.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           JW20]
 gi|125713209|gb|ABN51701.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           ATCC 27405]
 gi|255991231|gb|EEU01338.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
           2360]
 gi|281408597|gb|EFB38855.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           JW20]
 gi|316940780|gb|ADU74814.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
           1313]
          Length = 147

 Score =  201 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 69/145 (47%), Gaps = 17/145 (11%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------- 56
             S  I+ S L  Q  RM  IS+NIANA TT  T    PYRRKT+ FEE           
Sbjct: 4   FTSLDISASALTAQRLRMDTISQNIANANTTR-TENGQPYRRKTVLFEEKSSTGSFSEYL 62

Query: 57  --------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GVRV  I  D+S F   +DPGHP A+  G V  PNV+V+ E  +M    
Sbjct: 63  ENSIRGKTAGAGVRVTGIVEDRSPFKRVYDPGHPDADEEGYVLMPNVDVITEMVNMISAT 122

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  I  +  +    L++ R
Sbjct: 123 RAYEANITAINTTKGLAMKALEIGR 147


>gi|20807891|ref|NP_623062.1| flagellar basal body rod protein [Thermoanaerobacter tengcongensis
           MB4]
 gi|20516456|gb|AAM24666.1| Flagellar basal body rod protein [Thermoanaerobacter tengcongensis
           MB4]
          Length = 146

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L +S  I+ +GL  +  RM ++S+NIANA TT    G  PYRRK + F+E+   S     
Sbjct: 3   LFSSMDISATGLTAERVRMDVVSQNIANANTTRTVQGG-PYRRKLVVFKEIQPDSFQSIL 61

Query: 59  ---------GGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GV V +I  D Q+     +DPGHP A+  G V YPNVN++ E  DM    
Sbjct: 62  EKVKGKYTGKGVEVVQIIEDEQTPLRRVYDPGHPDADQQGYVSYPNVNIVAEMVDMISAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+     +  M   +L++ +
Sbjct: 122 RAYEANVTAFNAAKSMFQKSLEIGK 146


>gi|302872573|ref|YP_003841209.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575432|gb|ADL43223.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 145

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +  + +I++S L  Q  RM +I++NIANA TT  T    PYRRK + FEE          
Sbjct: 1   MFDAINISSSALTAQRVRMDVIAQNIANANTTR-TESGQPYRRKIVVFEERKQSFADILT 59

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E 
Sbjct: 60  QKIGEAANSYYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN+  +  +  M+T T ++ +
Sbjct: 120 SRSYEANVTALNITKSMITRTFEIGK 145


>gi|160903121|ref|YP_001568702.1| flagellar basal-body rod protein FlgC [Petrotoga mobilis SJ95]
 gi|160360765|gb|ABX32379.1| flagellar basal-body rod protein FlgC [Petrotoga mobilis SJ95]
          Length = 140

 Score =  200 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 56/140 (40%), Positives = 73/140 (52%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD L     IA SG+  +  R+ +IS+N+AN+ TT    G  PYRRK + F+E +  S  
Sbjct: 2   MDGLFKVLDIAASGMTAERFRLDVISQNLANSDTTRTEEGG-PYRRKAVIFQEALSESTN 60

Query: 59  -----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                GGV+V  I  D S F   +DP HP A+A G V YPNVNVL E  DM    R Y  
Sbjct: 61  GDRNFGGVKVSSIVEDPSPFRLVYDPNHPDADAEGYVSYPNVNVLREMVDMMSAQRAYEM 120

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           N   +  +  M  + L + R
Sbjct: 121 NAAVVNSAKSMYNSALGIGR 140


>gi|37525839|ref|NP_929183.1| flagellar basal body rod protein FlgC [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|36785268|emb|CAE14209.1| Flagellar basal-body rod protein FlgC (Putative proximal rod
           protein) [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 134

 Score =  200 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHGSGG 60
           L++   IA S L+ QS R+ + + N+ANA +    P   PYR K + F         +GG
Sbjct: 3   LLSIFDIAGSALSAQSQRLNVSASNMANADSVAG-PDGQPYRAKQVVFRVAAPAGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV +I  D + F  E+ PGHP+A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVSEIVDDPTPFRLEYQPGHPLADEKGYVRMPNVDVVGEMINTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  MM  TL L +
Sbjct: 122 TKSMMLKTLTLGQ 134


>gi|289578436|ref|YP_003477063.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter italicus
           Ab9]
 gi|297544712|ref|YP_003677014.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528149|gb|ADD02501.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter italicus
           Ab9]
 gi|296842487|gb|ADH61003.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 147

 Score =  200 bits (509), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS--------FEEVM 55
           L +S  I+ SGL  +  RM +IS+NIAN  TT  + G  PYRRK +         FE ++
Sbjct: 3   LFSSMDISASGLTAERVRMDVISQNIANVNTTRTSQGG-PYRRKLVVLKEIQPDSFESIL 61

Query: 56  H------GSGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GV V +I  D Q+   E +DPGHP A+ +G V+YPNVN++ E  DM    
Sbjct: 62  DKVKGKYSGKGVEVVQIAEDDQTPLREVYDPGHPDADQNGYVEYPNVNIVSEMVDMISAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+     S  M   +L++ R
Sbjct: 122 RAYEANVTAFNASKAMFQKSLEIGR 146


>gi|312126817|ref|YP_003991691.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776836|gb|ADQ06322.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 147

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +  + +I++S L  Q  RM +I++NIANA TT  T    PYRRK + FEE          
Sbjct: 3   MFDAINISSSALTAQRVRMDVIAQNIANANTT-KTENGQPYRRKVVVFEERRQSFAEILS 61

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E 
Sbjct: 62  QKIGQAQASSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN+  +  +  M+T T ++ +
Sbjct: 122 SRSYEANVTALNITKSMITRTFEIGK 147


>gi|220929470|ref|YP_002506379.1| flagellar basal-body rod protein FlgC [Clostridium cellulolyticum
           H10]
 gi|219999798|gb|ACL76399.1| flagellar basal-body rod protein FlgC [Clostridium cellulolyticum
           H10]
          Length = 147

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
           + ++  I+ SGL  Q  RM  IS+NIANA TT  T    PYRR+ + FEE          
Sbjct: 3   IFSALDISASGLTAQRVRMDTISQNIANANTTRTT-DGTPYRRRDVVFEERTDSNSFSRT 61

Query: 55  -------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  ++G  GVRV  I  D + F + FDPGHP A+A G V  PNV+++ E  +M   
Sbjct: 62  LENASSKLNGGNGVRVSSIVEDPTEFKKVFDPGHPDADAEGYVNMPNVDIVTEMVNMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+ ++  +  M    L++ +
Sbjct: 122 TRSYEANVTSVNATKSMALKALEIGK 147


>gi|312792645|ref|YP_004025568.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179785|gb|ADQ39955.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 147

 Score =  199 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +  + +I++S LA Q  RM +I++NIANA TT  T    PYRRK + FEE          
Sbjct: 3   MFDAINISSSALAAQRVRMDVIAQNIANANTTR-TENGQPYRRKVVVFEERKQSFADILT 61

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E 
Sbjct: 62  QKIGQAQSSSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN+  +  +  M+T T ++ +
Sbjct: 122 SRSYEANVTALNITKSMITRTFEIGK 147


>gi|310659047|ref|YP_003936768.1| flagellar component of cell-proximal portion of basal-body rod
           [Clostridium sticklandii DSM 519]
 gi|308825825|emb|CBH21863.1| flagellar component of cell-proximal portion of basal-body rod
           [Clostridium sticklandii]
          Length = 146

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
           + +S +I+ S L  +  RM +IS+N+ANA TT  T   DPYRR+ + F+E          
Sbjct: 3   IFSSINISASALTAERTRMDVISKNLANANTTR-TQSGDPYRRQVVVFKEADEKQSFKSI 61

Query: 56  -------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                   G  GV +  I  D++ F + ++PGHP A+  G V   NV+ + E  DM    
Sbjct: 62  FESKKSKDGDKGVEIVGIVEDKTPFRQVYNPGHPDADEKGYVTMSNVDTITEMVDMISAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  +  S  M+   L++ +
Sbjct: 122 RSYEANVTALNTSKSMLLKALEIGK 146


>gi|167037671|ref|YP_001665249.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040332|ref|YP_001663317.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X514]
 gi|256750738|ref|ZP_05491623.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300914416|ref|ZP_07131732.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X561]
 gi|307264864|ref|ZP_07546426.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|307724348|ref|YP_003904099.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X513]
 gi|320116086|ref|YP_004186245.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|326389485|ref|ZP_08211052.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus JW 200]
 gi|166854572|gb|ABY92981.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X514]
 gi|166856505|gb|ABY94913.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256750321|gb|EEU63340.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300889351|gb|EFK84497.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X561]
 gi|306920122|gb|EFN50334.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|307581409|gb|ADN54808.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X513]
 gi|319929177|gb|ADV79862.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|325994490|gb|EGD52915.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 147

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 75/145 (51%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS--------FEEVM 55
           L +S  I+ SGL  +  RM II++NIAN  TT    G  PYRRK +         FE ++
Sbjct: 3   LFSSMDISASGLTAERLRMDIIAQNIANVNTTRTVQGG-PYRRKLVVLKEIQPDSFESIL 61

Query: 56  H------GSGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GV V +I  D Q+   E +DPGHP A+ +G V+YPNVN++ E  DM    
Sbjct: 62  DKVKGKYSGKGVEVVQIAEDDQTPLREVYDPGHPDADQNGYVEYPNVNIVSEMVDMISAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+     S  M   +L++ R
Sbjct: 122 RAYEANVTAFNASKAMFQKSLEIGR 146


>gi|326204628|ref|ZP_08194484.1| flagellar basal-body rod protein FlgC [Clostridium papyrosolvens
           DSM 2782]
 gi|325985195|gb|EGD46035.1| flagellar basal-body rod protein FlgC [Clostridium papyrosolvens
           DSM 2782]
          Length = 147

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 52/146 (35%), Positives = 76/146 (52%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
           + ++  I+ SGL  Q  RM  IS+NIANA TT  T    PYRR+ + FEE          
Sbjct: 3   IFSALDISASGLTAQRVRMDTISQNIANANTTR-TADGTPYRRREVVFEERSDSNSFSQA 61

Query: 55  -------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  ++G  GVRV  I  D + F + +DPGHP A+A G V  PNV+++ E  +M   
Sbjct: 62  LENASSKLNGGNGVRVSSIVEDPTDFKKVYDPGHPDADAEGYVNMPNVDIVTEMVNMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+ ++  +  M    L++ +
Sbjct: 122 TRSYEANVTSVNATKSMALKALEIGK 147


>gi|312876494|ref|ZP_07736477.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796705|gb|EFR13051.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 147

 Score =  198 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +  + +I++S LA Q  RM +I++NIANA TT  T    PYRRK + FEE          
Sbjct: 3   MFDAINISSSALAAQRVRMDVIAQNIANANTTR-TENGQPYRRKVVVFEERKQSFSDILN 61

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E 
Sbjct: 62  QKIGQAQASSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN+  +  +  M+T T ++ +
Sbjct: 122 SRSYEANVTALNITKSMITRTFEIGK 147


>gi|253990129|ref|YP_003041485.1| flagellar basal body rod protein FlgC [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|211639034|emb|CAR67648.1| flagellar basal-body rod protein flgc (putative proximal rod
           protein) [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781579|emb|CAQ84742.1| flagellar basal-body rod protein flgc (putative proximal rod
           protein) [Photorhabdus asymbiotica]
          Length = 134

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHGSGG 60
           L++   IA S L+ QS R+ + + N+ANA +    P   PYR K + F         +GG
Sbjct: 3   LLSVFDIAGSALSAQSQRLNVSASNMANADSVAG-PDGQPYRAKQVVFRVAAPAGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV +I  D + F  E+ PGHP+A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVSEIVDDPTPFRLEYQPGHPLADEKGYVRMPNVDVVGEMINTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMLKTLTLGQ 134


>gi|254780380|ref|YP_003064793.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040057|gb|ACT56853.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 134

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 134/134 (100%), Positives = 134/134 (100%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG
Sbjct: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ
Sbjct: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120

Query: 121 SHDMMTTTLDLLRD 134
           SHDMMTTTLDLLRD
Sbjct: 121 SHDMMTTTLDLLRD 134


>gi|222084863|ref|YP_002543392.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722311|gb|ACM25467.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 138

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 77/137 (56%), Positives = 104/137 (75%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++++SENIANAR+TGDTPG+DPYRRKT++F   +  + G
Sbjct: 1   MDPLSAALKIAGSGLEAQSTRLRVVSENIANARSTGDTPGADPYRRKTVTFGAELDRANG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+G D   FVE++DP +P A+  G VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VTTVGVKKMGEDTGKFVEQYDPDNPAADQKGYVKMPNVNILVEMADMREANRSYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           ++Q+ D++++T+DLL++
Sbjct: 121 VRQARDLISSTIDLLKN 137


>gi|254470324|ref|ZP_05083728.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
 gi|211960635|gb|EEA95831.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
          Length = 136

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 67/136 (49%), Positives = 86/136 (63%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           MD++  S  IA SGL  Q+ RM++I+ENIANA +TG TPG DPYRRK  +F         
Sbjct: 1   MDFI-KSMFIAASGLKAQTGRMRVIAENIANADSTGQTPGEDPYRRKVPTFSSSFDAKVE 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V++ ++  D+S F   ++P HP AN  G VK PNVN LVE ADM+E  R Y ANL  
Sbjct: 60  AELVKLGRVREDKSEFKLRYEPDHPAANDKGYVKMPNVNTLVEMADMQEATRSYEANLNV 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +K S  MM  TLD+LR
Sbjct: 120 VKSSRSMMQKTLDILR 135


>gi|209963543|ref|YP_002296458.1| flagellar basal-body rod protein FlgC, putative [Rhodospirillum
           centenum SW]
 gi|209957009|gb|ACI97645.1| flagellar basal-body rod protein FlgC, putative [Rhodospirillum
           centenum SW]
          Length = 137

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 70/136 (51%), Positives = 94/136 (69%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD L +S  IA SG+  Q+ R+++++EN+ANA +TG+TPG+DPYRRKTI F+ V+  +  
Sbjct: 1   MDPLASSFGIAASGMKAQATRLRVVAENMANASSTGETPGADPYRRKTIVFDSVLDRALR 60

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              VRVK IG D S F   ++PGHP A+A G VK PNVN LVE  DMRE  R Y ANL  
Sbjct: 61  ADTVRVKTIGRDSSDFRLSYEPGHPAADAKGYVKLPNVNTLVEMMDMREAGRSYEANLNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           ++Q+  M+  T+D+LR
Sbjct: 121 LQQARGMLGRTIDMLR 136


>gi|303240290|ref|ZP_07326809.1| flagellar basal-body rod protein FlgC [Acetivibrio cellulolyticus
           CD2]
 gi|302592200|gb|EFL61929.1| flagellar basal-body rod protein FlgC [Acetivibrio cellulolyticus
           CD2]
          Length = 146

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 55/144 (38%), Positives = 73/144 (50%), Gaps = 16/144 (11%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------ 58
            +S  I  SGL  Q  RM  IS+NIANA TT  T     YRRK + FEE    +      
Sbjct: 4   FSSLDIGASGLTAQRLRMDTISQNIANANTTR-TENGTAYRRKVVVFEEKSSDTPFSEYL 62

Query: 59  ---------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                    GGVRV +I  D S   + +DPGHP A+ +G V+ PNV++L E  +M    R
Sbjct: 63  NESSKKMVGGGVRVARITEDTSALKKIYDPGHPDADENGYVEMPNVDILTEMVNMISATR 122

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+ +I  +  M    L++ R
Sbjct: 123 SYEANVTSINTTKSMAMKALEIGR 146


>gi|297617136|ref|YP_003702295.1| flagellar basal-body rod protein FlgC [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144973|gb|ADI01730.1| flagellar basal-body rod protein FlgC [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 145

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 55/144 (38%), Positives = 73/144 (50%), Gaps = 15/144 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
            + +  I+ SG+  Q  RM +IS N+AN  TT  TP   PYRR+ + FE           
Sbjct: 3   FLNAFDISASGMTAQRLRMDVISNNLANVNTTR-TPQGGPYRRQMVIFEARTPSKGNFKD 61

Query: 55  -----MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                M G GGVRVK I  D S F   +DPG+P A+  G V  PNVNV+ E  DM    R
Sbjct: 62  LLSAYMEGEGGVRVKAIREDTSPFKRVYDPGNPDADQDGYVNMPNVNVVSEMVDMISATR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  ++ +  M    L++ R
Sbjct: 122 AYEANVSAVEATKSMAMKALEIGR 145


>gi|261344144|ref|ZP_05971788.1| flagellar basal-body rod protein FlgC [Providencia rustigianii DSM
           4541]
 gi|282567736|gb|EFB73271.1| flagellar basal-body rod protein FlgC [Providencia rustigianii DSM
           4541]
          Length = 134

 Score =  197 bits (501), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L++   I+ S L  QS R+ + + N+ANA +    P   PYR K + F+    G    GG
Sbjct: 3   LLSIFDISASALTAQSQRLNVSASNMANAESVAG-PDGQPYRAKQVVFQMAPQGRHQVGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D S    E+ PGHP+A+  G V+ PNV+ + E  +    +R Y ANL+ +  
Sbjct: 62  VRVSELIEDPSPPRMEYKPGHPLADEKGYVQMPNVDTVGEMINTISASRSYQANLEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL L +
Sbjct: 122 AKTLLQKTLTLGQ 134


>gi|296133051|ref|YP_003640298.1| flagellar basal-body rod protein FlgC [Thermincola sp. JR]
 gi|296031629|gb|ADG82397.1| flagellar basal-body rod protein FlgC [Thermincola potens JR]
          Length = 145

 Score =  196 bits (500), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 56/144 (38%), Positives = 73/144 (50%), Gaps = 15/144 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           +  S  I+ SGL  Q  RM +ISENIAN  TT    G  PYRRK   FE           
Sbjct: 3   MFDSFDISASGLTAQRLRMDLISENIANVNTTRTASGG-PYRRKLAVFEAKNGDFDKVFQ 61

Query: 54  ----VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                +    GVRV KI  DQS     ++P HP ANA G V+ PNVN++ E  DM    R
Sbjct: 62  ERLDSVSPGKGVRVTKIIEDQSPLKLVYNPNHPDANAQGYVEMPNVNIVTEMVDMISATR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+ +I+ + +M    +++ R
Sbjct: 122 AYEANVASIRATKEMFAKAMEIGR 145


>gi|251789166|ref|YP_003003887.1| flagellar basal body rod protein FlgC [Dickeya zeae Ech1591]
 gi|271500064|ref|YP_003333089.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech586]
 gi|307131611|ref|YP_003883627.1| flagellar basal-body rod protein flgC [Dickeya dadantii 3937]
 gi|247537787|gb|ACT06408.1| flagellar basal-body rod protein FlgC [Dickeya zeae Ech1591]
 gi|270343619|gb|ACZ76384.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech586]
 gi|306529140|gb|ADM99070.1| Flagellar basal-body rod protein flgC [Dickeya dadantii 3937]
          Length = 134

 Score =  196 bits (499), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    I+ S L+ QS R+ + + N+ANA +    P   PYR K + FE        +GG
Sbjct: 3   LLNIFDISGSALSAQSQRLNVSASNLANADSV-TGPDGQPYRAKQVVFEVDAAPGQATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V K+  D S     + PG+P+A+A G V+ PNV+ + E  +    +R Y AN++ +  
Sbjct: 62  VKVAKVVEDPSPEKLVYQPGNPLADAKGYVRMPNVDPVNEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  MM  TL + +
Sbjct: 122 TKSMMLKTLTIGQ 134


>gi|226327748|ref|ZP_03803266.1| hypothetical protein PROPEN_01621 [Proteus penneri ATCC 35198]
 gi|225203452|gb|EEG85806.1| hypothetical protein PROPEN_01621 [Proteus penneri ATCC 35198]
          Length = 134

 Score =  195 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L +   I+ S L+ QS R+ + + N+ANA +    P  +PYR K + F+         GG
Sbjct: 3   LFSIFDISGSALSAQSQRLNVSASNMANADSVAG-PDGEPYRAKQVVFQVNAPAGQEVGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D + F  E+ PGHP A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVTEVVDDPAPFRMEYQPGHPFADEKGYVRMPNVDVVGEMINTISASRSYQANVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL + +
Sbjct: 122 AKSLMQKTLMIGQ 134


>gi|217077497|ref|YP_002335215.1| flagellar basal-body rod protein FlgC [Thermosipho africanus
           TCF52B]
 gi|217037352|gb|ACJ75874.1| flagellar basal-body rod protein FlgC [Thermosipho africanus
           TCF52B]
          Length = 137

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 7/135 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------S 58
                I+ +G++ Q  R+ +IS N+AN+ TT  T   +PYRRK   F+E++        +
Sbjct: 4   FNIMTISATGMSAQRLRIDVISNNLANSETTR-TENGEPYRRKVPVFQELLRNINGRLEN 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGV VKKI  D+S F   +DP HP A+ +G VK PNVNV+ E  DM    R Y AN+   
Sbjct: 63  GGVVVKKIYEDKSPFRIVYDPTHPDADENGYVKLPNVNVVREMVDMINAQRAYEANVTAF 122

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+ + L + R
Sbjct: 123 NTTKAMINSALQIGR 137


>gi|220932527|ref|YP_002509435.1| flagellar basal-body rod protein FlgC [Halothermothrix orenii H
           168]
 gi|219993837|gb|ACL70440.1| flagellar basal-body rod protein FlgC [Halothermothrix orenii H
           168]
          Length = 145

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 53/145 (36%), Positives = 69/145 (47%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           ++ S +I+ SGL  Q  RM II++NIAN  TT  T    PYRRK   F E    S     
Sbjct: 1   MLDSLNISASGLTAQRLRMDIIADNIANVNTTR-TEDGGPYRRKLPVFREREADSFARVF 59

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GV V  I  D S F   ++PGHP AN  G V  PNVN+  E  DM   +
Sbjct: 60  QSKLGKDTDRRGVEVVGIREDDSPFKMVYNPGHPDANEEGYVAMPNVNITTEMVDMISAS 119

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  +  + +M    L + +
Sbjct: 120 RAYEANVTALNTAKNMALKALQIGQ 144


>gi|157362949|ref|YP_001469716.1| flagellar basal-body rod protein FlgC [Thermotoga lettingae TMO]
 gi|157313553|gb|ABV32652.1| flagellar basal-body rod protein FlgC [Thermotoga lettingae TMO]
          Length = 137

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 7/138 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M+  +   +++ SG+  Q  R+ IIS NIAN+ TT  T    PYRR+   F E +     
Sbjct: 1   MNEFL-IMNVSASGMTAQRLRVDIISSNIANSETTR-TDRGTPYRRRVPVFSEYLISDGK 58

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             S GV+V +I  D S F   +DP HP A+ +G V  PNVNVL E  D+    R Y AN+
Sbjct: 59  SASTGVKVVRIEEDPSPFRLVYDPSHPDADENGYVSLPNVNVLREMVDLISAQRSYEANI 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
                +  M+ + L + R
Sbjct: 119 SAFNTTKSMINSALQIGR 136


>gi|146296278|ref|YP_001180049.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409854|gb|ABP66858.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 146

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + +I+ S L  Q  RM +I++NIANA TT  T    PYRRK + FEE     G    
Sbjct: 3   MFDAINISASALHAQRVRMDVIAQNIANANTTR-TEDGTPYRRKIVVFEERKQSFGDILN 61

Query: 60  -----------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GVRVK I  D S F + +DP HP ++ +G V YPNV+++ E  +M E +
Sbjct: 62  EKLNASSDTYAGVRVKAIIEDTSPFKKVYDPTHPDSDQNGYVNYPNVDIVTEMVNMIEAS 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  +  +  M+T   ++ +
Sbjct: 122 RAYEANVTAMNITKSMITRIFEIGK 146


>gi|206890290|ref|YP_002248113.1| flagellar basal-body rod protein FlgC [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742228|gb|ACI21285.1| flagellar basal-body rod protein FlgC [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 135

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 3/135 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--S 58
           M  +     ++ +GL  Q  R+ +I+ N+AN  +T  TP   PYRRK + F   M+   S
Sbjct: 1   MKDIFLPLKVSATGLEAQKIRLNVIASNLANINST-KTPEGGPYRRKDVLFTTYMYDQIS 59

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV V++I  DQ  F   ++P HP A+ +G VKYPNVN + E  ++   +R Y ANL  I
Sbjct: 60  QGVDVQRIVEDQRPFRIVYEPSHPDADKNGYVKYPNVNPMEEMINLISASRAYEANLTMI 119

Query: 119 KQSHDMMTTTLDLLR 133
               DM   TLDLL+
Sbjct: 120 NSYKDMFMRTLDLLK 134


>gi|188586015|ref|YP_001917560.1| flagellar basal-body rod protein FlgC [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350702|gb|ACB84972.1| flagellar basal-body rod protein FlgC [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 146

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 71/147 (48%), Gaps = 18/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           +  +  I+ SGL  +  RM +IS NIANA TT  T   +PYRR+   FE           
Sbjct: 1   MFDTFDISGSGLTAERLRMDVISNNIANANTTR-TEDGEPYRRQMPVFETRGKSFSDHLH 59

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVANAS-GIVKYPNVNVLVETADMRE 106
                     S GVRV  I  D S F E +DP HP A+   G V+ PNV ++ E  DM  
Sbjct: 60  SFLQKDGDFDSQGVRVSSIEEDDSPFKEIYDPEHPEADPETGYVQKPNVEIVKEMTDMIT 119

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN   I  +  M + TLD+ R
Sbjct: 120 ASRAYEANATAIDNAKSMASNTLDIGR 146


>gi|332799171|ref|YP_004460670.1| flagellar basal-body rod protein FlgC [Tepidanaerobacter sp. Re1]
 gi|332696906|gb|AEE91363.1| flagellar basal-body rod protein FlgC [Tepidanaerobacter sp. Re1]
          Length = 143

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 51/141 (36%), Positives = 69/141 (48%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
              S  I+ SGL  Q  R+  IS NIANA TT    G  P++R+ + F+E          
Sbjct: 3   FFNSLDISASGLTAQRLRLDTISNNIANANTTRTEEGG-PFQRERVVFQERNTTGSFSNY 61

Query: 55  --MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GVRV  I  D + F   +DP HP A+ SG V  PNVN++ E  DM    R Y 
Sbjct: 62  LDQQKPAGVRVVAIEKDTAPFKALYDPTHPDADPSGYVMLPNVNIVTEMVDMISATRSYE 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN+  I  +  MM+  L++ +
Sbjct: 122 ANVTAINSAKSMMSKALEISK 142


>gi|225181613|ref|ZP_03735054.1| flagellar basal-body rod protein FlgC [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167721|gb|EEG76531.1| flagellar basal-body rod protein FlgC [Dethiobacter alkaliphilus
           AHT 1]
          Length = 136

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 5/134 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----G 59
           +  + ++++SGL  +  R+ +I+ NIANA TT  T    PY+RK+  F EVM G+     
Sbjct: 3   IFKAMNVSSSGLTAERFRLDLIANNIANAHTTR-TEDGGPYQRKSAVFAEVMDGARKSGQ 61

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV+ + VD +     ++P HP AN  G V YPNVN++ E  DM    R Y AN+  + 
Sbjct: 62  GVRVQGVSVDNTEPRLVYEPEHPDANEEGYVAYPNVNIVQEMVDMITATRAYEANVTALN 121

Query: 120 QSHDMMTTTLDLLR 133
            S +M    L++ R
Sbjct: 122 ASKNMFLKALEIGR 135


>gi|212709490|ref|ZP_03317618.1| hypothetical protein PROVALCAL_00532 [Providencia alcalifaciens DSM
           30120]
 gi|212687828|gb|EEB47356.1| hypothetical protein PROVALCAL_00532 [Providencia alcalifaciens DSM
           30120]
          Length = 134

 Score =  193 bits (493), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L++   I++S L  QS R+ + + N+ANA +    P  +PYR K + F+    G    GG
Sbjct: 3   LLSIFDISSSALTAQSQRLNVSASNMANAESVVG-PDGEPYRAKQVVFQMAPQGRNQVGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +    E+ PGHP+A+  G VK PNV+ + E  +    +R Y ANL+ +  
Sbjct: 62  VRVSELIDDPAPPRMEYKPGHPLADEKGYVKMPNVDTVGEMINTISASRSYQANLEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL L +
Sbjct: 122 AKTLLQKTLTLGQ 134


>gi|33596138|ref|NP_883781.1| flagellar basal body rod protein FlgC [Bordetella parapertussis
           12822]
 gi|33601539|ref|NP_889099.1| flagellar basal body rod protein FlgC [Bordetella bronchiseptica
           RB50]
 gi|33573141|emb|CAE36788.1| flagellar basal-body rod protein FlgC [Bordetella parapertussis]
 gi|33575975|emb|CAE33054.1| flagellar basal-body rod protein FlgC [Bordetella bronchiseptica
           RB50]
          Length = 139

 Score =  193 bits (493), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------EVMH 56
           L++   IA S L+ QS RM + + N+ANA +    P   PYR + + F+           
Sbjct: 3   LLSIFEIAGSALSAQSQRMNVSASNMANADSVAG-PDGQPYRARQVVFQVNPPPGQAFGQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GGVRV  +  DQS F + +DP HP+A+A G V  PNV+ + ET +M   +R Y AN++
Sbjct: 62  EIGGVRVAGVVEDQSPFKKIYDPKHPMADAQGYVNMPNVDPVAETVNMIAASRSYQANVE 121

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  +M  TL + +
Sbjct: 122 VLNTAKQLMLKTLTIGQ 138


>gi|268589984|ref|ZP_06124205.1| flagellar basal-body rod protein FlgC [Providencia rettgeri DSM
           1131]
 gi|291314702|gb|EFE55155.1| flagellar basal-body rod protein FlgC [Providencia rettgeri DSM
           1131]
          Length = 134

 Score =  193 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L++   I+ S L  QS R+ + + N+ANA +    P   PYR K + F+    G    GG
Sbjct: 3   LLSIFDISASALTAQSQRLNVSASNMANAESIAG-PDGQPYRAKQVVFQMAPQGRHEVGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +    E+ PGHP A+  G V+ PNV+++ E  +    +R Y ANL+ +  
Sbjct: 62  VRVSELIEDPTPPRMEYKPGHPSADEKGYVQMPNVDMVGEMINTISASRSYQANLEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 AKTLLQKTLTIGQ 134


>gi|297530608|ref|YP_003671883.1| flagellar basal-body rod protein FlgC [Geobacillus sp. C56-T3]
 gi|297253860|gb|ADI27306.1| flagellar basal-body rod protein FlgC [Geobacillus sp. C56-T3]
          Length = 150

 Score =  193 bits (492), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 71/148 (47%), Gaps = 18/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTIS-------FEE 53
           L  S +I+ S L  Q  RM +I+ NIAN  TT         +PYRRK +        F  
Sbjct: 3   LFQSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPQSGSFSG 62

Query: 54  VMHGS--------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +  +        GGVRV++I  D + F   +DP HP A A G V+ PNV+ L E  D+ 
Sbjct: 63  YLQAALGRADAVDGGVRVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEMVDLI 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+  +  S  M+   L++ +
Sbjct: 123 GATRSYEANVTVLNASKGMLMKALEIGK 150


>gi|183598615|ref|ZP_02960108.1| hypothetical protein PROSTU_02015 [Providencia stuartii ATCC 25827]
 gi|188020794|gb|EDU58834.1| hypothetical protein PROSTU_02015 [Providencia stuartii ATCC 25827]
          Length = 134

 Score =  193 bits (492), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 75/133 (56%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L++   I+ S L  QS R+ + + N+ANA +    P  +P+R K + F+   +  +G GG
Sbjct: 3   LLSIFDISASALTAQSQRLNVSASNMANAESVVG-PDGEPFRAKQVVFQMTPQGRNGVGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +    E+ PGHP+A+  G V+ PNV+++ E  +    +R Y ANL+ +  
Sbjct: 62  VRVSQLIEDPTPPRMEYKPGHPLADEKGYVRMPNVDMVGEMINTISASRSYQANLEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 AKTLLQKTLTIGQ 134


>gi|227112519|ref|ZP_03826175.1| flagellar basal body rod protein FlgC [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
 gi|227328336|ref|ZP_03832360.1| flagellar basal body rod protein FlgC [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 134

 Score =  193 bits (492), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    I+ S L+ QS R+ + + N+ANA +    P  +PYR K + FE        +GG
Sbjct: 3   LLNIFEISGSALSAQSQRLNVSASNLANADSV-TGPDGEPYRAKQVVFEVNAAPGQSTGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  +  D S     ++PG+P+A+  G V+ PNV+ + E  +    +R Y AN++ +  
Sbjct: 62  VRVSNVIEDPSPARLVYEPGNPLADGQGYVRMPNVDPVAEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  MM  TL + +
Sbjct: 122 TKSMMLKTLTIGQ 134


>gi|56419752|ref|YP_147070.1| flagellar basal body rod protein FlgC [Geobacillus kaustophilus
           HTA426]
 gi|56379594|dbj|BAD75502.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426]
          Length = 150

 Score =  193 bits (492), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 71/148 (47%), Gaps = 18/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTIS-------FEE 53
           L  S +I+ S L  Q  RM +I+ NIAN  TT         +PYRRK +        F  
Sbjct: 3   LFQSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPRSGSFSG 62

Query: 54  VMHGS--------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +  +        GGVRV++I  D + F   +DP HP A A G V+ PNV+ L E  D+ 
Sbjct: 63  YLQAALGRADAVDGGVRVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEMVDLI 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+  +  S  M+   L++ +
Sbjct: 123 GATRSYEANVTVLNASKGMLMKALEIGK 150


>gi|33592477|ref|NP_880121.1| flagellar basal body rod protein FlgC [Bordetella pertussis Tohama
           I]
 gi|33572123|emb|CAE41665.1| flagellar basal-body rod protein FlgC [Bordetella pertussis Tohama
           I]
 gi|332381894|gb|AEE66741.1| flagellar basal body rod protein FlgC [Bordetella pertussis CS]
          Length = 139

 Score =  193 bits (491), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------EVMH 56
           L++   IA S L+ QS RM + + N+ANA +    P   PYR + + F+           
Sbjct: 3   LLSIFEIAGSALSAQSQRMNVSASNMANADSVAG-PDGQPYRARQVVFQVNPPAGQAFGQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GGVRV  +  DQS F + +DP HP+A+A G V  PNV+ + ET +M   +R Y AN++
Sbjct: 62  EIGGVRVAGVVEDQSPFKKIYDPKHPMADAQGYVNMPNVDPVAETVNMIAASRSYQANVE 121

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  +M  TL + +
Sbjct: 122 VLNTAKQLMLKTLTIGQ 138


>gi|150021011|ref|YP_001306365.1| flagellar basal-body rod protein FlgC [Thermosipho melanesiensis
           BI429]
 gi|149793532|gb|ABR30980.1| flagellar basal-body rod protein FlgC [Thermosipho melanesiensis
           BI429]
          Length = 137

 Score =  193 bits (491), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 7/135 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------S 58
                IA +G++ Q  R+ +I+ N+AN+ TT  T   +PYRRK   F+E++        +
Sbjct: 4   FNIMTIAATGMSAQRLRIDVITNNLANSETTR-TEKGEPYRRKVPVFQELLRNVRGRLEN 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGV VK+I  DQS F   +DP HP A+ +G VK PNVNV+ E  DM    R Y AN+   
Sbjct: 63  GGVVVKEIYEDQSPFRVVYDPTHPDADENGYVKLPNVNVVREMVDMINAQRAYEANVTAF 122

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+ + L + R
Sbjct: 123 NTTKAMINSALQIGR 137


>gi|261419417|ref|YP_003253099.1| flagellar basal body rod protein FlgC [Geobacillus sp. Y412MC61]
 gi|319766232|ref|YP_004131733.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC52]
 gi|261375874|gb|ACX78617.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC61]
 gi|317111098|gb|ADU93590.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC52]
          Length = 150

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 71/148 (47%), Gaps = 18/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTIS-------FEE 53
           L  S +I+ S L  Q  RM +I+ NIAN  TT         +PYRRK +        F  
Sbjct: 3   LFQSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPQSGSFSG 62

Query: 54  VMHGS--------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +  +        GGV+V++I  D + F   +DP HP A A G V+ PNV+ L E  D+ 
Sbjct: 63  YLQAALGRADAVDGGVQVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEMVDLI 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+  +  S  M+   L++ +
Sbjct: 123 GATRSYEANVTVLNASKGMLMKALEIGK 150


>gi|163744319|ref|ZP_02151679.1| flagellar basal body rod protein [Oceanibulbus indolifex HEL-45]
 gi|161381137|gb|EDQ05546.1| flagellar basal body rod protein [Oceanibulbus indolifex HEL-45]
          Length = 136

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 67/136 (49%), Positives = 94/136 (69%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L + A IA SG+  Q+AR+++ISEN+ANA +TG TPG+DP+RRKTISF E++  +GG
Sbjct: 1   MDPLQSIAKIAASGMTAQTARLRVISENVANADSTGTTPGADPFRRKTISFSELIDRNGG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V +IG DQS F  ++DP HP A+ +G V  PNV+ ++E A+MRE +R Y AN+  
Sbjct: 61  GSLVEVDRIGRDQSPFRRDYDPAHPAADETGYVNRPNVDPIIEMANMREASRNYEANMNM 120

Query: 118 IKQSHDMMTTTLDLLR 133
            +    M +  LDLL+
Sbjct: 121 FESGRRMRSQMLDLLK 136


>gi|253688974|ref|YP_003018164.1| flagellar basal-body rod protein FlgC [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755552|gb|ACT13628.1| flagellar basal-body rod protein FlgC [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 134

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    I+ S L+ QS R+ + + N+ANA +    P  +PYR K + FE        +GG
Sbjct: 3   LLNIFEISGSALSAQSQRLNVSASNLANADSV-TGPDGEPYRAKQVVFEVNAAPGQSTGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  +  D S     ++PG+P+A+  G V+ PNV+ + E  +    +R Y AN++ +  
Sbjct: 62  VRVANVIEDPSPARLVYEPGNPLADGQGYVRMPNVDPVAEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  MM  TL + +
Sbjct: 122 TKSMMLKTLTIGQ 134


>gi|315121849|ref|YP_004062338.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495251|gb|ADR51850.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 134

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 114/134 (85%), Positives = 122/134 (91%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MDYL+AS+ IANSGL VQS+RM +ISENIANARTTG+T GSDPYRRKTISFEEVMH  GG
Sbjct: 1   MDYLVASSQIANSGLTVQSSRMHVISENIANARTTGNTAGSDPYRRKTISFEEVMHEGGG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRVKK+ VD+S FVEEFDP HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ IKQ
Sbjct: 61  VRVKKVSVDKSPFVEEFDPSHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQIIKQ 120

Query: 121 SHDMMTTTLDLLRD 134
           S DM+ TTLDLLRD
Sbjct: 121 SRDMIATTLDLLRD 134


>gi|50120637|ref|YP_049804.1| flagellar basal body rod protein FlgC [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611163|emb|CAG74609.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 134

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    I+ S L+ QS R+ + + N+ANA +    P   PYR K + FE        +GG
Sbjct: 3   LLNIFEISGSALSAQSQRLNVSASNLANADSV-TGPDGQPYRAKQVVFEVNAAPGQSTGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  +  D S     ++PG+P+A+  G V+ PNV+ + E  +    +R Y AN++ +  
Sbjct: 62  VRVANVIEDPSPARLVYEPGNPLADGQGYVRMPNVDPVAEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  MM  TL + +
Sbjct: 122 TKSMMLKTLTIGQ 134


>gi|90422608|ref|YP_530978.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
 gi|90104622|gb|ABD86659.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
          Length = 139

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 75/136 (55%), Positives = 101/136 (74%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS  IA+SGL  QS R++++SEN+ANA +TG +PG++PY+RKT +F   M  + G
Sbjct: 2   IDPLQASVQIASSGLEAQSTRLRVVSENLANANSTGRSPGAEPYQRKTTTFTAEMDRAAG 61

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   +VK IGVD++ F  ++ PGHP A+ SG VK PNVN+L+E ADMRETNR Y ANLQ 
Sbjct: 62  VPVVKVKDIGVDRAPFRLDYQPGHPAADQSGYVKLPNVNMLIEMADMRETNRTYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  M++ T+DLLR
Sbjct: 122 IKQTRSMVSMTIDLLR 137


>gi|328545507|ref|YP_004305616.1| flagellar basal-body rod protein FlgC [polymorphum gilvum
           SL003B-26A1]
 gi|326415248|gb|ADZ72311.1| Flagellar basal-body rod protein FlgC [Polymorphum gilvum
           SL003B-26A1]
          Length = 138

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/136 (52%), Positives = 96/136 (70%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L A+  I+ SGL  QS R++++SEN+ANA++TG T G+DPY RKTI+FE        +
Sbjct: 3   DPLAATLKISASGLQAQSERLRVVSENLANAQSTGKTKGADPYARKTITFESEFDRATAA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+VK IG D++ F  E+DPGHP A+  G VK PNVN+LVE ADMRETNR Y ANL+ +
Sbjct: 63  SMVKVKDIGKDKAPFTIEYDPGHPAADDDGYVKLPNVNLLVEMADMRETNRSYEANLKMM 122

Query: 119 KQSHDMMTTTLDLLRD 134
            Q+  M+  T+DLL+D
Sbjct: 123 TQARTMVMRTIDLLKD 138


>gi|306846280|ref|ZP_07478841.1| flagellar basal-body rod protein FlgC [Brucella sp. BO1]
 gi|306273275|gb|EFM55144.1| flagellar basal-body rod protein FlgC [Brucella sp. BO1]
          Length = 140

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/135 (54%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L ++  IA SGL+ QS R++IISENIANA++T  T  +DPYRRKT+SF   +    G+
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIISENIANAQSTARTADADPYRRKTVSFRTELEQGTGA 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|22126392|ref|NP_669815.1| flagellar basal body rod protein FlgC [Yersinia pestis KIM 10]
 gi|45441411|ref|NP_992950.1| flagellar basal body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51596009|ref|YP_070200.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 32953]
 gi|108807171|ref|YP_651087.1| flagellar basal body rod protein FlgC [Yersinia pestis Antiqua]
 gi|108812485|ref|YP_648252.1| flagellar basal body rod protein FlgC [Yersinia pestis Nepal516]
 gi|145598612|ref|YP_001162688.1| flagellar basal body rod protein FlgC [Yersinia pestis Pestoides F]
 gi|149366253|ref|ZP_01888288.1| flagellar basal-body rod protein FlgC [Yersinia pestis CA88-4125]
 gi|153947032|ref|YP_001401292.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
 gi|162420507|ref|YP_001606471.1| flagellar basal body rod protein FlgC [Yersinia pestis Angola]
 gi|165926046|ref|ZP_02221878.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938792|ref|ZP_02227347.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010857|ref|ZP_02231755.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166211044|ref|ZP_02237079.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401147|ref|ZP_02306650.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167420240|ref|ZP_02311993.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425758|ref|ZP_02317511.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167469718|ref|ZP_02334422.1| flagellar basal-body rod protein FlgC [Yersinia pestis FV-1]
 gi|170024649|ref|YP_001721154.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186895112|ref|YP_001872224.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|218928920|ref|YP_002346795.1| flagellar basal body rod protein FlgC [Yersinia pestis CO92]
 gi|229896240|ref|ZP_04511410.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides A]
 gi|229897175|ref|ZP_04512331.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229897901|ref|ZP_04513052.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902867|ref|ZP_04517984.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
 gi|270486647|ref|ZP_06203721.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294504032|ref|YP_003568094.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|21959379|gb|AAM86066.1|AE013854_2 cell-proximal portion of basal-body rod protein [Yersinia pestis
           KIM 10]
 gi|45436272|gb|AAS61827.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51589291|emb|CAH20912.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           IP 32953]
 gi|108776133|gb|ABG18652.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
 gi|108779084|gb|ABG13142.1| flagellar basal-body rod protein FlgC [Yersinia pestis Antiqua]
 gi|115347531|emb|CAL20440.1| flagellar basal-body rod protein FlgC [Yersinia pestis CO92]
 gi|145210308|gb|ABP39715.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides F]
 gi|149292666|gb|EDM42740.1| flagellar basal-body rod protein FlgC [Yersinia pestis CA88-4125]
 gi|152958527|gb|ABS45988.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
 gi|162353322|gb|ABX87270.1| flagellar basal-body rod protein FlgC [Yersinia pestis Angola]
 gi|165913406|gb|EDR32028.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922250|gb|EDR39427.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990201|gb|EDR42502.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166208224|gb|EDR52704.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961935|gb|EDR57956.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049536|gb|EDR60944.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055157|gb|EDR64954.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751183|gb|ACA68701.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186698138|gb|ACC88767.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|229680314|gb|EEO76413.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
 gi|229688942|gb|EEO81007.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693512|gb|EEO83561.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701163|gb|EEO89192.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides A]
 gi|262361782|gb|ACY58503.1| flagellar basal body rod protein [Yersinia pestis D106004]
 gi|262366082|gb|ACY62639.1| flagellar basal body rod protein [Yersinia pestis D182038]
 gi|270335151|gb|EFA45928.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294354491|gb|ADE64832.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|320015469|gb|ADV99040.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 134

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           L+    IA S L+ QS RM + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALSAQSQRMNVSASNLANADSV-TGPDGQPYRAKQVVFQVAAQPGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV +I  D S     + PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  
Sbjct: 62  VRVAQIVDDPSPDRLVYQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMLKTLTLGQ 134


>gi|238028851|ref|YP_002913082.1| flagellar basal body rod protein FlgC [Burkholderia glumae BGR1]
 gi|237878045|gb|ACR30378.1| Flagellar basal-body rod protein FlgC [Burkholderia glumae BGR1]
          Length = 141

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S ++ +S R+ + + N+ANA +    P   PYR K + FE        
Sbjct: 1   MPSLMNIFDVAGSAMSAESQRLNVTASNLANADSV-TGPDGKPYRAKQVVFETQPLGGAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGV+VK++  D S     +DP +P A+A+G V  PNV+ + E  +M   +R Y
Sbjct: 60  TRSGQGVGGVQVKQVIDDPSPMKTSYDPSNPTADANGYVTLPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKQLMLKTLTIG 140


>gi|300722684|ref|YP_003711974.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629191|emb|CBJ89787.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus nematophila ATCC 19061]
          Length = 134

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHGSGG 60
           L++   IA+S L+ QS R+ + + N+ANA +    P  +PYR K + F          GG
Sbjct: 3   LLSIFDIASSALSAQSQRLNVSASNMANADSVVG-PDGEPYRAKQVVFRVAAPAGQEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D + F  E+ PG+P+A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVSEVVDDPTPFRLEYKPGNPLADEKGYVRMPNVDVVGEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSIMLKTLTLGQ 134


>gi|51246506|ref|YP_066390.1| flagellar basal body rod protein (FlgC) [Desulfotalea psychrophila
           LSv54]
 gi|50877543|emb|CAG37383.1| probable flagellar basal body rod protein (FlgC) [Desulfotalea
           psychrophila LSv54]
          Length = 143

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 14/145 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-------SFEE 53
           MD ++ S  I++S L  QS R+  IS NIANA TT  TP   PY++K++       +F E
Sbjct: 1   MD-ILNSFKISSSALKAQSIRLDTISSNIANAETT-STPEGGPYKKKSVYFQAKPLTFAE 58

Query: 54  VMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            ++GS      GV V  I  D+S   + +DP HP A   G V  PNV+ L E  DM    
Sbjct: 59  QLNGSLNAKTTGVEVINIIEDKSEPRKVYDPSHPDAGKDGYVDMPNVDTLKEMVDMMSAT 118

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  I+ +  M    L++ R
Sbjct: 119 RSYQANVTAIQSAKRMALKALEIGR 143


>gi|138894738|ref|YP_001125191.1| flagellar basal body rod protein FlgC [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247641|ref|ZP_03146343.1| flagellar basal-body rod protein FlgC [Geobacillus sp. G11MC16]
 gi|134266251|gb|ABO66446.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196212425|gb|EDY07182.1| flagellar basal-body rod protein FlgC [Geobacillus sp. G11MC16]
          Length = 150

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 18/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTIS-------FEE 53
           +  S +I+ S L  Q  RM +IS NIAN  TT         +PYRRK +        F  
Sbjct: 3   MFQSLNISASALTAQRLRMDVISSNIANVDTTRARLVNGEWEPYRRKVVVVEPRGEQFSS 62

Query: 54  VMHGS--------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +  +         GVRV++I  D + F   +DP HP A   G V+ PNV+ L E  D+ 
Sbjct: 63  YLQAALGRTDAVGSGVRVREIVDDPAPFKLLYDPDHPDAGDDGYVRLPNVDPLKEMVDLI 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+  +  S  M+   L++ +
Sbjct: 123 GATRSYEANVTALNASKGMLMKALEIGK 150


>gi|261821151|ref|YP_003259257.1| flagellar basal body rod protein FlgC [Pectobacterium wasabiae
           WPP163]
 gi|261605164|gb|ACX87650.1| flagellar basal-body rod protein FlgC [Pectobacterium wasabiae
           WPP163]
          Length = 134

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    I+ S L+ QS R+ + + N+ANA +    P  +PYR K + FE        +GG
Sbjct: 3   LLNIFEISGSALSAQSQRLNVSASNLANADSV-TGPDGEPYRAKQVVFEVNAAPGQSTGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  +  D S     ++PG+P+A+  G V+ PNV+ + E  +    +R Y AN++ +  
Sbjct: 62  VRVANVIEDPSPARLVYEPGNPLADGQGYVRMPNVDPVAEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  MM  TL + +
Sbjct: 122 TKSMMMKTLTIGQ 134


>gi|326791545|ref|YP_004309366.1| flagellar basal-body rod protein FlgC [Clostridium lentocellum DSM
           5427]
 gi|326542309|gb|ADZ84168.1| flagellar basal-body rod protein FlgC [Clostridium lentocellum DSM
           5427]
          Length = 145

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 52/144 (36%), Positives = 73/144 (50%), Gaps = 15/144 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
              S  IA SGL  Q  R+ IIS+N+AN  TT    G  PY+RKT+ FE++ +       
Sbjct: 3   FFDSMDIAASGLTAQRLRLDIISQNMANVNTTRTAEGG-PYKRKTVIFEQMQNENSFSSI 61

Query: 57  -------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                  G  GVRV +I  D+S     ++P HP ANA G V+ PNVN + E  +M   +R
Sbjct: 62  LNKKKQSGVNGVRVARIVEDESQGALVYNPTHPDANAQGYVEMPNVNTVDEMVNMISASR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+ +      M    L++ +
Sbjct: 122 SYEANVTSFNTMKSMFAKALEIGK 145


>gi|222147569|ref|YP_002548526.1| flagellar basal body rod protein FlgC [Agrobacterium vitis S4]
 gi|221734557|gb|ACM35520.1| flagellar basal-body rod protein [Agrobacterium vitis S4]
          Length = 145

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 81/135 (60%), Positives = 106/135 (78%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
           D L ++  IA SGL VQS R++I+SENIANA++TGDTPG++PYRRKTI+F   M  + G 
Sbjct: 8   DPLTSALKIAGSGLDVQSTRLRIVSENIANAQSTGDTPGANPYRRKTITFGSEMDRATGT 67

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+VKK+G D+S F EE+DP +P A+A G VK PNVNVL+E ADMRE NR Y ANLQ++
Sbjct: 68  EIVKVKKLGFDKSNFTEEYDPSNPAADAKGYVKMPNVNVLIEMADMREANRTYEANLQSV 127

Query: 119 KQSHDMMTTTLDLLR 133
           KQ+ D++T+TLDLL+
Sbjct: 128 KQTRDLITSTLDLLK 142


>gi|226944490|ref|YP_002799563.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
 gi|226719417|gb|ACO78588.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
          Length = 135

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 4/132 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           +     IA S L+ QS RM + + N+AN  + G       YR K + FE +  G   +GG
Sbjct: 3   MFNIFDIAGSALSAQSQRMNVTASNLANVDSVGS-EDGQAYRAKQVLFESMARGRSDTGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D S   +E+ P HP+AN  G V  PNV  + E  +M   +R Y AN++ +  
Sbjct: 62  VRVVQVVEDPSPLRQEYRPEHPLANEEGYVSLPNVEPVHEMVNMIAASRSYQANVEVMNT 121

Query: 121 SHDMMTTTLDLL 132
           S  M+  TL L 
Sbjct: 122 SKQMLLKTLTLG 133


>gi|238755326|ref|ZP_04616669.1| Flagellar basal-body rod protein flgC [Yersinia ruckeri ATCC 29473]
 gi|238706462|gb|EEP98836.1| Flagellar basal-body rod protein flgC [Yersinia ruckeri ATCC 29473]
 gi|253317693|gb|ACT22782.1| flagellar basal body rod protein FlgC [Yersinia ruckeri]
          Length = 134

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L+    IA S L+ QS RM + + N+ANA +    P   PYR K + F+    G+   GG
Sbjct: 3   LLNIFDIAGSALSAQSQRMNVSASNMANADSV-TGPDGQPYRAKQVVFQVANQGAQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV +I  D S     F PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVAQIVEDTSPDRLVFQPGNPLADAKGYVRMPNVDVVGEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  MM  TL L +
Sbjct: 122 TKSMMLKTLTLGQ 134


>gi|293605001|ref|ZP_06687397.1| flagellar basal-body rod protein FlgC [Achromobacter piechaudii
           ATCC 43553]
 gi|292816606|gb|EFF75691.1| flagellar basal-body rod protein FlgC [Achromobacter piechaudii
           ATCC 43553]
          Length = 139

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------EVMH 56
           L++   IA S L+ QS RM + + N+ANA +    P   PYR + + F+        +  
Sbjct: 3   LLSIFDIAGSALSAQSQRMNVTASNLANADSVVG-PDGQPYRARQVVFQVNPAAGQAMGQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GGVRV  +  D S   + +DP HP+A+A G +  PNV+ + ET +M   +R Y AN++
Sbjct: 62  EIGGVRVAGVIQDPSPLKQIYDPKHPLADAQGYISMPNVDPVAETVNMIAASRSYQANVE 121

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  +M  TL + +
Sbjct: 122 VLNTAKSLMQKTLTIGQ 138


>gi|15887900|ref|NP_353581.1| flagellar basal body rod protein FlgC [Agrobacterium tumefaciens
           str. C58]
 gi|20141427|sp|Q44336|FLGC_AGRT5 RecName: Full=Flagellar basal-body rod protein flgC
 gi|15155492|gb|AAK86366.1| flagellar basal-body rod protein [Agrobacterium tumefaciens str.
           C58]
          Length = 139

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 81/136 (59%), Positives = 107/136 (78%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A++ IA SGL VQS R++I+SENIANAR+TGDTPG+DPYRRKT++F   +    G
Sbjct: 1   MDPLSAASKIAGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDHVSG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   +VKK+GVD+  FV E+DPG+P A+ +G+VK PNVNVL+E ADMRE NR Y ANLQ 
Sbjct: 61  VERVKVKKLGVDRGDFVHEYDPGNPAADTNGMVKMPNVNVLIEMADMREANRSYDANLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I+Q+ D++ +T+DLL+
Sbjct: 121 IRQTRDLVASTIDLLK 136


>gi|182680550|ref|YP_001834696.1| flagellar basal body rod protein FlgC [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636433|gb|ACB97207.1| flagellar basal-body rod protein FlgC [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 138

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 72/136 (52%), Positives = 95/136 (69%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS  IA SGL  QS R+++ISEN+AN+ +TG T G++PY+RKT++F   M    G
Sbjct: 2   IDPLKASMKIAGSGLEAQSTRLRVISENMANSESTGTTAGANPYQRKTVTFSSEMDRLSG 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V++K IG D + F  E DPG+P A+  G VK PNVN+L+E ADMRE NR Y ANLQ 
Sbjct: 62  LDLVQIKSIGKDTTPFQREHDPGNPAADDKGFVKRPNVNILIEMADMREANRSYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ+ D+ T T+DLLR
Sbjct: 122 LKQARDLSTMTIDLLR 137


>gi|17989433|ref|NP_542066.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 1
           str. 16M]
 gi|62317101|ref|YP_222954.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 1 str.
           9-941]
 gi|83269093|ref|YP_418384.1| flagellar basal body rod protein FlgC [Brucella melitensis biovar
           Abortus 2308]
 gi|163844344|ref|YP_001621999.1| flagellar basal body rod protein FlgC [Brucella suis ATCC 23445]
 gi|189022366|ref|YP_001932107.1| flagellar basal body rod protein FlgC [Brucella abortus S19]
 gi|225628623|ref|ZP_03786657.1| flagellar basal-body rod protein FlgC [Brucella ceti str. Cudo]
 gi|225686010|ref|YP_002733982.1| flagellar basal body rod protein FlgC [Brucella melitensis ATCC
           23457]
 gi|237816663|ref|ZP_04595655.1| flagellar basal-body rod protein FlgC [Brucella abortus str. 2308
           A]
 gi|254691414|ref|ZP_05154668.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 6 str.
           870]
 gi|254695288|ref|ZP_05157116.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698386|ref|ZP_05160214.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254699459|ref|ZP_05161287.1| flagellar basal body rod protein FlgC [Brucella suis bv. 5 str.
           513]
 gi|254706294|ref|ZP_05168122.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
           M163/99/10]
 gi|254711412|ref|ZP_05173223.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
           B2/94]
 gi|254712011|ref|ZP_05173822.1| flagellar basal body rod protein FlgC [Brucella ceti M644/93/1]
 gi|254715080|ref|ZP_05176891.1| flagellar basal body rod protein FlgC [Brucella ceti M13/05/1]
 gi|256014940|ref|YP_003104949.1| flagellar basal body rod protein [Brucella microti CCM 4915]
 gi|256029958|ref|ZP_05443572.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
           M292/94/1]
 gi|256043071|ref|ZP_05446015.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256059610|ref|ZP_05449808.1| flagellar basal body rod protein FlgC [Brucella neotomae 5K33]
 gi|256111945|ref|ZP_05452896.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 3
           str. Ether]
 gi|256252926|ref|ZP_05458462.1| flagellar basal body rod protein FlgC [Brucella ceti B1/94]
 gi|256256600|ref|ZP_05462136.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 9 str.
           C68]
 gi|256262867|ref|ZP_05465399.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|260544339|ref|ZP_05820160.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260564301|ref|ZP_05834786.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260757028|ref|ZP_05869376.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 6 str.
           870]
 gi|260762844|ref|ZP_05875176.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882838|ref|ZP_05894452.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 9 str.
           C68]
 gi|261215657|ref|ZP_05929938.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 3 str.
           Tulya]
 gi|261216790|ref|ZP_05931071.1| flagellar basal-body rod protein FlgC [Brucella ceti M13/05/1]
 gi|261220017|ref|ZP_05934298.1| flagellar basal-body rod protein FlgC [Brucella ceti B1/94]
 gi|261313738|ref|ZP_05952935.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M163/99/10]
 gi|261319020|ref|ZP_05958217.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           B2/94]
 gi|261319657|ref|ZP_05958854.1| flagellar basal-body rod protein FlgC [Brucella ceti M644/93/1]
 gi|261323579|ref|ZP_05962776.1| flagellar basal-body rod protein FlgC [Brucella neotomae 5K33]
 gi|261749910|ref|ZP_05993619.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 5 str.
           513]
 gi|265986977|ref|ZP_06099534.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M292/94/1]
 gi|265989509|ref|ZP_06102066.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265993392|ref|ZP_06105949.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 3
           str. Ether]
 gi|294853173|ref|ZP_06793845.1| flagellar basal-body rod protein FlgC [Brucella sp. NVSL 07-0026]
 gi|297249956|ref|ZP_06933657.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 5 str.
           B3196]
 gi|17985310|gb|AAL54330.1| flagellar basal-body rod protein flgc [Brucella melitensis bv. 1
           str. 16M]
 gi|62197294|gb|AAX75593.1| FlgC, flagellar basal-body rod rotein FlgC [Brucella abortus bv. 1
           str. 9-941]
 gi|82939367|emb|CAJ12315.1| Flagellar basal body rod protein:Flagellar basal-body rod protein
           FlgC [Brucella melitensis biovar Abortus 2308]
 gi|163675067|gb|ABY39177.1| flagellar basal-body rod protein FlgC [Brucella suis ATCC 23445]
 gi|189020940|gb|ACD73661.1| Flagellar basal body rod protein [Brucella abortus S19]
 gi|225616469|gb|EEH13517.1| flagellar basal-body rod protein FlgC [Brucella ceti str. Cudo]
 gi|225642115|gb|ACO02028.1| flagellar basal-body rod protein FlgC [Brucella melitensis ATCC
           23457]
 gi|237787476|gb|EEP61692.1| flagellar basal-body rod protein FlgC [Brucella abortus str. 2308
           A]
 gi|255997600|gb|ACU49287.1| flagellar basal body rod protein [Brucella microti CCM 4915]
 gi|260097610|gb|EEW81484.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260151944|gb|EEW87037.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260673265|gb|EEX60086.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677136|gb|EEX63957.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 6 str.
           870]
 gi|260872366|gb|EEX79435.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 9 str.
           C68]
 gi|260917264|gb|EEX84125.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 3 str.
           Tulya]
 gi|260918601|gb|EEX85254.1| flagellar basal-body rod protein FlgC [Brucella ceti B1/94]
 gi|260921879|gb|EEX88447.1| flagellar basal-body rod protein FlgC [Brucella ceti M13/05/1]
 gi|261292347|gb|EEX95843.1| flagellar basal-body rod protein FlgC [Brucella ceti M644/93/1]
 gi|261298243|gb|EEY01740.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           B2/94]
 gi|261299559|gb|EEY03056.1| flagellar basal-body rod protein FlgC [Brucella neotomae 5K33]
 gi|261302764|gb|EEY06261.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M163/99/10]
 gi|261739663|gb|EEY27589.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 5 str.
           513]
 gi|262764262|gb|EEZ10294.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 3
           str. Ether]
 gi|263000178|gb|EEZ12868.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263092702|gb|EEZ16911.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|264659174|gb|EEZ29435.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M292/94/1]
 gi|294818828|gb|EFG35828.1| flagellar basal-body rod protein FlgC [Brucella sp. NVSL 07-0026]
 gi|297173825|gb|EFH33189.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 5 str.
           B3196]
 gi|326410333|gb|ADZ67397.1| flagellar basal body rod protein FlgC [Brucella melitensis M28]
 gi|326553625|gb|ADZ88264.1| flagellar basal body rod protein FlgC [Brucella melitensis M5-90]
          Length = 140

 Score =  190 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 72/135 (53%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF   +    G+
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGA 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|254720612|ref|ZP_05182423.1| flagellar basal body rod protein FlgC [Brucella sp. 83/13]
 gi|265985652|ref|ZP_06098387.1| flagellar basal-body rod protein FlgC [Brucella sp. 83/13]
 gi|306838574|ref|ZP_07471411.1| flagellar basal-body rod protein FlgC [Brucella sp. NF 2653]
 gi|264664244|gb|EEZ34505.1| flagellar basal-body rod protein FlgC [Brucella sp. 83/13]
 gi|306406360|gb|EFM62602.1| flagellar basal-body rod protein FlgC [Brucella sp. NF 2653]
          Length = 140

 Score =  190 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 72/135 (53%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF   +    G+
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADADPYRRKTVSFRTELEQGTGA 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|157371209|ref|YP_001479198.1| flagellar basal body rod protein FlgC [Serratia proteamaculans 568]
 gi|157322973|gb|ABV42070.1| flagellar basal-body rod protein FlgC [Serratia proteamaculans 568]
          Length = 134

 Score =  190 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    I+ S L+ QS R+ + + N+ANA +    P   PYR K + FE        +GG
Sbjct: 3   LLNIFDISGSALSAQSQRLNVSASNMANADSVSG-PDGQPYRAKQVVFEVASAAGQPTGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +     + PG+P+A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVAQVVDDPAPERLVYQPGNPLADGKGYVRMPNVDVVGEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  MM  TL L +
Sbjct: 122 TKSMMMKTLTLGQ 134


>gi|311105933|ref|YP_003978786.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
           A8]
 gi|310760622|gb|ADP16071.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
           A8]
          Length = 139

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------EVMH 56
           L++   IA S L+ QS RM + + N+ANA +    P   PYR + + F+        +  
Sbjct: 3   LLSIFDIAGSALSAQSQRMNVAASNMANADSVVG-PDGKPYRARQVVFQVNPPAGQALGQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GGVRV  +  DQS   + +DP HP+A+A G V  PNV+ + ET +M   +R Y AN++
Sbjct: 62  EIGGVRVAGVIEDQSPLKQVYDPQHPLADAQGYVSMPNVDPVAETVNMIAASRSYQANVE 121

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  +M  TL + +
Sbjct: 122 VLNTAKALMQKTLTIGQ 138


>gi|197285512|ref|YP_002151384.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227356003|ref|ZP_03840395.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
 gi|194682999|emb|CAR43448.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227163991|gb|EEI48893.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
          Length = 134

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L +   I+ S L+ QS R+ + + N+AN  +    P  +PYR K + F+         GG
Sbjct: 3   LFSIFDISGSALSAQSQRLNVSASNMANVDSVVG-PDGEPYRAKQVVFQVNAPAGQDIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V ++  D + F  E+ PG+P A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VHVTQVVDDPTPFRMEYQPGNPFADEKGYVRKPNVDVVGEMINTISASRSYQANVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL + +
Sbjct: 122 AKSLMQKTLMIGQ 134


>gi|253682065|ref|ZP_04862862.1| flagellar basal-body rod protein FlgC [Clostridium botulinum D str.
           1873]
 gi|253561777|gb|EES91229.1| flagellar basal-body rod protein FlgC [Clostridium botulinum D str.
           1873]
          Length = 145

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 51/142 (35%), Positives = 68/142 (47%), Gaps = 13/142 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPG-SDPYRRKTISFEEVMHGS----- 58
            +S  I+ SGL+ +  RM  IS NI N +TT    G  +PYRRK   F+E +        
Sbjct: 4   FSSLRISASGLSAERLRMDTISSNITNFKTTRGKDGNKEPYRRKIAVFQENLKKELSKDK 63

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV+   I  D+S     ++P HP A+  G V  PNVN+L E ADM    R Y
Sbjct: 64  KGYETSLNGVKAVGIVEDKSPLRRVYNPNHPDADKDGYVLMPNVNILNEMADMIAATRAY 123

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I  S  M    L++ R
Sbjct: 124 EANVTAINSSKSMFMKALEIGR 145


>gi|1857438|gb|AAC45656.1| FlgC [Proteus mirabilis]
          Length = 134

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L +   I+ S L+ QS R+ + + N+AN  +    P  +PYR K + F+         GG
Sbjct: 3   LFSIFDISGSALSAQSQRLNVSASNMANVDSVVG-PDGEPYRAKQVVFQVNAPAGQEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V ++  D + F  E+ PG+P A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VHVTQVVDDPTPFRMEYQPGNPFADEKGYVRKPNVDVVGEMINTISASRSYQANVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL + +
Sbjct: 122 AKSLMQKTLMIGQ 134


>gi|241203104|ref|YP_002974200.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856994|gb|ACS54661.1| flagellar basal-body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 138

 Score =  190 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 83/136 (61%), Positives = 105/136 (77%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRTNG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+  G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVGVKKVGVDEGDFSTEFDPSNPAADPKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D++++T+DLL+
Sbjct: 121 IKQTRDLISSTIDLLK 136


>gi|116250480|ref|YP_766318.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115255128|emb|CAK06202.1| putative flagellar basal-body rod protein flgc (putative proximal
           rod protein) [Rhizobium leguminosarum bv. viciae 3841]
          Length = 138

 Score =  190 bits (483), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 84/136 (61%), Positives = 105/136 (77%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  S G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRSNG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+  G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVGVKKVGVDEGDFSTEFDPSNPAADQKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D++++T+DLL+
Sbjct: 121 IKQTRDLISSTIDLLK 136


>gi|256158120|ref|ZP_05456038.1| flagellar basal body rod protein FlgC [Brucella ceti M490/95/1]
 gi|265996637|ref|ZP_06109194.1| flagellar basal-body rod protein FlgC [Brucella ceti M490/95/1]
 gi|262550934|gb|EEZ07095.1| flagellar basal-body rod protein FlgC [Brucella ceti M490/95/1]
          Length = 140

 Score =  190 bits (483), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 71/135 (52%), Positives = 99/135 (73%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF   +    G+
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGA 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+ ++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIGQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|242238967|ref|YP_002987148.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech703]
 gi|242131024|gb|ACS85326.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech703]
          Length = 134

 Score =  190 bits (483), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHGSGG 60
           L +   I+ S L  QS RM + + N+ANA +    P   PYR K + F          GG
Sbjct: 3   LTSIFEISGSALTAQSQRMNVSASNLANADSV-TGPDGQPYRAKQVVFKLAATEGQEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  +  D S     + PG+P+A+  G V+ PNV+V  E  +    +R Y AN++ +  
Sbjct: 62  VRVDDVVEDPSPDKLVYQPGNPLADQRGYVRMPNVDVAAEMVNSISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 AKTLMQKTLTLGQ 134


>gi|239834444|ref|ZP_04682772.1| flagellar basal-body rod protein FlgC [Ochrobactrum intermedium LMG
           3301]
 gi|239822507|gb|EEQ94076.1| flagellar basal-body rod protein FlgC [Ochrobactrum intermedium LMG
           3301]
          Length = 140

 Score =  190 bits (483), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 69/135 (51%), Positives = 99/135 (73%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF   +    G+
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTAKTADADPYRRKTVSFRTELEQGTGA 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VR+ ++G D S F+E+++P HP A+  G V+YPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRIAEVGKDTSPFIEQYEPSHPAADERGYVRYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           KQ+ ++++ T+DLLR
Sbjct: 124 KQARELISMTIDLLR 138


>gi|331269312|ref|YP_004395804.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
           BKT015925]
 gi|329125862|gb|AEB75807.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
           BKT015925]
          Length = 145

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 51/142 (35%), Positives = 68/142 (47%), Gaps = 13/142 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVMHGS----- 58
            +S  I+ SGL+ +  RM  IS NI N +TT    G  +PYRRK   F+E          
Sbjct: 4   FSSLRISASGLSAERLRMDTISSNITNFKTTRGKDGQKEPYRRKIAVFQENFKKELGKNK 63

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV+   I  D+S     ++P HP A+  G V  PNVN+L E ADM    R Y
Sbjct: 64  KGYETSLNGVKAVGIVEDKSPLRRVYNPNHPDADKDGYVLMPNVNILNEMADMIAATRAY 123

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I  S +M    L++ R
Sbjct: 124 EANVTAINSSKNMFMKALEIGR 145


>gi|319403959|emb|CBI77547.1| Flagellar basal-body rod protein flgC [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 138

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 67/135 (49%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---S 58
           D LIA+  IA +GL+ QS R+++I+EN+ANA +TG +PG+ PY+RKT+SFE  ++    +
Sbjct: 3   DRLIAAEQIATTGLSAQSTRLRVIAENLANANSTGKSPGARPYQRKTVSFEATLNPYLDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV V +I  D++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVTRISTDKAPFIMRYEPGHLAADSNGYVKYPNVNSIIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ D+++ T+DLL+
Sbjct: 123 RQARDLISQTIDLLK 137


>gi|290474970|ref|YP_003467854.1| flagellar basal body rod cell-proximal protein [Xenorhabdus
           bovienii SS-2004]
 gi|289174287|emb|CBJ81077.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus bovienii SS-2004]
          Length = 134

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHGSGG 60
           L++   IA+S L+ QS R+ + + N+ANA +    P  +PYR K + F          GG
Sbjct: 3   LLSIFDIASSALSAQSQRLNVSASNMANADSVVG-PDGEPYRAKQVVFRVAAPAGQEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D + F  E+ PG+P+A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVSEVVDDPTPFRLEYRPGNPLADEKGYVRMPNVDVVGEMVNTISASRSYQANIEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSIMLKTLTLGQ 134


>gi|295399807|ref|ZP_06809788.1| flagellar basal-body rod protein FlgC [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312111681|ref|YP_003989997.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y4.1MC1]
 gi|294978210|gb|EFG53807.1| flagellar basal-body rod protein FlgC [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311216782|gb|ADP75386.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y4.1MC1]
          Length = 150

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 47/148 (31%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG--- 57
           +  +  I  S L  Q  RM ++S N+AN  TT         +PYRRK +  E    G   
Sbjct: 3   MFQNLDITASALTAQRLRMDVVSSNMANVDTTRARFVNGQWEPYRRKLVVMEPRQEGFST 62

Query: 58  ------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                        GGVRV KI  D + F   +DP HP A+ +G V+ PNV+ L E  D+ 
Sbjct: 63  YLQAAMNSRDSVGGGVRVTKIVEDPAPFKLVYDPSHPDADRNGYVRLPNVDPLKEMVDLM 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+     +  M+   L++ +
Sbjct: 123 SATRSYEANVTVFNATKGMLMKALEIGK 150


>gi|212639569|ref|YP_002316089.1| flagellar basal body rod protein FlgC [Anoxybacillus flavithermus
           WK1]
 gi|212561049|gb|ACJ34104.1| Flagellar basal body rod protein FlgC [Anoxybacillus flavithermus
           WK1]
          Length = 145

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 15/145 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTIS------FEEV 54
           +  S +++ S L  Q  RM +IS N+AN  TT          PYRRK +       F   
Sbjct: 1   MFQSFNVSASALTAQRLRMDVISANMANVDTTRAKMVDGKWQPYRRKMVVMQPNESFSSF 60

Query: 55  MHGS------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
           ++ +      GGV+V +I  DQ+ F   +DP HP A+ +G V+ PNV+ L E  D+    
Sbjct: 61  LNQAMNERSTGGVKVTEIIEDQTPFKLVYDPSHPDADENGYVQLPNVDPLKEMVDLMSAT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  +  +  M+   L++ +
Sbjct: 121 RSYEANVTVLNATKGMLMKALEIGK 145


>gi|238793996|ref|ZP_04637614.1| Flagellar basal-body rod protein flgC [Yersinia intermedia ATCC
           29909]
 gi|238726628|gb|EEQ18164.1| Flagellar basal-body rod protein flgC [Yersinia intermedia ATCC
           29909]
          Length = 134

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           L+    IA S L+ QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALSAQSQRLNVSASNMANADSV-TGPDGQPYRAKQVVFQVAAQPGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV +I  D +     + PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  
Sbjct: 62  VRVSQIVDDPAPDRLVYQPGNPLADAKGYVRMPNVDVTGEMINTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMLKTLTLGQ 134


>gi|23499914|ref|NP_699354.1| flagellar basal body rod protein FlgC [Brucella suis 1330]
 gi|23463491|gb|AAN33359.1| flagellar basal-body rod protein FlgC [Brucella suis 1330]
          Length = 140

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 72/135 (53%), Positives = 99/135 (73%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L ++  IA SGL+ QS R+ I+SENIANA++T  T  +DPYRRKT+SF   +    G+
Sbjct: 4   DALQSTLKIAASGLSAQSTRLCIVSENIANAQSTAKTADTDPYRRKTVSFRTELEQGTGA 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|239826611|ref|YP_002949235.1| flagellar basal body rod protein FlgC [Geobacillus sp. WCH70]
 gi|239806904|gb|ACS23969.1| flagellar basal-body rod protein FlgC [Geobacillus sp. WCH70]
          Length = 150

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG--- 57
           +  S  I  S L  Q  RM +IS N+AN  TT         +PYRRK +  E    G   
Sbjct: 3   IFQSLDITASALTAQRLRMDVISSNMANVDTTHARLVNGQWEPYRRKFVVMEPRQEGFST 62

Query: 58  ------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GVRV KI  DQ+ F   +DP HP A+ +G V+ PNV+ L E  D+ 
Sbjct: 63  YLQAAMNSRSSVGNGVRVTKIMEDQTPFKLVYDPSHPDADPNGYVRLPNVDPLKEMVDLM 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+     +  M+   L++ +
Sbjct: 123 SATRSYEANVTVFNATKGMLMKALEIGK 150


>gi|153011526|ref|YP_001372740.1| flagellar basal body rod protein FlgC [Ochrobactrum anthropi ATCC
           49188]
 gi|151563414|gb|ABS16911.1| flagellar basal-body rod protein FlgC [Ochrobactrum anthropi ATCC
           49188]
          Length = 140

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 69/135 (51%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L ++  IA SGL+ QS R++I+SENIANA++T +T  +DPYRRKT+SF   +    G+
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTAETADADPYRRKTVSFRTELEQGTGA 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VR+ ++G D S F+E+++P HP A+  G V+YPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRIAEVGKDTSPFIEQYEPSHPAADERGYVRYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           KQ+ ++++ T+DLLR
Sbjct: 124 KQARELISMTIDLLR 138


>gi|91776307|ref|YP_546063.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus
           KT]
 gi|91710294|gb|ABE50222.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus
           KT]
          Length = 135

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 5/134 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----HGSG 59
           L    +I+ S ++ Q  R+ +++ N+ANA +   + G  PYR K I F  V       + 
Sbjct: 3   LFNVFNISGSAMSAQGQRLNVVASNLANADSVTSSNG-QPYRTKHIVFSAVPVNAKGDAQ 61

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V++I  DQ+    ++DP HP+A+A+G V  PNVNV  E  +M   +R Y  N++T+ 
Sbjct: 62  GVKVQQIVEDQAPPQLKYDPKHPLADANGYVAMPNVNVTEEMVNMISASRSYQNNVETMN 121

Query: 120 QSHDMMTTTLDLLR 133
            +  M+  TL + +
Sbjct: 122 AAKSMLLKTLTIGQ 135


>gi|23016761|ref|ZP_00056514.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 138

 Score =  190 bits (483), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 65/136 (47%), Positives = 86/136 (63%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L+ S+ IA SGL VQS R+++ISEN+ANA +   TP   PY+RKT++F+  +    G
Sbjct: 3   MDPLMNSSKIAKSGLKVQSQRLRVISENLANADSLAQTPEGLPYQRKTVTFKNELDREMG 62

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V K+  D + F   +DP HP A+  G V  PNVN L+E  DMRE  R Y ANLQ 
Sbjct: 63  TKLVKVDKVRPDNAEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREAQRSYEANLQV 122

Query: 118 IKQSHDMMTTTLDLLR 133
           I+ S  MM  T+DLL+
Sbjct: 123 IQTSRTMMDRTMDLLK 138


>gi|225850273|ref|YP_002730507.1| flagellar basal-body rod protein FlgC [Persephonella marina EX-H1]
 gi|225645322|gb|ACO03508.1| flagellar basal-body rod protein FlgC [Persephonella marina EX-H1]
          Length = 136

 Score =  190 bits (483), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 6/135 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           +     ++ +G+A Q  R+ I S N+AN  +T  T    PYRRK   F+ V+        
Sbjct: 2   IFKGLEVSVTGMAAQRIRIDITSSNLANVNSTR-TEDGQPYRRKVPVFQAVLDNQTKTPV 60

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V++ ++  D S F  +FDP HP A+ +G V YPNV+ L E  DM    R Y ANL   
Sbjct: 61  YKVKIPEVIEDPSPFKLKFDPSHPDADQNGYVAYPNVDPLREMVDMMSAIRTYEANLTAF 120

Query: 119 KQSHDMMTTTLDLLR 133
               DM+  +L+L+R
Sbjct: 121 NTHKDMLLKSLELIR 135


>gi|319406974|emb|CBI80611.1| Flagellar basal-body rod protein flgC [Bartonella sp. 1-1C]
          Length = 138

 Score =  190 bits (483), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 67/135 (49%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---S 58
           D LIA+  IA +GL+ QS R+++I+EN+ANA +TG +PG+ PY+RKT+SFE  ++    +
Sbjct: 3   DRLIAAEQIATTGLSAQSTRLRVIAENLANANSTGKSPGARPYQRKTVSFEATLNPYIDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV V +I  D++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVTRISTDKAPFIMRYEPGHLAADSNGYVKYPNVNSIIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ D+++ T+DLL+
Sbjct: 123 RQARDLISQTIDLLK 137


>gi|294635608|ref|ZP_06714085.1| flagellar basal-body rod protein FlgC [Edwardsiella tarda ATCC
           23685]
 gi|291091060|gb|EFE23621.1| flagellar basal-body rod protein FlgC [Edwardsiella tarda ATCC
           23685]
          Length = 134

 Score =  190 bits (483), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L++   I+ S L  QS RM + + N+ANA +    P  +PYR K + F+         GG
Sbjct: 3   LLSIFDISGSALTAQSKRMNVAASNLANADSV-TGPDGEPYRAKQVVFQVKPGAGEEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++  D S     + PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VQVSQVVDDPSPDRLVYQPGNPLADAKGYVRMPNVDVVGEMVNSIAASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMMKTLTLGQ 134


>gi|161620234|ref|YP_001594120.1| flagellar basal body rod protein FlgC [Brucella canis ATCC 23365]
 gi|254702574|ref|ZP_05164402.1| flagellar basal body rod protein FlgC [Brucella suis bv. 3 str.
           686]
 gi|260568518|ref|ZP_05838987.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|261753154|ref|ZP_05996863.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 3 str.
           686]
 gi|161337045|gb|ABX63349.1| flagellar basal-body rod protein FlgC [Brucella canis ATCC 23365]
 gi|260155183|gb|EEW90264.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|261742907|gb|EEY30833.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 3 str.
           686]
          Length = 140

 Score =  189 bits (482), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 72/135 (53%), Positives = 99/135 (73%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L ++  IA SGL+ QS R+ I+SENIANA++T  T  +DPYRRKT+SF   +    G+
Sbjct: 4   DALQSTLKIAASGLSAQSTRLCIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGA 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|209547926|ref|YP_002279843.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533682|gb|ACI53617.1| flagellar basal-body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 138

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 83/136 (61%), Positives = 105/136 (77%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+  G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVDVKKVGVDEGDFSTEFDPSNPAADQKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D++++T+DLL+
Sbjct: 121 IKQTRDLISSTIDLLK 136


>gi|144900468|emb|CAM77332.1| Flagellar basal-body rod protein FlgC [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 137

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 57/136 (41%), Positives = 83/136 (61%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  ++ IA SG+  QS R+++ISEN+ANA +   TP   PY+RK ++F+  +  + G
Sbjct: 1   MDELQKASKIAISGMKAQSERLRVISENLANADSLARTPDGTPYKRKVVTFKSELDRANG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V K+  D S F   +DP HP A+  G V  PNVN L+E  DMRE  R Y AN+  
Sbjct: 61  YTGVKVDKVRPDASEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREAQRSYEANMNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I  S  +++ T+++LR
Sbjct: 121 INSSRQLLSRTVEMLR 136


>gi|222053600|ref|YP_002535962.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
 gi|221562889|gb|ACM18861.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
          Length = 146

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 74/148 (50%), Gaps = 17/148 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           MD+   S  I+ S L  +  RM +IS N+ANA +T    G  PY+RK   F         
Sbjct: 1   MDF-FTSMDISASALTAERTRMNLISSNLANAGSTRTAEGG-PYKRKDAVFAAEPVVEPF 58

Query: 54  --VMHGSGG------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
             ++  +GG      V V +I  DQ+    ++DP HP A+A G V  PNVNV+ E ADM 
Sbjct: 59  SSILKKAGGSMEPKQVGVVQITEDQTPPRLQYDPTHPDADAKGYVALPNVNVVEEMADMI 118

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+   + +  M   TL+L R
Sbjct: 119 AATRTYEANVTAAQAAKSMALKTLELGR 146


>gi|224531802|ref|ZP_03672434.1| flagellar basal-body rod protein FlgC [Borrelia valaisiana VS116]
 gi|224511267|gb|EEF81673.1| flagellar basal-body rod protein FlgC [Borrelia valaisiana VS116]
          Length = 152

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F   ++       
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVNNPYWKGP 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                       GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISFGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|154250382|ref|YP_001411207.1| flagellar basal-body rod protein FlgC [Fervidobacterium nodosum
           Rt17-B1]
 gi|154154318|gb|ABS61550.1| flagellar basal-body rod protein FlgC [Fervidobacterium nodosum
           Rt17-B1]
          Length = 138

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 54/139 (38%), Positives = 74/139 (53%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M       +I+ +GL+ Q  R+++IS NIAN+ TT    G  PYRRK   F+EV+     
Sbjct: 1   MQSEFNIMNISATGLSAQRFRIEVISTNIANSETTRTENGG-PYRRKVPVFQEVLRNIKG 59

Query: 58  ---SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              +GGV VK I  D S +   +DP HP A+ +G VK PNVN++ E  DM    R Y AN
Sbjct: 60  NQENGGVMVKSIYEDPSEYRIVYDPTHPDADENGYVKLPNVNIVREMVDMINAQRAYEAN 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
              I  +  M+   L + R
Sbjct: 120 ATAINTTKAMINAALQIGR 138


>gi|291288218|ref|YP_003505034.1| flagellar basal-body rod protein FlgC [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885378|gb|ADD69078.1| flagellar basal-body rod protein FlgC [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 134

 Score =  189 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGV 61
                 +A +G++ Q  R+  IS N+ANA TT  T    PY R+ + F++V+ G  +GGV
Sbjct: 3   FFDVLGVAGTGMSAQRIRISAISANLANANTTR-TDDGGPYVRQDVIFKQVLEGELAGGV 61

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V ++  D+   + +++PGHP A+  G V YPN+N + E  +M E ++ Y AN   +  +
Sbjct: 62  KVTEVVKDEKPPILKYEPGHPDADEEGYVAYPNINPIEEMVNMLEASKSYEANTTVVSTA 121

Query: 122 HDMMTTTLDLLR 133
             +    L++ R
Sbjct: 122 KQLAMKALEIGR 133


>gi|270262403|ref|ZP_06190674.1| flagellar basal-body rod protein FlgC [Serratia odorifera 4Rx13]
 gi|270043087|gb|EFA16180.1| flagellar basal-body rod protein FlgC [Serratia odorifera 4Rx13]
          Length = 134

 Score =  189 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    I+ S L+ QS RM + + N+ANA +    P  +PYR K + FE        +GG
Sbjct: 3   LLNIFDISGSALSAQSQRMNVSASNMANADSV-TGPDGEPYRAKQVVFEVAAAAGQPTGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +     + PG+P+A+  G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVSQVVDDPAPERLVYQPGNPLADGKGYVRMPNVDVVSEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  MM  TL L +
Sbjct: 122 TKSMMMKTLTLGQ 134


>gi|325529011|gb|EGD06024.1| flagellar basal body rod protein FlgC [Burkholderia sp. TJI49]
          Length = 141

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +    P   PY+ K + F         
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADS-ATGPDGKPYKAKQVVFATDPIGGAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y
Sbjct: 60  TASGQGVGGVRVTKVVDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKQLMLKTLTIG 140


>gi|289523576|ref|ZP_06440430.1| flagellar basal-body rod protein FlgC [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503268|gb|EFD24432.1| flagellar basal-body rod protein FlgC [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 136

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 53/134 (39%), Positives = 70/134 (52%), Gaps = 5/134 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----GSG 59
           L  S  IA S L      M +IS+N+AN  TT    G  PYRRK   F E +     G+ 
Sbjct: 3   LFDSLEIAGSSLTAHRLWMDLISQNLANVNTTRTQDGG-PYRRKVPIFAERLEAAEKGAK 61

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV+KI  D       + P HP A+  G V YPNVNV+ E  DM    R Y ANL  ++
Sbjct: 62  GVRVEKIEEDDLPPRMVYQPEHPDADEEGYVAYPNVNVVREMTDMMAATRAYEANLMVVE 121

Query: 120 QSHDMMTTTLDLLR 133
            + ++  + +D+LR
Sbjct: 122 SAKEIWGSAIDVLR 135


>gi|284041507|ref|YP_003391847.1| flagellar basal-body rod protein FlgC [Conexibacter woesei DSM
           14684]
 gi|283945728|gb|ADB48472.1| flagellar basal-body rod protein FlgC [Conexibacter woesei DSM
           14684]
          Length = 149

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 77/148 (52%), Gaps = 19/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS--------FEEVM 55
           L  +  IA SGL  +  RM + +EN+ANA+TT    G  PY+RK +         F  ++
Sbjct: 3   LFDAIDIAGSGLTAERLRMDVTAENLANAQTTRAADGG-PYQRKEVVLQQSGGSSFSTML 61

Query: 56  HG----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            G          S GV V  I  DQ+   + +DPGHP A+  G V  PNVN + E  D+ 
Sbjct: 62  TGAIGGVRASEASKGVEVAGIVEDQTAQRQVYDPGHPDADPRGYVAMPNVNPVTEMVDLI 121

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++R Y AN+  ++ +  M T TL+LLR
Sbjct: 122 SSSRSYEANVTAMQSAKQMFTKTLELLR 149


>gi|83720057|ref|YP_440799.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|167579486|ref|ZP_02372360.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           TXDOH]
 gi|167617583|ref|ZP_02386214.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           Bt4]
 gi|257140550|ref|ZP_05588812.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|83653882|gb|ABC37945.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
          Length = 141

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S ++ QS R+ + + N+ANA +    P   PY+ K + F         
Sbjct: 1   MPSLMNIFDVAGSAMSAQSQRLNVTASNLANADSV-TGPDGKPYKAKQVVFATAPMGGAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGV+V K+  D S     +DP +P A+ +G V  PNV+ + E  +M   +R Y
Sbjct: 60  TASGQGVGGVQVTKVIDDPSPMKTTYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKQLMLKTLTIG 140


>gi|293395581|ref|ZP_06639864.1| flagellar basal-body rod protein FlgC [Serratia odorifera DSM 4582]
 gi|291421900|gb|EFE95146.1| flagellar basal-body rod protein FlgC [Serratia odorifera DSM 4582]
          Length = 134

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    I+ S L+ QS R+ + + N+ANA +    P   PYR K + FE        +GG
Sbjct: 3   LLNIFDISGSALSAQSQRLNVSASNMANADSVSG-PDGQPYRAKQVVFEVAAAPGQPTGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  I  D +     F PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVASIVDDPAPERLVFQPGNPLADAKGYVRMPNVDVVGEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  MM  TL L +
Sbjct: 122 TKSMMMKTLTLGQ 134


>gi|291613036|ref|YP_003523193.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus
           ES-1]
 gi|291583148|gb|ADE10806.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus
           ES-1]
          Length = 134

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           L    +IA S +  QS R+ +++ N+AN  +    P   PY+ K + F  V        G
Sbjct: 3   LFNIFNIAGSAMTAQSQRLNVVASNLANVDS-ATGPDGKPYKAKQVVFSTVPITGQVGEG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +  D S     +DP +P+A+  G V  PNVN + E  +M   +R Y  N+  +  
Sbjct: 62  VKVAAVVEDNSPMKTVYDPKNPLADGQGYVTMPNVNPVDEMVNMISASRSYQNNVDVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           S  ++T TL + +
Sbjct: 122 SKTLLTKTLTIGQ 134


>gi|83589621|ref|YP_429630.1| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC
           39073]
 gi|83572535|gb|ABC19087.1| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC
           39073]
          Length = 145

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 15/145 (10%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---- 58
            L+ +  I+ SGL  +  R+ II+ N+AN  TT  TP   PYRR+   F E +  +    
Sbjct: 2   ELLPALAISASGLTAERLRLDIIANNLANINTTR-TPRGGPYRREVPVFAERLQEAMGQL 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GV V  I  D S     +DP HP A+A+G V  PN+N++ E  DM   +
Sbjct: 61  PGRPSSRAPGAGVEVAAIVEDNSPPRLVYDPSHPDADANGYVHLPNINIVNEMVDMITAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  +  +  M    L++ R
Sbjct: 121 RAYEANVTVLNAAKAMTLKALEIGR 145


>gi|161503737|ref|YP_001570849.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865084|gb|ABX21707.1| hypothetical protein SARI_01822 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 134

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSKRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVDAAPGQATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVASVIESQAPEKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|327193034|gb|EGE59946.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512]
          Length = 138

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 85/136 (62%), Positives = 105/136 (77%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M    G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDHVSG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+A G+VK PNVNVLVE ADMRE NR Y ANLQT
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADAKGVVKLPNVNVLVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D++++T+DLL+
Sbjct: 121 IKQTRDLISSTIDLLK 136


>gi|82777311|ref|YP_403660.1| flagellar basal body rod protein FlgC [Shigella dysenteriae Sd197]
 gi|309788141|ref|ZP_07682747.1| flagellar basal-body rod protein FlgC [Shigella dysenteriae 1617]
 gi|81241459|gb|ABB62169.1| cell-proximal portion of basal-body rod [Shigella dysenteriae
           Sd197]
 gi|308923993|gb|EFP69494.1| flagellar basal-body rod protein FlgC [Shigella dysenteriae 1617]
          Length = 134

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSQRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVNSAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  I   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVADIIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|330818587|ref|YP_004362292.1| flagellar basal-body rod protein FlgC [Burkholderia gladioli BSR3]
 gi|327370980|gb|AEA62336.1| flagellar basal-body rod protein FlgC [Burkholderia gladioli BSR3]
          Length = 141

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S ++ +S R+ + + N+ANA +    P   PYR K + FE        
Sbjct: 1   MPSLMNIFDVAGSAMSAESQRLNVTASNLANADSV-TGPDGKPYRAKQVVFETQPVGNAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGV+VK++  D S     +DP +P A+A+G V  PNV+ + E  +M   +R Y
Sbjct: 60  TRSGQGVGGVQVKQVIDDPSPMKTNYDPSNPAADANGYVTMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKQLMLKTLTIG 140


>gi|161526188|ref|YP_001581200.1| flagellar basal body rod protein FlgC [Burkholderia multivorans
           ATCC 17616]
 gi|189349096|ref|YP_001944724.1| flagellar basal body rod protein FlgC [Burkholderia multivorans
           ATCC 17616]
 gi|221199737|ref|ZP_03572780.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2M]
 gi|221208658|ref|ZP_03581658.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2]
 gi|221215569|ref|ZP_03588532.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD1]
 gi|160343617|gb|ABX16703.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           ATCC 17616]
 gi|189333118|dbj|BAG42188.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
           17616]
 gi|221164557|gb|EED97040.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD1]
 gi|221171469|gb|EEE03916.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2]
 gi|221179976|gb|EEE12380.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2M]
          Length = 141

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +    P   PY+ K + F         
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADS-ATGPDGKPYKAKQVVFATDPIGGAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y
Sbjct: 60  TASGQGVGGVRVTKVIDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKQLMLKTLTIG 140


>gi|224534284|ref|ZP_03674862.1| flagellar basal-body rod protein FlgC [Borrelia spielmanii A14S]
 gi|224514386|gb|EEF84702.1| flagellar basal-body rod protein FlgC [Borrelia spielmanii A14S]
          Length = 152

 Score =  188 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F   ++       
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRINNPYWKGP 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                       GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|218549198|ref|YP_002382989.1| flagellar basal body rod protein FlgC [Escherichia fergusonii ATCC
           35469]
 gi|218356739|emb|CAQ89367.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
 gi|324113869|gb|EGC07843.1| flagellar basal-body rod protein FlgC [Escherichia fergusonii B253]
 gi|325497618|gb|EGC95477.1| flagellar basal body rod protein FlgC [Escherichia fergusonii
           ECD227]
          Length = 134

 Score =  188 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSQRLNVAASNLANADSV-TGPDGQPYRAKHVVFQVDNAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVAGVVESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|219684534|ref|ZP_03539477.1| flagellar basal-body rod protein FlgC [Borrelia garinii PBr]
 gi|219685765|ref|ZP_03540576.1| flagellar basal-body rod protein FlgC [Borrelia garinii Far04]
 gi|219671896|gb|EED28950.1| flagellar basal-body rod protein FlgC [Borrelia garinii PBr]
 gi|219672704|gb|EED29732.1| flagellar basal-body rod protein FlgC [Borrelia garinii Far04]
          Length = 152

 Score =  188 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 73/150 (48%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F   +        
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVSNPYWKGP 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                       GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISFGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|134297200|ref|YP_001120935.1| flagellar basal body rod protein FlgC [Burkholderia vietnamiensis
           G4]
 gi|134140357|gb|ABO56100.1| flagellar basal-body rod protein FlgC [Burkholderia vietnamiensis
           G4]
          Length = 141

 Score =  188 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +    P   PY+ K + F         
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADS-ATGPDGKPYKAKQVVFATDPLGGAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y
Sbjct: 60  TASGQGVGGVRVTKVVDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKTLMLKTLTIG 140


>gi|218672513|ref|ZP_03522182.1| flagellar basal body rod protein FlgC [Rhizobium etli GR56]
          Length = 138

 Score =  188 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 83/136 (61%), Positives = 105/136 (77%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+  G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADQKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D++++T+DLL+
Sbjct: 121 IKQTRDLISSTIDLLK 136


>gi|168334478|ref|ZP_02692649.1| Flagellar basal body rod protein [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 153

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 23/152 (15%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
             +   IA +GL  Q  R+ +I++N+AN  +T  TP   PY+R+T+ FE +         
Sbjct: 3   FFSGMDIAATGLTAQRFRLDVITQNLANINSTR-TPDGGPYQRRTVLFESIPMRDAANKL 61

Query: 55  -------------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                        M+ + GV+V  I  D + F   FDP HP AN  G V+ PNV+V+ E 
Sbjct: 62  PDNFHNILNRNLNMYHTSGVQVSGIVEDDTPFPLIFDPTHPDANEEGYVEMPNVDVVTEM 121

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +M   +R Y AN+        M T  LDL R
Sbjct: 122 VNMISASRSYEANVTAFNNLKSMNTKALDLGR 153


>gi|148558590|ref|YP_001257211.1| flagellar basal body rod protein FlgC [Brucella ovis ATCC 25840]
 gi|148369875|gb|ABQ62747.1| flagellar basal-body rod protein FlgC [Brucella ovis ATCC 25840]
          Length = 140

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/135 (54%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L ++  IA SGL+VQS R++I+SENIANA++T  T  +DPYRRKT+SF   +    G+
Sbjct: 4   DALQSTLKIAASGLSVQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRAELEQGTGA 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|269138580|ref|YP_003295280.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|267984240|gb|ACY84069.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|304558590|gb|ADM41254.1| Flagellar basal-body rod protein FlgC [Edwardsiella tarda FL6-60]
          Length = 134

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L++   I+ S L  QS RM + + N+ANA +    P  +PYR K + F+         GG
Sbjct: 3   LLSIFDISGSALTAQSKRMNVAASNLANADSV-TGPDGEPYRAKQVVFQVKPGAGEEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++  D +     + PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VQVSQVVDDPAPDRLVYQPGNPLADAKGYVRMPNVDVVGEMVNSIAASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMMKTLTLGQ 134


>gi|167835109|ref|ZP_02461992.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           MSMB43]
          Length = 141

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S ++ QS R+ + + N+ANA +    P   PY+ K + F         
Sbjct: 1   MPSLMNIFDVAGSAMSAQSQRLNVTASNLANADSV-TGPDGKPYKAKQVVFATAPMGRAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGV+V K+  D S     +DP +P A+ +G V  PNV+ + E  +M   +R Y
Sbjct: 60  TASGQGVGGVQVTKVVDDPSPMKTTYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKQLMLKTLTIG 140


>gi|190890361|ref|YP_001976903.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|190695640|gb|ACE89725.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 138

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 85/136 (62%), Positives = 106/136 (77%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+A G+VK PNVNVLVE ADMRE NR Y ANLQT
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADAKGVVKLPNVNVLVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D++++T+DLL+
Sbjct: 121 IKQTRDLISSTIDLLK 136


>gi|254251189|ref|ZP_04944507.1| flagella basal body rod protein [Burkholderia dolosa AUO158]
 gi|124893798|gb|EAY67678.1| flagella basal body rod protein [Burkholderia dolosa AUO158]
          Length = 141

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +    P   PY+ K + F         
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADS-ATGPDGKPYKAKQVVFATDPMGGAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGVRV K+  D S     +DP +P A+ +G V+ PNV+ + E  +M   +R Y
Sbjct: 60  TASGQGVGGVRVTKVIDDPSPMKSTYDPANPAADENGYVQMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKQLMLKTLTIG 140


>gi|300311350|ref|YP_003775442.1| flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1]
 gi|300074135|gb|ADJ63534.1| Flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1]
          Length = 134

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L    ++A S ++ QS R+   + NIANA +   +P   PY+ K + F+ +  G     G
Sbjct: 3   LSNIFNVAGSAMSAQSQRLNATASNIANADS-ATSPDGTPYKAKQVVFQAIPVGGVKDSG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +  DQ+     +DP HP+A+ +G V  PNVN + E  +M   +R Y  N++T+  
Sbjct: 62  VKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TL + +
Sbjct: 122 AKAMLVKTLTIGQ 134


>gi|216264021|ref|ZP_03436015.1| flagellar basal-body rod protein FlgC [Borrelia afzelii ACA-1]
 gi|215980065|gb|EEC20887.1| flagellar basal-body rod protein FlgC [Borrelia afzelii ACA-1]
          Length = 152

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F   ++       
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVNNPYWKGP 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                       GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|15594638|ref|NP_212427.1| flagellar basal body rod protein FlgC [Borrelia burgdorferi B31]
 gi|195941353|ref|ZP_03086735.1| flagellar basal body rod protein FlgC [Borrelia burgdorferi 80a]
 gi|216264936|ref|ZP_03436928.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 156a]
 gi|218249308|ref|YP_002374816.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi ZS7]
 gi|221217671|ref|ZP_03589139.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 72a]
 gi|223888936|ref|ZP_03623527.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 64b]
 gi|224533191|ref|ZP_03673791.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           WI91-23]
 gi|224533682|ref|ZP_03674270.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           CA-11.2a]
 gi|225549042|ref|ZP_03770017.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 94a]
 gi|225550067|ref|ZP_03771027.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 118a]
 gi|226320594|ref|ZP_03796154.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 29805]
 gi|2494521|sp|Q57466|FLGC_BORBU RecName: Full=Flagellar basal-body rod protein flgC
 gi|1165277|gb|AAA85616.1| FlgC [Borrelia burgdorferi]
 gi|1196316|gb|AAB51408.1| flagellar basal body rod protein [Borrelia burgdorferi]
 gi|2688173|gb|AAC66655.1| flagellar basal-body rod protein (flgC) [Borrelia burgdorferi B31]
 gi|215981409|gb|EEC22216.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 156a]
 gi|218164496|gb|ACK74557.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi ZS7]
 gi|221192348|gb|EEE18567.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 72a]
 gi|223885752|gb|EEF56851.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 64b]
 gi|224511918|gb|EEF82319.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           WI91-23]
 gi|224512975|gb|EEF83338.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           CA-11.2a]
 gi|225369179|gb|EEG98632.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 118a]
 gi|225370268|gb|EEG99706.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 94a]
 gi|226234013|gb|EEH32734.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 29805]
 gi|312147876|gb|ADQ30535.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi JD1]
 gi|312149272|gb|ADQ29343.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi N40]
          Length = 152

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F   ++       
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVNNPYWKGP 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                       GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|226321611|ref|ZP_03797137.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi Bol26]
 gi|226232800|gb|EEH31553.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi Bol26]
          Length = 152

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F   ++       
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVNNPYWKGP 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                     S GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGISQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|254731831|ref|ZP_05190409.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 4 str.
           292]
 gi|260759600|ref|ZP_05871948.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 4 str.
           292]
 gi|260669918|gb|EEX56858.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 4 str.
           292]
          Length = 140

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/135 (53%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF   +    G+
Sbjct: 4   DALQSTLKIAASGLSTQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGA 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ ++++ T+DLLR
Sbjct: 124 RQARELISMTIDLLR 138


>gi|296447440|ref|ZP_06889365.1| flagellar basal-body rod protein FlgC [Methylosinus trichosporium
           OB3b]
 gi|296255060|gb|EFH02162.1| flagellar basal-body rod protein FlgC [Methylosinus trichosporium
           OB3b]
          Length = 139

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/136 (50%), Positives = 96/136 (70%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L AS  IA SGL+ QSAR+++++EN+ANA++   T G  PY RKTISF+  +  + G
Sbjct: 1   MDPLQASMKIAGSGLSAQSARLRVVAENMANAQSVAKTAGGAPYSRKTISFQSEVDRASG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V  IGVD++ F  E DPG+P A+  G VKYPNVN++ E ADMRE NR Y AN+Q 
Sbjct: 61  ASLVQVGPIGVDRAPFRVEHDPGNPAADTDGYVKYPNVNLMTEVADMREANRSYEANVQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ+ ++ + T+DLL+
Sbjct: 121 MKQTRELFSMTIDLLK 136


>gi|325291941|ref|YP_004277805.1| flagellar basal body rod protein FlgC [Agrobacterium sp. H13-3]
 gi|325059794|gb|ADY63485.1| flagellar basal body rod protein FlgC [Agrobacterium sp. H13-3]
          Length = 139

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 82/136 (60%), Positives = 107/136 (78%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A++ IA SGL VQS R++I+SENIANAR+TGDTPG+DPYRRKT++F   +    G
Sbjct: 1   MDPLSAASKIAGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDRVSG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V+   VKK+GVD+  FV E+DPG+P A+ SG+VK PNVNVL+E ADMRE NR Y ANLQ 
Sbjct: 61  VQRVTVKKLGVDRGDFVHEYDPGNPAADTSGMVKMPNVNVLIEMADMREANRSYDANLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I+Q+ D++ +T+DLL+
Sbjct: 121 IRQTRDLVASTIDLLK 136


>gi|307310148|ref|ZP_07589798.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|306909866|gb|EFN40360.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|315060352|gb|ADT74679.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli W]
 gi|320200970|gb|EFW75554.1| Flagellar basal-body rod protein FlgC [Escherichia coli EC4100B]
 gi|323379087|gb|ADX51355.1| flagellar basal-body rod protein FlgC [Escherichia coli KO11]
          Length = 134

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSQRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVNAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   QS     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVADVIESQSPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|302878274|ref|YP_003846838.1| flagellar basal-body rod protein FlgC [Gallionella
           capsiferriformans ES-2]
 gi|302581063|gb|ADL55074.1| flagellar basal-body rod protein FlgC [Gallionella
           capsiferriformans ES-2]
          Length = 134

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L    ++A SG+A QS R+ +++ N+ANA +T       PYR K + F     GS    G
Sbjct: 3   LFNIFNVAGSGMAAQSQRLNVVASNLANADSTTGA-DGKPYRAKQVVFSATPMGSTDVQG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++  D S     +DP HP+A+A G V  PNVNV+ E  +M   +R Y  N+  +  
Sbjct: 62  VKVVRVAEDTSPMKIVYDPKHPMADAKGYVSMPNVNVVDEMVNMISASRAYQNNVDVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           S  ++  TL + +
Sbjct: 122 SKTLLLKTLTIGQ 134


>gi|53717912|ref|YP_106898.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           K96243]
 gi|53724563|ref|YP_104796.1| flagellar basal body rod protein FlgC [Burkholderia mallei ATCC
           23344]
 gi|76809289|ref|YP_331878.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           1710b]
 gi|121599639|ref|YP_994289.1| flagellar basal body rod protein FlgC [Burkholderia mallei SAVP1]
 gi|124385719|ref|YP_001028062.1| flagellar basal body rod protein FlgC [Burkholderia mallei NCTC
           10229]
 gi|126439110|ref|YP_001057320.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|126450357|ref|YP_001082869.1| flagellar basal body rod protein FlgC [Burkholderia mallei NCTC
           10247]
 gi|126454889|ref|YP_001064562.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           1106a]
 gi|134283634|ref|ZP_01770333.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|167001534|ref|ZP_02267329.1| flagellar basal-body rod protein FlgC [Burkholderia mallei PRL-20]
 gi|167717658|ref|ZP_02400894.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           DM98]
 gi|167736701|ref|ZP_02409475.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           14]
 gi|167813799|ref|ZP_02445479.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           91]
 gi|167822316|ref|ZP_02453787.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei 9]
 gi|167843906|ref|ZP_02469414.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           B7210]
 gi|167892408|ref|ZP_02479810.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           7894]
 gi|167900906|ref|ZP_02488111.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           NCTC 13177]
 gi|167909125|ref|ZP_02496216.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           112]
 gi|167917162|ref|ZP_02504253.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           BCC215]
 gi|217424916|ref|ZP_03456412.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           576]
 gi|226199800|ref|ZP_03795351.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810459|ref|YP_002894910.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           MSHR346]
 gi|238562527|ref|ZP_00440313.2| flagellar basal-body rod protein FlgC [Burkholderia mallei GB8
           horse 4]
 gi|242316173|ref|ZP_04815189.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1106b]
 gi|254174790|ref|ZP_04881451.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
           10399]
 gi|254182142|ref|ZP_04888739.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1655]
 gi|254188072|ref|ZP_04894584.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254197006|ref|ZP_04903430.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           S13]
 gi|254201894|ref|ZP_04908258.1| flagellar basal-body rod protein FlgC [Burkholderia mallei FMH]
 gi|254207228|ref|ZP_04913579.1| flagellar basal-body rod protein FlgC [Burkholderia mallei JHU]
 gi|254258642|ref|ZP_04949696.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1710a]
 gi|254295812|ref|ZP_04963269.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
 gi|254359730|ref|ZP_04976001.1| flagellar basal-body rod protein FlgC [Burkholderia mallei
           2002721280]
 gi|42766726|gb|AAS45446.1| putative flagellar biosynthesis protein [Burkholderia pseudomallei]
 gi|52208326|emb|CAH34259.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243]
 gi|52427986|gb|AAU48579.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
           23344]
 gi|76578742|gb|ABA48217.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1710b]
 gi|121228449|gb|ABM50967.1| flagellar basal-body rod protein FlgC [Burkholderia mallei SAVP1]
 gi|124293739|gb|ABN03008.1| flagellar basal-body rod protein FlgC [Burkholderia mallei NCTC
           10229]
 gi|126218603|gb|ABN82109.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|126228531|gb|ABN92071.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1106a]
 gi|126243227|gb|ABO06320.1| flagellar basal-body rod protein FlgC [Burkholderia mallei NCTC
           10247]
 gi|134245043|gb|EBA45138.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|147747788|gb|EDK54864.1| flagellar basal-body rod protein FlgC [Burkholderia mallei FMH]
 gi|147752770|gb|EDK59836.1| flagellar basal-body rod protein FlgC [Burkholderia mallei JHU]
 gi|148028944|gb|EDK86876.1| flagellar basal-body rod protein FlgC [Burkholderia mallei
           2002721280]
 gi|157805705|gb|EDO82875.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
 gi|157935752|gb|EDO91422.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160695835|gb|EDP85805.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
           10399]
 gi|169653749|gb|EDS86442.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           S13]
 gi|184212680|gb|EDU09723.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1655]
 gi|217391936|gb|EEC31962.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           576]
 gi|225928151|gb|EEH24187.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504017|gb|ACQ96335.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           MSHR346]
 gi|238522487|gb|EEP85931.1| flagellar basal-body rod protein FlgC [Burkholderia mallei GB8
           horse 4]
 gi|242139412|gb|EES25814.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1106b]
 gi|243062736|gb|EES44922.1| flagellar basal-body rod protein FlgC [Burkholderia mallei PRL-20]
 gi|254217331|gb|EET06715.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1710a]
          Length = 141

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S ++ QS R+ + + N+ANA +    P   PY+ K + F         
Sbjct: 1   MPSLMNIFDVAGSAMSAQSQRLNVTASNLANADSV-TGPDGKPYKAKQVVFATAPMGRAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGV+V K+  D S     +DP +P A+ +G V  PNV+ + E  +M   +R Y
Sbjct: 60  TASGQGVGGVQVSKVIDDPSPMKTAYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKQLMLKTLTIG 140


>gi|317129211|ref|YP_004095493.1| flagellar basal-body rod protein FlgC [Bacillus cellulosilyticus
           DSM 2522]
 gi|315474159|gb|ADU30762.1| flagellar basal-body rod protein FlgC [Bacillus cellulosilyticus
           DSM 2522]
          Length = 148

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 16/146 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG--- 57
           +    + + S L  Q  RM ++S N+ANA TT          PYRRK +  E+   G   
Sbjct: 3   IFHGINTSASALTAQRLRMDVVSSNMANADTTRARLVDGEWQPYRRKMVVLEQNGSGFSS 62

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+V++I  D++ F   F P HP AN  G V+ PNV+ L E  D+   
Sbjct: 63  HLDKAMGKTHGNGVKVREIVEDETPFRLVFQPDHPDANEDGYVELPNVDPLKEMIDLMSA 122

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+ T+    +M+   L++ R
Sbjct: 123 TRSYEANVTTLDAHKNMLLKALEIGR 148


>gi|293409440|ref|ZP_06653016.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
 gi|291469908|gb|EFF12392.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
          Length = 134

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSQRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVNAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVGDVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|317052365|ref|YP_004113481.1| flagellar basal-body rod protein FlgC [Desulfurispirillum indicum
           S5]
 gi|316947449|gb|ADU66925.1| flagellar basal-body rod protein FlgC [Desulfurispirillum indicum
           S5]
          Length = 151

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 49/149 (32%), Positives = 65/149 (43%), Gaps = 20/149 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
                 I++S L  Q  RM +IS N+ANA TT        Y+RK + F            
Sbjct: 3   FFDGLKISSSALFAQRQRMNVISSNLANAHTTR-AEDGTYYKRKDLVFKPQTIHDDVRGK 61

Query: 52  -------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                  E       GVRV+ I  D    + ++DP HP A+  G V YPN+NV+ E  DM
Sbjct: 62  IFPASFEEAWKKKIEGVRVEAIIEDDEPPILKYDPSHPDADEEGYVAYPNINVVEEMTDM 121

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +R Y AN+  I+    M    L L R
Sbjct: 122 ITASRSYEANITMIETIKKMANEALGLGR 150


>gi|121602485|ref|YP_989402.1| flagellar basal body rod protein FlgC [Bartonella bacilliformis
           KC583]
 gi|120614662|gb|ABM45263.1| flagellar basal-body rod protein FlgC [Bartonella bacilliformis
           KC583]
          Length = 137

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/135 (50%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---S 58
           D L+ +  ++ +GL  QS R++II+EN+ANA +TG  PG+ PYRRKT+SFE  ++    +
Sbjct: 3   DPLMIAERVSTTGLGAQSTRLRIIAENLANANSTGRAPGAAPYRRKTVSFETALNPYVDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV VK+IGVD++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVKRIGVDKAPFIMRYEPGHLAADSNGYVKYPNVNAVIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q  D+++ T+DLL+
Sbjct: 123 RQVRDLVSQTIDLLK 137


>gi|111115118|ref|YP_709736.1| flagellar basal body rod protein FlgC [Borrelia afzelii PKo]
 gi|110890392|gb|ABH01560.1| flagellar basal-body rod protein [Borrelia afzelii PKo]
          Length = 152

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F   ++       
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVNNPYWKGP 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                       GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  D
Sbjct: 62  FVPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|123442786|ref|YP_001006763.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|332161320|ref|YP_004297897.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|2494525|sp|Q56894|FLGC_YEREN RecName: Full=Flagellar basal-body rod protein flgC
 gi|793899|emb|CAA88193.1| flgC [Yersinia enterocolitica]
 gi|122089747|emb|CAL12600.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|325665550|gb|ADZ42194.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860608|emb|CBX70905.1| flagellar basal-body rod protein flgC [Yersinia enterocolitica
           W22703]
          Length = 134

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           L+    IA S L+ QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALSAQSQRLNVSASNMANADSV-TGPDGQPYRAKQVVFQVAAQPGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV +I  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  
Sbjct: 62  VRVAQIIDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMLKTLTLGQ 134


>gi|86356310|ref|YP_468202.1| flagellar basal body rod protein FlgC [Rhizobium etli CFN 42]
 gi|86280412|gb|ABC89475.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
          Length = 138

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 83/136 (61%), Positives = 106/136 (77%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRTSG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+A G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADAKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I+Q+ D++++T+DLL+
Sbjct: 121 IRQTRDLISSTIDLLK 136


>gi|167568105|ref|ZP_02361021.1| flagellar basal body rod protein FlgC [Burkholderia oklahomensis
           EO147]
 gi|167574223|ref|ZP_02367097.1| flagellar basal body rod protein FlgC [Burkholderia oklahomensis
           C6786]
          Length = 141

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S ++ QS R+ + + N+ANA +    P   PY+ K + F         
Sbjct: 1   MPSLMNIFDVAGSAMSAQSQRLNVTASNLANADSV-TGPDGKPYKAKQVVFATAPMGRAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGV+V K+  D S     +DP +P A+ +G V  PNV+ + E  +M   +R Y
Sbjct: 60  TASGQGVGGVQVTKVIDDPSPMKTAYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKQLMLKTLTIG 140


>gi|310641541|ref|YP_003946299.1| flagellar basal-body rod protein flgc [Paenibacillus polymyxa SC2]
 gi|309246491|gb|ADO56058.1| Flagellar basal-body rod protein FlgC [Paenibacillus polymyxa SC2]
          Length = 150

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 70/146 (47%), Gaps = 18/146 (12%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTISFEEVMHG----- 57
               I+ S L  Q  RM +IS NIANA TT     +    PYRRKT+  E    G     
Sbjct: 5   NGFDISASALTAQRLRMDVISSNIANAETTRAKVENGQAIPYRRKTVVLEPNQSGFADVL 64

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                     + GV+V +I  DQS     ++PGHP A+  G V  PNV+++ E  DM   
Sbjct: 65  KAQMEGSSTSAAGVKVSQIQEDQSPLKPVYNPGHPDADKDGYVYMPNVDIMKEMVDMISA 124

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+  +  S  M++  L++ R
Sbjct: 125 TRSYEANVTALNASKAMVSKALEIGR 150


>gi|186477695|ref|YP_001859165.1| flagellar basal body rod protein FlgC [Burkholderia phymatum
           STM815]
 gi|184194154|gb|ACC72119.1| flagellar basal-body rod protein FlgC [Burkholderia phymatum
           STM815]
          Length = 141

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+   ++A S ++ QS R+ + + N+ANA +T   P   PY+ K + F         
Sbjct: 1   MPSLMNIFNVAGSAMSAQSQRLNVTASNLANADST-TGPDGKPYKAKQVVFAVNPIGGAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  GGV+V  +  D +     ++PG+P A+A+G V+ PNV+ + E  +M   +R Y
Sbjct: 60  TGSGQQVGGVQVTGVIDDPTPMKTSYEPGNPAADANGYVQLPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKQLMLKTLTIG 140


>gi|163856433|ref|YP_001630731.1| flagellar basal body rod protein FlgC [Bordetella petrii DSM 12804]
 gi|163260161|emb|CAP42463.1| flagellar basal-body rod protein FlgC [Bordetella petrii]
          Length = 139

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L +   IA S L  QS RM + + N+ANA +    P   PYR + + F+           
Sbjct: 3   LTSIFDIAGSALQAQSQRMNVSASNLANADSAVG-PDGQPYRARQVVFQVNPPAGQAYGR 61

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GGVRV  +  D S     +DP HP+AN  G V  PNV+ + ET +M   +R Y AN++
Sbjct: 62  EIGGVRVAGVVQDPSPPKLIYDPSHPLANPQGYVTMPNVDPVAETVNMIAASRSYQANVE 121

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  +M  TL L +
Sbjct: 122 VLNTAKQLMMKTLTLGQ 138


>gi|114706769|ref|ZP_01439669.1| flagellar basal-body rod protein C [Fulvimarina pelagi HTCC2506]
 gi|114537717|gb|EAU40841.1| flagellar basal-body rod protein C [Fulvimarina pelagi HTCC2506]
          Length = 138

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/135 (51%), Positives = 96/135 (71%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L++S  IA SG+  QS R++++SEN+ANA TTGDTPG+DPY RKT++F   +    G+
Sbjct: 3   DPLVSSLKIAASGMEAQSTRLRVVSENVANAETTGDTPGADPYVRKTVTFGATLDEVTGA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV  IG D++ F   +DPG+P A+ +G VK PNVN+L E  DMRE NR Y AN+Q I
Sbjct: 63  NLVRVTDIGTDKADFESTYDPGNPAADENGYVKRPNVNMLTEMMDMREANRSYEANIQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           KQ+ +++  T+DLLR
Sbjct: 123 KQAREIINMTIDLLR 137


>gi|306820111|ref|ZP_07453759.1| flagellar basal-body rod protein FlgC [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551889|gb|EFM39832.1| flagellar basal-body rod protein FlgC [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 145

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 51/144 (35%), Positives = 72/144 (50%), Gaps = 15/144 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           + +  +I  + L  +  RM IIS+NIANA+TT    G  PY+R+   F+E    S     
Sbjct: 3   IFSGMNINATALTAERLRMDIISKNIANAQTTRTKNG-LPYKRQVAVFKEAEGDSSFKSV 61

Query: 59  ---------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                    GGV V  I  D+S F   +DPGHP A+ +G VK PNV ++ E  DM    R
Sbjct: 62  LENKRKKDTGGVEVVGIVEDKSDFKLRYDPGHPDADENGYVKMPNVELITEMVDMITAQR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN   +  S  M+   +D+ +
Sbjct: 122 AYEANATAVNTSKAMLQKAIDIGK 145


>gi|320354315|ref|YP_004195654.1| flagellar basal-body rod protein FlgC [Desulfobulbus propionicus
           DSM 2032]
 gi|320122817|gb|ADW18363.1| flagellar basal-body rod protein FlgC [Desulfobulbus propionicus
           DSM 2032]
          Length = 145

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 73/146 (50%), Gaps = 16/146 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           MD +  +  IA SGL  Q+ R+  IS N+AN+ TT  TP   PY++K++ F+        
Sbjct: 1   MD-IFTTFDIAASGLKAQTMRLNTISANLANSETT-STPEGGPYKKKSVVFQTENLPFKQ 58

Query: 54  -------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                      + GV+V KI  D S     +DP HP A   G V+ PNVNVL E  DM  
Sbjct: 59  HLNNSLLAQGQAQGVKVAKIIEDTSEPQRVYDPTHPDAKEDGYVEMPNVNVLKEMVDMMS 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLL 132
           T R Y AN  TIK +  M    LD+ 
Sbjct: 119 TTRSYEANTTTIKSAKRMAMRALDIG 144


>gi|238785499|ref|ZP_04629482.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
 gi|238799105|ref|ZP_04642561.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
 gi|238713601|gb|EEQ05630.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
 gi|238717052|gb|EEQ08912.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
          Length = 134

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           L+    IA S L+ QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALSAQSQRLNVSASNMANADSV-TGPDGQPYRAKQVVFQVAAQPGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  
Sbjct: 62  VRVSQVVDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMLKTLTLGQ 134


>gi|222100200|ref|YP_002534768.1| Flagellar basal-body rod protein FlgC [Thermotoga neapolitana DSM
           4359]
 gi|221572590|gb|ACM23402.1| Flagellar basal-body rod protein FlgC [Thermotoga neapolitana DSM
           4359]
          Length = 139

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 8/136 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
               +I+ +G++ Q  R++I+S NIANA TT  T   +PYRRK   F E +         
Sbjct: 4   FDIMNISATGMSAQRLRVEIVSTNIANAETTR-TEMGEPYRRKVPVFAEYLRRAKDGRIE 62

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           S GV+V KI  D S F   +DP HP A+ +G V+ PNVN++ E  D+    R Y AN+  
Sbjct: 63  SAGVKVVKIVEDPSPFRLVYDPTHPDADENGYVRMPNVNIVREMVDLINAQRAYDANVAA 122

Query: 118 IKQSHDMMTTTLDLLR 133
              + +M+ + L + R
Sbjct: 123 FNVTKNMVNSALQIGR 138


>gi|15801191|ref|NP_287208.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           EDL933]
 gi|15830706|ref|NP_309479.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. Sakai]
 gi|16129037|ref|NP_415592.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|26247214|ref|NP_753254.1| flagellar basal body rod protein FlgC [Escherichia coli CFT073]
 gi|74311636|ref|YP_310055.1| flagellar basal body rod protein FlgC [Shigella sonnei Ss046]
 gi|82544460|ref|YP_408407.1| flagellar basal body rod protein FlgC [Shigella boydii Sb227]
 gi|89107920|ref|AP_001700.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. W3110]
 gi|91210226|ref|YP_540212.1| flagellar basal body rod protein FlgC [Escherichia coli UTI89]
 gi|110641250|ref|YP_668980.1| flagellar basal body rod protein FlgC [Escherichia coli 536]
 gi|117623260|ref|YP_852173.1| flagellar basal body rod protein FlgC [Escherichia coli APEC O1]
 gi|157158527|ref|YP_001462308.1| flagellar basal body rod protein FlgC [Escherichia coli E24377A]
 gi|157160601|ref|YP_001457919.1| flagellar basal body rod protein FlgC [Escherichia coli HS]
 gi|168747150|ref|ZP_02772172.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4113]
 gi|168758634|ref|ZP_02783641.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4401]
 gi|168764486|ref|ZP_02789493.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4501]
 gi|168767733|ref|ZP_02792740.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4486]
 gi|168773919|ref|ZP_02798926.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4196]
 gi|168783604|ref|ZP_02808611.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4076]
 gi|168790009|ref|ZP_02815016.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC869]
 gi|168802019|ref|ZP_02827026.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC508]
 gi|170020530|ref|YP_001725484.1| flagellar basal body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|170080725|ref|YP_001730045.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187733039|ref|YP_001880754.1| flagellar basal body rod protein FlgC [Shigella boydii CDC 3083-94]
 gi|188493209|ref|ZP_03000479.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|191168455|ref|ZP_03030243.1| flagellar basal-body rod protein FlgC [Escherichia coli B7A]
 gi|191172415|ref|ZP_03033956.1| flagellar basal-body rod protein FlgC [Escherichia coli F11]
 gi|193064524|ref|ZP_03045604.1| flagellar basal-body rod protein FlgC [Escherichia coli E22]
 gi|194428485|ref|ZP_03061025.1| flagellar basal-body rod protein FlgC [Escherichia coli B171]
 gi|194437997|ref|ZP_03070090.1| flagellar basal-body rod protein FlgC [Escherichia coli 101-1]
 gi|195935464|ref|ZP_03080846.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. EC4024]
 gi|208806183|ref|ZP_03248520.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4206]
 gi|208816163|ref|ZP_03257342.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4045]
 gi|208822529|ref|ZP_03262848.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4042]
 gi|209400948|ref|YP_002269920.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4115]
 gi|209918328|ref|YP_002292412.1| flagellar basal body rod protein FlgC [Escherichia coli SE11]
 gi|215486283|ref|YP_002328714.1| flagellar basal body rod protein FlgC [Escherichia coli O127:H6
           str. E2348/69]
 gi|217328457|ref|ZP_03444539.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. TW14588]
 gi|218553653|ref|YP_002386566.1| flagellar basal body rod protein FlgC [Escherichia coli IAI1]
 gi|218557956|ref|YP_002390869.1| flagellar basal body rod protein FlgC [Escherichia coli S88]
 gi|218689027|ref|YP_002397239.1| flagellar basal body rod protein FlgC [Escherichia coli ED1a]
 gi|218694608|ref|YP_002402275.1| flagellar basal body rod protein FlgC [Escherichia coli 55989]
 gi|218700423|ref|YP_002408052.1| flagellar basal body rod protein FlgC [Escherichia coli IAI39]
 gi|218704482|ref|YP_002412001.1| flagellar basal body rod protein FlgC [Escherichia coli UMN026]
 gi|227886568|ref|ZP_04004373.1| flagellar basal body rod protein FlgC [Escherichia coli 83972]
 gi|237706940|ref|ZP_04537421.1| flagellar rod protein FlgC [Escherichia sp. 3_2_53FAA]
 gi|238900328|ref|YP_002926124.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|253773902|ref|YP_003036733.1| flagellar basal body rod protein FlgC [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161180|ref|YP_003044288.1| flagellar basal body rod protein FlgC [Escherichia coli B str.
           REL606]
 gi|254792456|ref|YP_003077293.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. TW14359]
 gi|256018669|ref|ZP_05432534.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
 gi|256023228|ref|ZP_05437093.1| flagellar basal body rod protein FlgC [Escherichia sp. 4_1_40B]
 gi|260843314|ref|YP_003221092.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|260854557|ref|YP_003228448.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|260867437|ref|YP_003233839.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|261227021|ref|ZP_05941302.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256255|ref|ZP_05948788.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282094|ref|YP_003498912.1| Cell-proximal portion of basal-body rod [Escherichia coli O55:H7
           str. CB9615]
 gi|293404358|ref|ZP_06648352.1| flgC [Escherichia coli FVEC1412]
 gi|293414369|ref|ZP_06657018.1| flagellar basal-body rod protein FlgC [Escherichia coli B185]
 gi|293433364|ref|ZP_06661792.1| flagellar basal-body rod protein FlgC [Escherichia coli B088]
 gi|298380138|ref|ZP_06989743.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|300816776|ref|ZP_07096996.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|300821145|ref|ZP_07101294.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 119-7]
 gi|300899593|ref|ZP_07117832.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
 gi|300902465|ref|ZP_07120447.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 84-1]
 gi|300918676|ref|ZP_07135257.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 115-1]
 gi|300922600|ref|ZP_07138700.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 182-1]
 gi|300928374|ref|ZP_07143908.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 187-1]
 gi|300938639|ref|ZP_07153368.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
 gi|300950169|ref|ZP_07164114.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 116-1]
 gi|300954386|ref|ZP_07166840.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 175-1]
 gi|300974378|ref|ZP_07172590.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 45-1]
 gi|300982623|ref|ZP_07176207.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 200-1]
 gi|301023261|ref|ZP_07187058.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 69-1]
 gi|301029711|ref|ZP_07192765.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 196-1]
 gi|301051142|ref|ZP_07197972.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 185-1]
 gi|301304987|ref|ZP_07211089.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 124-1]
 gi|301328556|ref|ZP_07221617.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 78-1]
 gi|301644986|ref|ZP_07244952.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|306814077|ref|ZP_07448250.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
 gi|307137709|ref|ZP_07497065.1| flagellar basal body rod protein FlgC [Escherichia coli H736]
 gi|309798068|ref|ZP_07692443.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 145-7]
 gi|312968852|ref|ZP_07783059.1| flagellar basal-body rod protein FlgC [Escherichia coli 2362-75]
 gi|312971211|ref|ZP_07785389.1| flagellar basal-body rod protein FlgC [Escherichia coli 1827-70]
 gi|331641618|ref|ZP_08342753.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
 gi|331646332|ref|ZP_08347435.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331652127|ref|ZP_08353146.1| flagellar basal-body rod protein FlgC [Escherichia coli M718]
 gi|331657136|ref|ZP_08358098.1| flagellar basal-body rod protein FlgC [Escherichia coli TA206]
 gi|331662480|ref|ZP_08363403.1| flagellar basal-body rod protein FlgC [Escherichia coli TA143]
 gi|331667474|ref|ZP_08368338.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331672594|ref|ZP_08373383.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
 gi|331676865|ref|ZP_08377561.1| flagellar basal-body rod protein FlgC [Escherichia coli H591]
 gi|331682576|ref|ZP_08383195.1| flagellar basal-body rod protein FlgC [Escherichia coli H299]
 gi|332279738|ref|ZP_08392151.1| flagellar rod protein FlgC [Shigella sp. D9]
 gi|78100011|sp|P0ABX4|FLGC_ECO57 RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|78100012|sp|P0ABX3|FLGC_ECOL6 RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|78100013|sp|P0ABX2|FLGC_ECOLI RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|12514612|gb|AAG55820.1|AE005317_9 flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. EDL933]
 gi|26107615|gb|AAN79814.1|AE016759_88 Flagellar basal-body rod protein flgC [Escherichia coli CFT073]
 gi|1787314|gb|AAC74158.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062651|dbj|BAA35882.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K12 substr. W3110]
 gi|13360916|dbj|BAB34875.1| flagellar rod protein FlgC [Escherichia coli O157:H7 str. Sakai]
 gi|73855113|gb|AAZ87820.1| flagellar protein for cell-proximal portion of basal-body rod
           [Shigella sonnei Ss046]
 gi|81245871|gb|ABB66579.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
 gi|91071800|gb|ABE06681.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Escherichia coli UTI89]
 gi|110342842|gb|ABG69079.1| flagellar basal-body rod protein FlgC [Escherichia coli 536]
 gi|115512384|gb|ABJ00459.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli APEC O1]
 gi|157066281|gb|ABV05536.1| flagellar basal-body rod protein FlgC [Escherichia coli HS]
 gi|157080557|gb|ABV20265.1| flagellar basal-body rod protein FlgC [Escherichia coli E24377A]
 gi|169755458|gb|ACA78157.1| flagellar basal-body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|169888560|gb|ACB02267.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187430031|gb|ACD09305.1| flagellar basal-body rod protein FlgC [Shigella boydii CDC 3083-94]
 gi|187770492|gb|EDU34336.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4196]
 gi|188017999|gb|EDU56121.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4113]
 gi|188488408|gb|EDU63511.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|188999102|gb|EDU68088.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4076]
 gi|189354569|gb|EDU72988.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4401]
 gi|189363308|gb|EDU81727.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4486]
 gi|189365512|gb|EDU83928.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4501]
 gi|189370511|gb|EDU88927.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC869]
 gi|189375937|gb|EDU94353.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC508]
 gi|190901474|gb|EDV61235.1| flagellar basal-body rod protein FlgC [Escherichia coli B7A]
 gi|190907299|gb|EDV66897.1| flagellar basal-body rod protein FlgC [Escherichia coli F11]
 gi|192927776|gb|EDV82390.1| flagellar basal-body rod protein FlgC [Escherichia coli E22]
 gi|194413537|gb|EDX29819.1| flagellar basal-body rod protein FlgC [Escherichia coli B171]
 gi|194422933|gb|EDX38927.1| flagellar basal-body rod protein FlgC [Escherichia coli 101-1]
 gi|208725984|gb|EDZ75585.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4206]
 gi|208732811|gb|EDZ81499.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4045]
 gi|208738014|gb|EDZ85697.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4042]
 gi|209162348|gb|ACI39781.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4115]
 gi|209773398|gb|ACI85011.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773400|gb|ACI85012.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773402|gb|ACI85013.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773404|gb|ACI85014.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773406|gb|ACI85015.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209911587|dbj|BAG76661.1| flagellar basal-body rod protein FlgC [Escherichia coli SE11]
 gi|215264355|emb|CAS08712.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217318884|gb|EEC27310.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. TW14588]
 gi|218351340|emb|CAU97046.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli 55989]
 gi|218360421|emb|CAQ97973.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI1]
 gi|218364725|emb|CAR02415.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli S88]
 gi|218370409|emb|CAR18216.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI39]
 gi|218426591|emb|CAR07419.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli ED1a]
 gi|218431579|emb|CAR12458.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli UMN026]
 gi|222032827|emb|CAP75566.1| flagellar basal-body rod protein flgC [Escherichia coli LF82]
 gi|226898150|gb|EEH84409.1| flagellar rod protein FlgC [Escherichia sp. 3_2_53FAA]
 gi|227836772|gb|EEJ47238.1| flagellar basal body rod protein FlgC [Escherichia coli 83972]
 gi|238861102|gb|ACR63100.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|242376878|emb|CAQ31595.1| flagellar basal-body rod protein FlgC, subunit of Flagellar Motor
           Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324946|gb|ACT29548.1| flagellar basal-body rod protein FlgC [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973081|gb|ACT38752.1| flagellar basal-body rod protein C [Escherichia coli B str. REL606]
 gi|253977295|gb|ACT42965.1| flagellar basal-body rod protein C [Escherichia coli BL21(DE3)]
 gi|254591856|gb|ACT71217.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. TW14359]
 gi|257753206|dbj|BAI24708.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|257758461|dbj|BAI29958.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|257763793|dbj|BAI35288.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|260449786|gb|ACX40208.1| flagellar basal-body rod protein FlgC [Escherichia coli DH1]
 gi|281178183|dbj|BAI54513.1| flagellar basal-body rod protein FlgC [Escherichia coli SE15]
 gi|284920897|emb|CBG33960.1| flagellar basal-body rod protein FlgC [Escherichia coli 042]
 gi|290761967|gb|ADD55928.1| Cell-proximal portion of basal-body rod [Escherichia coli O55:H7
           str. CB9615]
 gi|291324183|gb|EFE63605.1| flagellar basal-body rod protein FlgC [Escherichia coli B088]
 gi|291428944|gb|EFF01969.1| flgC [Escherichia coli FVEC1412]
 gi|291434427|gb|EFF07400.1| flagellar basal-body rod protein FlgC [Escherichia coli B185]
 gi|294493232|gb|ADE91988.1| flagellar basal-body rod protein FlgC [Escherichia coli IHE3034]
 gi|298279836|gb|EFI21344.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|299877399|gb|EFI85610.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 196-1]
 gi|300297163|gb|EFJ53548.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 185-1]
 gi|300307088|gb|EFJ61608.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 200-1]
 gi|300318622|gb|EFJ68406.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 175-1]
 gi|300356864|gb|EFJ72734.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
 gi|300397106|gb|EFJ80644.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 69-1]
 gi|300405497|gb|EFJ89035.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 84-1]
 gi|300410621|gb|EFJ94159.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 45-1]
 gi|300414170|gb|EFJ97480.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 115-1]
 gi|300421077|gb|EFK04388.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 182-1]
 gi|300450516|gb|EFK14136.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 116-1]
 gi|300456424|gb|EFK19917.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
 gi|300463632|gb|EFK27125.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 187-1]
 gi|300526444|gb|EFK47513.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 119-7]
 gi|300530550|gb|EFK51612.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|300839705|gb|EFK67465.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 124-1]
 gi|300844948|gb|EFK72708.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 78-1]
 gi|301076715|gb|EFK91521.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|305852714|gb|EFM53162.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
 gi|307553076|gb|ADN45851.1| flagellar basal-body rod protein FlgC [Escherichia coli ABU 83972]
 gi|307627456|gb|ADN71760.1| flagellar basal body rod protein FlgC [Escherichia coli UM146]
 gi|308118351|gb|EFO55613.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 145-7]
 gi|309701346|emb|CBJ00647.1| flagellar basal-body rod protein FlgC [Escherichia coli ETEC
           H10407]
 gi|310336413|gb|EFQ01599.1| flagellar basal-body rod protein FlgC [Escherichia coli 1827-70]
 gi|312286254|gb|EFR14167.1| flagellar basal-body rod protein FlgC [Escherichia coli 2362-75]
 gi|312945636|gb|ADR26463.1| flagellar basal body rod protein FlgC [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|315135706|dbj|BAJ42865.1| cell-proximal portion of basal-body rod [Escherichia coli DH1]
 gi|315253875|gb|EFU33843.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 85-1]
 gi|315287371|gb|EFU46782.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 110-3]
 gi|315291068|gb|EFU50431.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 153-1]
 gi|315296705|gb|EFU56000.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 16-3]
 gi|315618244|gb|EFU98834.1| flagellar basal-body rod protein FlgC [Escherichia coli 3431]
 gi|320179226|gb|EFW54184.1| Flagellar basal-body rod protein FlgC [Shigella boydii ATCC 9905]
 gi|320186979|gb|EFW61692.1| Flagellar basal-body rod protein FlgC [Shigella flexneri CDC
           796-83]
 gi|320189757|gb|EFW64413.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC1212]
 gi|320196444|gb|EFW71067.1| Flagellar basal-body rod protein FlgC [Escherichia coli WV_060327]
 gi|320637525|gb|EFX07325.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. G5101]
 gi|320643086|gb|EFX12287.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H-
           str. 493-89]
 gi|320648544|gb|EFX17199.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H-
           str. H 2687]
 gi|320653858|gb|EFX21932.1| flagellar basal body rod protein FlgC [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659338|gb|EFX26907.1| flagellar basal body rod protein FlgC [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320664473|gb|EFX31624.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. LSU-61]
 gi|323156881|gb|EFZ43015.1| flagellar basal-body rod protein FlgC [Escherichia coli EPECa14]
 gi|323163756|gb|EFZ49575.1| flagellar basal-body rod protein FlgC [Escherichia coli E128010]
 gi|323174797|gb|EFZ60412.1| flagellar basal-body rod protein FlgC [Escherichia coli LT-68]
 gi|323175695|gb|EFZ61289.1| flagellar basal-body rod protein FlgC [Escherichia coli 1180]
 gi|323185803|gb|EFZ71164.1| flagellar basal-body rod protein FlgC [Escherichia coli 1357]
 gi|323190586|gb|EFZ75858.1| flagellar basal-body rod protein FlgC [Escherichia coli RN587/1]
 gi|323937814|gb|EGB34078.1| flagellar basal-body rod protein FlgC [Escherichia coli E1520]
 gi|323942543|gb|EGB38710.1| flagellar basal-body rod protein FlgC [Escherichia coli E482]
 gi|323947624|gb|EGB43628.1| flagellar basal-body rod protein FlgC [Escherichia coli H120]
 gi|323953240|gb|EGB49106.1| flagellar basal-body rod protein FlgC [Escherichia coli H252]
 gi|323957898|gb|EGB53610.1| flagellar basal-body rod protein FlgC [Escherichia coli H263]
 gi|323962673|gb|EGB58251.1| flagellar basal-body rod protein FlgC [Escherichia coli H489]
 gi|323967015|gb|EGB62441.1| flagellar basal-body rod protein FlgC [Escherichia coli M863]
 gi|323973337|gb|EGB68526.1| flagellar basal-body rod protein FlgC [Escherichia coli TA007]
 gi|323976553|gb|EGB71641.1| flagellar basal-body rod protein FlgC [Escherichia coli TW10509]
 gi|324007914|gb|EGB77133.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 57-2]
 gi|324013348|gb|EGB82567.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 60-1]
 gi|324017422|gb|EGB86641.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 117-3]
 gi|324117355|gb|EGC11262.1| flagellar basal-body rod protein FlgC [Escherichia coli E1167]
 gi|326339296|gb|EGD63110.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. 1125]
 gi|326344743|gb|EGD68491.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. 1044]
 gi|327253473|gb|EGE65111.1| flagellar basal-body rod protein FlgC [Escherichia coli STEC_7v]
 gi|330910888|gb|EGH39398.1| flagellar basal-body rod protein FlgC [Escherichia coli AA86]
 gi|331038416|gb|EGI10636.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
 gi|331045084|gb|EGI17211.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331050405|gb|EGI22463.1| flagellar basal-body rod protein FlgC [Escherichia coli M718]
 gi|331055384|gb|EGI27393.1| flagellar basal-body rod protein FlgC [Escherichia coli TA206]
 gi|331060902|gb|EGI32866.1| flagellar basal-body rod protein FlgC [Escherichia coli TA143]
 gi|331065059|gb|EGI36954.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331070237|gb|EGI41603.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
 gi|331075554|gb|EGI46852.1| flagellar basal-body rod protein FlgC [Escherichia coli H591]
 gi|331080207|gb|EGI51386.1| flagellar basal-body rod protein FlgC [Escherichia coli H299]
 gi|332094031|gb|EGI99083.1| flagellar basal-body rod protein FlgC [Shigella boydii 3594-74]
 gi|332102090|gb|EGJ05436.1| flagellar rod protein FlgC [Shigella sp. D9]
 gi|332342620|gb|AEE55954.1| flagellar basal-body rod protein FlgC [Escherichia coli UMNK88]
          Length = 134

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSQRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVNAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|238751760|ref|ZP_04613248.1| Flagellar basal-body rod protein flgC [Yersinia rohdei ATCC 43380]
 gi|238710031|gb|EEQ02261.1| Flagellar basal-body rod protein flgC [Yersinia rohdei ATCC 43380]
          Length = 134

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           L+    IA S L+ QS RM + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALSAQSQRMNVSASNMANADSV-TGPDGQPYRAKQVVFQVAAQPGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV +I  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  
Sbjct: 62  VRVAQIVDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMLKTLTLGQ 134


>gi|238758112|ref|ZP_04619292.1| Flagellar basal-body rod protein flgC [Yersinia aldovae ATCC 35236]
 gi|238703650|gb|EEP96187.1| Flagellar basal-body rod protein flgC [Yersinia aldovae ATCC 35236]
          Length = 134

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L+ QS R+ + + N+ANA +    P   PYR K + F+   +    +GG
Sbjct: 3   LLNIFDIAGSALSAQSQRLNVSASNMANAESV-TGPDGQPYRAKQVVFQVAAQAGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV +I  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  
Sbjct: 62  VRVSQIVDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMINTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMLKTLTLGQ 134


>gi|225552253|ref|ZP_03773193.1| flagellar basal-body rod protein FlgC [Borrelia sp. SV1]
 gi|225371251|gb|EEH00681.1| flagellar basal-body rod protein FlgC [Borrelia sp. SV1]
          Length = 152

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L +S ++A++GLA Q  R+ +IS NIAN  +T  TP   PYRR+ I F   ++       
Sbjct: 3   LFSSINVASTGLAAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVNNPYWKGP 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                       GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|167585192|ref|ZP_02377580.1| flagellar basal-body rod protein FlgC [Burkholderia ubonensis Bu]
          Length = 141

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L+    +A S L+ QS R+ + + NIANA +    P   PY+ K + F     G   
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNIANADS-ATGPDGKPYKAKQVVFAADPQGRAR 59

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y
Sbjct: 60  TASGQGVGGVRVAKVIDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKQLMLKTLTIG 140


>gi|308068650|ref|YP_003870255.1| flagellar basal-body rod protein flgC [Paenibacillus polymyxa E681]
 gi|305857929|gb|ADM69717.1| Flagellar basal-body rod protein flgC [Paenibacillus polymyxa E681]
          Length = 150

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 70/146 (47%), Gaps = 18/146 (12%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTISFEEVMHG----- 57
               I+ S L  Q  RM +IS NIANA TT     +    PYRRKT+  E    G     
Sbjct: 5   NGFDISASALTAQRLRMDVISSNIANAETTRAKVENGQAVPYRRKTVVLEPNQSGFADVL 64

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                     + GV+V +I  DQS     ++PGHP A+  G V  PNV+++ E  DM   
Sbjct: 65  KAQMEGSSTSAAGVKVSQIQEDQSPLKPVYNPGHPDADKDGYVYMPNVDIMKEMVDMISA 124

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+  +  S  M++  L++ R
Sbjct: 125 TRSYEANVTALNASKAMVSKALEIGR 150


>gi|157146228|ref|YP_001453547.1| flagellar basal body rod protein FlgC [Citrobacter koseri ATCC
           BAA-895]
 gi|157083433|gb|ABV13111.1| hypothetical protein CKO_01985 [Citrobacter koseri ATCC BAA-895]
          Length = 134

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSKRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVDAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVADVIESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|150395483|ref|YP_001325950.1| flagellar basal body rod protein FlgC [Sinorhizobium medicae
           WSM419]
 gi|150026998|gb|ABR59115.1| flagellar basal-body rod protein FlgC [Sinorhizobium medicae
           WSM419]
          Length = 139

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 77/136 (56%), Positives = 102/136 (75%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L ++  ++ SGL  +S R++I+SENIANAR+TGD PG+DPYRRKTISF   +  + G
Sbjct: 1   MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDAPGTDPYRRKTISFAAEVDRASG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V+++G D S F  EFDPG+P A+  G+VK PNVN+L+E ADMRE NR Y ANLQT
Sbjct: 61  ASLVEVERLGTDDSDFNVEFDPGNPAADEKGMVKLPNVNILIEMADMREANRAYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D+++ T+DLLR
Sbjct: 121 IKQARDLISQTIDLLR 136


>gi|15644117|ref|NP_229166.1| flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8]
 gi|281412855|ref|YP_003346934.1| flagellar basal-body rod protein FlgC [Thermotoga naphthophila
           RKU-10]
 gi|4981925|gb|AAD36435.1|AE001790_7 flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8]
 gi|281373958|gb|ADA67520.1| flagellar basal-body rod protein FlgC [Thermotoga naphthophila
           RKU-10]
          Length = 140

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 8/136 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
               +I+ +G++ Q  R++I+S NIANA TT  T   +PYRRK   F E +         
Sbjct: 5   FEIMNISATGMSAQRLRVEIVSTNIANAETTR-TETGEPYRRKVPVFAEYLRRTPNGKIE 63

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           S GV+V KI  D S F   +DP HP A+ +G V+ PNVN++ E  D+    R Y AN+  
Sbjct: 64  SAGVKVVKIEEDPSPFRLVYDPTHPDADENGYVRMPNVNIVREMVDLINAQRAYDANVAA 123

Query: 118 IKQSHDMMTTTLDLLR 133
              +  M+ + L + R
Sbjct: 124 FNVTKAMVNSALQIGR 139


>gi|296102910|ref|YP_003613056.1| flagellar basal body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057369|gb|ADF62107.1| flagellar basal body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 134

 Score =  187 bits (476), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSKRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVDAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVSDVVESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNSMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|261339374|ref|ZP_05967232.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
 gi|288318175|gb|EFC57113.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
          Length = 134

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSKRLNVAASNLANADSVAG-PDGQPYRAKQVVFQVDAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVSDVVESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNSMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|95929847|ref|ZP_01312588.1| flagellar basal-body rod protein FlgC [Desulfuromonas acetoxidans
           DSM 684]
 gi|95134143|gb|EAT15801.1| flagellar basal-body rod protein FlgC [Desulfuromonas acetoxidans
           DSM 684]
          Length = 143

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 14/145 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           MD +  S +I++S L  Q  R+  IS N+ANA TT  TP   PYRRK + FE        
Sbjct: 1   MD-IFTSLNISSSALKAQRIRLDTISSNMANAETTR-TPEGGPYRRKMVVFEPAQVSFAD 58

Query: 56  -------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GV+V +I  + S     FDP HP AN  G V  PN+++L ET DM    
Sbjct: 59  HLSAKEKKALNGVQVSQIVTEDSEPRLIFDPSHPDANDQGYVALPNIDLLKETTDMMLAT 118

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+ TIK +  M    L++ +
Sbjct: 119 RAYEANITTIKSAKRMALKALEIGK 143


>gi|78067839|ref|YP_370608.1| flagellar basal body rod protein FlgC [Burkholderia sp. 383]
 gi|77968584|gb|ABB09964.1| Flagellar basal-body rod protein FlgC [Burkholderia sp. 383]
          Length = 141

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +    P   PY+ K + F         
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADS-ATGPDGKPYKAKQVVFATDPIGGAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGVRV K+  D S     +DP +P A+++G V+ PNV+ + E  +M   +R Y
Sbjct: 60  TASGQGVGGVRVTKVMDDPSPMKSTYDPSNPAADSNGYVQMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKTLMLKTLTIG 140


>gi|1086559|gb|AAB68966.1| FlgC [Agrobacterium tumefaciens]
 gi|2459712|gb|AAB71788.1| FlgC [Agrobacterium tumefaciens]
          Length = 139

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 78/136 (57%), Positives = 107/136 (78%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A++ ++ SGL VQS R++I+SENIANAR+TGDTPG+DPYRRKT++F   +    G
Sbjct: 1   MDPLSAASKMSGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDHVSG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   +VKK+GVD+  FV E+DPG+P A+ +G+VK PNVNV++E ADMRE NR Y ANLQ 
Sbjct: 61  VERVKVKKLGVDRGDFVHEYDPGNPAADTNGMVKMPNVNVVIEMADMREANRSYDANLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I+Q+ D++ +T+DLL+
Sbjct: 121 IRQTRDLVASTIDLLK 136


>gi|51598553|ref|YP_072741.1| flagellar basal body rod protein FlgC [Borrelia garinii PBi]
 gi|51573124|gb|AAU07149.1| flagellar basal-body rod protein [Borrelia garinii PBi]
          Length = 152

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP   PYRR+ I F   +        
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGGPYRRQRIIFAPRVSNPYWKGP 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                       GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  D
Sbjct: 62  FIPNYLDNGIGQGVRVVNIEKDKSPLKLKYDPTHPDSISFGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   +  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVVNSSKSMFRSALAILQ 151


>gi|16760051|ref|NP_455668.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764531|ref|NP_460146.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142178|ref|NP_805520.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56413838|ref|YP_150913.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179692|ref|YP_216109.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161614602|ref|YP_001588567.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553037|ref|ZP_02346787.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167994039|ref|ZP_02575131.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234101|ref|ZP_02659159.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168237257|ref|ZP_02662315.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244774|ref|ZP_02669706.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264032|ref|ZP_02686005.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467127|ref|ZP_02700969.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168822618|ref|ZP_02834618.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194446237|ref|YP_002040429.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194448226|ref|YP_002045174.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194469652|ref|ZP_03075636.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194737972|ref|YP_002114174.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197250491|ref|YP_002146868.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264065|ref|ZP_03164139.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197362761|ref|YP_002142398.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198244048|ref|YP_002215962.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200389763|ref|ZP_03216374.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204930701|ref|ZP_03221574.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205353087|ref|YP_002226888.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857317|ref|YP_002243968.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213161846|ref|ZP_03347556.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213419883|ref|ZP_03352949.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
 gi|213424678|ref|ZP_03357443.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582035|ref|ZP_03363861.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213615928|ref|ZP_03371754.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648924|ref|ZP_03378977.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865507|ref|ZP_03387626.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224584321|ref|YP_002638119.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911005|ref|ZP_04654842.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289828582|ref|ZP_06546407.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|60392283|sp|P0A1I7|FLGC_SALTY RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|60392284|sp|P0A1I8|FLGC_SALTI RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|25298909|pir||AH0639 probable flagellar basal-body rod protein FlgC (proximal rod
           protein) STY1214 [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16419692|gb|AAL20105.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502345|emb|CAD08299.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29137808|gb|AAO69369.1| putative flagellar basal-body rod protein FlgC [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|56128095|gb|AAV77601.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62127325|gb|AAX65028.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161363966|gb|ABX67734.1| hypothetical protein SPAB_02352 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404900|gb|ACF65122.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194406530|gb|ACF66749.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194456016|gb|EDX44855.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194713474|gb|ACF92695.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630453|gb|EDX49079.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197094238|emb|CAR59743.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197214194|gb|ACH51591.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197242320|gb|EDY24940.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289825|gb|EDY29186.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197938564|gb|ACH75897.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199602208|gb|EDZ00754.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204320160|gb|EDZ05364.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205272868|emb|CAR37797.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205322443|gb|EDZ10282.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328049|gb|EDZ14813.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331940|gb|EDZ18704.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336413|gb|EDZ23177.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205341032|gb|EDZ27796.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347372|gb|EDZ34003.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709120|emb|CAR33453.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224468848|gb|ACN46678.1| flagellar basal body rod protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261246386|emb|CBG24195.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992949|gb|ACY87834.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157716|emb|CBW17208.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312912162|dbj|BAJ36136.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320086385|emb|CBY96158.1| Flagellar basal-body rod protein flgC [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321223793|gb|EFX48856.1| Flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616545|gb|EFY13454.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620514|gb|EFY17378.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622508|gb|EFY19353.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629659|gb|EFY26434.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632621|gb|EFY29367.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636884|gb|EFY33587.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641578|gb|EFY38216.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644068|gb|EFY40614.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322653957|gb|EFY50280.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658489|gb|EFY54751.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663347|gb|EFY59549.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670081|gb|EFY66221.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674855|gb|EFY70946.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676675|gb|EFY72742.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682597|gb|EFY78616.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686650|gb|EFY82629.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322714162|gb|EFZ05733.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129445|gb|ADX16875.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195764|gb|EFZ80940.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198344|gb|EFZ83448.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203172|gb|EFZ88202.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209175|gb|EFZ94112.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209679|gb|EFZ94608.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217865|gb|EGA02580.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222153|gb|EGA06537.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224925|gb|EGA09183.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229667|gb|EGA13790.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232892|gb|EGA16988.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240627|gb|EGA24669.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242941|gb|EGA26962.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250258|gb|EGA34147.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252633|gb|EGA36471.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258839|gb|EGA42492.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261028|gb|EGA44621.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266937|gb|EGA50422.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269978|gb|EGA53427.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326623710|gb|EGE30055.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326628167|gb|EGE34510.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332988066|gb|AEF07049.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 134

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S LA QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALAAQSKRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVDAAPGQATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVASVIESQAPEKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANIEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|110632658|ref|YP_672866.1| flagellar basal body rod protein FlgC [Mesorhizobium sp. BNC1]
 gi|110283642|gb|ABG61701.1| flagellar basal-body rod protein FlgC [Chelativorans sp. BNC1]
          Length = 139

 Score =  187 bits (475), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 72/136 (52%), Positives = 93/136 (68%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HG 57
           MD L  +  IA SGLA QS RM+++SEN+ANA++T + PG DPYRRKTISF   +   +G
Sbjct: 1   MDPLSTAVKIAGSGLAAQSERMRVVSENLANAQSTSEVPGGDPYRRKTISFAAELGRGNG 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V  I  D + F  E+ PGH  A+  G VK PNVN+LVE ADMRE NR Y ANLQ 
Sbjct: 61  GAMVEVSAIARDPAEFPVEYMPGHEAADEFGYVKMPNVNMLVEMADMREANRGYEANLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ+ ++++ T+DLLR
Sbjct: 121 VKQARELISMTIDLLR 136


>gi|227820856|ref|YP_002824826.1| flagellar basal body rod protein FlgC [Sinorhizobium fredii NGR234]
 gi|227339855|gb|ACP24073.1| flagellar basal-body rod protein FlgC [Sinorhizobium fredii NGR234]
          Length = 139

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 78/136 (57%), Positives = 102/136 (75%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L ++  ++ SGL  +S R++I+SENIANAR+TGD PG+DPYRRKTISF   +  + G
Sbjct: 1   MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDVPGADPYRRKTISFAAEVDRASG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V+++G D S F  EFDPG+P A+  G+VK PNVNVL+E ADMRE NR Y ANLQT
Sbjct: 61  ASLVEVQRLGTDDSDFSIEFDPGNPAADEKGMVKMPNVNVLIEMADMREANRAYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQS D+++ T+DLLR
Sbjct: 121 VKQSRDLISQTIDLLR 136


>gi|254246963|ref|ZP_04940284.1| Flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           PC184]
 gi|124871739|gb|EAY63455.1| Flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           PC184]
          Length = 141

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +    P   PY+ K + F         
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADS-ATGPDGKPYKAKQVVFATDPLGGAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y
Sbjct: 60  TASGQGVGGVRVTKVMDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKTLMLKTLTIG 140


>gi|148270547|ref|YP_001245007.1| flagellar basal-body rod protein FlgC [Thermotoga petrophila RKU-1]
 gi|170289253|ref|YP_001739491.1| flagellar basal-body rod protein FlgC [Thermotoga sp. RQ2]
 gi|147736091|gb|ABQ47431.1| flagellar basal-body rod protein FlgC [Thermotoga petrophila RKU-1]
 gi|170176756|gb|ACB09808.1| flagellar basal-body rod protein FlgC [Thermotoga sp. RQ2]
          Length = 140

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 8/136 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
               +I+ +G++ Q  R++I+S NIANA TT  T   +PYRRK   F E +         
Sbjct: 5   FEIMNISATGMSAQRLRVEIVSTNIANAETTR-TETGEPYRRKVPVFAEYLRRTPNGKIE 63

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           S GV+V KI  D S F   +DP HP A+ +G V+ PNVN++ E  D+    R Y AN+  
Sbjct: 64  SAGVKVVKIEEDPSPFRLVYDPAHPDADENGYVRMPNVNIVREMVDLINAQRAYDANVAA 123

Query: 118 IKQSHDMMTTTLDLLR 133
              +  M+ + L + R
Sbjct: 124 FNVTKAMVNSALQIGR 139


>gi|116327145|ref|YP_796865.1| flagellar basal body rod protein FlgC [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116332198|ref|YP_801916.1| flagellar basal body rod protein FlgC [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116119889|gb|ABJ77932.1| Endoflagellar proximal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116125887|gb|ABJ77158.1| Endoflagellar proximal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 153

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 52/150 (34%), Positives = 72/150 (48%), Gaps = 20/150 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
           L +S +I+ +GL+ Q  RM +IS NIAN+ TT +T G  P+RR  +              
Sbjct: 3   LFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTRWRSP 62

Query: 51  ---FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
              F        GV+V KI  D +     +DP HP A       G V+ PNVN++ E  D
Sbjct: 63  VYPFGVAPGEGKGVKVMKIEKDMTPLRLVYDPTHPDAIQIGPKKGYVEMPNVNIVTEMTD 122

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN+Q I  S  M    L++ R
Sbjct: 123 MISASRSYEANVQMINGSKAMFNKALEIGR 152


>gi|254502506|ref|ZP_05114657.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
 gi|222438577|gb|EEE45256.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
          Length = 136

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 62/136 (45%), Positives = 84/136 (61%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L+ S  I+ SGL  Q+ RM++I+ENIANA +T  TP  +PYRRK  +F+       G
Sbjct: 1   MD-LMKSLFISASGLKAQNGRMRVIAENIANANSTARTPDEEPYRRKIPTFQSEFDKQLG 59

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V + +I  D+S F     PGHP A+ +G V  PNV+ LVE+ADMRE  R Y ANL  
Sbjct: 60  ADKVELGRIVEDKSAFKSTHMPGHPAADENGYVLQPNVSTLVESADMREAQRSYEANLNV 119

Query: 118 IKQSHDMMTTTLDLLR 133
           I+ +  M+  T+D+LR
Sbjct: 120 IETTRKMLQRTIDILR 135


>gi|318605240|emb|CBY26738.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 134

 Score =  186 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           L+    IA S L+ QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALSAQSQRLNVSASNMANADSV-TGPDGQPYRAKQVVFQVAAQPGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV +I  D +     F PG+P+ANA G V+ PNV+V  E  +    +R Y AN++ +  
Sbjct: 62  VRVAQIIDDPAPDRLVFQPGNPLANAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMLKTLTLGQ 134


>gi|170682563|ref|YP_001744106.1| flagellar basal body rod protein FlgC [Escherichia coli SMS-3-5]
 gi|170520281|gb|ACB18459.1| flagellar basal-body rod protein FlgC [Escherichia coli SMS-3-5]
          Length = 134

 Score =  186 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSQRLNVAASNLANADSL-TGPDGQPYRAKQVVFQVNAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|238919257|ref|YP_002932772.1| flagellar basal-body rod protein FlgC, [Edwardsiella ictaluri
           93-146]
 gi|238868826|gb|ACR68537.1| flagellar basal-body rod protein FlgC, putative [Edwardsiella
           ictaluri 93-146]
          Length = 134

 Score =  186 bits (473), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L++   I+ S L  QS RM + + N+ANA +    P   PY  K + F+         GG
Sbjct: 3   LLSIFDISGSALTAQSERMNVAASNMANADSV-TGPDGQPYHAKQVVFQVNPAAGEEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV +I  D +     + PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VRVSQIVEDPAPERLVYQPGNPLADAKGYVRMPNVDVVSEMVNSIAASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMMKTLTLGQ 134


>gi|85058009|ref|YP_453711.1| flagellar basal body rod protein FlgC [Sodalis glossinidius str.
           'morsitans']
 gi|84778529|dbj|BAE73306.1| flagellar basal-body rod protein FlgC [Sodalis glossinidius str.
           'morsitans']
          Length = 134

 Score =  186 bits (473), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L +   I+ S L  QS R+ + + N+ANA +    P  +PYR K + F+    +    GG
Sbjct: 3   LFSIFDISGSALMAQSQRLNVSASNMANADSV-TGPDGEPYRAKQVVFQLDAALGQPVGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D + +   +DPGHP+AN  G ++ PNVN + E  +    +R Y AN++ I  
Sbjct: 62  VRVSQVVEDPAPWRLVYDPGHPLANDRGYIRMPNVNRVAEMVNTLSASRSYQANVEVINS 121

Query: 121 SHDMMTTTLDLLR 133
           +  MM  TL + +
Sbjct: 122 ARSMMMKTLAMGQ 134


>gi|319898635|ref|YP_004158728.1| flagellar basal-body rod protein flgC [Bartonella clarridgeiae 73]
 gi|319402599|emb|CBI76144.1| Flagellar basal-body rod protein flgC [Bartonella clarridgeiae 73]
          Length = 138

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/135 (50%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---S 58
           D LIA+  IA +GL+ QS R++II+EN+ANA +TG + G+ PY+RKT+SFE  ++    +
Sbjct: 3   DRLIAAEQIATTGLSAQSTRLRIIAENLANANSTGKSAGARPYQRKTVSFEATLNPYIDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV VK+I  D++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVKRISTDKAPFIMRYEPGHLAADSNGYVKYPNVNSIIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ D+++ T+DLL+
Sbjct: 123 RQARDLVSQTIDLLK 137


>gi|238764390|ref|ZP_04625340.1| Flagellar basal-body rod protein flgC [Yersinia kristensenii ATCC
           33638]
 gi|238697416|gb|EEP90183.1| Flagellar basal-body rod protein flgC [Yersinia kristensenii ATCC
           33638]
          Length = 134

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           L+    IA S L+ QS RM + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALSAQSQRMNVSASNMANADSV-TGPDGQPYRAKQVVFQVAAQPGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +     F PG+P+A+A G V+ PNV++  E  +    +R Y AN++ +  
Sbjct: 62  VRVAQVIDDPAPDRLVFQPGNPLADAKGYVRMPNVDITGEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMLKTLTLGQ 134


>gi|238788313|ref|ZP_04632107.1| Flagellar basal-body rod protein flgC [Yersinia frederiksenii ATCC
           33641]
 gi|238723559|gb|EEQ15205.1| Flagellar basal-body rod protein flgC [Yersinia frederiksenii ATCC
           33641]
          Length = 134

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           L+    IA S L+ QS RM + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALSAQSQRMNVSASNMANADSV-TGPDGQPYRAKQVVFQVAAQPGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ +  
Sbjct: 62  VRVAQVVDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMLKTLTLGQ 134


>gi|295096227|emb|CBK85317.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 134

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSKRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVDAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+ASG VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVADVVESQAPDKLVYEPGNPLADASGYVKMPNVDVVGEMVNSMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|117923583|ref|YP_864200.1| flagellar basal-body rod protein FlgC [Magnetococcus sp. MC-1]
 gi|117607339|gb|ABK42794.1| flagellar basal-body rod protein FlgC [Magnetococcus sp. MC-1]
          Length = 141

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 12/143 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           MD+L  S  +  SGLA Q  RM IISEN+ANA+TT  TP   PY+R+   F         
Sbjct: 1   MDFL-TSFKVTASGLAAQRLRMNIISENVANAQTTR-TPEGGPYKRRDPVFMSRPFQDYL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
             E   G+ GV V ++ VD      ++DP HP ANA G V  PN++V+ E  +M   +R 
Sbjct: 59  TREESAGATGVAVDRVNVDHRPPRLQYDPNHPDANADGYVAMPNIDVMTEMVNMMSASRS 118

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y AN+  +  S  M    L++ R
Sbjct: 119 YEANVSVLNASKQMALKALEIGR 141


>gi|322421737|ref|YP_004200960.1| flagellar basal-body rod protein FlgC [Geobacter sp. M18]
 gi|320128124|gb|ADW15684.1| flagellar basal-body rod protein FlgC [Geobacter sp. M18]
          Length = 145

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 76/147 (51%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           MD+   S  I+ S LA +  RM +IS N+AN  +T    G  PYRRK   F         
Sbjct: 1   MDF-FTSMDISASALAAERTRMNLISSNLANVNSTRTAEGG-PYRRKDAVFTATPVTEGK 58

Query: 56  ---------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                    + +  V+V +I  DQ     +++PGHP A+A+G V YPN+NV+ E ADM  
Sbjct: 59  SFGAALSRANEARSVQVTQINEDQRPPRLQYEPGHPDADANGYVAYPNINVVEEMADMIT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+   + +  M   TLDLLR
Sbjct: 119 ASRSYEANITATQAAKSMALKTLDLLR 145


>gi|90418393|ref|ZP_01226305.1| flagellar basal-body rod protein flgC [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90338065|gb|EAS51716.1| flagellar basal-body rod protein flgC [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 138

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 76/135 (56%), Positives = 97/135 (71%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
           D L++S  IA SGL  QS RM+I+SENIANA+TTG TPGSDPY+RK +SF+  +    G 
Sbjct: 3   DPLLSSLKIAASGLQAQSTRMRIVSENIANAQTTGTTPGSDPYQRKMVSFQSELDRVSGA 62

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V V K+G D + F+ E DPG+P ANA G VK PNV +LVE ADMRE NR Y AN+Q +
Sbjct: 63  QMVSVDKVGRDDTPFILESDPGNPAANADGYVKMPNVRMLVEMADMREANRSYEANIQVV 122

Query: 119 KQSHDMMTTTLDLLR 133
           KQ+ +++  T+DLLR
Sbjct: 123 KQAREIINMTIDLLR 137


>gi|225849147|ref|YP_002729311.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225643183|gb|ACN98233.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 137

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           +     ++ SG+  +  R+ + + N+AN  +T       PYRRK   FE V+        
Sbjct: 2   IFKGLEVSVSGMQAERVRIDLSASNLANVNSTR-AEDGQPYRRKVPVFEAVLDSQSKNTP 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              VRVK+I  D S F  +FDP +P A+ +G V+ PNV+ + E  DM    R Y ANL  
Sbjct: 61  IYKVRVKEIQTDPSPFKLKFDPNNPDADQNGYVRLPNVDPIREMVDMMSAMRSYEANLTA 120

Query: 118 IKQSHDMMTTTLDLLR 133
                DM+  +L+++R
Sbjct: 121 FNTHKDMILKSLEIIR 136


>gi|146311244|ref|YP_001176318.1| flagellar basal body rod protein FlgC [Enterobacter sp. 638]
 gi|145318120|gb|ABP60267.1| flagellar basal-body rod protein FlgC [Enterobacter sp. 638]
          Length = 134

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSQRLNVAASNMANADSV-TGPDGQPYRAKQVVFQVDAAPGGATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     F+PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVSSVVESQAPDKLVFEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|319405399|emb|CBI79018.1| Flagellar basal-body rod protein flgC [Bartonella sp. AR 15-3]
          Length = 138

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/135 (48%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---S 58
           D LIA+  IA +GL+ QS R+++I+EN+AN  +TG + G+ PY+RKT+SFE +++    +
Sbjct: 3   DLLIAAEQIATTGLSAQSTRLRVIAENLANVNSTGKSAGARPYQRKTVSFEAILNPYLDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV V +I  D++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVTRISTDKAPFIMRYEPGHLAADSNGYVKYPNVNSIIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ D+++ T+DLL+
Sbjct: 123 RQARDLVSQTIDLLK 137


>gi|217976223|ref|YP_002360370.1| flagellar basal body rod protein FlgC [Methylocella silvestris BL2]
 gi|217501599|gb|ACK49008.1| flagellar basal-body rod protein FlgC [Methylocella silvestris BL2]
          Length = 140

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 75/136 (55%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS  +A SGL  QSAR++I+SEN+ANA++TG TPG+DPY RKTI+F   +  + G
Sbjct: 2   IDPLEASLRVAGSGLEAQSARLRIVSENLANAQSTGSTPGADPYARKTITFASELDRASG 61

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   RVK IG D++ F  E DPG+P A++ G VK PNVNV++E ADMRE NR Y ANLQ 
Sbjct: 62  VDLVRVKGIGADKAPFRVEQDPGNPAADSKGFVKLPNVNVIMEMADMREANRSYEANLQI 121

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ+ ++ + T+DLLR
Sbjct: 122 VKQTRELSSMTVDLLR 137


>gi|239817167|ref|YP_002946077.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
 gi|239803744|gb|ACS20811.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
          Length = 138

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 4/132 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGGV 61
           +    +A S +A QS RM + + N+ANA +    P   PYR K + FE         GGV
Sbjct: 8   MNIFSVAGSAMAAQSQRMNVTASNLANAESVAG-PDGKPYRAKQVVFEVDASGQQDIGGV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V  +  D S     FDP +P A+A G V  PNVNV+ E  +M   +R Y AN++ +  +
Sbjct: 67  KVAGVIEDPSPLKMVFDPKNPHADAKGYVAMPNVNVVEEMTNMISASRSYQANVEVLNTA 126

Query: 122 HDMMTTTLDLLR 133
             +M  TL + +
Sbjct: 127 KTLMVKTLSIGQ 138


>gi|307945654|ref|ZP_07660990.1| flagellar basal-body rod protein FlgC [Roseibium sp. TrichSKD4]
 gi|307771527|gb|EFO30752.1| flagellar basal-body rod protein FlgC [Roseibium sp. TrichSKD4]
          Length = 136

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/136 (47%), Positives = 85/136 (62%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           MD LI S  +A SGL  Q+ RM++I+ENIANA +T  TP  +PYRR+  +F+        
Sbjct: 1   MD-LIKSLFVAASGLKAQNGRMRVIAENIANANSTAKTPDGEPYRRRVPTFQSHFSKELN 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V + K+  D+S F E + PGHP AN  G V  PNVN L+ETADMRE  R Y ANL  
Sbjct: 60  AEVVELGKVAEDKSAFKERYQPGHPAANEQGYVLEPNVNTLIETADMREAQRSYEANLNV 119

Query: 118 IKQSHDMMTTTLDLLR 133
           I+ S  M+  T+D+L+
Sbjct: 120 IQSSRRMLQRTIDILK 135


>gi|188997545|ref|YP_001931796.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932612|gb|ACD67242.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 136

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L     I+ SG+  +  R+ + + N+AN  +T  T    PYRRK   FE V+        
Sbjct: 2   LFKGLEISVSGMQAERVRIDLAASNLANVNSTH-TENGQPYRRKVPVFEAVLDAQSQIPV 60

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRVK I  D S F  +FDP +P A   G V+ PNV+ + E  DM    R Y ANL   
Sbjct: 61  YKVRVKDIQEDPSPFKLKFDPNNPDAGPDGYVRLPNVDPIREMVDMMTAMRTYEANLTAF 120

Query: 119 KQSHDMMTTTLDLLR 133
               DM+  +L+++R
Sbjct: 121 NTHKDMLIKSLEIIR 135


>gi|15964413|ref|NP_384766.1| flagellar basal body rod protein FlgC [Sinorhizobium meliloti 1021]
 gi|307311555|ref|ZP_07591196.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti
           BL225C]
 gi|307318910|ref|ZP_07598341.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti AK83]
 gi|17380478|sp|Q52944|FLGC_RHIME RecName: Full=Flagellar basal-body rod protein flgC
 gi|15073590|emb|CAC45232.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
 gi|306895324|gb|EFN26079.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti AK83]
 gi|306899572|gb|EFN30201.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti
           BL225C]
          Length = 139

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/136 (56%), Positives = 102/136 (75%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L ++  ++ SGL  +S R++I+SENIANAR+TGD PG+DP+RRKTISF   +  + G
Sbjct: 1   MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V+++G D S F  EFDPG+P A+  G+VK PNVN+L+E ADMRE NR Y ANLQT
Sbjct: 61  ASLVEVERLGTDDSDFNIEFDPGNPAADEKGMVKLPNVNILIEMADMREANRAYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQS D+++ T+DLLR
Sbjct: 121 IKQSRDLISQTIDLLR 136


>gi|217059|dbj|BAA02862.1| FlgC [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|581758|emb|CAA36310.1| unnamed protein product [Salmonella enterica subsp. enterica
           serovar Typhimurium]
          Length = 134

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S LA QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALAAQSKRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVDAAPGQATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVASVIESQAPEKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRTYQANIEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|150019082|ref|YP_001311336.1| flagellar basal body rod protein FlgC [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905547|gb|ABR36380.1| flagellar basal-body rod protein FlgC [Clostridium beijerinckii
           NCIMB 8052]
          Length = 135

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 3/132 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
             S  I+ +GL+ +  RM  I+ N+ANA TT    G  PY RK   F+E +  +    GV
Sbjct: 4   FTSMQISATGLSAERLRMDTITSNMANASTTRSANGKGPYVRKVAVFQEALDANKDMAGV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +  KI  D S   + +DP HP A+++G V  PNVNVL E ADM    R Y AN+ T    
Sbjct: 64  KAVKIENDPSPLRKVYDPTHPDADSNGYVTMPNVNVLNEMADMMVATRSYEANVDTFNAL 123

Query: 122 HDMMTTTLDLLR 133
             M +  L++ +
Sbjct: 124 KSMFSKALEIGK 135


>gi|237731005|ref|ZP_04561486.1| flagellar basal body rod protein FlgC [Citrobacter sp. 30_2]
 gi|226906544|gb|EEH92462.1| flagellar basal body rod protein FlgC [Citrobacter sp. 30_2]
          Length = 134

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSKRLNVAASNMANADSVSG-PDGQPYRAKQVVFQVDAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVADVIESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              +M  TL L +
Sbjct: 122 VKSLMLKTLTLGQ 134


>gi|320173527|gb|EFW48723.1| Flagellar basal-body rod protein FlgC [Shigella dysenteriae CDC
           74-1112]
          Length = 134

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  Q  R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQFQRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVNAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|107023955|ref|YP_622282.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia AU
           1054]
 gi|116691042|ref|YP_836665.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
           HI2424]
 gi|170734376|ref|YP_001766323.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
 gi|206558966|ref|YP_002229726.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
           J2315]
 gi|105894144|gb|ABF77309.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia AU
           1054]
 gi|116649131|gb|ABK09772.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           HI2424]
 gi|169817618|gb|ACA92201.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
 gi|198035003|emb|CAR50875.1| flagellar basal-body rod protein FlgC (putative proximal rod
           protein) [Burkholderia cenocepacia J2315]
          Length = 141

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +    P   PY+ K + F         
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADS-ATGPDGKPYKAKQVVFATDPMGGAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y
Sbjct: 60  TASGQGVGGVRVTKVMDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKTLMLKTLTIG 140


>gi|319409189|emb|CBI82833.1| Flagellar basal-body rod protein flgC [Bartonella schoenbuchensis
           R1]
          Length = 137

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/135 (51%), Positives = 102/135 (75%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---S 58
           D LIA+  +A +GL+ QS R++II+EN+ANA +TG +PG+ PYRRKT+SFE  ++    +
Sbjct: 3   DRLIAAEQVATTGLSAQSMRLRIIAENLANANSTGKSPGASPYRRKTVSFEAALNPHSDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV+V +IG D++ F+  ++PGH  A+++G VKYPNVN +VE ADMRE NR Y ANLQ +
Sbjct: 63  QGVQVTRIGNDKAPFIMRYEPGHLAADSNGYVKYPNVNSIVEMADMREANRSYEANLQVV 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q  D+++ T+DLL+
Sbjct: 123 RQVRDLVSQTIDLLK 137


>gi|156934442|ref|YP_001438358.1| flagellar basal body rod protein FlgC [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532696|gb|ABU77522.1| hypothetical protein ESA_02273 [Cronobacter sakazakii ATCC BAA-894]
          Length = 134

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S +  QS RM + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSAMTAQSKRMNVAASNLANADS-ATGPDGQPYRAKQVVFQVDAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVTDVVESQAPDKLVYEPGNPLADAKGYVRMPNVDVVGEMVNSMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|52080221|ref|YP_079012.1| flagellar basal body rod protein FlgC [Bacillus licheniformis ATCC
           14580]
 gi|52785598|ref|YP_091427.1| flagellar basal body rod protein FlgC [Bacillus licheniformis ATCC
           14580]
 gi|319646000|ref|ZP_08000230.1| flagellar basal-body rod protein [Bacillus sp. BT1B_CT2]
 gi|52003432|gb|AAU23374.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
           14580]
 gi|52348100|gb|AAU40734.1| FlgC [Bacillus licheniformis ATCC 14580]
 gi|317391750|gb|EFV72547.1| flagellar basal-body rod protein [Bacillus sp. BT1B_CT2]
          Length = 150

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 18/147 (12%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTIS-------FEEV 54
             S +I+ S L  Q  RM  +S N+AN  TT          PYRRK +S       F  V
Sbjct: 4   FNSINISASALTAQRVRMDTVSSNLANMDTTRAKLVDGQWQPYRRKLVSTAPKGESFSSV 63

Query: 55  MHGSG--------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           +  S         GV+V KI  D++ F   +DP HP AN  G V+ PNV+ L E  D+  
Sbjct: 64  LQSSMNASARVGEGVKVTKISEDKTPFKLVYDPTHPDANEDGYVQMPNVDPLKEMVDLMS 123

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + R Y AN+  +  +  M+   L++ +
Sbjct: 124 STRSYEANVTAMNATKGMLMKALEIGK 150


>gi|311280019|ref|YP_003942250.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae SCF1]
 gi|308749214|gb|ADO48966.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae SCF1]
          Length = 134

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L++   +A S L  QS R+ + + N+ANA +    P   PYR K + F+    +   +GG
Sbjct: 3   LLSIFDVAGSALTAQSKRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVDAPIGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     F PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVANVVESQAPDKLVFQPGNPLADAKGYVRMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|283833632|ref|ZP_06353373.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
 gi|291071315|gb|EFE09424.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
          Length = 134

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSKRLNVAASNMANADSV-TGPDGQPYRAKQVVFQVDAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVADVIESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              +M  TL L +
Sbjct: 122 VKSLMLKTLTLGQ 134


>gi|253573516|ref|ZP_04850859.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847044|gb|EES75049.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 149

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 51/147 (34%), Positives = 71/147 (48%), Gaps = 17/147 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTIS-------FEE 53
           +  S  I++S L  Q  RM +IS NIANA TT          PYRRKT+        F+ 
Sbjct: 3   ISDSFGISSSALTAQRLRMDVISSNIANAETTRAKIVDGKAVPYRRKTVVMAPKEMDFDS 62

Query: 54  VMHG-------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            ++        S GV++ KI  D S     ++P HP A++ G V  PNV++L E  DM  
Sbjct: 63  ALNSVMGKEVSSQGVKITKIQEDPSPLKPVYNPTHPDADSEGYVYMPNVDILKEMVDMIS 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  +  S  M T  L + +
Sbjct: 123 ATRSYEANVTALNASKAMFTKALQIGK 149


>gi|193069522|ref|ZP_03050476.1| flagellar basal-body rod protein FlgC [Escherichia coli E110019]
 gi|192957270|gb|EDV87719.1| flagellar basal-body rod protein FlgC [Escherichia coli E110019]
          Length = 134

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ +   N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSQRLNVAVSNLANADSV-TGPDGQPYRAKQVVFQVNAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|115353120|ref|YP_774959.1| flagellar basal body rod protein FlgC [Burkholderia ambifaria AMMD]
 gi|170703094|ref|ZP_02893914.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           IOP40-10]
 gi|171321836|ref|ZP_02910737.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
 gi|172061974|ref|YP_001809626.1| flagellar basal body rod protein FlgC [Burkholderia ambifaria
           MC40-6]
 gi|115283108|gb|ABI88625.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria AMMD]
 gi|170131991|gb|EDT00499.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           IOP40-10]
 gi|171092874|gb|EDT38126.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
 gi|171994491|gb|ACB65410.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MC40-6]
          Length = 141

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +    P   PY+ K + F         
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADS-ATGPDGKPYKAKQVVFATDPMGGAR 59

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                G GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y
Sbjct: 60  TASGQGVGGVRVTKVMDDPSPMKSTYDPANPSADANGYVQMPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKTLMLKTLTIG 140


>gi|158320510|ref|YP_001513017.1| flagellar basal-body rod protein FlgC [Alkaliphilus oremlandii
           OhILAs]
 gi|158140709|gb|ABW19021.1| flagellar basal-body rod protein FlgC [Alkaliphilus oremlandii
           OhILAs]
          Length = 147

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +  S +I+ SGL  +  RM I ++NIANA TT  + G  PYRR+ + F+     +     
Sbjct: 3   IFNSLNISASGLTAERLRMDIATKNIANANTTRTSNG-TPYRRQVVVFKTKDAPTPFSEH 61

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV V  I  D + +   ++PGHP A+ +G VK PNV+++ E A+M   
Sbjct: 62  LKRSGGSPSKMNGVEVSSIQNDTAPYKSVYEPGHPDADENGYVKMPNVDIMTEMANMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN+  +  +  M   TL++ +
Sbjct: 122 SRAYEANITAMNGTKSMFLKTLEIGK 147


>gi|323165582|gb|EFZ51369.1| flagellar basal-body rod protein FlgC [Shigella sonnei 53G]
          Length = 134

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSQRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVNAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNM 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|254519424|ref|ZP_05131480.1| flagellar basal-body rod protein FlgC [Clostridium sp. 7_2_43FAA]
 gi|226913173|gb|EEH98374.1| flagellar basal-body rod protein FlgC [Clostridium sp. 7_2_43FAA]
          Length = 134

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---G 60
           +  +  I+ SGL+ +  RM  I+ NI NA TT       PY RK   F+E +  +    G
Sbjct: 3   IFNTMRISASGLSAERLRMDTITSNITNATTTRG-EDGKPYVRKIAVFQENLDKANKLNG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+  +I  D+S     +DP HP AN  G V  PNVN+L E AD+   +R Y AN+ T+  
Sbjct: 62  VKAVEIVEDESPLKSVYDPTHPDANEDGYVTMPNVNLLNEMADIIAASRAYEANVDTLNA 121

Query: 121 SHDMMTTTLDLLR 133
           S  M T +L+L R
Sbjct: 122 SKSMFTKSLELGR 134


>gi|260597443|ref|YP_003210014.1| flagellar basal body rod protein FlgC [Cronobacter turicensis
           z3032]
 gi|260216620|emb|CBA29913.1| Flagellar basal-body rod protein flgC [Cronobacter turicensis
           z3032]
          Length = 134

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S +  QS RM + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSAMTAQSKRMNVAASNLANADS-ATGPDGQPYRAKQVIFQVDAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVTDVVESQAPDKLVYEPGNPLADAKGYVRMPNVDVVGEMVNSMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMLKTLTLGQ 134


>gi|121533765|ref|ZP_01665592.1| flagellar basal-body rod protein FlgC [Thermosinus carboxydivorans
           Nor1]
 gi|121307756|gb|EAX48671.1| flagellar basal-body rod protein FlgC [Thermosinus carboxydivorans
           Nor1]
          Length = 143

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 72/142 (50%), Gaps = 13/142 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L  +   A SG+  +  RM +IS NIANA TT  TP   PYRR+ + F+     +     
Sbjct: 3   LFTAIDAAASGMTAERLRMDVISNNIANANTTR-TPEGGPYRRQMVIFQPRAGQNSFADL 61

Query: 60  --------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GVRV  I  D++ F + FDP HP ANA+G V  PNVN++ E  DM    R Y
Sbjct: 62  LSGKVENVGVRVVGIVKDEAPFRQVFDPNHPDANAAGYVAMPNVNIIAEMVDMMTAARAY 121

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I  +  M    L++ R
Sbjct: 122 EANVTAINAAKSMALKALEIGR 143


>gi|170768138|ref|ZP_02902591.1| flagellar basal-body rod protein FlgC [Escherichia albertii
           TW07627]
 gi|170122904|gb|EDS91835.1| flagellar basal-body rod protein FlgC [Escherichia albertii
           TW07627]
          Length = 134

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSQRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVNAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVADVIESQAPDKWVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM   L L +
Sbjct: 122 VKSMMLKNLTLGQ 134


>gi|152980444|ref|YP_001353109.1| FlgC flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
 gi|151280521|gb|ABR88931.1| FlgC flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
          Length = 135

 Score =  184 bits (468), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 5/134 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    +++ S ++ QS R+ ++S NIANA +T  +     YR K + F+      G    
Sbjct: 3   LFNIFNVSGSAMSAQSQRLNVVSSNIANAEST-TSADGKTYRAKQVEFQAQQMKGGATST 61

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D S     FDP HP A+ +G V  PNVNV+ E  +M   +R Y  N++T+ 
Sbjct: 62  GVRVNRVVEDTSPLKMVFDPKHPNADETGHVAMPNVNVVEEMVNMISASRSYQTNVETMN 121

Query: 120 QSHDMMTTTLDLLR 133
            +  M+  TL L +
Sbjct: 122 TAKTMLLKTLTLGQ 135


>gi|167465320|ref|ZP_02330409.1| flagellar basal body rod protein FlgC [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 149

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTIS--------FE 52
           L     I++S L  Q  RM +IS NIANA +T          PY+RK +         F 
Sbjct: 3   LTNGFDISSSALTAQRLRMDVISSNIANADSTRGKFVDGKWVPYQRKMVVVEPKNQTNFA 62

Query: 53  EVMHGS------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           + +  +       GVRV  I  DQ+ F   ++P HP ++A G V  PNV++  E  DM  
Sbjct: 63  QNLQNAMKNGTGQGVRVSNIVGDQTPFKRVYNPVHPDSDADGYVYMPNVDIQKEMVDMIS 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  +  +  M+T  L++ R
Sbjct: 123 ATRSYEANVTALNATKGMITKALEIGR 149


>gi|118589983|ref|ZP_01547387.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
 gi|118437480|gb|EAV44117.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
          Length = 138

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 70/136 (51%), Positives = 95/136 (69%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L A+  I+ +GL  QS R++++SEN+ANAR+TG+  G DPYRRKTI+FE        +
Sbjct: 3   DPLSATLQISGAGLRAQSERLRVVSENLANARSTGEAAGDDPYRRKTITFESEFSRAVQA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V VK IG D++ F  E+DPGHP A+ +G VK PNVN L+E ADMRETNR Y ANL+ +
Sbjct: 63  NLVSVKGIGEDKAEFAVEYDPGHPAADENGYVKMPNVNTLLELADMRETNRSYEANLKVM 122

Query: 119 KQSHDMMTTTLDLLRD 134
            Q+ +M+   +DLLR+
Sbjct: 123 TQAREMVMRNIDLLRN 138


>gi|297538894|ref|YP_003674663.1| flagellar basal-body rod protein FlgC [Methylotenera sp. 301]
 gi|297258241|gb|ADI30086.1| flagellar basal-body rod protein FlgC [Methylotenera sp. 301]
          Length = 135

 Score =  183 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L    +I+ S ++ Q+ R+  ++ N+ANA +   +    PY+ K + F     GS    G
Sbjct: 3   LFNVFNISGSAMSAQAQRLNTVASNLANADS-ATSANGTPYKAKQVVFSATPTGSPDASG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V K+  D S     +DP HP+AN  G V  PNVNV  E  +M   +R Y  N++T+  
Sbjct: 62  VKVLKVIEDNSPAKVVYDPKHPLANDKGYVTMPNVNVTEEMVNMISASRAYQNNVETMNA 121

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TL + +
Sbjct: 122 AKTMLLKTLTIGQ 134


>gi|197120201|ref|YP_002140628.1| flagellar basal body rod protein FlgC [Geobacter bemidjiensis Bem]
 gi|197089561|gb|ACH40832.1| flagellar basal body rod protein FlgC [Geobacter bemidjiensis Bem]
          Length = 145

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 73/147 (49%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           MD+   S  I+ + LA +  RM +IS N+AN  +T    G  PYRRK   F       G 
Sbjct: 1   MDF-FTSMDISATALAAERTRMNLISSNLANVNSTRTAEGG-PYRRKDAVFTATPLKEGA 58

Query: 60  -------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                         V+V +I  D      +++PGHP A+ +G V YPN+NV+ E ADM  
Sbjct: 59  SFGAALSQATSARSVQVTQIKEDPRPPRLQYEPGHPDADPNGYVAYPNINVVEEMADMIT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+   + S  M   TL+L+R
Sbjct: 119 ASRSYEANITATQASKSMALKTLELMR 145


>gi|39995516|ref|NP_951467.1| flagellar basal-body rod protein FlgC [Geobacter sulfurreducens
           PCA]
 gi|39982279|gb|AAR33740.1| flagellar basal-body rod protein FlgC [Geobacter sulfurreducens
           PCA]
 gi|298504516|gb|ADI83239.1| flagellar basal body rod protein FlgC [Geobacter sulfurreducens
           KN400]
          Length = 146

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 16/146 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           MD+  ++  +++S L+ +  RM +IS N+ANA +T    G  PY+RK   F     G G 
Sbjct: 1   MDF-FSAMQVSSSALSAERTRMNLISANLANANSTRTAEGG-PYKRKDAVFAATQVGEGF 58

Query: 60  -------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV+V  I  D +    ++DP HP A+A G V  PNVNV+ E ADM  
Sbjct: 59  RSALDRMRKNAPQGVQVTGIVEDPNPPRLQYDPSHPDADAKGYVALPNVNVVEEMADMIA 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLL 132
             R Y AN+  ++ + +M   TL++ 
Sbjct: 119 ATRAYEANVTAMQAAKNMALKTLEIG 144


>gi|149182501|ref|ZP_01860974.1| flagellar basal-body rod protein C [Bacillus sp. SG-1]
 gi|148849761|gb|EDL63938.1| flagellar basal-body rod protein C [Bacillus sp. SG-1]
          Length = 153

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 21/151 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG--- 57
           +  S + + S L+ Q  RM +IS N+ANA TT          PYRRK++ F+        
Sbjct: 3   IFHSMNTSASALSAQRLRMDVISSNMANADTTRGKLVDGEWQPYRRKSVVFQPNGGQFSS 62

Query: 58  --------------SGGVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                           GV+V +I  D+ + F   +DP HP AN  G V+ PNV+ L E  
Sbjct: 63  FLNKAMNTKDSGSLGNGVKVSEIKEDEETPFNLVYDPEHPDANQDGYVQMPNVDPLREMI 122

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+    R Y AN+     +  MM  +L++ +
Sbjct: 123 DLISATRSYEANVTVFNANKSMMMKSLEIGK 153


>gi|288958048|ref|YP_003448389.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288910356|dbj|BAI71845.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 136

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 65/136 (47%), Positives = 86/136 (63%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  S  ++ SG+  Q  R+++ISEN+ANA TT +TPG  PYRRKT+ F+  +  +  
Sbjct: 1   MD-LYKSMAVSASGMKAQGTRLKVISENLANASTTAETPGDLPYRRKTVVFKNELDRAMD 59

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   RV K+ VD+S F   +DP HP A+A G V  PNVN +VE  DMRE  R Y ANL  
Sbjct: 60  VDKVRVAKVDVDKSDFQRRYDPSHPSADADGYVLMPNVNSVVEAMDMREAQRSYEANLSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           I  +  M+T T+D+LR
Sbjct: 120 IDTARQMLTRTIDILR 135


>gi|71906389|ref|YP_283976.1| flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB]
 gi|71846010|gb|AAZ45506.1| Flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB]
          Length = 137

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L     +++S +  QS R+   + N+ANA +        PYR K + FE    G+ G   
Sbjct: 3   LFNVFQVSSSAMTAQSMRLNTTASNLANADSVISA-DGKPYRAKQVVFEATPMGNAGDSS 61

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRV++I  D S     +DP +P A+  G V +PNVNV+ E  +M   +R Y  N++ +
Sbjct: 62  KGVRVRQIVEDASPPRLVYDPKNPAADEKGYVAFPNVNVVEEMTNMISASRSYQTNVEVM 121

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+  TL + +
Sbjct: 122 NTAKTMLLRTLSIGQ 136


>gi|187918167|ref|YP_001883730.1| flagellar basal body rod protein FlgC [Borrelia hermsii DAH]
 gi|119861015|gb|AAX16810.1| flagellar basal-body rod protein FlgC [Borrelia hermsii DAH]
          Length = 152

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 21/151 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           L +S + A++GL  Q  R+ +I+ NIAN  TT  + G   YRR+ + F            
Sbjct: 3   LFSSINTASTGLTAQRLRLDVIANNIANVETTRTSEGGS-YRRQRVIFAPRVVSPYWKGP 61

Query: 54  -----VMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANA----SGIVKYPNVNVLVETAD 103
                + +G G GVRV  I  D+S    ++DP HP A       G V++PNVN + E  D
Sbjct: 62  FVPDDLDNGVGQGVRVASIEKDKSPLKLKYDPTHPDAIRSGELKGYVEFPNVNAVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           M   +R Y AN   I  S  M  + L +L++
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALSILQN 152


>gi|260466621|ref|ZP_05812809.1| flagellar basal-body rod protein FlgC [Mesorhizobium opportunistum
           WSM2075]
 gi|259029627|gb|EEW30915.1| flagellar basal-body rod protein FlgC [Mesorhizobium opportunistum
           WSM2075]
          Length = 138

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 73/137 (53%), Positives = 95/137 (69%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  +A SGL  QS R++++SEN+ANA++TG TPGSDPYRRKTISF   +  + G
Sbjct: 1   MDALTAALKVAASGLGAQSERLRVVSENLANAQSTGTTPGSDPYRRKTISFVSELDRASG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V  I  D S F  EF PG+  A+  G VK PNVNVL+E ADM E NR Y ANLQ 
Sbjct: 61  SSTVEVNSIDRDPSDFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEANRSYEANLQV 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           +KQ+ D+++ T+DL+R+
Sbjct: 121 VKQARDLISMTIDLMRN 137


>gi|182418356|ref|ZP_02949651.1| flagellar basal-body rod protein FlgC [Clostridium butyricum 5521]
 gi|237666561|ref|ZP_04526546.1| flagellar basal-body rod protein FlgC [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182377738|gb|EDT75282.1| flagellar basal-body rod protein FlgC [Clostridium butyricum 5521]
 gi|237657760|gb|EEP55315.1| flagellar basal-body rod protein FlgC [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 135

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 3/132 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
             S  I+ +GL+ +  RM  I+ N++NARTT    GS PY R+   F+E +  +    GV
Sbjct: 4   FKSMQISATGLSAERLRMDTITSNMSNARTTRSADGSGPYVRRIAVFQEALDANKEMAGV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +  KI  D S   +E++P HP A+ +G V  PNVNVL E ADM    R Y AN+ T    
Sbjct: 64  KAVKIEKDNSPLRKEYNPNHPDADENGYVTMPNVNVLNEMADMMVATRSYEANVDTFNAL 123

Query: 122 HDMMTTTLDLLR 133
             M +  L++ +
Sbjct: 124 KSMFSKALEIGK 135


>gi|294827625|ref|NP_710527.2| flagellar basal body rod protein FlgC [Leptospira interrogans
           serovar Lai str. 56601]
 gi|293385469|gb|AAN47545.2| flagellar basal body rod protein FlgC [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 153

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 20/150 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
           L +S +I+ +GL+ Q  RM +IS NIAN+ TT +T G  P+RR  +              
Sbjct: 3   LFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTKWRSP 62

Query: 51  ---FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
              F        GV+V K+  D +     +DP HP +       G V+ PNVN++ E  D
Sbjct: 63  VYPFGVSPGEGKGVKVMKVEKDMTPLRLVYDPTHPDSIQIGPKKGYVEMPNVNIVTEMTD 122

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN+Q I  S  M    L++ R
Sbjct: 123 MISASRSYEANVQMINGSKAMFNKALEIGR 152


>gi|203284214|ref|YP_002221954.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
 gi|203287753|ref|YP_002222768.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
 gi|201083657|gb|ACH93248.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
 gi|201084973|gb|ACH94547.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
          Length = 154

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 53/151 (35%), Positives = 74/151 (49%), Gaps = 21/151 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           L +S + A++GL  Q  R+ +I+ NIAN  TT    G   YRR+ I F            
Sbjct: 5   LFSSINTASTGLTAQRLRLDVIANNIANVETTRTADGG-AYRRERIIFAPRVVSPYWKGP 63

Query: 54  -----VMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANA----SGIVKYPNVNVLVETAD 103
                + +G G GVRV  I  D+S    ++DP HP A       G V++PNVNV+ E  D
Sbjct: 64  FVPDYLDNGVGQGVRVSGIEKDKSPLKLQYDPTHPDAIKSGELKGYVEFPNVNVVEEMVD 123

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           M   +R Y AN   I  S  M  + L +L++
Sbjct: 124 MISASRAYEANSSVINSSKSMFRSALSILQN 154


>gi|317492430|ref|ZP_07950859.1| flagellar basal-body rod protein FlgC [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919769|gb|EFV41099.1| flagellar basal-body rod protein FlgC [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 134

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           ++    I+ S LA QS RM + + N+ANA +    P  +PYR K + FE        +GG
Sbjct: 3   MLNIFDISGSALAAQSQRMNVAASNMANADSV-TGPDGEPYRAKQVVFEVQAAPGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++  D S     + PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVSQLVDDPSPERLVYQPGNPLADAKGYVRMPNVDVVGEMVNSIAASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMMKTLTLGQ 134


>gi|328543166|ref|YP_004303275.1| flagellar basal-body rod protein C [polymorphum gilvum SL003B-26A1]
 gi|326412912|gb|ADZ69975.1| Flagellar basal-body rod protein C [Polymorphum gilvum SL003B-26A1]
          Length = 136

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           MD L+ S  I+ SGL  Q+ R+++I+EN+ANA +TG TP  DPYRRK  +F+        
Sbjct: 1   MD-LVKSLFISASGLKAQNGRIRVIAENLANADSTGRTPDEDPYRRKIPTFKNRFDRDLQ 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V + K+  D+S F   ++PGHP A+A+G V+ PNVN LVET DMRE  R Y ANL  
Sbjct: 60  AELVELGKLAEDRSEFPTRYEPGHPAADANGNVRVPNVNSLVETVDMREAQRSYEANLNV 119

Query: 118 IKQSHDMMTTTLDLLR 133
           I+ +  M+  T+D+LR
Sbjct: 120 IESTRRMLQRTIDILR 135


>gi|304397202|ref|ZP_07379081.1| flagellar basal-body rod protein FlgC [Pantoea sp. aB]
 gi|304355351|gb|EFM19719.1| flagellar basal-body rod protein FlgC [Pantoea sp. aB]
          Length = 134

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           L+    IA S +  QS R+ + + N+ANA +    P   PY  K + F+        +GG
Sbjct: 3   LLNIFDIAGSAMTAQSQRLNVSASNLANADSV-TGPDGKPYVAKQVVFQTDAAPGSATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V KI  D +     +DPG+P+A+A G VK PNV+V+ E+ +    +R Y AN++ +  
Sbjct: 62  VKVAKIVDDPTPAKLVYDPGNPMADAKGYVKMPNVDVVSESVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL L +
Sbjct: 122 VKSMMMKTLTLGQ 134


>gi|209964219|ref|YP_002297134.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
 gi|209957685|gb|ACI98321.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
          Length = 136

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 67/136 (49%), Positives = 91/136 (66%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L+ +  ++ +GL VQ  R+++I+EN+ANA +T  TPG  PYRRK + F+ V++   G
Sbjct: 1   MD-LMNTLSLSAAGLKVQGTRLRVIAENLANANSTAPTPGDLPYRRKVVLFQNVLNRELG 59

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+VKKI VD+S F   +DPGHP A+A G V  PNVN LVE+ DMRE  R Y ANL  
Sbjct: 60  MPTVKVKKIDVDRSDFQRRYDPGHPSADAEGYVLTPNVNSLVESMDMREAQRSYEANLNV 119

Query: 118 IKQSHDMMTTTLDLLR 133
           I  +  M+T T++LLR
Sbjct: 120 IDTTRQMLTRTIELLR 135


>gi|327399355|ref|YP_004340224.1| flagellar basal-body rod protein FlgC [Hippea maritima DSM 10411]
 gi|327181984|gb|AEA34165.1| flagellar basal-body rod protein FlgC [Hippea maritima DSM 10411]
          Length = 137

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 6/135 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +  S +IA+SG++ Q  RM IIS NIANA T   TP   PY+R+ + FE + +       
Sbjct: 3   IFDSMNIASSGMSAQRLRMNIISSNIANADTVR-TPEGGPYKRRDVVFEAIGYSKFSDVL 61

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+V  I  D +     +DP +P+AN  G V YPN+N ++E  ++ +  R Y AN   I
Sbjct: 62  KKVQVADIIRDDTPPKLVYDPSNPLANKDGYVAYPNINPVIEMTNLIDAMRTYQANASVI 121

Query: 119 KQSHDMMTTTLDLLR 133
             +   +   L +LR
Sbjct: 122 DSAKQTIQAALGILR 136


>gi|253702510|ref|YP_003023699.1| flagellar basal-body rod protein FlgC [Geobacter sp. M21]
 gi|251777360|gb|ACT19941.1| flagellar basal-body rod protein FlgC [Geobacter sp. M21]
          Length = 145

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           MD+   S  I+ + LA +  RM +IS N+AN  +T    G  PYRRK   F         
Sbjct: 1   MDF-FTSMDISATALAAERTRMNLISSNLANVNSTRTAEGG-PYRRKDAVFTATPLKEGA 58

Query: 56  ---------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                     G+  V+V +I  DQ     +++P HP A+ +G V YPN+NV+ E ADM  
Sbjct: 59  SFGAALSKAAGARSVQVTQINEDQRPPRLQYEPSHPDADPNGYVAYPNINVVEEMADMIT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+   + S  M   TL+L+R
Sbjct: 119 ASRSYEANITATQASKSMALKTLELMR 145


>gi|218133658|ref|ZP_03462462.1| hypothetical protein BACPEC_01527 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991033|gb|EEC57039.1| hypothetical protein BACPEC_01527 [Bacteroides pectinophilus ATCC
           43243]
          Length = 149

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 51/147 (34%), Positives = 73/147 (49%), Gaps = 18/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-------------- 49
           L +  +IA+SG+  Q  R  +ISENIAN  TT  +    PY RK +              
Sbjct: 3   LFSQFNIASSGMTAQRLRTDVISENIANVNTTRTS-DGTPYVRKEVYFTEKGKSVQSFEH 61

Query: 50  SFEEVMHG--SGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            FE   +G    GV+V  I  D  +  V+++DP HP A+ +G V YPNVNV+ E  D+ +
Sbjct: 62  VFEAARNGIAGNGVKVTSILEDNTTDMVKKYDPSHPDADENGYVTYPNVNVVQEMTDLID 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+        M T  L++ +
Sbjct: 122 ATRSYEANVTAFNAGKSMATKGLEIGK 148


>gi|119953092|ref|YP_945301.1| flagellar basal body rod protein FlgC [Borrelia turicatae 91E135]
 gi|119861863|gb|AAX17631.1| flagellar basal-body rod protein FlgC [Borrelia turicatae 91E135]
          Length = 152

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           L +S + A +GL  Q  R+ +I+ NIAN  TT  + G   YRR+ I F            
Sbjct: 3   LFSSINTAATGLTAQRLRLDVIANNIANVETTRTSEGGS-YRRQRIVFSPRVVSPYWKGP 61

Query: 54  -----VMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANA----SGIVKYPNVNVLVETAD 103
                + +G G GVRV  I  D+S    ++DP HP A       G V++PNVN + E  D
Sbjct: 62  FVPDYLDNGIGQGVRVAGIERDKSPLKLKYDPTHPDAIKSGERKGYVEFPNVNAVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           M   +R Y AN   I  S  +  + L +L++
Sbjct: 122 MISASRAYEANSTVINSSKAIFRSALSILQN 152


>gi|134095099|ref|YP_001100174.1| basal-body rod protein [Herminiimonas arsenicoxydans]
 gi|133739002|emb|CAL62050.1| Flagellar basal-body rod protein FlgC (Putative proximal rod
           protein) [Herminiimonas arsenicoxydans]
          Length = 134

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---G 60
           L    ++A S ++ QS R+ ++S NIANA +T  +     YR K + F+ V        G
Sbjct: 3   LFNIFNVAGSAMSAQSQRLNVVSSNIANAEST-TSADGKTYRAKQVEFQSVPMAGATSTG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V+++  D S     FDP HP A+ +G V  PNVNV+ E  +M   +R Y  N++T+  
Sbjct: 62  VKVRQVVEDASPLKMVFDPKHPNADETGHVAMPNVNVVEEMVNMISASRSYQTNVETMNA 121

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TL L +
Sbjct: 122 AKTMLLKTLTLGQ 134


>gi|163794133|ref|ZP_02188106.1| flagellar basal body rod protein [alpha proteobacterium BAL199]
 gi|159180747|gb|EDP65266.1| flagellar basal body rod protein [alpha proteobacterium BAL199]
          Length = 136

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/136 (44%), Positives = 86/136 (63%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           MD L  +  I+ SG+  Q  R+++++EN+ANA + G+T   DPYRRKTI+FE  +     
Sbjct: 1   MD-LTNAIKISASGMRAQGTRLRVVAENVANAESLGNTAADDPYRRKTITFENELDRKIN 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  VR+ KIG DQ  F   ++P HP+A+  G +K PNVN L+E  DMRE  R Y AN+  
Sbjct: 60  ADMVRISKIGRDQGDFNIVYEPHHPLADDKGYIKMPNVNTLIEMTDMREAERSYEANVSV 119

Query: 118 IKQSHDMMTTTLDLLR 133
           I+ S  ++  TL+LLR
Sbjct: 120 IESSKSLIERTLELLR 135


>gi|45656202|ref|YP_000288.1| flagellar basal body rod protein FlgC [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45599436|gb|AAS68925.1| flagellar basal-body rod protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 155

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 20/150 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
           L +S +I+ +GL+ Q  RM +IS NIAN+ TT +T G  P+RR  +              
Sbjct: 5   LFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTKWRSP 64

Query: 51  ---FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
              F        GV+V K+  D +     +DP HP +       G V+ PNVN++ E  D
Sbjct: 65  VYPFGVSPGEGKGVKVMKVEKDMTPLRLVYDPTHPDSIQIGPKKGYVEMPNVNIVTEMTD 124

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN+Q I  S  M    L++ R
Sbjct: 125 MISASRSYEANVQMINGSKAMFNKALEIGR 154


>gi|2916794|emb|CAA11960.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
          Length = 139

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  +  ++ SGL  +S R++I+SENIANAR+TGD PG+DP+RRKTISF   +  + G
Sbjct: 1   MDPLTLALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V+++G D S F  EFDPG+P A+  G+VK PN+N+L+E ADMRE NR Y ANLQT
Sbjct: 61  ASLVEVERLGTDDSEFNIEFDPGNPAADEKGMVKLPNLNILIEMADMREANRAYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQS D+++ T+DLLR
Sbjct: 121 IKQSRDLISQTIDLLR 136


>gi|295111496|emb|CBL28246.1| flagellar basal-body rod protein FlgC [Synergistetes bacterium
           SGP1]
          Length = 139

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 8/136 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------ 58
             S  +A S L      M  IS N+AN  TT    G  PY+R+   F E++  +      
Sbjct: 4   FDSMEVAGSALTAHRLWMDTISSNLANINTTRTLSGG-PYKRRVPVFAEMLDRTIGGYRD 62

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            GGVRV  I  D++     + P HP A+  G V YPNVN++ E  DM   +R Y ANL  
Sbjct: 63  IGGVRVTAITEDRTAPRMTYQPDHPDADKDGYVAYPNVNLVREMTDMLVASRAYEANLSV 122

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + +M    L+++R
Sbjct: 123 VTTAREMWNGALEVMR 138


>gi|311030132|ref|ZP_07708222.1| flagellar basal body rod protein FlgC [Bacillus sp. m3-13]
          Length = 150

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 18/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTG---DTPGSDPYRRKTI-------SFEE 53
           +  S +I++S L  Q  RM +IS N+AN  +T         +PYRRK +       SF+ 
Sbjct: 3   MFKSMNISSSALTAQRLRMDVISSNMANVDSTRGEYRNGQWEPYRRKLVETAPKENSFQS 62

Query: 54  VMHGSGG--------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +  + G        V+V +I  D + F   FDP HP AN  G V+ PNV+ L E  D+ 
Sbjct: 63  YLQKASGNGSGFGSGVKVTRIKEDDAPFRVMFDPEHPDANEDGYVELPNVDPLKEMVDLM 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +R Y AN+     S  +M  TL+L +
Sbjct: 123 SASRSYEANVTVFNASKGIMMKTLELGK 150


>gi|322832562|ref|YP_004212589.1| flagellar basal-body rod protein FlgC [Rahnella sp. Y9602]
 gi|321167763|gb|ADW73462.1| flagellar basal-body rod protein FlgC [Rahnella sp. Y9602]
          Length = 134

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           ++    IA S LA QS R+ + + N+ANA +    P   PY+ K + F+        +GG
Sbjct: 3   MLGIFDIAGSALAAQSQRLNVSASNMANADSV-TGPDGKPYKAKQVVFQVDAAPGQETGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++  D +     ++PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVAQVVDDPAPMRMVYEPGNPMADAKGYVQMPNVDVVSEMVNTISASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 TKSLMMKTLTLGQ 134


>gi|254504860|ref|ZP_05117011.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
 gi|222440931|gb|EEE47610.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
          Length = 138

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 74/136 (54%), Positives = 95/136 (69%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
           D L A+  IA SGL  QS RM+I+SEN+ANAR+TG+  G DPYRRKTI+FE   +    +
Sbjct: 3   DPLSATLQIAASGLKAQSDRMRIVSENLANARSTGEASGDDPYRRKTITFESEFNRVTQA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V VK IG D++ F  E+DPGHP A+  G VK PNVN L+E ADMRETNR Y ANL+ +
Sbjct: 63  NLVAVKGIGTDKAPFTVEYDPGHPAADVDGYVKMPNVNTLMELADMRETNRTYEANLKVM 122

Query: 119 KQSHDMMTTTLDLLRD 134
            Q+ +M+   +DLLR+
Sbjct: 123 TQAREMVMRHIDLLRN 138


>gi|118444436|ref|YP_877973.1| flagellar basal body rod protein FlgC [Clostridium novyi NT]
 gi|118134892|gb|ABK61936.1| flagellar basal-body rod protein FlgC [Clostridium novyi NT]
          Length = 145

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 51/142 (35%), Positives = 68/142 (47%), Gaps = 13/142 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVMHGS----- 58
            +S  I+ SGLA +  RM  IS NI N +TT    G   PY RK   F+E +        
Sbjct: 4   FSSMRISASGLAAERLRMDTISSNITNFKTTRGKDGQRQPYIRKIAVFKENLKKELNKSG 63

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV+   I  D+S     ++P HP A+ +G V  PNVN+L E ADM    R Y
Sbjct: 64  KGYESRLNGVKAVGIVEDKSPLRRVYNPNHPDADENGYVLMPNVNILNEMADMIAATRAY 123

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I  S +M    L++ R
Sbjct: 124 EANVTAINSSKNMFMKALEIGR 145


>gi|261407986|ref|YP_003244227.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. Y412MC10]
 gi|329929277|ref|ZP_08283030.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. HGF5]
 gi|261284449|gb|ACX66420.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. Y412MC10]
 gi|328936646|gb|EGG33089.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. HGF5]
          Length = 149

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 70/147 (47%), Gaps = 17/147 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVM----- 55
           +  S  I  S L  Q  RM +IS NIANA TT        + PYRRKT+ F+        
Sbjct: 3   ISNSFGINASALTAQRLRMDVISSNIANAETTRARIENGQAVPYRRKTVVFQPQQESFEG 62

Query: 56  ---------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                    +   GV+V ++  DQS   + ++P HP ANA G V  PNV++  E  DM  
Sbjct: 63  LLRAQMNGQNAGQGVKVAQVREDQSPLKQVYNPTHPDANAEGYVFMPNVDITKEMVDMLA 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  I  S  M+   L++ R
Sbjct: 123 ATRSYEANVTAINASKAMIMKALEIGR 149


>gi|325295411|ref|YP_004281925.1| flagellar basal-body rod protein FlgC [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065859|gb|ADY73866.1| flagellar basal-body rod protein FlgC [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 135

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 7/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           +     ++ +G+ VQ  R+ I S N+ANA +       +PYRRK   FE V+  +     
Sbjct: 2   IFKGLEVSLTGMEVQRVRIDIHSSNLANANSV--DENGNPYRRKIPIFESVLEKTAKGEI 59

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+VKKI  D S +  ++DP +P+A+ +G VK PNV+ + E  DM    R Y ANL   
Sbjct: 60  YRVKVKKIVEDPSPYKLKYDPSNPLADKNGYVKLPNVDPIREMVDMISAMRTYEANLTAF 119

Query: 119 KQSHDMMTTTLDLLR 133
                M+   +D+L+
Sbjct: 120 NTHKGMLLNAIDILK 134


>gi|260893877|ref|YP_003239974.1| flagellar basal-body rod protein FlgC [Ammonifex degensii KC4]
 gi|260866018|gb|ACX53124.1| flagellar basal-body rod protein FlgC [Ammonifex degensii KC4]
          Length = 137

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 8/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
            I    I+ SGL  +  R+ +++ N+AN  TT  TP   PYRR+   F +V+        
Sbjct: 3   FIDPFRISGSGLTAERLRLDLVANNLANIDTTR-TPAGGPYRRRVPVFAQVLEARKEGMV 61

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GVRV  I  DQS F   +DP HP A  +G V+YPNVNV  E  D+    R Y AN   
Sbjct: 62  GMGVRVVAIVEDQSPFKVVYDPNHPDA-QNGYVRYPNVNVADEVVDLIGAARAYEANATV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ + +M    +++ R
Sbjct: 121 LETAKEMARQAIEIGR 136


>gi|319790422|ref|YP_004152055.1| flagellar basal-body rod protein FlgC [Thermovibrio ammonificans
           HB-1]
 gi|317114924|gb|ADU97414.1| flagellar basal-body rod protein FlgC [Thermovibrio ammonificans
           HB-1]
          Length = 135

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 7/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR- 62
           +     ++ +G+  Q  RM + + N+ANA +        PYRR+   FE V+    GV+ 
Sbjct: 2   IFKGLEVSVTGMLAQRVRMDVAASNLANANSV--DDNGQPYRRRVPIFEAVLDEVNGVKT 59

Query: 63  ----VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
               VKKI  D S F + +DP +P+A   G V  PNV+ L E  DM    R Y ANL   
Sbjct: 60  YRVKVKKIVEDPSPFRKIYDPSNPLAGPDGYVTLPNVDPLREMVDMISAMRSYEANLTAF 119

Query: 119 KQSHDMMTTTLDLLR 133
               +M+  T+D+L+
Sbjct: 120 NTRKNMIVNTIDILK 134


>gi|147678426|ref|YP_001212641.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
           SI]
 gi|146274523|dbj|BAF60272.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
           SI]
          Length = 147

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 14/144 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTG--DTPGSDPYRRKTISFEEVMH----- 56
           L  S  I+ SGL  +  R+ +IS NIAN  T G  D P    YRR+   F +V+      
Sbjct: 3   LFDSFAISASGLTAERLRLDLISNNIANMNTAGRPDDPAVPAYRRRFPVFAQVLQEVRSA 62

Query: 57  -------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GVRV +I  D S     ++P HP+A+  G V YPN+N++ E  +M    R
Sbjct: 63  GTARPRYKGAGVRVIRIVEDHSPPRLAYEPSHPLADERGYVAYPNINIVNEMINMITATR 122

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +  + D+    +++ R
Sbjct: 123 SYEANVTALNAAKDIALKAIEIGR 146


>gi|89098646|ref|ZP_01171528.1| flagellar basal-body rod protein C [Bacillus sp. NRRL B-14911]
 gi|89086608|gb|EAR65727.1| flagellar basal-body rod protein C [Bacillus sp. NRRL B-14911]
          Length = 149

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEE------- 53
           +  S +  +S L  Q  RM +IS N+AN  +T          PY RK +  +        
Sbjct: 3   MFHSMNTTSSALTAQRLRMDVISSNMANVDSTRGKLVNGEWQPYTRKEVVMQPQEKNFSS 62

Query: 54  -------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GVRV +I  DQ+ F   +DP HP AN +G V+ PNV+ L E  D+  
Sbjct: 63  FLNTAMNAGSAGSGVRVSEIREDQTPFKLVYDPSHPDANEAGYVQMPNVDPLREMVDLIS 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+     S  MM   L++ +
Sbjct: 123 ATRSYEANVTVFNASKSMMMKALEIGK 149


>gi|302392398|ref|YP_003828218.1| flagellar basal-body rod protein FlgC [Acetohalobium arabaticum DSM
           5501]
 gi|302204475|gb|ADL13153.1| flagellar basal-body rod protein FlgC [Acetohalobium arabaticum DSM
           5501]
          Length = 145

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 15/144 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L +  ++++SG+  Q  RM +IS NIAN  TT  T    PY++K+  F+           
Sbjct: 3   LFSGMNVSSSGMTAQRLRMDLISNNIANINTTR-TDDGGPYKKKSPVFKAKNDQGFSLPN 61

Query: 59  ---------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV V  I          ++P HP AN  G V+ PN+++  E  DM   +R
Sbjct: 62  SDAQSNQVGQGVEVSSIKESSKPPKLVYNPQHPDANEEGYVEMPNIDIASEMVDMVSASR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +  S  M  + L + +
Sbjct: 122 AYEANVTALNTSKQMAKSALKIGK 145


>gi|89068702|ref|ZP_01156088.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
 gi|89045665|gb|EAR51727.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
          Length = 136

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/136 (45%), Positives = 85/136 (62%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L +   IA SG+  Q  R++I++EN+ANA + G TPG+DPYRRKT+SFEE++    G
Sbjct: 1   MDPLKSITSIAASGMHAQGQRLRIVAENVANADSRGTTPGADPYRRKTVSFEEMIDRESG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V +IG D + F    DP HP A+ +G VK PNVN ++E  +MRE  R Y AN+  
Sbjct: 61  AALVKVGEIGRDTTDFTLVHDPAHPAADENGFVKVPNVNAIIEMTNMREAARSYEANMNM 120

Query: 118 IKQSHDMMTTTLDLLR 133
            +    M    LDLL+
Sbjct: 121 YEAGRAMRQQILDLLK 136


>gi|42524765|ref|NP_970145.1| flagellar basal-body rod protein [Bdellovibrio bacteriovorus HD100]
 gi|39576975|emb|CAE78204.1| flagellar basal-body rod protein [Bdellovibrio bacteriovorus HD100]
          Length = 147

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 16/148 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M   +    I++SG+A Q  RM  I+ NIAN  TT  TP   PYRRK + FE +      
Sbjct: 1   MADFLTGMRISSSGMAAQRMRMNTIASNIANINTT-QTPEGGPYRRKDVVFEAMPDAKNF 59

Query: 61  ---------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                          V+V  +  D+   + +++P HP ANA G V YPN+N++ E  +M 
Sbjct: 60  GEIISSTDPAGSFQRVQVTDVISDRKAPLLKYEPDHPDANADGYVAYPNINLMEEMTNMI 119

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + +R Y AN+  ++ S DM  + L++ R
Sbjct: 120 QASRSYEANVTAVQASKDMALSALEIGR 147


>gi|255321464|ref|ZP_05362622.1| flagellar basal-body rod protein FlgC [Campylobacter showae RM3277]
 gi|255301320|gb|EET80579.1| flagellar basal-body rod protein FlgC [Campylobacter showae RM3277]
          Length = 165

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 33/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M   ++   I+  GL+ Q  RM +IS NIANA T     G  PYRR+ + F+ V      
Sbjct: 1   MSNYLSDFDISGYGLSAQRFRMNVISSNIANANTVRTAEGG-PYRRREVIFKAVDFDSVL 59

Query: 56  ---------------------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V KI  D   F  ++DP HP A+A G
Sbjct: 60  NDEVAKKHNLLEYENPLDDKFYTKDAKPAIMSVVVDKIVRDDKDFKLKYDPSHPDADARG 119

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N ++E AD+ E  R Y AN+   + +  +  + L+LL+
Sbjct: 120 YVAYPNINPVIEMADLIEATRAYQANVSAFQSAKTIAQSALELLQ 164


>gi|114777413|ref|ZP_01452410.1| Flagellar basal-body rod protein FlgC [Mariprofundus ferrooxydans
           PV-1]
 gi|114552195|gb|EAU54697.1| Flagellar basal-body rod protein FlgC [Mariprofundus ferrooxydans
           PV-1]
          Length = 148

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 57/145 (39%), Positives = 80/145 (55%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
           L++S HI+ SG++ Q  RM I++ENIANA +T  + G  PYRR+ + F+ V         
Sbjct: 5   LLSSMHISASGMSAQRTRMDIVAENIANAGSTRTSEGG-PYRRRQVIFQAVSPAQPFSQV 63

Query: 56  -------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                   G   V+   I  D+  F E +DP HP A+A GIVK PNVN + E  DM    
Sbjct: 64  FNSSFQSEGQKSVKAAYIAQDKKPFREVYDPSHPDADARGIVKMPNVNPVEEMVDMNSAA 123

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN+ T++ S  M   +L+LLR
Sbjct: 124 RSFEANVTTMEASKRMFLKSLELLR 148


>gi|170748109|ref|YP_001754369.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654631|gb|ACB23686.1| flagellar basal-body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
          Length = 138

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 73/136 (53%), Positives = 99/136 (72%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS+ IA SG+  QS R+++I+ENIANAR+TG T GSDPY RKTI+F   +  + G
Sbjct: 2   IDPLAASSRIAGSGMEAQSERLRVIAENIANARSTGQTAGSDPYTRKTITFRTALDRASG 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V +++IG D++ F  E+DPG+P A+A G VK PNVN+L+E ADMRE NR Y ANLQ 
Sbjct: 62  TAAVAIRQIGEDKAPFRVEYDPGNPAADADGNVKLPNVNMLIEMADMREANRSYEANLQM 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  M+ + ++LLR
Sbjct: 122 IKQTRAMVASIIELLR 137


>gi|82702451|ref|YP_412017.1| flagellar basal-body rod protein FlgC [Nitrosospira multiformis
           ATCC 25196]
 gi|82410516|gb|ABB74625.1| flagellar basal-body rod protein FlgC [Nitrosospira multiformis
           ATCC 25196]
          Length = 139

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 9/138 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE--------VM 55
           L     +A S +  Q+ R+ +++ N+ANA +   + G  PY+ K + F          + 
Sbjct: 3   LFNIFTVAGSAMTAQNQRLNVVASNLANADSAASSNG-QPYKAKQVVFMSTSPLGDNGIS 61

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +G+ GVRV  +  DQS     ++P HP+AN  G V  PNVNV+ E  DM   +R Y  N+
Sbjct: 62  NGTHGVRVSGVIEDQSPMKMVYEPSHPMANPEGFVTMPNVNVVEEMVDMISASRSYQNNV 121

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  ++  TL + +
Sbjct: 122 DMMNTAKTLLLKTLTIGQ 139


>gi|323705448|ref|ZP_08117023.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535350|gb|EGB25126.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 149

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 18/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            + S  I+ +GL  +  RM +IS+NIAN  TT  + G  PYRRK +  +E+ + S     
Sbjct: 3   FLNSIDISATGLTAERLRMDVISQNIANVDTTRTSNGG-PYRRKLVVLKEIDNQSSFSDM 61

Query: 59  -----------GGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                       GV V  I  D ++ F   +DPG+P A+++G V YPNVN++ E  DM  
Sbjct: 62  LNAAKGSSTVGNGVEVVSIEEDNKTPFNRVYDPGNPDADSTGYVNYPNVNIVSEMVDMIS 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  +  +  M+   L++ +
Sbjct: 122 ATRAYEANVTAVNSTKSMIEKALEIGK 148


>gi|308186391|ref|YP_003930522.1| Flagellar basal-body rod protein flgC [Pantoea vagans C9-1]
 gi|308056901|gb|ADO09073.1| Flagellar basal-body rod protein flgC [Pantoea vagans C9-1]
          Length = 134

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           L+    IA S +  QS R+ + + N+ANA +    P   PY  K + F+        +GG
Sbjct: 3   LLNIFDIAGSAMTAQSQRLNVSASNLANADSV-TGPDGKPYVAKQVVFQTDAAPGSATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++  D +     +DPG+P+A+A G VK PNV+V+ E+ +    +R Y AN++ +  
Sbjct: 62  VKVARVVDDPTPAKLVYDPGNPMADAKGYVKMPNVDVVSESVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL + +
Sbjct: 122 VKSMMMKTLTIGQ 134


>gi|317047689|ref|YP_004115337.1| flagellar basal-body rod protein FlgC [Pantoea sp. At-9b]
 gi|316949306|gb|ADU68781.1| flagellar basal-body rod protein FlgC [Pantoea sp. At-9b]
          Length = 134

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           L+    IA S +  QS R+ + + N+ANA +    P   PY  K + F+        +GG
Sbjct: 3   LLNIFDIAGSAMTAQSQRLNVSASNLANADSV-TGPDGQPYVAKQVVFQTDAAPGMATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +  D S     +DPG+P+A+  G VK PNV+V+ ET +    +R Y AN++ +  
Sbjct: 62  VKVAGVVDDPSPAKLVYDPGNPMADQKGYVKMPNVDVVAETVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL + +
Sbjct: 122 VKSMMMKTLTMGQ 134


>gi|168187558|ref|ZP_02622193.1| flagellar basal-body rod protein FlgC [Clostridium botulinum C str.
           Eklund]
 gi|169294598|gb|EDS76731.1| flagellar basal-body rod protein FlgC [Clostridium botulinum C str.
           Eklund]
          Length = 145

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 50/142 (35%), Positives = 68/142 (47%), Gaps = 13/142 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVMHGS----- 58
            +S  I+ SGL+ +  RM  I  NI N +TT    G   PYRRK   F+E  +       
Sbjct: 4   FSSMRISASGLSAERLRMDTIFSNITNFKTTRGKDGQKQPYRRKIAVFQENFNKELNKSG 63

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV+   I  D+S     ++P HP A+ +G V  PNVN+L E ADM    R Y
Sbjct: 64  NGYESRLNGVKAVGIVEDKSQLRRVYNPNHPDADENGYVLMPNVNILNEMADMIAATRAY 123

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I  S +M    L++ R
Sbjct: 124 EANVTAINSSKNMFMKALEIGR 145


>gi|146307871|ref|YP_001188336.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina ymp]
 gi|145576072|gb|ABP85604.1| flagellar basal-body rod protein FlgC [Pseudomonas mendocina ymp]
          Length = 147

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L +  +IA +G++ QS R+  IS NIANA T   +     YR +   F  V   + G   
Sbjct: 3   LASVFNIAGTGMSAQSTRLNTISSNIANAETVSSSID-QTYRARHPVFATVFQQAQGGDR 61

Query: 61  -------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                        V+V  +  DQS+ +  ++P HP+ANA G V YPNVNV+ E ADM   
Sbjct: 62  GSLFAEQDEAGRGVQVLGVVEDQSSLMPRYEPDHPMANADGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N++ +  +  M+   L L +
Sbjct: 122 SRAFQTNVEMMNTAKQMLQRVLTLGQ 147


>gi|332088752|gb|EGI93864.1| flagellar basal-body rod protein FlgC [Shigella boydii 5216-82]
          Length = 134

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3   LLNIFDIAGSALTAQSQRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVNAAPGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   Q+     ++PG+ +A+A G VK PNV+V+ E  +    +R Y AN++ +  
Sbjct: 62  VKVADVIESQAPDKLVYEPGNQLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM   L L +
Sbjct: 122 VKSMMLKPLTLGQ 134


>gi|308050374|ref|YP_003913940.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
 gi|307632564|gb|ADN76866.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
          Length = 139

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L      A SG++ QS R+   + NIANA +   + G + YR +   FE  +  + G   
Sbjct: 3   LFKIFDTAGSGMSAQSVRLNTTASNIANANSVSSSAG-ETYRARQPIFEAALQQASGYQN 61

Query: 61  ----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I       V +F P HP+A+  G +  PNVNV+ E A+M   +R Y AN+Q
Sbjct: 62  QSVPVQVAGIVESDKPLVRQFSPNHPLADQEGYIYKPNVNVVEEMANMISASRSYQANVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               + DM   TL L +
Sbjct: 122 VASAAKDMAQQTLRLGK 138


>gi|27381986|ref|NP_773515.1| flagellar basal body rod protein FlgC [Bradyrhizobium japonicum
           USDA 110]
 gi|27355156|dbj|BAC52140.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 138

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 74/135 (54%), Positives = 98/135 (72%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L AS  +A+SGL  QS RM+I+SEN+ANA +TG T G+DPY+RKTI+F+  M  + G 
Sbjct: 3   DSLSASLTVASSGLEAQSTRMRIVSENLANATSTGRTAGADPYQRKTITFDAAMDRASGA 62

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              +VK++GVD + +  E+DPGHP A+ SG VK PNVN+++E ADMRE NR Y ANLQ +
Sbjct: 63  QLAKVKEVGVDTTPYRVEYDPGHPAADKSGYVKLPNVNMMIEMADMREVNRSYEANLQVV 122

Query: 119 KQSHDMMTTTLDLLR 133
           KQ   M+  T+DLLR
Sbjct: 123 KQVRSMLGMTIDLLR 137


>gi|23016627|ref|ZP_00056381.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 136

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 60/136 (44%), Positives = 83/136 (61%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  S  IA SG+ VQS R+++ISEN+AN+ +   TP   PYRRK ++F+  +  + G
Sbjct: 1   MDELSKSTTIAISGMKVQSQRLRLISENLANSDSLAQTPEGLPYRRKVMTFKNELDRATG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V K+  D S F   +DP HP A+  G V  PNVN L+E  DMRE  R Y AN+  
Sbjct: 61  TSLVKVDKVRADSSEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREAQRSYEANMNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I  S  +++ T+D+LR
Sbjct: 121 INASRSLLSRTIDMLR 136


>gi|315648139|ref|ZP_07901240.1| flagellar basal-body rod protein FlgC [Paenibacillus vortex V453]
 gi|315276785|gb|EFU40128.1| flagellar basal-body rod protein FlgC [Paenibacillus vortex V453]
          Length = 149

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 66/147 (44%), Gaps = 17/147 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFE-------- 52
           +  S  I  S L  Q  RM +IS NIANA TT        + PYRRKT+ F+        
Sbjct: 3   ISNSFGINASALTAQRLRMDVISSNIANAETTRARIENGQAVPYRRKTVVFQPQQESFEG 62

Query: 53  ------EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV+V  +  DQ+     ++P HP AN  G V  PNV++  E  DM  
Sbjct: 63  LLRAQMSGQDAGQGVKVAAVQEDQAPLKRVYNPTHPDANTEGYVFMPNVDITKEMVDMLA 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  I  S  M+   L++ R
Sbjct: 123 ATRSYEANVTAINASKAMIMKALEIGR 149


>gi|307718596|ref|YP_003874128.1| hypothetical protein STHERM_c09080 [Spirochaeta thermophila DSM
           6192]
 gi|306532321|gb|ADN01855.1| hypothetical protein STHERM_c09080 [Spirochaeta thermophila DSM
           6192]
 gi|315186391|gb|EFU20151.1| flagellar basal-body rod protein FlgC [Spirochaeta thermophila DSM
           6578]
          Length = 152

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 52/151 (34%), Positives = 70/151 (46%), Gaps = 22/151 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L    +IA +GL  Q  RM +IS NIANA TT  T G  P+RR  + F   +        
Sbjct: 3   LFTPINIAATGLTAQRLRMDVISNNIANATTTRTTEGG-PFRRSRVVFRPRVEQPYWRSP 61

Query: 58  ----------SGGVRVKKIGVD-QSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                       GVRV K+  D  +     +DP HP A       G V+YPNVN++ E  
Sbjct: 62  FLPKPLDNGLGKGVRVVKVEKDYDAKTRLVYDPTHPDAIKSGPLKGYVEYPNVNIVNEMV 121

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+ + +R Y ANL  +  S  M    L++ R
Sbjct: 122 DLIDASRAYEANLAVVNGSKTMFLKALEIGR 152


>gi|253996321|ref|YP_003048385.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8]
 gi|253983000|gb|ACT47858.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8]
          Length = 135

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           L    +I+ S ++ Q+ R+  ++ N+ANA +   +    PY+ K + F  +   S    G
Sbjct: 3   LFNVFNISGSAMSAQAQRLNTVASNLANADS-ATSANGTPYKSKQVVFSAMPSKSPDVSG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V K+  D+S     +DP HP+AN  G V  PNVNV  E  +M   +R Y  N++T+  
Sbjct: 62  VKVTKVVEDKSAPRMIYDPKHPLANDKGYVSMPNVNVTEEMVNMISASRAYQNNVETMNA 121

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TL + +
Sbjct: 122 TKTMLMKTLTIGQ 134


>gi|78224306|ref|YP_386053.1| flagellar basal-body rod protein FlgC [Geobacter metallireducens
           GS-15]
 gi|78195561|gb|ABB33328.1| Flagellar basal-body rod protein FlgC [Geobacter metallireducens
           GS-15]
          Length = 147

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 17/147 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           MD+  ++  I++S L+ +  RM +IS NIANA +T    G  PY+RK   F         
Sbjct: 1   MDF-FSAMQISSSALSAERTRMNLISSNIANANSTRTAEGG-PYKRKDAVFAATPAAEKF 58

Query: 58  ------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GV+V ++  DQ+    ++DP HP ANA G V  PNVNV+ E ADM 
Sbjct: 59  QAAMERMRRGTSPAGVQVTQVIEDQNPPRLQYDPTHPDANAQGYVALPNVNVVEEMADMI 118

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLL 132
              R Y AN+  ++ +  M   TL+L 
Sbjct: 119 AATRAYEANVTAVQAAKGMALKTLELG 145


>gi|13472574|ref|NP_104141.1| flagellar basal body rod protein FlgC [Mesorhizobium loti
           MAFF303099]
 gi|14023320|dbj|BAB49927.1| flagellar basal-body rod protein; FlgC [Mesorhizobium loti
           MAFF303099]
          Length = 138

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 72/137 (52%), Positives = 95/137 (69%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  +A SGL  QS R++++SEN+ANA++TG TPG+DPYRRKTISF   +  + G
Sbjct: 1   MDALTAALKVAASGLGAQSERLRVVSENLANAQSTGTTPGADPYRRKTISFVSELDRASG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V  I  D S F  EF PG+  A+  G VK PNVNVL+E ADM E NR Y ANLQ 
Sbjct: 61  ASTVEVNSIDRDPSVFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEANRSYEANLQV 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           +KQ+ D+++ T+DL+R+
Sbjct: 121 VKQARDLISMTIDLMRN 137


>gi|148266225|ref|YP_001232931.1| flagellar basal-body rod protein FlgC [Geobacter uraniireducens
           Rf4]
 gi|146399725|gb|ABQ28358.1| flagellar basal-body rod protein FlgC [Geobacter uraniireducens
           Rf4]
          Length = 146

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 69/148 (46%), Gaps = 17/148 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           MD+   S  I++S L  +  RM +IS N+ANA +T    G  PYRRK   F         
Sbjct: 1   MDF-FTSMDISSSALTAERTRMNLISSNLANANSTRTAEGG-PYRRKDAVFSARPVAESF 58

Query: 60  --------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                          V V +I  DQ+    ++DP HP AN  G V  PNVNV+ E ADM 
Sbjct: 59  SSVFSKTGNRGVPQQVGVVQINEDQNPPRLQYDPTHPDANQQGYVALPNVNVVEEMADMI 118

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+   + +  M   TL+L R
Sbjct: 119 AATRTYEANVTAAQAAKSMAMKTLELGR 146


>gi|255099413|ref|ZP_05328390.1| flagellar basal-body rod protein [Clostridium difficile QCD-63q42]
          Length = 134

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 4/132 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGV 61
            +   I+ SGL  +S +M IIS N+AN   T   P  + YRRK +SFEE      G  GV
Sbjct: 4   FSGMRISASGLTAESLKMDIISSNVANINATRG-PNGEAYRRKVVSFEENYDNKLGMLGV 62

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V  +  D+S   + +DP HP A  +G V+YPNVN+LVE  D+   +R Y +N+ T+   
Sbjct: 63  KVTSVEDDKSPLKKVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQ 122

Query: 122 HDMMTTTLDLLR 133
             M++  L++ +
Sbjct: 123 KSMISKALEIGK 134


>gi|158422260|ref|YP_001523552.1| flagellar basal body rod protein FlgC [Azorhizobium caulinodans ORS
           571]
 gi|158329149|dbj|BAF86634.1| flagellar basal-body rod protein [Azorhizobium caulinodans ORS 571]
          Length = 140

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 76/136 (55%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           +D L  +  IA SGL VQ+ RM+++SEN+AN R+TG TPG+DPY RKTI F+  +    G
Sbjct: 2   IDPLKVAGQIAGSGLQVQAQRMRVVSENLANMRSTGSTPGADPYTRKTIQFQAELDRTLG 61

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V+VK +GVDQ+ F+ E+DPG+P A+ SG+VK PNVN+L E ADMRE NR Y ANLQ 
Sbjct: 62  ASNVKVKSLGVDQAPFLTEYDPGNPAADESGMVKLPNVNMLTEMADMREANRSYEANLQM 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  M+  T+DLLR
Sbjct: 122 IKQTRSMVAMTVDLLR 137


>gi|187478183|ref|YP_786207.1| flagellar basal body rod protein FlgC [Bordetella avium 197N]
 gi|115422769|emb|CAJ49297.1| flagellar basal-body rod protein [Bordetella avium 197N]
          Length = 139

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------EVMH 56
           L++   I+ S LA QS R+ + + N+ANA +    P   PYR + + F+           
Sbjct: 3   LLSIFEISGSALAAQSQRLNVAASNLANADSVAG-PDGQPYRARQVVFQMNPALGQAAGQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GGV+V  +  D S     FDP +P+A+A G V  PNV+ + ET +M   +R Y AN++
Sbjct: 62  EIGGVKVAAVVEDASPLKMVFDPKNPMADAQGYVAMPNVDPVAETVNMIAASRSYQANIE 121

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  +M  TL + +
Sbjct: 122 VLNTAKQLMQRTLTIGQ 138


>gi|296103613|ref|YP_003613759.1| Flagellar basal-body rod protein, FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058072|gb|ADF62810.1| Flagellar basal-body rod protein, FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 134

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHGSGG 60
           L +   I+ S +A QS R+ + + N+ANA +    P   PYR + + F     V    GG
Sbjct: 3   LFSVFDISGSAMAAQSRRLNVSASNMANADSVAG-PDGQPYRARQVVFSVDASVGQEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +    +     ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  
Sbjct: 62  VQVSDVVESSAPDRLVYEPGNPLADEQGYVRMPNVNVMNEMVNTISASRSYQANVEVMNS 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 AKSLMLKTLTLGQ 134


>gi|229544391|ref|ZP_04433449.1| flagellar basal-body rod protein FlgC [Bacillus coagulans 36D1]
 gi|229324876|gb|EEN90553.1| flagellar basal-body rod protein FlgC [Bacillus coagulans 36D1]
          Length = 149

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 74/147 (50%), Gaps = 17/147 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTISFEEV------ 54
           +    +I++  L+ Q  RM +IS NIANA TT DT       PYRRK +           
Sbjct: 3   MFTGMNISSEALSAQRLRMDVISSNIANADTTRDTYVNGKWQPYRRKEVVLAAGGGSFAS 62

Query: 55  -------MHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                  M G+G GV+V  I  D S F +E++P  P A+A+G V  PNV++L E   M  
Sbjct: 63  IFRSKLGMQGAGSGVQVAGIVEDNSDFKKEYNPDDPDADANGYVTKPNVDLLTEMTGMIS 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  +  S  M+  TL+L +
Sbjct: 123 ATRSYEANVTALNASKAMLMKTLELGQ 149


>gi|183220163|ref|YP_001838159.1| flagellar basal body rod protein FlgC [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189910283|ref|YP_001961838.1| flagellar basal body rod protein FlgC [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167774959|gb|ABZ93260.1| Endoflagellar proximal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778585|gb|ABZ96883.1| Flagellar basal-body rod protein FlgC [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 153

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 72/150 (48%), Gaps = 20/150 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
           +  S +I+ +GL+ Q  RM +IS NIAN+ TT +T G  P+RR  +              
Sbjct: 3   MFDSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVILTPINLRTQWKSP 62

Query: 51  ---FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
              F        GV+V KI  D S     +DP HP A       G V+ PN+N++ E  D
Sbjct: 63  VYPFGVAPGEGKGVKVMKIEKDMSPLRLTYDPTHPDAIQTGPKKGYVELPNINIVTEMTD 122

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN+Q I  S  MM   +++ R
Sbjct: 123 MISASRSYEANVQLINGSKAMMNKAMEIGR 152


>gi|150390489|ref|YP_001320538.1| flagellar basal-body rod protein FlgC [Alkaliphilus metalliredigens
           QYMF]
 gi|149950351|gb|ABR48879.1| flagellar basal-body rod protein FlgC [Alkaliphilus metalliredigens
           QYMF]
          Length = 147

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 18/149 (12%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M Y   + + + SGL  +  RM  IS+NIANA TT  TP   PY+R+ + F+        
Sbjct: 1   MSY-FNAINTSASGLTAERFRMDTISKNIANANTTR-TPNGSPYKRQVVLFQSKEDAKGF 58

Query: 58  -------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                         GGV V  +  D S + + +DPGHP AN  G V  PNV+++VE A+M
Sbjct: 59  SSQLERIMNNNEKPGGVEVVGVKNDSSPYRQVYDPGHPDANEEGYVLMPNVDIVVEMANM 118

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN   +  +  M    L++ R
Sbjct: 119 ISATRAYEANTTALNATKSMAMKALEIGR 147


>gi|223040442|ref|ZP_03610716.1| flagellar basal-body rod protein FlgC [Campylobacter rectus RM3267]
 gi|222878292|gb|EEF13399.1| flagellar basal-body rod protein FlgC [Campylobacter rectus RM3267]
          Length = 165

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 33/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M   ++   I+  GL+ Q  RM +IS NIANA T     G  PYRR+ + F+ V      
Sbjct: 1   MSNYLSDFDISGYGLSAQRFRMNVISSNIANANTVRTAEGG-PYRRREVIFKAVDFDSVL 59

Query: 56  ---------------------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V KI  D   F  ++DP HP A+A G
Sbjct: 60  NDEVAKKHNLLEYENPLDDKSYTKDAKPAIMSVVVDKIVRDDKDFKLKYDPSHPDADARG 119

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N ++E AD+ E  R Y AN+   + +  +  + L+LL+
Sbjct: 120 YVAYPNINPVIEMADLIEATRAYQANVSAFQSAKTIAQSALELLQ 164


>gi|300716216|ref|YP_003741019.1| cell-proximal portion of basal-body rod [Erwinia billingiae Eb661]
 gi|299062052|emb|CAX59168.1| Cell-proximal portion of basal-body rod [Erwinia billingiae Eb661]
          Length = 134

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           L+    IA S +  QS R+ + + N+ANA +    P   PY  K + F+        +GG
Sbjct: 3   LLNIFDIAGSAMNAQSQRLNVSASNLANADSV-TGPDGQPYVAKQVVFQTDAVPGSPTGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +     ++PG+P+A+A G VK PNV+V+ ET +    +R Y AN++ +  
Sbjct: 62  VRVAQVVDDPTPAKLVYEPGNPMADAKGYVKMPNVDVVGETVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL + +
Sbjct: 122 VKQMMMKTLTMGQ 134


>gi|302874587|ref|YP_003843220.1| flagellar basal-body rod protein FlgC [Clostridium cellulovorans
           743B]
 gi|307690802|ref|ZP_07633248.1| flagellar basal body rod protein FlgC [Clostridium cellulovorans
           743B]
 gi|302577444|gb|ADL51456.1| flagellar basal-body rod protein FlgC [Clostridium cellulovorans
           743B]
          Length = 143

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 13/141 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------- 56
             S  I++SGL+ +  RM I+S NIAN  TT  T    PY+RK   F+E +         
Sbjct: 4   FDSMRISSSGLSAERLRMDIVSSNIANVNTTR-TEDGGPYKRKIGMFQENVDKYLDSTTG 62

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                S GV+  KI  D+S     +DP HP A+  G V  PN+N+L E AD+  ++R Y 
Sbjct: 63  KYESRSLGVKATKIVEDESALKRSYDPSHPDADEQGYVTMPNINILNEMADLIASSRAYE 122

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN+  I     + T  L++ R
Sbjct: 123 ANVTAITAQKGIFTKALEIGR 143


>gi|330502732|ref|YP_004379601.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
 gi|328917018|gb|AEB57849.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
          Length = 147

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L +  +IA +G++ QS R+  IS NIANA T   +     YR +   F  V   + G   
Sbjct: 3   LASVFNIAGTGMSAQSTRLNTISSNIANAETVSSSLD-QTYRARHPVFATVFQQAQGGDR 61

Query: 61  -------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                        V+V  +  DQS+ +  ++P HP+ANA G V YPNVNV+ E ADM   
Sbjct: 62  GSLFAEQDEAGRGVQVLGVIEDQSSLMPRYEPDHPMANADGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N++ +  +  M+   L L +
Sbjct: 122 SRAFQTNVEMMNTAKQMLQRVLTLGQ 147


>gi|152990371|ref|YP_001356093.1| flagellar basal-body rod protein FlgC [Nitratiruptor sp. SB155-2]
 gi|151422232|dbj|BAF69736.1| flagellar basal-body rod protein FlgC [Nitratiruptor sp. SB155-2]
          Length = 136

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 8/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           +     ++ +GL+ Q  RM I++ N+ANA +        PYRRK   F+E++        
Sbjct: 2   IFKGLEVSQTGLSTQKYRMDIVASNMANANSI--DDNGVPYRRKIPIFQEILDKEQNRIP 59

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V +KK+  D S F  ++DP +P+A+ +G V+ PNV+ L E  DM    R Y ANL  
Sbjct: 60  LSKVAIKKVVEDPSPFKLKYDPNNPLADENGYVQLPNVDPLREMVDMISAMRTYEANLTA 119

Query: 118 IKQSHDMMTTTLDLLR 133
                DM+  T+D+L+
Sbjct: 120 FNTHKDMLLKTIDILK 135


>gi|126697817|ref|YP_001086714.1| flagellar basal-body rod protein [Clostridium difficile 630]
 gi|254973910|ref|ZP_05270382.1| flagellar basal-body rod protein [Clostridium difficile QCD-66c26]
 gi|255091296|ref|ZP_05320774.1| flagellar basal-body rod protein [Clostridium difficile CIP 107932]
 gi|255305270|ref|ZP_05349442.1| flagellar basal-body rod protein [Clostridium difficile ATCC 43255]
 gi|255312954|ref|ZP_05354537.1| flagellar basal-body rod protein [Clostridium difficile QCD-76w55]
 gi|255515713|ref|ZP_05383389.1| flagellar basal-body rod protein [Clostridium difficile QCD-97b34]
 gi|255648807|ref|ZP_05395709.1| flagellar basal-body rod protein [Clostridium difficile QCD-37x79]
 gi|306518922|ref|ZP_07405269.1| flagellar basal body rod protein FlgC [Clostridium difficile
           QCD-32g58]
 gi|115249254|emb|CAJ67067.1| Flagellar basal-body rod protein FlgC [Clostridium difficile]
          Length = 134

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 4/132 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGV 61
            +   I+ SGL  +S +M IIS N+AN   T   P  + YRRK +SFEE      G  GV
Sbjct: 4   FSGMRISASGLTAESLKMDIISSNVANINATRG-PNGEAYRRKVVSFEENYDNKLGMLGV 62

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V  +  D+S   E +DP HP A  +G V+YPNVN+LVE  D+   +R Y +N+ T+   
Sbjct: 63  KVTSVEDDKSPLKEVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQ 122

Query: 122 HDMMTTTLDLLR 133
             M++  L++ +
Sbjct: 123 KSMISKALEIGK 134


>gi|253998490|ref|YP_003050553.1| flagellar basal-body rod protein FlgC [Methylovorus sp. SIP3-4]
 gi|313200565|ref|YP_004039223.1| flagellar basal-body rod protein flgc [Methylovorus sp. MP688]
 gi|253985169|gb|ACT50026.1| flagellar basal-body rod protein FlgC [Methylovorus sp. SIP3-4]
 gi|312439881|gb|ADQ83987.1| flagellar basal-body rod protein FlgC [Methylovorus sp. MP688]
          Length = 134

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---G 60
           L    +++ S ++ QS R+  ++ N+ANA +   +    PY+ K + F      +    G
Sbjct: 3   LFNVFNVSGSAMSAQSQRLNAVASNLANADS-ATSANGQPYKAKQVVFSATPTNNAAVSG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V+++  D S     +DP HP ANA G V  PNVNV  E  +M   +R Y  N++T+  
Sbjct: 62  VKVQQVIEDPSPPKVVYDPKHPAANAQGYVTMPNVNVTEEMVNMISASRAYQNNVETMNA 121

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TL + +
Sbjct: 122 AKTMLLKTLTIGQ 134


>gi|229592132|ref|YP_002874251.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
           SBW25]
 gi|229363998|emb|CAY51548.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens
           SBW25]
          Length = 147

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L +  +IA SG++ Q+ R+  ++ NIANA T   +     YR +   F  +  G      
Sbjct: 3   LSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSID-QTYRARHPVFATMFQGGQSGGS 61

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+V  +  DQS     ++P HP AN  G V YPNVNV+ E ADM   
Sbjct: 62  DSLFQDQGAAGSGVQVLGVVEDQSNLEARYEPNHPAANEKGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N + +  +  MM   L L +
Sbjct: 122 SRSFQTNAEMMNTAKTMMQKVLTLGQ 147


>gi|15615023|ref|NP_243326.1| flagellar basal body rod protein FlgC [Bacillus halodurans C-125]
 gi|10175080|dbj|BAB06179.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
          Length = 152

 Score =  180 bits (457), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 20/150 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTI--------SFE 52
           +    +I+ S L  Q  RM +IS N+ANA TT         +PYRRK I         F 
Sbjct: 3   IFHGMNISGSALTSQRLRMDVISANMANAETTRARQVNGEWEPYRRKMIAVQPNEQTPFS 62

Query: 53  EVMHGS---------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
             +H +          GV+V  I  DQ+ F   + P HP AN  G V+ PNV+ L E  D
Sbjct: 63  AHLHTAMKRSESKIGNGVKVSAIVEDQTPFKLVYQPDHPDANEEGYVEMPNVDPLREMVD 122

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    R Y AN+ T+  S +++   L++ R
Sbjct: 123 LMSATRSYEANVTTLNASKNILMKALEIGR 152


>gi|83309714|ref|YP_419978.1| flagellar basal body rod protein FlgC [Magnetospirillum magneticum
           AMB-1]
 gi|82944555|dbj|BAE49419.1| Flagellar basal body rod protein [Magnetospirillum magneticum
           AMB-1]
          Length = 136

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  S   A SG+ VQS R+++ISEN+ANA +   TP   PYRRK ++F+  +  + G
Sbjct: 1   MDELSKSTQTAISGMKVQSQRLRVISENLANADSLAQTPEGLPYRRKVMTFKNELDRATG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V K+  D + F   +DP HP A+  G V  PNVN L+E  DMRE  R Y AN+  
Sbjct: 61  TNVVKVDKVRADSAEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREAQRSYEANMNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I  S  +++ T+++LR
Sbjct: 121 INASRSLLSRTIEMLR 136


>gi|2275159|gb|AAB81411.1| FlgC [Sinorhizobium meliloti]
          Length = 138

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 75/135 (55%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
           D L  +  ++ SGL  +S R++I+SENIANAR+TGD PG+DP+RRKTISF   +  + G 
Sbjct: 1   DPLTLALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASGA 60

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V V+++G D S F  EFDPG+P A+  G+VK PN+N+L+E ADMRE NR Y ANLQTI
Sbjct: 61  SLVEVERLGTDDSEFNIEFDPGNPAADEKGMVKLPNLNILIEMADMREANRAYEANLQTI 120

Query: 119 KQSHDMMTTTLDLLR 133
           KQS D+++ T+DLLR
Sbjct: 121 KQSRDLISQTIDLLR 135


>gi|168180911|ref|ZP_02615575.1| flagellar basal-body rod protein FlgC [Clostridium botulinum NCTC
           2916]
 gi|182668190|gb|EDT80169.1| flagellar basal-body rod protein FlgC [Clostridium botulinum NCTC
           2916]
          Length = 144

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
             +  I+ SGL+ +  RM  I+ NIANA TT    G  PY+RK   FEE ++        
Sbjct: 5   FDTMRISASGLSAERLRMDTIASNIANATTTRTENGG-PYKRKIAVFEENLNNELNKKNG 63

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+   I  D S   + +DP HP A+  G V  PNVNVL E ADM  + R Y 
Sbjct: 64  ATEKKLYGVKATGIVEDPSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRTYE 123

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN+  +     M    L++ +
Sbjct: 124 ANVTVMNAEKSMFGKALEIGK 144


>gi|172057890|ref|YP_001814350.1| flagellar basal-body rod protein FlgC [Exiguobacterium sibiricum
           255-15]
 gi|171990411|gb|ACB61333.1| flagellar basal-body rod protein FlgC [Exiguobacterium sibiricum
           255-15]
          Length = 132

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 6/133 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHGSGG 60
           + +  H + +GL  Q  R+  +S NIANA+TT          PY RK    +E      G
Sbjct: 3   MFSGFHTSATGLTAQRLRLDTVSANIANAQTTRGELVNGEWQPYARKLAVLKET---GSG 59

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V +I  DQ  F  E++P HP A+  G VK PNV++L E  DM    R Y AN+  +  
Sbjct: 60  VTVSEIRKDQEPFKLEYNPNHPDADELGYVKMPNVDLLKEMVDMMGATRSYEANVTALNA 119

Query: 121 SHDMMTTTLDLLR 133
           +  M+   +++ +
Sbjct: 120 TKAMLVKAMEIGK 132


>gi|167034946|ref|YP_001670177.1| flagellar basal body rod protein FlgC [Pseudomonas putida GB-1]
 gi|166861434|gb|ABY99841.1| flagellar basal-body rod protein FlgC [Pseudomonas putida GB-1]
          Length = 147

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 69/146 (47%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L +  +IA SG++ Q+ R+  ++ NIANA T   +     YR +   F      +     
Sbjct: 3   LSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSID-QTYRARHPVFATTFQNAQAGGS 61

Query: 60  ------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+VK I  DQST    ++P HP AN  G V YPNVNV+ E ADM   
Sbjct: 62  QSLFEDQGEAGQGVQVKGIVEDQSTLEARYEPNHPAANKDGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N + +  +  MM   L L +
Sbjct: 122 SRAFQTNAELMNTAKSMMQKVLTLGQ 147


>gi|319781683|ref|YP_004141159.1| flagellar basal-body rod protein FlgC [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167571|gb|ADV11109.1| flagellar basal-body rod protein FlgC [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 138

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 72/137 (52%), Positives = 94/137 (68%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  +A SGL  QS R++++SEN+ANA++TG  PGSDPYRRKTISF   +  + G
Sbjct: 1   MDALTAALKVAASGLGAQSERLRVVSENLANAQSTGTAPGSDPYRRKTISFVSELDRASG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V  I  D S F  EF PG+  A+  G VK PNVNVL+E ADM E NR Y ANLQ 
Sbjct: 61  SSTVAVNSIDRDPSDFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEANRSYEANLQV 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           +KQ+ D+++ T+DL+R+
Sbjct: 121 VKQARDLISMTIDLMRN 137


>gi|302342345|ref|YP_003806874.1| flagellar basal-body rod protein FlgC [Desulfarculus baarsii DSM
           2075]
 gi|301638958|gb|ADK84280.1| flagellar basal-body rod protein FlgC [Desulfarculus baarsii DSM
           2075]
          Length = 147

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 18/149 (12%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           MD+ + S  I+ SGL+ Q  R+ IIS+N+ANA TT    G  PYRR+             
Sbjct: 1   MDF-VTSMEISASGLSAQRTRLNIISQNLANAETTRTAEGG-PYRRRVTVMSAQPFVSHL 58

Query: 56  -----------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                          GV V +I  D S F +  DP HP A+A G V YPNV+V+ E  ++
Sbjct: 59  EQAIDSPPQQQDPRKGVLVNEIAQDNSPFKKVHDPSHPDADADGYVLYPNVDVVTEMVNL 118

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  +  S +M    L++ R
Sbjct: 119 ISATRSYEANVSAVGASKNMALKALEIAR 147


>gi|34498342|ref|NP_902557.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
 gi|34104196|gb|AAQ60555.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
          Length = 136

 Score =  179 bits (456), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    +I+ S L+ QS R+ +++ N+ANA +   + G  PY+ + + F  V   +     
Sbjct: 3   LSNLFNISGSALSAQSMRLNVVASNLANAESATSSTG-QPYKGRHVVFTAVPVDAAQPQV 61

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GVRV  +  DQS    +++PG+P+A+  G V  PNVNV+ E ADM   +R Y  N++ +
Sbjct: 62  AGVRVTSVVEDQSPPRLKYEPGNPLADERGYVTMPNVNVVEEMADMIAASRAYQNNVEMM 121

Query: 119 KQSHDMMTTTLDLLR 133
             +  ++  TL L +
Sbjct: 122 NTAKSLLQKTLQLGQ 136


>gi|118581824|ref|YP_903074.1| flagellar basal-body rod protein FlgC [Pelobacter propionicus DSM
           2379]
 gi|118504534|gb|ABL01017.1| flagellar basal-body rod protein FlgC [Pelobacter propionicus DSM
           2379]
          Length = 145

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           MD+  ++ +++ S L+ +  RM +IS N+ANA  T  TP   PY+RK   F         
Sbjct: 1   MDF-FSAMNVSASALSAERTRMNLISSNLANANATR-TPEGGPYKRKDAVFAATPVEGRF 58

Query: 54  --VMHGSG-----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
              + G+       V V+++  DQS    ++DP HP AN  G V  PNVNV+ E ADM  
Sbjct: 59  ARALDGAANREIRQVEVQQVVEDQSPPRIQYDPSHPDANPQGYVAMPNVNVIEEMADMIG 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+  ++ +  M    L++ +
Sbjct: 119 ASRTYEANVTAVQTAKSMALKALEISK 145


>gi|91792662|ref|YP_562313.1| flagellar basal body rod protein FlgC [Shewanella denitrificans
           OS217]
 gi|91714664|gb|ABE54590.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
           OS217]
          Length = 138

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           L     ++ SG+A QS R+   + NIANA +   +     YR +   FE  ++       
Sbjct: 3   LFNIFDVSGSGMAAQSIRLNTTASNIANADSVSSSVD-KTYRARHPIFEAELNKAHDQQN 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ GV+V+ I       ++E+ P HP+A+  G +  PNVNV+ E ADM   +R Y  N+Q
Sbjct: 62  GTKGVQVRAIVESDKPLLKEYSPSHPMADGDGFIYKPNVNVMEEMADMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+  TL + +
Sbjct: 122 VADATKTMLQQTLRMGK 138


>gi|218516085|ref|ZP_03512925.1| flagellar basal body rod protein FlgC [Rhizobium etli 8C-3]
          Length = 132

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 81/130 (62%), Positives = 102/130 (78%), Gaps = 3/130 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR---V 63
           +  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + GV    V
Sbjct: 1   AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASGVETVNV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           KK+GVD+  F  EFDP +P A+A G+VK PNVNVLVE ADMRE NR Y ANLQTIKQ+ D
Sbjct: 61  KKVGVDEGDFSTEFDPSNPAADAKGVVKLPNVNVLVEMADMREANRSYDANLQTIKQTRD 120

Query: 124 MMTTTLDLLR 133
           ++++T+DLL+
Sbjct: 121 LISSTIDLLK 130


>gi|254473329|ref|ZP_05086726.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
 gi|211957445|gb|EEA92648.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
          Length = 139

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 74/136 (54%), Positives = 101/136 (74%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L+AS  I++SGL VQS RM+I+SEN+AN ++TGDTPG++PY+RKTI+F+  +  + G
Sbjct: 2   IDPLVASLKISSSGLRVQSQRMRIVSENLANVQSTGDTPGANPYQRKTITFKSEVDRALG 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VK IG D+  +  EFDP HP A+ +G VKYPNVN L+E ADMRE +R Y A LQ 
Sbjct: 62  ANLVAVKNIGSDKGDYRVEFDPSHPAADENGNVKYPNVNTLIELADMREASRSYEAGLQM 121

Query: 118 IKQSHDMMTTTLDLLR 133
           + +S +M+T T+DLLR
Sbjct: 122 MVKSREMITRTIDLLR 137


>gi|154686035|ref|YP_001421196.1| flagellar basal body rod protein FlgC [Bacillus amyloliquefaciens
           FZB42]
 gi|154351886|gb|ABS73965.1| FlgC [Bacillus amyloliquefaciens FZB42]
          Length = 150

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 18/147 (12%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTP---GSDPYRRKTIS-------FEEV 54
             S +I+ S L  Q  RM ++S N+AN  TT          PYRRK +S       F  +
Sbjct: 4   FQSLNISGSALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKLVSLQSGGESFSSL 63

Query: 55  MH--------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           +H           GV+V  +  D S F   +DP +P AN  G V+ PNV+ L E  D+  
Sbjct: 64  LHSKMNGTGSAGNGVKVSGVTEDPSAFNLVYDPENPDANKDGYVQKPNVDPLKEMVDLVS 123

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + R Y AN+  +  S  M+   L++ +
Sbjct: 124 STRSYEANVTALNASKGMLLKALEIGK 150


>gi|302387782|ref|YP_003823604.1| flagellar basal-body rod protein FlgC [Clostridium saccharolyticum
           WM1]
 gi|302198410|gb|ADL05981.1| flagellar basal-body rod protein FlgC [Clostridium saccharolyticum
           WM1]
          Length = 148

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 19/150 (12%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------ 54
           M +L +S +I+ S +  Q  R+ I SENIAN  TT  T    PYRRK +  E        
Sbjct: 1   MSFL-SSMNISASAMTAQRLRLDIASENIANIDTTR-TEAGGPYRRKMVVLEARSENNFR 58

Query: 55  -----------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                         +GG+RV +I  D S F   + P HP A+ +G V+ PNV+++ ET D
Sbjct: 59  RTLMNAAGLGRQQSTGGIRVSQIVEDASPFKSVYSPEHPDADENGYVQMPNVDLIKETVD 118

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                R Y AN+        M +  L++ +
Sbjct: 119 SMSATRSYEANITAFNAIKFMASKALEIGK 148


>gi|118588700|ref|ZP_01546108.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
 gi|118438686|gb|EAV45319.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
          Length = 136

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/136 (47%), Positives = 81/136 (59%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD LI S  I+ SGL  Q+ RM+II+ENIANA +T  TP   PYRRK  +F+       G
Sbjct: 1   MD-LIKSLFISASGLRAQNGRMRIIAENIANANSTAKTPEELPYRRKIPTFKSHFDREMG 59

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V + KI  D + F     PGHP A+A+G V  PNVN L+ET DMRE  R Y ANL  
Sbjct: 60  ADMVELGKIAEDNTDFRSVLMPGHPAADANGYVLQPNVNTLIETTDMREAQRSYEANLNV 119

Query: 118 IKQSHDMMTTTLDLLR 133
           I  +  M+  T+D+LR
Sbjct: 120 IDSTRKMLQRTIDILR 135


>gi|255523706|ref|ZP_05390672.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
 gi|296186710|ref|ZP_06855112.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
 gi|255512575|gb|EET88849.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
 gi|296048747|gb|EFG88179.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
          Length = 144

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 51/141 (36%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
             +  I+ SGL+ +  RM  I+ NIAN  TT    G  PYRRK   F+E ++        
Sbjct: 5   FNNLRISASGLSAERLRMDTIASNIANVDTTRGANG-QPYRRKIAVFQENLNTQLNKQNG 63

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+   I  D+S     +DP +P A+A G V  PNVNVL E ADM    R Y 
Sbjct: 64  KYEQTPLGVKAVGIVDDESPLRRVYDPSNPDADAQGYVSKPNVNVLNEMADMMVATRAYE 123

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN+  I     M +  L++ R
Sbjct: 124 ANIDAISSEKTMFSKALEIGR 144


>gi|119775452|ref|YP_928192.1| flagellar basal body rod protein FlgC [Shewanella amazonensis SB2B]
 gi|119767952|gb|ABM00523.1| flagellar basal-body rod protein FlgC [Shewanella amazonensis SB2B]
          Length = 137

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------HG 57
           L    +++ SG++ QS R+   + NIANA +   +     YR +   FE  +        
Sbjct: 3   LFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVD-KTYRARHPVFEAELAKASQQQS 61

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV VK I        +E++P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q 
Sbjct: 62  ARGVNVKGIVESDKPLQKEYNPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
              +  M+  TL + +
Sbjct: 122 ADTAKSMLMQTLRMGK 137


>gi|259907632|ref|YP_002647988.1| Flagellar basal-body rod protein, FlgC [Erwinia pyrifoliae Ep1/96]
 gi|224963254|emb|CAX54738.1| Flagellar basal-body rod protein, FlgC [Erwinia pyrifoliae Ep1/96]
 gi|283477474|emb|CAY73390.1| Flagellar basal-body rod protein flgC [Erwinia pyrifoliae DSM
           12163]
 gi|310764862|gb|ADP09812.1| Flagellar basal-body rod protein, FlgC [Erwinia sp. Ejp617]
          Length = 134

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L +   I+ S +A QS R+ + + N+ANA +    P   PYR + ++FE      +  GG
Sbjct: 3   LFSVFDISGSAMAAQSKRLNVSASNMANADSVVG-PDGQPYRARQVTFEVDAAAGNEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++    +     ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  
Sbjct: 62  VKVGEVVESSAPDRLVYEPGNPLADQQGYVRMPNVNVVDEMVNTLSASRSYQANVEVMNS 121

Query: 121 SHDMMTTTLDLLR 133
           +  MM  TL L +
Sbjct: 122 AKAMMLKTLSLGQ 134


>gi|260886629|ref|ZP_05897892.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
 gi|330839539|ref|YP_004414119.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
 gi|260863772|gb|EEX78272.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
 gi|329747303|gb|AEC00660.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
          Length = 147

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 69/146 (47%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           +      + SGL  +  RM +IS NIANA TT    G  PY R+ + F+    G      
Sbjct: 3   MFGGIDASASGLTAERLRMDVISNNIANANTTRSVEGG-PYHRRYVVFQPRERGKEDFAS 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GVR  KI  D+S     +DPGHP ANA G V+ PN+N++ E  DM   
Sbjct: 62  TLRQKLDNQAGNGVRAMKIEEDRSQGPLVYDPGHPDANADGYVERPNINIVQEMVDMITA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN+  I  +  M    L++ +
Sbjct: 122 SRAYEANVTAINAAKGMAQNALNIGK 147


>gi|94312667|ref|YP_585876.1| flagellar basal body rod protein FlgC [Cupriavidus metallidurans
           CH34]
 gi|93356519|gb|ABF10607.1| flagellar basal body rod protein FlgC [Cupriavidus metallidurans
           CH34]
          Length = 135

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 5/133 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GG 60
           ++   +A S +A QS RM + + N+ANA +    P   PYR K + FE          GG
Sbjct: 4   MSIFDVAGSAMAAQSQRMNVTASNLANADS-AVAPNGQPYRAKQVIFEMAPTPGQSDVGG 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +  D +      +P HP+A+A+G V  PNVN + E  +M   +R Y AN++ +  
Sbjct: 63  VQVAGVMEDTAPARMVHNPSHPLADANGYVTMPNVNPVEEMVNMISASRSYQANVEVLNT 122

Query: 121 SHDMMTTTLDLLR 133
           + +MM  TL + +
Sbjct: 123 AKNMMLKTLTIGQ 135


>gi|114562340|ref|YP_749853.1| flagellar basal body rod protein FlgC [Shewanella frigidimarina
           NCIMB 400]
 gi|114333633|gb|ABI71015.1| flagellar basal-body rod protein FlgC [Shewanella frigidimarina
           NCIMB 400]
          Length = 138

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L    +++ SG++ QS R+   + NIANA +   +     YR +   FE  M       +
Sbjct: 3   LFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVD-KTYRARHPVFEAEMLKANSQQN 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV VK I       ++E+ P HP+A+  G +  PNVNV+ E ADM   +R Y  N+Q
Sbjct: 62  SSPGVTVKGIVESDKPLLKEYSPDHPMADGDGFIYKPNVNVMEEMADMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+  TL + +
Sbjct: 122 VADATKSMLQQTLRMGK 138


>gi|291519599|emb|CBK74820.1| flagellar basal-body rod protein FlgC [Butyrivibrio fibrisolvens
           16/4]
          Length = 151

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 20/149 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     I  +GL  Q  RM II+ENIAN  TT    G  PYRRK ++F E  + +G    
Sbjct: 3   LFQPFDIVATGLTAQRFRMDIIAENIANVSTTRTQNGG-PYRRKIVTFTEKNYHAGIPNF 61

Query: 60  --------------GVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                         GV+V K+  D ++ F+ E+DP HP A+ +G V+YPNVN + E  ++
Sbjct: 62  KNVLKDKQLRFYGNGVKVSKVSEDTETDFIMEYDPSHPDADENGYVRYPNVNTVTEMTNL 121

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            + +R Y AN+        M    + + +
Sbjct: 122 IDASRSYEANVTAFDAIKSMAGYGIQIGQ 150


>gi|116694217|ref|YP_728428.1| flagellar basal body rod protein [Ralstonia eutropha H16]
 gi|113528716|emb|CAJ95063.1| flagellar basal body rod protein [Ralstonia eutropha H16]
          Length = 135

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 5/135 (3%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---- 58
             +    +A S +A QS RM + + N+ANA +    P    YR K + F           
Sbjct: 2   PAMNIFDVAGSAMAAQSQRMNVTASNLANADSVVS-PDGQAYRAKQVVFGMAPTPGQTDI 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGV+V+ +  D S      +P HP+ANA G V  PNVN + E  +M   +R Y AN++ +
Sbjct: 61  GGVQVRGVSEDPSPPRMVHNPTHPMANAQGYVVMPNVNPVEEMVNMISASRSYQANVEVL 120

Query: 119 KQSHDMMTTTLDLLR 133
             + +MM  TL + +
Sbjct: 121 NTAKNMMLKTLTIGQ 135


>gi|148546704|ref|YP_001266806.1| flagellar basal body rod protein FlgC [Pseudomonas putida F1]
 gi|148510762|gb|ABQ77622.1| flagellar basal-body rod protein FlgC [Pseudomonas putida F1]
          Length = 147

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 69/146 (47%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L +  +IA SG++ Q+ R+  ++ NIANA T   +     YR +   F      +     
Sbjct: 3   LSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSID-QTYRARHPVFATTFQNAQAGSS 61

Query: 60  ------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+VK I  DQST    ++P HP AN  G V YPNVNV+ E ADM   
Sbjct: 62  QSLFEDQGEAGQGVQVKGIVEDQSTLEARYEPNHPAANKDGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N + +  +  MM   L L +
Sbjct: 122 SRAFQTNAELMNTAKSMMQKVLTLGQ 147


>gi|294500941|ref|YP_003564641.1| flagellar basal-body rod protein FlgC [Bacillus megaterium QM
           B1551]
 gi|294350878|gb|ADE71207.1| flagellar basal-body rod protein FlgC [Bacillus megaterium QM
           B1551]
          Length = 149

 Score =  178 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 17/147 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTIS--------FE 52
           +  + +I +S L     RM ++S N+ANA TT  T       PY+RK +         F 
Sbjct: 3   IFRNMNITSSALTANRLRMDVVSSNMANAETTRGTYVNGEWQPYKRKMVVIQSDRSPSFS 62

Query: 53  EVM------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            ++      + + GV+V  I  D + F   ++P HP AN  G VK PNV+ L E  D+  
Sbjct: 63  SLLHSEINKNQNNGVKVTDIVEDNTPFNLVYNPTHPDANDQGYVKMPNVDPLKEMTDLIS 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+     +  ++T  L++ +
Sbjct: 123 ATRSYEANVTVFNTNKSILTKALEIGK 149


>gi|332981429|ref|YP_004462870.1| flagellar basal-body rod protein FlgC [Mahella australiensis 50-1
           BON]
 gi|332699107|gb|AEE96048.1| flagellar basal-body rod protein FlgC [Mahella australiensis 50-1
           BON]
          Length = 129

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 3/130 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  + + + SGL  Q  RM IIS+NIANA TT  TP   PY R+   F +    SG V+V
Sbjct: 3   MFDAINNSASGLTAQRLRMDIISQNIANANTTR-TPEGGPYVRQMPVFSQ--SSSGMVQV 59

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           + I  D   F   +DP HP A+ +G V+ PNV+V  E  DM    R Y AN+  I  + +
Sbjct: 60  QAIVSDPRPFKLTYDPSHPDADPNGYVRMPNVDVTEEMVDMVSATRSYEANVTVIDAAKN 119

Query: 124 MMTTTLDLLR 133
           M    +D+ R
Sbjct: 120 MAMRAMDIAR 129


>gi|302037602|ref|YP_003797924.1| flagellar basal-body rod protein FlgC [Candidatus Nitrospira
           defluvii]
 gi|300605666|emb|CBK41999.1| Flagellar basal-body rod protein FlgC [Candidatus Nitrospira
           defluvii]
          Length = 149

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 19/149 (12%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------- 55
            L  S  ++ S L     R+ +I+ N+ANA++T  + G  PYRR+ + F+          
Sbjct: 2   ELTDSLAVSVSALDAHRHRLNVIASNLANAQSTKTSTGG-PYRRRDVVFQAAPVSPTFQK 60

Query: 56  -----------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                          GV+V ++  D+      +DP HP A+  G V  PNVNV+ E  +M
Sbjct: 61  AFKQVTSGPGRQALDGVKVARVIEDKKPGQTVYDPRHPDADKKGFVTMPNVNVMEEMVNM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +R Y AN+Q I  +  M    L++ R
Sbjct: 121 IGASRAYEANVQAINATRTMWNRALEIGR 149


>gi|120613057|ref|YP_972735.1| flagellar basal-body rod protein FlgC [Acidovorax citrulli AAC00-1]
 gi|120591521|gb|ABM34961.1| flagellar basal-body rod protein FlgC [Acidovorax citrulli AAC00-1]
          Length = 134

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           + +   ++ S ++ Q+ R+ +++ N+AN       P    Y+ + + F+       G+ G
Sbjct: 3   MFSIFGVSGSAISAQAQRLNVVASNLANVDAVAG-PDGQAYKARQVVFQTAPMGGEGAAG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  I   Q+      DP HP A+A G V + NVN + E  +M   +R Y  N++ +  
Sbjct: 62  VRVSAISESQAPGKRVLDPTHPQADAEGYVTHSNVNPVEEMVNMISASRSYQNNVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 TKSLLLKTLQMGQ 134


>gi|23099008|ref|NP_692474.1| flagellar basal body rod protein FlgC [Oceanobacillus iheyensis
           HTE831]
 gi|22777236|dbj|BAC13509.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831]
          Length = 151

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD----PYRRKTISFEEVMHG-- 57
           +  S + + SGL  Q  RM I+S N+ANA++T  T   D    PYRRK ++ +   +   
Sbjct: 3   IFNSMNTSASGLTAQRLRMDIVSSNVANAQSTRATINEDGEFEPYRRKMVTLQSEQNQFK 62

Query: 58  -------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                        + GV+   I  D + F   ++P HP AN  G V+ PNV+ L E  D+
Sbjct: 63  NVLKHATSSSSTSTSGVKATSITEDNTPFNLVYNPQHPDANEQGYVEMPNVDPLKEMVDL 122

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+     S  M+   L++ +
Sbjct: 123 MSATRSYEANITAFNASKGMLMKALEIGK 151


>gi|188590422|ref|YP_001920200.1| flagellar basal body rod protein FlgC [Clostridium botulinum E3
           str. Alaska E43]
 gi|188500703|gb|ACD53839.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E3
           str. Alaska E43]
          Length = 135

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 3/132 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
             S  I+ +G++ +  RM  I+ N+ NA TT    GS PY RK   F+E +  +    G+
Sbjct: 4   FTSMQISATGISAERLRMDTITSNMTNASTTRSADGSGPYVRKIAVFQEALDENRKMAGI 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +  KI  D+S   + ++P HP A+ +G V  PNVNVL E ADM  + R Y AN++T+   
Sbjct: 64  KPAKIVEDKSPLRKVYNPTHPDADETGYVTMPNVNVLNEMADMMVSTRSYEANVETLNAL 123

Query: 122 HDMMTTTLDLLR 133
             M +  L++ +
Sbjct: 124 KGMFSKALEIGK 135


>gi|104782845|ref|YP_609343.1| flagellar basal body rod protein FlgC [Pseudomonas entomophila L48]
 gi|95111832|emb|CAK16556.1| flagellar cell-proximal portion of basal-body rod FlgC [Pseudomonas
           entomophila L48]
          Length = 147

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L +  +IA SG++ Q+ R+  ++ NIANA T   +     YR +   F      + G   
Sbjct: 3   LASVFNIAGSGMSAQNTRLNTVASNIANAETVSSSLD-QTYRARHPVFATTFQQAQGGVG 61

Query: 61  -------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                        V+VK I  DQS     ++P HP AN  G V YPNVNV+ E ADM   
Sbjct: 62  QSLFEDQGEAGQGVQVKGIIEDQSNLEARYEPNHPAANKDGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N + +  +  MM   L L +
Sbjct: 122 SRAFQTNAELMNTAKTMMQKVLTLGQ 147


>gi|23009956|ref|ZP_00050814.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 136

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/136 (45%), Positives = 83/136 (61%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD++  S  IA SGL  QS RM+II+ENIANA +T  T G +PYRRK  +F         
Sbjct: 1   MDFM-KSLGIAASGLKAQSGRMRIIAENIANADSTAKTAGGEPYRRKVPTFASRFDRELD 59

Query: 61  VRV---KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            +V    +I  D S F  ++DPG+P A+A G V+ PNVN L+E  DMRE  R Y ANL  
Sbjct: 60  AKVIEAGRIARDPSPFRTKYDPGNPAADARGEVRLPNVNGLIENMDMREAQRSYEANLNM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  M++ TLD+L+
Sbjct: 120 VTATRRMISRTLDILK 135


>gi|269792948|ref|YP_003317852.1| flagellar basal-body rod protein FlgC [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100583|gb|ACZ19570.1| flagellar basal-body rod protein FlgC [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 139

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 50/136 (36%), Positives = 65/136 (47%), Gaps = 8/136 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
             S  +A S L      M  IS N+AN  TT  TP   PY R+   F+E +         
Sbjct: 4   FRSVDVAGSALTAHRVWMDAISSNLANVNTTR-TPEGGPYVRRVPIFQERLMAAMKDGST 62

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           S GV+V  I  D       + P HP AN  G V YPNVNV+ E ADM   +R Y ANL  
Sbjct: 63  SSGVKVVAIERDPLPPRMVYQPDHPDANQEGYVAYPNVNVVREMADMMVASRAYEANLTV 122

Query: 118 IKQSHDMMTTTLDLLR 133
           ++    M  + +D++R
Sbjct: 123 VETGKAMWNSAIDIMR 138


>gi|160880851|ref|YP_001559819.1| flagellar basal-body rod protein FlgC [Clostridium phytofermentans
           ISDg]
 gi|160429517|gb|ABX43080.1| flagellar basal-body rod protein FlgC [Clostridium phytofermentans
           ISDg]
          Length = 150

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 20/149 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +    +I+ SG++ Q  RM IIS+NIAN  TT D    +PYRRKT+ F E   GS     
Sbjct: 3   IFNGMNISASGMSAQRLRMDIISQNIANVETTRD-ENGNPYRRKTVVFSERESGSFGTVL 61

Query: 59  -------------GGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                         GV+V  I  D  +     ++P HP A+  G V  PNVN + E  ++
Sbjct: 62  AQKAASKASDTQGNGVKVTAIVEDHVTAMKRVYNPSHPDADQDGYVTMPNVNTVTEMTNL 121

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+     + +M+   L++ +
Sbjct: 122 ISATRSYEANVTAFNATKNMLLKGLEVGK 150


>gi|319649569|ref|ZP_08003725.1| flagellar basal-body rod protein C [Bacillus sp. 2_A_57_CT2]
 gi|317398731|gb|EFV79413.1| flagellar basal-body rod protein C [Bacillus sp. 2_A_57_CT2]
          Length = 150

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 18/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           +  S +   S L  Q  RM +IS N+ANA +T    G  PYRRK++  E           
Sbjct: 3   MFHSMNNTASALTAQRLRMDVISSNMANADSTRSVNGDGPYRRKSVVLEPKEGQFSSFLN 62

Query: 54  -------VMHGSGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                        GV+V +I  D ++     +DP H  AN  G V+ PNV+ L E  D+ 
Sbjct: 63  MAMSRRGESSAGNGVKVSRIVEDRETPTKMVYDPTHADANEDGYVEMPNVDPLREMTDLI 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+     S  MM   L++ +
Sbjct: 123 SATRSYEANVTVFNASKGMMMKALEIGK 150


>gi|326319095|ref|YP_004236767.1| flagellar basal-body rod protein FlgC [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375931|gb|ADX48200.1| flagellar basal-body rod protein FlgC [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 134

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           + +   ++ S ++ Q+ R+ +++ N+AN       P    Y+ + + F+       G+ G
Sbjct: 3   MFSIFGVSGSAISAQAQRLNVVASNLANVDAVAG-PDGQAYKARQVVFQTAPMGDEGAAG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  I   Q+      DP HP A+A G V + NVN + E  +M   +R Y  N++ +  
Sbjct: 62  VRVSAISESQAPGKRVLDPTHPQADAEGYVTHSNVNPVEEMVNMISASRSYQNNVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 TKSLLLKTLQMGQ 134


>gi|229918625|ref|YP_002887271.1| flagellar basal-body rod protein FlgC [Exiguobacterium sp. AT1b]
 gi|229470054|gb|ACQ71826.1| flagellar basal-body rod protein FlgC [Exiguobacterium sp. AT1b]
          Length = 142

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 9/139 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG--- 57
           +  S HI+ S L  Q  RM  +S NIANA+TT          PY RK    +E       
Sbjct: 3   MFDSFHISASALTSQRLRMDTVSANIANAQTTRGKLVDGEWQPYTRKMTVLQEAPFRKRL 62

Query: 58  ---SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              +GGV+V +I  D + +   ++P HP A+  G V+ PNV++L E  D+    R Y AN
Sbjct: 63  DAVNGGVQVSQIIEDDAPYKLVYNPNHPDADERGYVQMPNVDLLKEMVDLMGATRSYEAN 122

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           +  +  S  M+   +++ +
Sbjct: 123 IAAMNASKAMLVKAMEIGK 141


>gi|26991079|ref|NP_746504.1| flagellar basal body rod protein FlgC [Pseudomonas putida KT2440]
 gi|24986114|gb|AAN69968.1|AE016635_4 flagellar basal-body rod protein FlgC [Pseudomonas putida KT2440]
 gi|313497759|gb|ADR59125.1| FlgC [Pseudomonas putida BIRD-1]
          Length = 147

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L +  +IA SG++ Q+ R+  ++ NIANA T   +     YR +   F      +     
Sbjct: 3   LSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSID-QTYRARHPVFATTFQNAQAGSS 61

Query: 60  ------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+VK I  DQST    ++P HP AN  G V YPNVNV+ E ADM   
Sbjct: 62  QSLFEDQGEAGQGVQVKGIVEDQSTLEARYEPNHPAANKDGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N + +  + +MM   L L +
Sbjct: 122 SRAFQTNAELMNTAKNMMQKVLTLGQ 147


>gi|222055648|ref|YP_002538010.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
 gi|221564937|gb|ACM20909.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
          Length = 139

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 52/138 (37%), Positives = 68/138 (49%), Gaps = 11/138 (7%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
           + +  I+ S L  +  RM +IS N+ANA +T    G   YRRK   F  V+ G+      
Sbjct: 1   MDAMEISASALTAERTRMNLISSNLANANSTRTDEGGQ-YRRKDAVFATVLDGASANMEG 59

Query: 60  -----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                GV V  I  DQS    ++DPGHP A   G V YPNVN++ E ADM    R Y AN
Sbjct: 60  GTEVIGVEVVNIIEDQSPPRLQYDPGHPDAREDGYVAYPNVNIVEEMADMVTATRAYEAN 119

Query: 115 LQTIKQSHDMMTTTLDLL 132
              +K   DM    L++ 
Sbjct: 120 TTAMKAGMDMQMKALEIG 137


>gi|77460471|ref|YP_349978.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
           Pf0-1]
 gi|77384474|gb|ABA75987.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 147

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L +  +IA SG++ Q+ R+  ++ NIANA T   +     YR +   F  +  G      
Sbjct: 3   LSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSID-QTYRARHPVFATMFQGGQSGGS 61

Query: 60  ------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+V  +  DQS     ++P HP A+A G V YPNVNV+ E ADM   
Sbjct: 62  NSLFQNQDAAGQGVQVMGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N + +  +  MM   L L +
Sbjct: 122 SRSFQTNAEMMNTAKTMMQKVLTLGQ 147


>gi|312962590|ref|ZP_07777080.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens WH6]
 gi|311283170|gb|EFQ61761.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens WH6]
          Length = 147

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L +  +IA SG++ Q+ R+  ++ NIANA T   +     YR +   F  +         
Sbjct: 3   LSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSID-QTYRARHPVFATMFQAGQNGGS 61

Query: 60  ------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+V  +  DQS     ++P HP AN  G V YPNVNV+ E ADM   
Sbjct: 62  DSLFQEQDAAGKGVQVLGVVEDQSNLEARYEPNHPAANEKGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N + +  +  MM   L L +
Sbjct: 122 SRSFQTNAEMMNTAKTMMQKVLTLGQ 147


>gi|294140182|ref|YP_003556160.1| flagellar basal-body rod protein FlgC [Shewanella violacea DSS12]
 gi|293326651|dbj|BAJ01382.1| flagellar basal-body rod protein FlgC [Shewanella violacea DSS12]
          Length = 138

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L    ++A SG++ QS R+   + NIANA +   +     YR +   FE  M        
Sbjct: 3   LFNIFNVAGSGMSAQSIRLNTTASNIANADSVSSSVD-KTYRARHPIFEAEMAKASYQQQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S  V+VK I    +  ++E+ P HP+A+  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  SSPSVKVKGIVESDAPLLKEYSPNHPMADGDGFIYKPNVNVMEEMANMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  M+  TL + +
Sbjct: 122 VAEAAKSMLQQTLRIGK 138


>gi|304316910|ref|YP_003852055.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778412|gb|ADL68971.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 149

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 18/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            + S  I+ +GL  +  RM +IS+NIAN  TT  + G  PYRRK +  +E+ + +     
Sbjct: 3   FLNSIDISATGLTAERLRMDVISQNIANVDTTRTSNGG-PYRRKLVVLKEIDNQNSFSDM 61

Query: 59  -----------GGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                       GV V  I  D ++     +DPG+P A+ +G V YPNVN++ E  DM  
Sbjct: 62  LNTAKGIQAVGNGVEVVSIVDDNKTPLNRVYDPGNPDADNTGYVNYPNVNIVSEMVDMIS 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  +  +  M+   L++ +
Sbjct: 122 ATRAYEANVTAVNSAKSMIEKALEIGK 148


>gi|292489135|ref|YP_003532022.1| flagellar basal-body rod protein FlgC [Erwinia amylovora CFBP1430]
 gi|292900254|ref|YP_003539623.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291200102|emb|CBJ47228.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291554569|emb|CBA22184.1| Flagellar basal-body rod protein flgC [Erwinia amylovora CFBP1430]
 gi|312173293|emb|CBX81548.1| Flagellar basal-body rod protein flgC [Erwinia amylovora ATCC
           BAA-2158]
          Length = 134

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L +   I+ S +A QS R+ + + N+ANA +    P   PYR + ++FE      +  GG
Sbjct: 3   LFSVFDISGSAMAAQSKRLNVSASNMANADSAVG-PDGQPYRARQVTFEVDAAAGNEIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++    +     ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  
Sbjct: 62  VKVGEVVESSAPDRLVYEPGNPLADQQGYVRMPNVNVVDEMVNTLSASRSYQANVEVMNS 121

Query: 121 SHDMMTTTLDLLR 133
           +  MM  TL L +
Sbjct: 122 AKAMMLKTLSLGQ 134


>gi|302384099|ref|YP_003819922.1| flagellar basal-body rod protein FlgC [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194727|gb|ADL02299.1| flagellar basal-body rod protein FlgC [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 144

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/129 (45%), Positives = 81/129 (62%), Gaps = 1/129 (0%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-HGSGGVRVK 64
           ++  +A S L  Q +RM+II+ENIANA +T  T G  PYRR+   FE     G+ GV + 
Sbjct: 15  SAMAVAASALTAQQSRMRIIAENIANAESTARTAGGQPYRRQIPVFEARQIDGATGVSLA 74

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           ++  DQS F  E+DP HP A+A G V  PNV+ L+E+ DMRE  R Y ANL  I+ +  M
Sbjct: 75  EVRPDQSDFRREYDPSHPAADADGYVLRPNVDSLIESMDMREAQRAYEANLNVIETARTM 134

Query: 125 MTTTLDLLR 133
            + TLD+L+
Sbjct: 135 ESRTLDILK 143


>gi|255021352|ref|ZP_05293400.1| Flagellar basal-body rod protein flgC [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969215|gb|EET26729.1| Flagellar basal-body rod protein flgC [Acidithiobacillus caldus
           ATCC 51756]
          Length = 138

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 8/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L +   +A+S L  QS R+ +++ N+ANA +   +    PYR + + F      SG    
Sbjct: 3   LFSVLDVASSALTAQSYRLNVVASNLANANS-ATSSDGQPYRAREVVFAATPLHSGQAPA 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV+V  +          ++PG+P ANA G V+ PNVN + E  +M   +R Y AN+ 
Sbjct: 62  GVEGVQVAGVVEKPGPLKLVYEPGNPAANAEGYVQMPNVNPVDEMVNMISASRAYQANVN 121

Query: 117 TIKQSHDMMTTTLDLL 132
            +  +  ++  TL L 
Sbjct: 122 VMNTTKALLQKTLTLG 137


>gi|169827118|ref|YP_001697276.1| flagellar basal body rod protein FlgC [Lysinibacillus sphaericus
           C3-41]
 gi|168991606|gb|ACA39146.1| Flagellar basal-body rod protein [Lysinibacillus sphaericus C3-41]
          Length = 153

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 21/151 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG--- 57
           +    +   S L  Q  RM +IS N+AN  TT         +PYRRK+++F         
Sbjct: 3   IFHGMNTTASALTAQRLRMDVISSNMANMDTTRARQVNGEWEPYRRKSVTFTAQEGQFSK 62

Query: 58  --------------SGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                           GV+V +I  D ++ F   +DP HP ANA G V  PNV+ L E  
Sbjct: 63  FMNVALGKDAKSGVGNGVKVTRISEDRETPFKLVYDPTHPDANADGYVNLPNVDPLKEMV 122

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+    R Y AN+     +  M+T  L++ +
Sbjct: 123 DLMSATRSYEANVTVFNANKSMLTKALEIGK 153


>gi|300854206|ref|YP_003779190.1| flagellar basal-body rod protein FlgC [Clostridium ljungdahlii DSM
           13528]
 gi|300434321|gb|ADK14088.1| flagellar basal-body rod protein FlgC [Clostridium ljungdahlii DSM
           13528]
          Length = 143

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 54/144 (37%), Positives = 71/144 (49%), Gaps = 12/144 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE----VMH 56
           M     +  I+ SGL+ +   M  I+ N+ANA TT       PYRRK   F E     + 
Sbjct: 1   MIQAFNTMRISASGLSAERLSMDTIASNMANAETTRGA-DGQPYRRKVAVFGENLSKALD 59

Query: 57  GSG-------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
            +G       GV+V  I  D S F  E+DP +P A+ASG V  PNVN+L E ADM    R
Sbjct: 60  SNGNYGDVPEGVKVVAIKDDTSPFKREYDPTNPDADASGYVSMPNVNILNEMADMMVATR 119

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y ANL  I     M +  L++ +
Sbjct: 120 AYEANLSAINSEKSMFSKALEIGK 143


>gi|126653751|ref|ZP_01725669.1| flagellar basal-body rod protein C [Bacillus sp. B14905]
 gi|126589715|gb|EAZ83851.1| flagellar basal-body rod protein C [Bacillus sp. B14905]
          Length = 153

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 21/151 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG--- 57
           +    +   S L  Q  RM +IS N+AN  TT         +PYRRK+++F         
Sbjct: 3   IFHGMNTTASALTAQRLRMDVISSNMANMDTTRARQVNGEWEPYRRKSVTFTAQEGQFSK 62

Query: 58  --------------SGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                           GV+V +I  D ++ F   +DP HP ANA G V  PNV+ L E  
Sbjct: 63  FMNVALGKDAKSGVGNGVKVTRIAEDRETPFKLVYDPTHPDANADGYVNLPNVDPLKEMV 122

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+    R Y AN+     +  M+T  L++ +
Sbjct: 123 DLMSATRSYEANVTVFNANKSMLTKALEIGK 153


>gi|146341894|ref|YP_001206942.1| flagellar basal body rod protein FlgC [Bradyrhizobium sp. ORS278]
 gi|146194700|emb|CAL78725.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
           [Bradyrhizobium sp. ORS278]
          Length = 141

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 62/133 (46%), Positives = 83/133 (62%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
            + S  IA SGL  Q+ RM++ISENIANA +T    G DPYRRK  +F   +  +   +V
Sbjct: 8   FLRSMTIATSGLRAQAGRMRVISENIANADSTAAKAGGDPYRRKVPTFTSALDRALDAKV 67

Query: 64  K---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
               K+  DQS+F  ++DP +P A+ASG VKYPNVN L+E  DMR+  R Y ANL  I  
Sbjct: 68  VTLGKVVPDQSSFRVKYDPSNPAADASGNVKYPNVNPLIEMTDMRDAQRSYEANLNIIGA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|70731825|ref|YP_261567.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
           Pf-5]
 gi|68346124|gb|AAY93730.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens
           Pf-5]
          Length = 147

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L +  +IA SG++ Q+ R+  ++ NIANA +   +     YR +   F  +  G+     
Sbjct: 3   LASVFNIAGSGMSAQTTRLNTVASNIANAESVSSSID-QTYRARHPVFATMFQGAQSGGS 61

Query: 60  ------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+V  +  DQS     ++P HP A+A G V YPNVNV+ E ADM   
Sbjct: 62  DSLFQNQDAAGQGVQVLGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N + +  +  MM   L L +
Sbjct: 122 SRSFQTNAEMMNTAKTMMQKVLTLGQ 147


>gi|15596275|ref|NP_249769.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PAO1]
 gi|107100523|ref|ZP_01364441.1| hypothetical protein PaerPA_01001548 [Pseudomonas aeruginosa PACS2]
 gi|116049007|ref|YP_792191.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|152984084|ref|YP_001349652.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PA7]
 gi|218892958|ref|YP_002441827.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa
           LESB58]
 gi|254234214|ref|ZP_04927537.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           C3719]
 gi|254239436|ref|ZP_04932758.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 2192]
 gi|296390558|ref|ZP_06880033.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PAb1]
 gi|313106033|ref|ZP_07792292.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           39016]
 gi|9946994|gb|AAG04467.1|AE004539_9 flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa PAO1]
 gi|115584228|gb|ABJ10243.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166145|gb|EAZ51656.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           C3719]
 gi|126192814|gb|EAZ56877.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 2192]
 gi|150959242|gb|ABR81267.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa PA7]
 gi|218773186|emb|CAW28998.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           LESB58]
 gi|310878794|gb|EFQ37388.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           39016]
          Length = 146

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L +  +IA SG++ QS R+  ++ NIANA T   +     YR +   F  +   +     
Sbjct: 3   LASVFNIAGSGMSAQSTRLNTVASNIANAETVSSSVD-KTYRARHPVFSTMFQQAQGDSG 61

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GV+V  I  DQS+ +  ++P HP A+A+G V YPNVNV+ E ADM   +
Sbjct: 62  SLFADQDSSGAGVQVLGIVEDQSSLMPRYEPNHPAADANGYVYYPNVNVVEEMADMISAS 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R +  N + +  +  MM   L L +
Sbjct: 122 RAFQTNAEMMNTAKQMMQKVLTLGQ 146


>gi|288962707|ref|YP_003453001.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288914973|dbj|BAI76457.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 139

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 68/135 (50%), Positives = 88/135 (65%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
           D L A+  IA +GL  QS R+++++EN+ANA +T    G DPYRRKT+SF+ VM    G 
Sbjct: 4   DVLGATLKIAGAGLQAQSTRLRVVAENLANADSTATAKGGDPYRRKTVSFDSVMDRGVGA 63

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VRVK+IG D+S F   +DP HP A+  G VK PNV  LVE  DMRE  R + A++  I
Sbjct: 64  ELVRVKQIGRDRSDFQLAYDPSHPAADDKGYVKKPNVQPLVEMMDMREAGRAFEASMNVI 123

Query: 119 KQSHDMMTTTLDLLR 133
           +QS  MMT  +DLLR
Sbjct: 124 EQSRAMMTRVVDLLR 138


>gi|148380622|ref|YP_001255163.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931376|ref|YP_001384908.1| flagellar basal body rod protein FlgC [Clostridium botulinum A str.
           ATCC 19397]
 gi|153937867|ref|YP_001388377.1| flagellar basal body rod protein FlgC [Clostridium botulinum A str.
           Hall]
 gi|148290106|emb|CAL84225.1| flagellar basal-body rod protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152927420|gb|ABS32920.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
           ATCC 19397]
 gi|152933781|gb|ABS39280.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
           Hall]
          Length = 144

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 49/141 (34%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
             +  I+ SGL+ +  RM  I+ NI+NA TT    G  PY+RK   FEE ++        
Sbjct: 5   FDTMRISASGLSAERLRMDTIASNISNATTTRTENGG-PYKRKIAVFEENLNNELNKKNG 63

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+   I  D S   + +DP HP A+  G V  PNVNVL E ADM  + R Y 
Sbjct: 64  ATEKKLYGVKATGIVEDPSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRTYE 123

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN+  +     M    L++ +
Sbjct: 124 ANVTVMNAEKSMFGKALEIGK 144


>gi|170722894|ref|YP_001750582.1| flagellar basal body rod protein FlgC [Pseudomonas putida W619]
 gi|169760897|gb|ACA74213.1| flagellar basal-body rod protein FlgC [Pseudomonas putida W619]
          Length = 147

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L +  +IA SG++ Q+ R+  ++ NIANA T   +     YR +   F      +     
Sbjct: 3   LSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSID-QTYRARHPVFATTFQNAQAGGS 61

Query: 60  ------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+VK I  DQS     ++P HP AN  G V YPNVNV+ E ADM   
Sbjct: 62  QSLFEDQGEAGQGVQVKGIIEDQSNLEARYEPNHPAANKDGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N + +  + +MM   L L +
Sbjct: 122 SRAFQTNAELMNTAKNMMQKVLTLGQ 147


>gi|311694359|gb|ADP97232.1| flagellar basal-body rod protein FlgC-like protein [marine
           bacterium HP15]
          Length = 149

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 18/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L +   IA SG+  QS R+   + NIANA T   + G + YR +   F  +         
Sbjct: 3   LGSIFDIAGSGMTAQSLRLNTTASNIANAETASSSTG-ETYRARKPVFSAIQQSLMNPGQ 61

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GVRV  I    +     ++P HP AN  G V YPNVNV+ E ADM  
Sbjct: 62  GGLPMAADEGPGAGVRVDGIVESDAELQMRYEPHHPAANEDGYVFYPNVNVVEEMADMMS 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++R +  N+  +  +  MM   L L +
Sbjct: 122 SSRSFQMNVDVMNTAKSMMQRILTLGQ 148


>gi|90423029|ref|YP_531399.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
 gi|90105043|gb|ABD87080.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
          Length = 141

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/136 (49%), Positives = 87/136 (63%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   S  IA SGL  Q+ARM++ISENIANA +T  TPG DPYRRK  +F   +  +  
Sbjct: 6   MDF-SRSMGIATSGLRAQAARMRVISENIANAESTAQTPGGDPYRRKVPTFTSALDRALD 64

Query: 61  VRVKKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            RV  +G    D S F  +++PG+P A+A+G VKYPNVN LVE  DMR+  R Y ANL  
Sbjct: 65  ARVVTLGRVKPDNSNFRVKYEPGNPAADAAGNVKYPNVNPLVEMTDMRDAQRSYEANLNI 124

Query: 118 IKQSHDMMTTTLDLLR 133
           I  +  M+  TLD+L+
Sbjct: 125 ISATRRMIQRTLDILK 140


>gi|308173581|ref|YP_003920286.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens DSM 7]
 gi|307606445|emb|CBI42816.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens DSM 7]
 gi|328553487|gb|AEB23979.1| flagellar basal body rod protein FlgC [Bacillus amyloliquefaciens
           TA208]
 gi|328911722|gb|AEB63318.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens LL3]
          Length = 150

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 18/147 (12%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTP---GSDPYRRKTIS-------FEEV 54
             S +I+ S L  Q  RM ++S N+AN  TT          PYRRK +S       F  +
Sbjct: 4   FQSLNISGSALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKLVSLQSGGESFSSL 63

Query: 55  MH--------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           ++           GV+V  +  D S F   +DP +P AN  G V+ PNV+ L E  D+  
Sbjct: 64  LNSKMNGIGSAGNGVKVSAVTEDPSAFNLVYDPENPDANKDGYVQKPNVDPLKEMVDLVS 123

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + R Y AN+  +  S  M+   L++ +
Sbjct: 124 STRSYEANVTALNASKGMLLKALEIGK 150


>gi|295706287|ref|YP_003599362.1| flagellar basal-body rod protein FlgC [Bacillus megaterium DSM 319]
 gi|294803946|gb|ADF41012.1| flagellar basal-body rod protein FlgC [Bacillus megaterium DSM 319]
          Length = 149

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 17/147 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTIS--------FE 52
           +  + +I +S L     RM ++S N+ANA TT  T       PY+RK +         F 
Sbjct: 3   IFQNMNITSSALTANRLRMDVVSSNMANAETTRGTYVNGEWQPYKRKMVVMQSDRSPSFS 62

Query: 53  EVM------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            V+      + + GV+V  I  D + F   ++P HP AN  G V+ PNV+ L E  D+  
Sbjct: 63  SVLHSEINKNQNNGVKVTDIVEDNTPFNLVYNPTHPDANDQGYVQMPNVDPLKEMTDLIS 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+     +  ++T  L++ +
Sbjct: 123 ATRSYEANVTVFNTNKSILTKALEIGK 149


>gi|260682026|ref|YP_003213311.1| flagellar basal-body rod protein [Clostridium difficile CD196]
 gi|260685624|ref|YP_003216757.1| flagellar basal-body rod protein [Clostridium difficile R20291]
 gi|260208189|emb|CBA60524.1| flagellar basal-body rod protein [Clostridium difficile CD196]
 gi|260211640|emb|CBE01891.1| flagellar basal-body rod protein [Clostridium difficile R20291]
          Length = 128

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 4/129 (3%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRVK 64
             I+ SGL  +S +M IIS N+AN   T   P  + YRRK +SFEE      G  GV+V 
Sbjct: 1   MRISASGLTAESLKMDIISSNVANINATRG-PNGEAYRRKVVSFEENYDNKLGMLGVKVT 59

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D+S   E +DP HP A  +G V+YPNVN+LVE  D+   +R Y +N+ T+     M
Sbjct: 60  SVEDDKSPLKEVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQKSM 119

Query: 125 MTTTLDLLR 133
           ++  L++ +
Sbjct: 120 ISKALEIGK 128


>gi|188534172|ref|YP_001907969.1| flagellar basal body rod protein FlgC [Erwinia tasmaniensis Et1/99]
 gi|188029214|emb|CAO97086.1| Cell-proximal portion of basal-body rod [Erwinia tasmaniensis
           Et1/99]
          Length = 134

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           L+    IA S +A QS R+ + + N+ANA +    P   PY  K + F+        +GG
Sbjct: 3   LLNIFDIAGSAMAAQSQRLNVSASNLANADSV-TGPDGQPYVAKQVVFQTNAAPGSAAGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++  D +     ++PG+P+A+A G VK PNV+V+ ET +    +R Y AN++ +  
Sbjct: 62  VKVAEVIDDPAPARLVYEPGNPMADAKGYVKMPNVDVVAETVNTLSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL + +
Sbjct: 122 VKQMMMKTLTMGQ 134


>gi|311068140|ref|YP_003973063.1| flagellar basal body rod protein FlgC [Bacillus atrophaeus 1942]
 gi|310868657|gb|ADP32132.1| flagellar basal body rod protein FlgC [Bacillus atrophaeus 1942]
          Length = 149

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 17/146 (11%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTIS-------FEEV 54
             S +++ S L  Q  RM ++S N+AN  TT          PYRRK +S       F  +
Sbjct: 4   FQSLNVSGSALTAQRVRMDVVSSNLANMDTTRAKQVDGEWVPYRRKLVSLQSNGESFSSI 63

Query: 55  M-------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           +           GV+V K+  D S F   +DP +P AN  G V+ PNV+ L E  D+  +
Sbjct: 64  LHSRMSSGDAGNGVKVTKVTEDDSDFNLVYDPTNPDANEEGYVQKPNVDPLKEMVDLVSS 123

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+  +  S  M+   L++ +
Sbjct: 124 TRSYEANVTAMNASKGMLLKALEIGK 149


>gi|16125206|ref|NP_419770.1| flagellar basal body rod protein FlgC [Caulobacter crescentus CB15]
 gi|221233942|ref|YP_002516378.1| flagellar basal body rod protein FlgC [Caulobacter crescentus
           NA1000]
 gi|13422230|gb|AAK22938.1| flagellar basal-body rod protein FlgC [Caulobacter crescentus CB15]
 gi|220963114|gb|ACL94470.1| flagellar basal-body rod protein flgC [Caulobacter crescentus
           NA1000]
          Length = 139

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 60/130 (46%), Positives = 86/130 (66%), Gaps = 1/130 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGGVRV 63
           +A+  +A+S L  Q  RM++I+ENIANA +T  T G DPYRR+   F+   + G  GV++
Sbjct: 9   LATMAVASSALRAQQGRMRVIAENIANAHSTARTAGGDPYRRQVPVFKPTTVQGGEGVQM 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            ++  DQS F  E+DPG+P A+A G VK PNVN +VE+ DM+E  R Y ANL  I+ +  
Sbjct: 69  LRVDPDQSAFKTEYDPGNPAADAKGYVKLPNVNTMVESLDMKEAQRAYEANLNVIETARS 128

Query: 124 MMTTTLDLLR 133
           M + TLD+L+
Sbjct: 129 MQSRTLDILK 138


>gi|301631992|ref|XP_002945075.1| PREDICTED: flagellar basal-body rod protein flgC-like [Xenopus
           (Silurana) tropicalis]
          Length = 134

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           + +  +++ S ++ QS R+ +++ N+AN       P    Y+ + + F+        + G
Sbjct: 3   IFSIFNVSGSAISAQSQRLNVVASNLANVDAVAG-PDGQAYKARQVVFQTTPMGSDSAAG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV+ I   Q      FDPGHP A+  G V + NVN + E  +M   +R Y  N++ +  
Sbjct: 62  VRVRSIEESQVPGRRVFDPGHPSADGEGYVNHSNVNAVEEMVNMISASRSYQNNVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 AKTLLLKTLQMGQ 134


>gi|309388815|gb|ADO76695.1| flagellar basal-body rod protein FlgC [Halanaerobium praevalens DSM
           2228]
          Length = 143

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 55/142 (38%), Positives = 71/142 (50%), Gaps = 15/142 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           +     I+ SGL  Q  RM  IS NIANA TT D    + YRRKT  F + +        
Sbjct: 1   MFKGIDISASGLTAQRLRMDTISSNIANAETTRD-ENGNTYRRKTPIFRQKLENKMGAAE 59

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                   SGGV V +I  DQS F  E+ P HP AN  G V+ PNV+V+ E  +M + +R
Sbjct: 60  VGNGSSLNSGGVEVDQIAEDQSPFRLEYRPNHPDANEEGYVELPNVSVMTEMVNMIDASR 119

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            Y AN Q I     M  + L++
Sbjct: 120 AYEANTQAISNYKSMANSALNI 141


>gi|299131775|ref|ZP_07024970.1| flagellar basal-body rod protein FlgC [Afipia sp. 1NLS2]
 gi|298591912|gb|EFI52112.1| flagellar basal-body rod protein FlgC [Afipia sp. 1NLS2]
          Length = 141

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 65/137 (47%), Positives = 85/137 (62%), Gaps = 5/137 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+L  S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  +  
Sbjct: 5   MDFL-KSMSIATSGLRAQAGRMRVISENIANADSTASTAGGDPYRRKVPTFSSTLDRTLD 63

Query: 61  VRVKKIGV----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +V  +G       S+F  + +PG+P A+A+G VKYPNVN LVE  DMRE  R Y ANL 
Sbjct: 64  AQVVSLGRVKTDTTSSFRIKHEPGNPAADANGNVKYPNVNSLVEMTDMREAQRSYEANLN 123

Query: 117 TIKQSHDMMTTTLDLLR 133
            I  +  M+  TLD+L+
Sbjct: 124 IISATRRMIQRTLDILK 140


>gi|292492361|ref|YP_003527800.1| flagellar basal-body rod protein FlgC [Nitrosococcus halophilus
           Nc4]
 gi|291580956|gb|ADE15413.1| flagellar basal-body rod protein FlgC [Nitrosococcus halophilus
           Nc4]
          Length = 137

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 7/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------G 57
           L     I+ + ++ Q+ R+   + N+ANA +   +     YR +   F  V++       
Sbjct: 3   LFNIIDISGTAMSAQTLRLNTTASNLANADSVSSSVN-QTYRARHPVFATVLNDFNQEEA 61

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +GGV+V  +   ++   +E+ P HP+AN +G + +PNVN + E A+M   +R Y  +++ 
Sbjct: 62  TGGVQVLGVVESKAPLQQEYAPDHPMANEAGYIFHPNVNPIEEMANMISASRSYQNSVEV 121

Query: 118 IKQSHDMMTTTLDLL 132
              S  ++  TL L 
Sbjct: 122 ANTSKQLLLRTLQLG 136


>gi|288553067|ref|YP_003425002.1| flagellar basal body rod protein FlgC [Bacillus pseudofirmus OF4]
 gi|288544227|gb|ADC48110.1| flagellar basal body rod protein FlgC [Bacillus pseudofirmus OF4]
          Length = 151

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 19/149 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVM----- 55
           L +  + + S L  Q  RM +IS N+ANA TT          PYRRK +  E        
Sbjct: 3   LFSGFNASASALTTQRLRMDVISSNMANAETTRARMVDGEWTPYRRKMVVVEPNQKQPFS 62

Query: 56  -----------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                          GV+   I  DQ+ F   +DP HP AN  G V+ PNV+ L E  D+
Sbjct: 63  AFLGNAMKQNSEAGTGVKASAIVEDQNPFKLLYDPTHPDANEDGYVEMPNVDPLREMVDL 122

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+ ++  + +M+   L++ R
Sbjct: 123 MTATRSYEANVTSLNATKNMLMKALEIGR 151


>gi|329297212|ref|ZP_08254548.1| flagellar basal body rod protein FlgC [Plautia stali symbiont]
          Length = 134

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    IA S +  QS R+ + + N+ NA +    P   PY  K + F+        +GG
Sbjct: 3   LLNIFDIAGSAMTAQSQRLNVSASNLDNADSV-TGPDGQPYVAKQVIFQTDAAQGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +  D +     +DPG+P+A+  G VK PNV+V+ ET +    +R Y AN++ +  
Sbjct: 62  VKVAGVVNDPTPAKLVYDPGNPLADQKGYVKMPNVDVVAETVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL + +
Sbjct: 122 VKSMMMKTLTMGQ 134


>gi|120598230|ref|YP_962804.1| flagellar basal body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|146293692|ref|YP_001184116.1| flagellar basal body rod protein FlgC [Shewanella putrefaciens
           CN-32]
 gi|120558323|gb|ABM24250.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|145565382|gb|ABP76317.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
           CN-32]
 gi|319427091|gb|ADV55165.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens 200]
          Length = 138

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L +   +A SG++ QS R+   + NIANA +   +     YR +   FE  M        
Sbjct: 3   LFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSID-KTYRSRHPIFEAEMAKAQSQQQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV V+ I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q
Sbjct: 62  TSQGVTVRGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  M+  TL + +
Sbjct: 122 VAEAAKSMLQQTLGMGK 138


>gi|148256779|ref|YP_001241364.1| flagellar basal body rod protein FlgC [Bradyrhizobium sp. BTAi1]
 gi|146408952|gb|ABQ37458.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
           [Bradyrhizobium sp. BTAi1]
          Length = 141

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 63/133 (47%), Positives = 83/133 (62%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
            + S  IA SGL  Q+ RM++ISENIANA +T    G DPYRRK  +F   +  +   +V
Sbjct: 8   FVRSMSIATSGLRAQAGRMRVISENIANADSTAAKAGGDPYRRKVPTFSSALDRALDAKV 67

Query: 64  K---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
               K+  DQS+F  ++DP +P A+ASG VKYPNVN LVE  DMR+  R Y ANL  I  
Sbjct: 68  VTLGKVVPDQSSFRVKYDPSNPAADASGNVKYPNVNPLVEMTDMRDAQRSYEANLNIIGA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|320535379|ref|ZP_08035493.1| flagellar basal-body rod protein FlgC [Treponema phagedenis F0421]
 gi|320147781|gb|EFW39283.1| flagellar basal-body rod protein FlgC [Treponema phagedenis F0421]
          Length = 152

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 20/150 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           + +S +IA +G++ +  R  +IS+NIANA +T    G  P++R  +   E          
Sbjct: 3   MFSSINIAATGMSAERLRTDVISDNIANASSTRTQEGEGPFKRSRVILSEKNPEVTWRTP 62

Query: 54  -----VMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                +  G G GVRV  I  D +     +DP HP A      +G V+YPNVN++ E  D
Sbjct: 63  FVPDTIDKGVGTGVRVVSIEKDNAPSRLVYDPNHPDAIKSGPNAGYVEYPNVNIVTEMVD 122

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y AN   I  S +M    L++ R
Sbjct: 123 LISASRAYEANASVILGSKEMFQRALEIGR 152


>gi|330811237|ref|YP_004355699.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379345|gb|AEA70695.1| Putative flagellar basal-body rod protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 147

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 17/144 (11%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------ 59
           +  +IA S ++ Q+ R+  ++ NIANA T   +     YR +   F  +  G        
Sbjct: 5   SVFNIAGSAMSAQTTRLNTVASNIANAETVSSSID-QTYRARHPVFATMFQGGQSGGSDS 63

Query: 60  ----------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV+V  +  DQS     ++P HP A+A G V YPNVNV+ E ADM   +R
Sbjct: 64  LFQEQDAAGQGVQVLGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMISASR 123

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            +  N + +  +  MM   L L +
Sbjct: 124 SFQTNAEMMNTAKTMMQKVLTLGQ 147


>gi|291562032|emb|CBL40848.1| flagellar basal-body rod protein FlgC [butyrate-producing bacterium
           SS3/4]
          Length = 149

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 69/148 (46%), Gaps = 19/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVM 55
            + S  I+ SG++ Q  RM I +ENIAN  TT    G  PYRRK +        SF + M
Sbjct: 3   FLGSFDISASGMSAQRVRMDIAAENIANMDTTRTESGG-PYRRKNVLLESYSDTSFAQAM 61

Query: 56  HGSG----------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
             +           GVRV  I  D     + ++P HP A+A G V  PNV+VL ET D  
Sbjct: 62  ENAARGKGITSRHAGVRVSGIVEDDREAKKVYNPDHPDADADGYVTMPNVDVLKETVDSM 121

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+  +     M    L++ +
Sbjct: 122 SATRSYEANVTALNAIKLMAQKALEIGK 149


>gi|224825162|ref|ZP_03698268.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
 gi|224602833|gb|EEG09010.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
          Length = 136

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 6/135 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L     IA S L  QS R+ +++ NIANA +   + G  PY+ + + F  +   +     
Sbjct: 3   LSNVFTIAGSALTAQSMRLNVVASNIANAESATSSTG-QPYQGRHVVFTAIPVSATQPQV 61

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GVRV  +  D +    ++DPG+P+A+  G V  PNVN + E ADM    R Y  N++ +
Sbjct: 62  AGVRVTSVVEDTTPPRLKYDPGNPLADQRGYVNLPNVNPVEEMADMISAARSYQTNVELM 121

Query: 119 KQSHDMMTTTLDLLR 133
             + +++  TL L +
Sbjct: 122 NTAKNLLQKTLQLGQ 136


>gi|153938711|ref|YP_001391964.1| flagellar basal body rod protein FlgC [Clostridium botulinum F str.
           Langeland]
 gi|152934607|gb|ABS40105.1| flagellar basal-body rod protein FlgC [Clostridium botulinum F str.
           Langeland]
 gi|295319981|gb|ADG00359.1| flagellar basal-body rod protein FlgC [Clostridium botulinum F str.
           230613]
          Length = 144

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 13/141 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
             +  I+ SGL+ +  RM  I+ NI+NA TT  T    PY+RK   FEE ++        
Sbjct: 5   FDTMRISASGLSAERLRMDTIASNISNATTTR-TENGGPYKRKIAVFEENLNNELNKKNG 63

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+   I  D S   + +DP HP A+A G V  PNVNVL E ADM  + R Y 
Sbjct: 64  ATEKKLYGVKATGIVEDPSPVRKMYDPSHPDADAEGYVSMPNVNVLNEMADMMASVRTYE 123

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN+  +     M    L++ +
Sbjct: 124 ANVTVMNAEKSMFGKALEIGK 144


>gi|127512277|ref|YP_001093474.1| flagellar basal body rod protein FlgC [Shewanella loihica PV-4]
 gi|126637572|gb|ABO23215.1| flagellar basal-body rod protein FlgC [Shewanella loihica PV-4]
          Length = 139

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 8/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L    ++A SG++ QS R+   + NIANA +   +     YR +   FE  +       +
Sbjct: 3   LFNIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVD-KTYRARHPVFEAELAKASHQQN 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S  V+V  I        +E+ P HP+A+A G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  TSQAVKVAGIVESDKPLQKEYSPDHPLADADGFIYKPNVNVMEEMANMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLL 132
               +  M+  TL + 
Sbjct: 122 VADAAKSMLQQTLRIG 137


>gi|205373369|ref|ZP_03226173.1| flagellar basal body rod protein FlgC [Bacillus coahuilensis m4-4]
          Length = 149

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 17/147 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTIS-------FEE 53
           +  S +I+ S L  Q  RM +IS N+ANA TT          PY RK++        F  
Sbjct: 3   IFQSINISTSALTAQRLRMDVISSNVANADTTRGEYVNGEWQPYTRKSVVLQENQGNFSS 62

Query: 54  VMHGS------GGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           +++ +       GV VK+I  D ++ F   FDP HP A+A G VK PNV+ L E  D+  
Sbjct: 63  LLNQAKNTGSVNGVVVKEIKEDTETPFNLVFDPTHPDADAEGYVKMPNVDPLREMTDLIS 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  +  +  ++  +L++ +
Sbjct: 123 ATRSYEANVTVMNANKALLMKSLEIGK 149


>gi|28869138|ref|NP_791757.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|66046709|ref|YP_236550.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           syringae B728a]
 gi|71737330|ref|YP_275565.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213967584|ref|ZP_03395732.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato T1]
 gi|237799204|ref|ZP_04587665.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806223|ref|ZP_04592927.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|257484951|ref|ZP_05638992.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289627761|ref|ZP_06460715.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651649|ref|ZP_06482992.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298487859|ref|ZP_07005899.1| Flagellar basal-body rod protein flgC [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|301385711|ref|ZP_07234129.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060077|ref|ZP_07251618.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato K40]
 gi|302134836|ref|ZP_07260826.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|302185585|ref|ZP_07262258.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           syringae 642]
 gi|28852378|gb|AAO55452.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|63257416|gb|AAY38512.1| Flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           syringae B728a]
 gi|71557883|gb|AAZ37094.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213927885|gb|EEB61432.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato T1]
 gi|298157584|gb|EFH98664.1| Flagellar basal-body rod protein flgC [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320325091|gb|EFW81160.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329350|gb|EFW85343.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330866420|gb|EGH01129.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330875981|gb|EGH10130.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330880520|gb|EGH14669.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330889087|gb|EGH21748.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           mori str. 301020]
 gi|330899399|gb|EGH30818.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330943205|gb|EGH45612.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           pisi str. 1704B]
 gi|330953719|gb|EGH53979.1| flagellar basal body rod protein FlgC [Pseudomonas syringae Cit 7]
 gi|330961194|gb|EGH61454.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|330967088|gb|EGH67348.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|330972411|gb|EGH72477.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aceris str. M302273PT]
 gi|330975974|gb|EGH76040.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aptata str. DSM 50252]
 gi|330986466|gb|EGH84569.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011040|gb|EGH91096.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331017028|gb|EGH97084.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
 gi|331022059|gb|EGI02116.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027336|gb|EGI07391.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 146

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    +IA S ++ Q+ R+   + NIANA T   +     YR +   F  VM G      
Sbjct: 3   LANVFNIAGSAMSAQTTRLNTTASNIANAETVSSSMD-QTYRARHPVFATVMQGQQSTGG 61

Query: 60  -----------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GV+V  I  D S     ++P HP A+  G V YPNVNV+ E ADM   +
Sbjct: 62  SLFQDQGEAGQGVQVNGIIEDSSNLEARYEPNHPSADKDGYVYYPNVNVVEEMADMISAS 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R +  N + +  +  MM   L L +
Sbjct: 122 RSFQTNAEIMNTAKSMMQKVLTLGQ 146


>gi|240145509|ref|ZP_04744110.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           L1-82]
 gi|257202324|gb|EEV00609.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           L1-82]
 gi|291536000|emb|CBL09112.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           M50/1]
 gi|291538494|emb|CBL11605.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           XB6B4]
          Length = 146

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L  +  I+ SG+  +  RM  I++NIAN  TT  T    PYRRK ++F E          
Sbjct: 3   LFQAFDISASGMTAERFRMDTIAQNIANINTTR-TEDGTPYRRKIVTFAEKTETPFSQYY 61

Query: 58  --------SGGVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GV+V  +  D  +     +DP HP A+ +G V YPNVN + E  ++ +  
Sbjct: 62  ETARARAVGNGVKVTSVKEDDETEMRMVYDPSHPDADENGYVTYPNVNTVTEMTNLIDAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN      +  M+   L++ +
Sbjct: 122 RAYEANTTAFDATKSMVQAALNISK 146


>gi|239628951|ref|ZP_04671982.1| flagellar basal-body rod protein FlgC [Clostridiales bacterium
           1_7_47_FAA]
 gi|239519097|gb|EEQ58963.1| flagellar basal-body rod protein FlgC [Clostridiales bacterium
           1_7_47FAA]
          Length = 144

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 15/146 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           M YL  S +I  S L  +  R  II +N+AN  TT    G  PYRRK + F E       
Sbjct: 1   MGYL-DSLNITGSALTAERFRTDIIMQNLANQNTTRTADGG-PYRRKQVVFRENSLNFKS 58

Query: 54  ------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                     +GGV V+++   Q+  V  +DP HP A+  G V  PNVN   E  D+   
Sbjct: 59  ELGKAMTKAENGGVYVEEVVESQNPLVPVYDPDHPDADEDGYVMMPNVNSAEEMVDLMAA 118

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN+  +  +  M    L++ +
Sbjct: 119 SRAYEANVTALNIAKSMALKALEIGK 144


>gi|187935497|ref|YP_001885039.1| flagellar basal body rod protein FlgC [Clostridium botulinum B str.
           Eklund 17B]
 gi|187723650|gb|ACD24871.1| flagellar basal-body rod protein FlgC [Clostridium botulinum B str.
           Eklund 17B]
          Length = 135

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 3/132 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
             S  I+ +G++ +  RM  I+ N+ N+ TT    GS PY RK   F+E +  +    G+
Sbjct: 4   FTSMQISATGISAERLRMDTITSNMTNSSTTRSADGSGPYVRKIAVFQEALDENRKMAGI 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +  KI  D+S   + + P HP A+ +G V  PNVNVL E ADM  + R Y AN++T+   
Sbjct: 64  KPVKIVEDKSPLRKVYKPTHPDADETGYVTMPNVNVLNEMADMMVSTRSYEANVETLNAL 123

Query: 122 HDMMTTTLDLLR 133
             M +  L++ +
Sbjct: 124 KGMFSKALEIGK 135


>gi|94500239|ref|ZP_01306772.1| flagellar basal-body rod protein FlgC [Oceanobacter sp. RED65]
 gi|94427538|gb|EAT12515.1| flagellar basal-body rod protein FlgC [Oceanobacter sp. RED65]
          Length = 148

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 18/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L    ++A +G+  QS R+   + NIANA T   +   + YR +   F+ +         
Sbjct: 3   LTNVFNVAGTGMNAQSVRLNTTASNIANAETVSSSID-ETYRARKPWFQALQKEWDDIEG 61

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV V  I    +     F+P HP+A+  G V YPNVN++ E  DM  
Sbjct: 62  LSDKLELRKGVGDGVHVAAIVESDAPLKRRFEPHHPMADEEGYVMYPNVNIVEEMTDMMS 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++R Y  N++ +K +  M+  TL L +
Sbjct: 122 SSRSYQMNVEMMKTAKQMLQRTLTLGQ 148


>gi|78042758|ref|YP_359838.1| flagellar basal-body rod protein FlgC [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77994873|gb|ABB13772.1| flagellar basal-body rod protein FlgC [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 138

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-----S 58
             +S  I  S L      +  I +NIANA TT  TP    Y RK + FEE++        
Sbjct: 3   FFSSFQITASALTAHRLWLDTIVDNIANANTTR-TPAGGTYNRKDVIFEEILEAKAGFKG 61

Query: 59  GGVRVKKIGVDQ-STFVEEFDPGHPVANAS-GIVKYPNVNVLVETADMRETNRLYMANLQ 116
           GGVRV +I  D  + +   F+P HP A+ + G+VKYPNVN+  E  ++    R Y AN+ 
Sbjct: 62  GGVRVSQIVEDTKTPYRYVFNPNHPDADPNTGLVKYPNVNINDEIVNLLAAQRAYEANVT 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M    L+L R
Sbjct: 122 VFNTAKAMYAKALELSR 138


>gi|316932834|ref|YP_004107816.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           DX-1]
 gi|315600548|gb|ADU43083.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           DX-1]
          Length = 141

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 63/136 (46%), Positives = 84/136 (61%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  S  
Sbjct: 6   MDF-SRSMAIATSGLRAQAGRMRVISENIANADSTAQTAGGDPYRRKVPTFTSALDRSLD 64

Query: 61  VRVKKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            RV  +G    D S F  +++P +P A+A+G VKYPNVN ++E  DMR+  R Y ANL  
Sbjct: 65  ARVVALGRVKPDTSAFRVKYEPTNPAADANGNVKYPNVNPVIEMTDMRDAQRSYEANLNV 124

Query: 118 IKQSHDMMTTTLDLLR 133
           I  +  M+  TLD+L+
Sbjct: 125 ISATRRMIQRTLDILK 140


>gi|169831913|ref|YP_001717895.1| flagellar basal-body rod protein FlgC [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638757|gb|ACA60263.1| flagellar basal-body rod protein FlgC [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 139

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           L  S  I+ SG+  +  R+ +IS NIANA TT    G  PYRR+   F + +        
Sbjct: 3   LFKSFGISGSGMTAERLRLDLISNNIANAHTTRTREGG-PYRREVPVFAQYLERFRGRGF 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GVRV  +  D S      +P HP A+A+G V+YPNV++  E  D+   +R Y AN  
Sbjct: 62  AGAGVRVTAVVKDPSPLRAVHEPEHPDADAAGFVQYPNVDLNREFVDLMGASRAYEANAA 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+   L+L R
Sbjct: 122 AFDAAKQMVQRALELGR 138


>gi|330830305|ref|YP_004393257.1| flagellar basal-body rod protein FlgC [Aeromonas veronii B565]
 gi|328805441|gb|AEB50640.1| Flagellar basal-body rod protein FlgC [Aeromonas veronii B565]
          Length = 139

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           L     IA S ++ QS R+  ++ N+ANA +   +   + Y  +   F   +        
Sbjct: 3   LFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSV-ENTYHARRPVFAAQLDQAMSDKQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           GS GV VK I   ++  ++E++P HP+A+  G +  PNVN++ E ADM   +R Y  N+Q
Sbjct: 62  GSVGVEVKGIVESKAPLLKEYNPNHPMADKDGFIFKPNVNMVEEMADMINASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+  TL L +
Sbjct: 122 VADSAKKMLQQTLQLGK 138


>gi|258592507|emb|CBE68816.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
           [NC10 bacterium 'Dutch sediment']
          Length = 140

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS--------FEEVM 55
           + AS  I  + LA Q  RM +I+EN+ANA  T  TP   PYRRK +         FE ++
Sbjct: 1   MFASMEINATALAAQRVRMNLIAENLANAEVTR-TPIGGPYRRKGVVLGTRGTSAFEGLL 59

Query: 56  HGS---GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
           +     GGV V KI   Q+     ++P HP A+ +G V  PN+N ++E  D+   +R Y 
Sbjct: 60  NAGAAPGGVEVLKIVESQAPPNLVYNPSHPDADTAGYVAMPNINPVMEMVDLMSASRAYE 119

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN+  I+ +  MMT TL++ R
Sbjct: 120 ANISAIQIAKSMMTKTLEIGR 140


>gi|24374760|ref|NP_718803.1| flagellar basal body rod protein FlgC [Shewanella oneidensis MR-1]
 gi|24349426|gb|AAN56247.1|AE015762_4 flagellar basal-body rod protein FlgC [Shewanella oneidensis MR-1]
          Length = 138

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L     +A SG++ QS R+   + NIANA +   +     YR +   FE  M        
Sbjct: 3   LFNIFDVAGSGMSAQSLRLNTTASNIANADSVSSSID-KTYRSRHPIFEAEMAKAQSQQQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV VK I       ++E+ P HP+A+  G +  PNVNV+ E ADM   +R Y  N+Q
Sbjct: 62  ASQGVAVKGIVESDKPLLKEYSPDHPMADGDGFIYKPNVNVMEEMADMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  M+  TL + +
Sbjct: 122 VAEAAKSMLQQTLGMGK 138


>gi|126175148|ref|YP_001051297.1| flagellar basal body rod protein FlgC [Shewanella baltica OS155]
 gi|125998353|gb|ABN62428.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
          Length = 138

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L +   +A SG++ QS R+   + NIANA +   +     YR +   FE  M        
Sbjct: 3   LFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVD-KTYRARHPIFEAEMAKAQSQQQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q
Sbjct: 62  ASQGVAVKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  M+  TL + +
Sbjct: 122 VAEAAKSMLQQTLGMGK 138


>gi|225375315|ref|ZP_03752536.1| hypothetical protein ROSEINA2194_00940 [Roseburia inulinivorans DSM
           16841]
 gi|225212804|gb|EEG95158.1| hypothetical protein ROSEINA2194_00940 [Roseburia inulinivorans DSM
           16841]
          Length = 146

 Score =  176 bits (447), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L  +  I+ SG+  +  RM  I+ENIAN  TT  T    PYRRK ++F E    S     
Sbjct: 3   LFQAFDISASGMTAERFRMDTIAENIANVNTTR-TEDGTPYRRKIVTFAEKEVTSFSRYY 61

Query: 59  ---------GGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GV+V  +  D ++ F+ E+DP +P A+ +G V YPNVN + E  ++ + +
Sbjct: 62  QNARSKFVGNGVKVSSVKEDTETDFIMEYDPSNPDADENGYVSYPNVNTVTEMTNLIDAS 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN    + +  +  + L + +
Sbjct: 122 RAYEANTTAFEAAKSIAQSGLSIGK 146


>gi|332525068|ref|ZP_08401248.1| flagellar basal-body rod protein FlgC [Rubrivivax benzoatilyticus
           JA2]
 gi|332108357|gb|EGJ09581.1| flagellar basal-body rod protein FlgC [Rubrivivax benzoatilyticus
           JA2]
          Length = 139

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +     ++ S ++ QS R+ +++ N+ANA T    P    Y+ + + F+  +  +G    
Sbjct: 3   MFRIFDVSGSAVSAQSQRLNVVASNLANADTVAG-PDGQAYKARQVVFQTALMDAGADPA 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GVRV  I  D S      DP HP A+A G V + NVN + E  DM   +R Y  N++
Sbjct: 62  SAAGVRVSTIREDASPGRRVHDPKHPAADAEGYVTFSNVNAVQEMVDMISASRSYQNNVE 121

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  ++  TL + +
Sbjct: 122 VMNTAKTLLQKTLQMGQ 138


>gi|154253013|ref|YP_001413837.1| flagellar basal body rod protein FlgC [Parvibaculum lavamentivorans
           DS-1]
 gi|154156963|gb|ABS64180.1| flagellar basal-body rod protein FlgC [Parvibaculum lavamentivorans
           DS-1]
          Length = 139

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/136 (47%), Positives = 90/136 (66%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           MD LI S  +A SGL  QS RM++I+ENIANA +T    G DPYRRK ++FE+ ++   G
Sbjct: 4   MD-LIKSMMVAASGLKAQSGRMRVIAENIANADSTSRVAGGDPYRRKIVTFEDKLNREIG 62

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V + +  +D++ F  ++ PGHP A+ +G VK PNVN +VE  DMRE  R Y ANL  
Sbjct: 63  ANTVSLGRPVLDKTEFQLKYMPGHPAADEAGYVKMPNVNGMVEAMDMREAQRSYEANLNL 122

Query: 118 IKQSHDMMTTTLDLLR 133
           I+ S  M++ T+D+LR
Sbjct: 123 IQASRRMISQTIDILR 138


>gi|77165840|ref|YP_344365.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani ATCC
           19707]
 gi|254433209|ref|ZP_05046717.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani AFC27]
 gi|76884154|gb|ABA58835.1| Flagellar basal-body rod protein FlgC [Nitrosococcus oceani ATCC
           19707]
 gi|207089542|gb|EDZ66813.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani AFC27]
          Length = 137

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 7/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------G 57
           L     IA + ++ Q+ R+   + N+ANA +   +     YR +   F  ++        
Sbjct: 3   LFKVFDIAGTAMSAQTLRLNTTASNLANADSVSSSID-QTYRARQPVFATLLDKFNPEAP 61

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +GGV+V  +    +   +E+ P HP+AN +G + +PNVN + E A+M   +R Y  N++ 
Sbjct: 62  AGGVQVLGVVESGAPLQQEYAPDHPMANEAGYIFHPNVNSIEEMANMISASRNYENNVEM 121

Query: 118 IKQSHDMMTTTLDLL 132
              S  ++  TL L 
Sbjct: 122 ANTSKQLLLRTLQLG 136


>gi|188581884|ref|YP_001925329.1| flagellar basal body rod protein FlgC [Methylobacterium populi
           BJ001]
 gi|179345382|gb|ACB80794.1| flagellar basal-body rod protein FlgC [Methylobacterium populi
           BJ001]
          Length = 136

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/136 (44%), Positives = 83/136 (61%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           MD+L  S  IA SGL  QS RM+II+ENIANA +   TPG DPYRRK  +F         
Sbjct: 1   MDFL-KSLGIAASGLKAQSGRMRIIAENIANADSAAQTPGGDPYRRKIPTFTNRFDRELN 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V   ++  D + F  ++DPG+P A+A G V+ PNVN L+E  DMRE  R Y ANL  
Sbjct: 60  ASVVEAGRVRRDPTPFRTKYDPGNPAADARGEVRLPNVNGLIENMDMREAQRSYEANLNM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  M++ TL++L+
Sbjct: 120 VTATRRMISRTLEILK 135


>gi|220934392|ref|YP_002513291.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995702|gb|ACL72304.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 139

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L     ++ S L+ QS R+  I+ N+ANA+    TP    YR K   F  V+  +G 
Sbjct: 1   MSNLFKIFDVSGSALSAQSVRLNAIASNMANAQVASQTPEG-AYRAKHPVFASVLQAAGQ 59

Query: 61  ------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                 VRV  +   Q+  V E+ P HP+AN  G +  PNV+V+ E A+M   +R Y  N
Sbjct: 60  SGSATPVRVVNVLESQAEPVAEYAPNHPLANEQGYIFKPNVSVVEEMANMISASRSYQNN 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ +  +  ++  TL L +
Sbjct: 120 VEVMNTTKQLLLRTLQLGQ 138


>gi|126668556|ref|ZP_01739510.1| flagellar basal-body rod protein C [Marinobacter sp. ELB17]
 gi|126626961|gb|EAZ97604.1| flagellar basal-body rod protein C [Marinobacter sp. ELB17]
          Length = 147

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 16/146 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           L     IA SG+  QS R+   + NIANA T   + G + YR +   F  V         
Sbjct: 3   LGNIFDIAGSGMTAQSLRLNTTASNIANAETASSSTG-ETYRARKPVFAAVQQSLLNGNQ 61

Query: 57  --------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                   G  GVRV+ I    +     ++P HP A+  G V YPNVNV  E ADM  ++
Sbjct: 62  PAFGSGAEGGAGVRVEGIVESDADLQMRYEPNHPAASEDGYVYYPNVNVAEEMADMMSSS 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLRD 134
           R +  N+  +  +  MM   L L ++
Sbjct: 122 RSFQMNVDIMNTAKSMMQRILTLGQN 147


>gi|187778746|ref|ZP_02995219.1| hypothetical protein CLOSPO_02341 [Clostridium sporogenes ATCC
           15579]
 gi|187772371|gb|EDU36173.1| hypothetical protein CLOSPO_02341 [Clostridium sporogenes ATCC
           15579]
          Length = 153

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 13/141 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
             +  I+ SGL+ +  RM  I+ NIANA TT    G  PY+RK   FEE ++        
Sbjct: 14  FDTMRISASGLSAERLRMDTIASNIANATTTRTENGG-PYKRKIAVFEENLNNELNKKNG 72

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+   I  D S   + +DP HP A+A G V  PNVNVL E ADM  + R Y 
Sbjct: 73  TNEKKLYGVKATGIVEDSSPVRKMYDPSHPDADAEGYVSMPNVNVLNEMADMMASVRTYE 132

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           A++  +     M    L++ +
Sbjct: 133 ASVTVMNAEKSMFGKALEIGK 153


>gi|39936948|ref|NP_949224.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           CGA009]
 gi|192292776|ref|YP_001993381.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           TIE-1]
 gi|39650805|emb|CAE29328.1| flagellar basal-body rod protein flgC [Rhodopseudomonas palustris
           CGA009]
 gi|192286525|gb|ACF02906.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           TIE-1]
          Length = 141

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/133 (44%), Positives = 81/133 (60%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
              S  IA SGL  Q+ RM++ISEN+ANA +T   PG DPYRRK  +F   +  +   RV
Sbjct: 8   FARSMGIATSGLRAQAGRMRVISENVANADSTAQNPGGDPYRRKVPTFTSALDRTLDARV 67

Query: 64  KKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +G    D S F  +++P +P A+A+G VKYPNVN ++E  DMR+  R Y ANL  I  
Sbjct: 68  VALGRVKPDTSAFRVKYEPTNPAADANGNVKYPNVNPVIEMTDMRDAQRSYEANLNVISA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|117919770|ref|YP_868962.1| flagellar basal body rod protein FlgC [Shewanella sp. ANA-3]
 gi|117612102|gb|ABK47556.1| flagellar basal-body rod protein FlgC [Shewanella sp. ANA-3]
          Length = 138

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L     +A SG++ QS R+   + NIANA +   +     YR +   FE  M        
Sbjct: 3   LFNIFDVAGSGMSAQSLRLNTTASNIANADSVSSSVD-KTYRSRHPIFEAEMAKAQSQQQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q
Sbjct: 62  ASQGVTVKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  M+  TL + +
Sbjct: 122 VAEAAKSMLQQTLGMGK 138


>gi|207728344|ref|YP_002256738.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           MolK2]
 gi|207739739|ref|YP_002258132.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           IPO1609]
 gi|206591590|emb|CAQ57202.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           MolK2]
 gi|206593121|emb|CAQ60027.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           IPO1609]
          Length = 168

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 5/134 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---G 60
           L     +A S L  QS RM +++ N+ANA +    P    YR K + F       G   G
Sbjct: 36  LFKVMDVAGSALTAQSKRMNVVASNLANAESV-TGPDGTAYRAKQVVFSPEQGTDGYATG 94

Query: 61  VRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           V V  +  D  +       PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++   
Sbjct: 95  VSVDGVVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVAN 154

Query: 120 QSHDMMTTTLDLLR 133
            +  M    L L +
Sbjct: 155 TTKTMAAKALTLGQ 168


>gi|300114801|ref|YP_003761376.1| flagellar basal-body rod protein FlgC [Nitrosococcus watsonii
           C-113]
 gi|299540738|gb|ADJ29055.1| flagellar basal-body rod protein FlgC [Nitrosococcus watsonii
           C-113]
          Length = 137

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------G 57
           L     IA + ++ Q+ R+   + N+ANA +   +     YR +   F  ++        
Sbjct: 3   LFKVFDIAGTAMSAQTLRLNTTASNLANADSVSSSI-HQTYRARQPVFATLLDELNPAAP 61

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +GGV+V  +    +   +E+ P HP+AN +G + +PNVN + E A+M   +R Y  N++ 
Sbjct: 62  AGGVQVLGVVESGAPLQQEYAPDHPMANEAGYIFHPNVNSIEEMANMISASRSYQNNVEM 121

Query: 118 IKQSHDMMTTTLDLLR 133
              S  ++  TL L +
Sbjct: 122 ANTSKQLLLRTLQLGQ 137


>gi|168183267|ref|ZP_02617931.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Bf]
 gi|170756841|ref|YP_001782281.1| flagellar basal body rod protein FlgC [Clostridium botulinum B1
           str. Okra]
 gi|226950077|ref|YP_002805168.1| flagellar basal body rod protein FlgC [Clostridium botulinum A2
           str. Kyoto]
 gi|237796104|ref|YP_002863656.1| flagellar basal body rod protein FlgC [Clostridium botulinum Ba4
           str. 657]
 gi|169122053|gb|ACA45889.1| flagellar basal-body rod protein FlgC [Clostridium botulinum B1
           str. Okra]
 gi|182673715|gb|EDT85676.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Bf]
 gi|226841648|gb|ACO84314.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A2
           str. Kyoto]
 gi|229263476|gb|ACQ54509.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Ba4
           str. 657]
          Length = 144

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 49/141 (34%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
             +  I+ SGL+ +  RM  I+ NI+NA TT    G  PY+RK   FEE ++        
Sbjct: 5   FDTMRISASGLSAERLRMDTIASNISNATTTRTENGG-PYKRKIAVFEENLNNELNKKNG 63

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+   I  D S   + +DP HP A+  G V  PNVNVL E ADM  + R Y 
Sbjct: 64  ATEKKLYGVKATGIVEDSSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRTYE 123

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN+  +     M    L++ +
Sbjct: 124 ANVTVMNAEKSMFGKALEIGK 144


>gi|153953776|ref|YP_001394541.1| flagellar basal body rod protein FlgC [Clostridium kluyveri DSM
           555]
 gi|219854392|ref|YP_002471514.1| hypothetical protein CKR_1049 [Clostridium kluyveri NBRC 12016]
 gi|146346657|gb|EDK33193.1| FlgC [Clostridium kluyveri DSM 555]
 gi|219568116|dbj|BAH06100.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 143

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/144 (35%), Positives = 68/144 (47%), Gaps = 12/144 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M     +  I+ SGL+ +  RM  I+ N+AN  TT      +PYRRK   F+E +     
Sbjct: 1   MIQAFNTLRISASGLSAERLRMDTIASNMANVETTKGA-DGNPYRRKIAVFQENLQKQLN 59

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                   S GV+   I  D S F   +DP +  A+A G V  PNVN+L E ADM    R
Sbjct: 60  KAGRYENVSQGVKAVGIVEDNSEFKRVYDPTNADADADGYVSMPNVNILNEMADMMVAVR 119

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y ANL  I     M +  LD+ +
Sbjct: 120 SYEANLSAISAEKSMFSKALDIGK 143


>gi|113969604|ref|YP_733397.1| flagellar basal body rod protein FlgC [Shewanella sp. MR-4]
 gi|114046836|ref|YP_737386.1| flagellar basal body rod protein FlgC [Shewanella sp. MR-7]
 gi|113884288|gb|ABI38340.1| flagellar basal-body rod protein FlgC [Shewanella sp. MR-4]
 gi|113888278|gb|ABI42329.1| flagellar basal-body rod protein FlgC [Shewanella sp. MR-7]
          Length = 138

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L +   +A SG++ QS R+   + NIANA +   +     YR +   FE  M        
Sbjct: 3   LFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSID-KTYRSRHPIFEAEMAKAQSQQQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q
Sbjct: 62  ASQGVAVKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  M+  TL + +
Sbjct: 122 VAEAAKSMLQQTLGMGK 138


>gi|291617018|ref|YP_003519760.1| FlgC [Pantoea ananatis LMG 20103]
 gi|291152048|gb|ADD76632.1| FlgC [Pantoea ananatis LMG 20103]
 gi|327393469|dbj|BAK10891.1| flagellar basal-body rod protein FlgC [Pantoea ananatis AJ13355]
          Length = 134

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---VMHGSGG 60
           L+    IA S +  QS R+ + + N+ANA +    P   PY  K + F+        +GG
Sbjct: 3   LLNIFDIAGSAMTAQSQRLNVSASNLANADSV-TGPDGQPYVAKQVVFQTDAAAGAATGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++  D +     +DPG+P+A+A G VK PNV+V+ ET +    +R Y AN++ +  
Sbjct: 62  VKVAQVVDDPTPAKLVYDPGNPMADAKGYVKMPNVDVVAETVNTMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL + +
Sbjct: 122 VKSMMMKTLTMGQ 134


>gi|149195179|ref|ZP_01872270.1| flagellar basal-body rod protein C [Caminibacter mediatlanticus
           TB-2]
 gi|149134731|gb|EDM23216.1| flagellar basal-body rod protein C [Caminibacter mediatlanticus
           TB-2]
          Length = 165

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 34/163 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
            + S  I+  GL+ Q  R+ IISENIANA TT  TP   PYRRK + F+ +         
Sbjct: 3   FLNSFDISGYGLSAQRFRINIISENIANANTTR-TPEGGPYRRKEVIFKAIPFEDILNKE 61

Query: 56  -------------------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
                                         V V KI  D S  + +++P +P ANA G V
Sbjct: 62  IENSANFHKYENPLDEEGEDYKVAKPPIETVIVDKIVRDDSKPILKYEPDNPDANADGYV 121

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            YPN+N ++E AD+ E  R Y AN+   + + +M  + +++L+
Sbjct: 122 AYPNINPVIEMADLIEATRSYQANVAAFQSAKNMAQSAINILQ 164


>gi|73539448|ref|YP_299815.1| flagellar basal-body rod protein FlgC [Ralstonia eutropha JMP134]
 gi|72122785|gb|AAZ64971.1| Flagellar basal-body rod protein FlgC [Ralstonia eutropha JMP134]
          Length = 135

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 5/135 (3%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---- 58
             +    +A S +A QS RM + + N+ANA +    P    YR K + F           
Sbjct: 2   PAMNIFDVAGSAMAAQSQRMNVTASNLANADSVVS-PDGQAYRTKQVIFGMAPTPGQSDV 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGV+V+ +  D S      +P HP+ANA G V  PNVN + E  +M   +R Y AN++ +
Sbjct: 61  GGVQVQGVMEDPSPPRMVHNPTHPMANAEGYVVMPNVNPVEEMVNMISASRSYQANVEVL 120

Query: 119 KQSHDMMTTTLDLLR 133
             + +MM  TL + +
Sbjct: 121 NSAKNMMLKTLTIGQ 135


>gi|114330359|ref|YP_746581.1| flagellar basal-body rod protein FlgC [Nitrosomonas eutropha C91]
 gi|114307373|gb|ABI58616.1| flagellar basal-body rod protein FlgC [Nitrosomonas eutropha C91]
          Length = 134

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           L +  ++A S +A QS R+ +++ N+ANA +   + G + YR + + F  V      + G
Sbjct: 3   LFSVFNVAGSAMAAQSQRLNVVASNLANADSATSSTG-EAYRSRQVVFRTVDISADKAKG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  I  D S     +DP HP+A+  G V  PNVNV+ E  +M   +R Y  ++  +  
Sbjct: 62  VKVAGIVHDPSPMRVVYDPKHPMADEKGYVTLPNVNVVDEMVNMMSASRSYQNSVDMMNV 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 TKTLLQKTLSIGQ 134


>gi|260222465|emb|CBA32056.1| Flagellar basal-body rod protein flgC [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 134

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           + +  +++ S ++ QS R+ +++ N+ANA      P    Y+ + + FE V  GS    G
Sbjct: 3   MFSIFNVSGSAVSAQSQRLNVVASNLANADAVAG-PDGQGYKSRQVVFETVPMGSEASSG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  I        +  +P HP A+A G V   NVN + E  +M   +R Y  N++ +  
Sbjct: 62  VKVSSIKESNEPLRKVHNPLHPSADADGYVTQSNVNPVEEMVNMISASRSYQNNVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 AKSLLLKTLQMGQ 134


>gi|291059787|gb|ADD72522.1| flagellar basal-body rod protein FlgC [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 152

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 19/152 (12%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI----------- 49
           M  L +  +IA +G++ Q  R  +IS+NIANA +T    G    R + +           
Sbjct: 1   MMGLFSGINIAATGMSAQRLRADVISDNIANASSTRTQEGGVFRRSRVVLAQKNPGIDWR 60

Query: 50  ---SFEEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                E++  G G GVRV  I  D +     +DP HP A      +G V+YPNV+++ E 
Sbjct: 61  IPFVPEQLDRGVGTGVRVVSIEKDNAPSRLVYDPTHPDAILSGPKAGYVEYPNVDIVTEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D+   +R Y AN+  I  S +M    L++ R
Sbjct: 121 VDLISASRAYEANISVISGSKEMFQRALEIAR 152


>gi|256830790|ref|YP_003159518.1| flagellar basal-body rod protein FlgC [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579966|gb|ACU91102.1| flagellar basal-body rod protein FlgC [Desulfomicrobium baculatum
           DSM 4028]
          Length = 145

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           MD++  +  +  S L  +   + +IS N+ANA+TT    G  PYRRK + F         
Sbjct: 1   MDFM-TAIDVGASALKAERTHLNVISMNLANAKTTRTVDGG-PYRRKEVVFKETEVQSPF 58

Query: 52  -----EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                  +     GVRV+ +  D+    + ++PGHP A+  G V YP++NV+ E  +M  
Sbjct: 59  SKAMNSALDQDVKGVRVESVQNDRRPLKQVYEPGHPDADEEGYVSYPDINVVEEMTNMLS 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+ TI  S  M +  L++ R
Sbjct: 119 AMRAYEANVSTITTSKSMFSKALEIGR 145


>gi|312879581|ref|ZP_07739381.1| flagellar basal-body rod protein FlgC [Aminomonas paucivorans DSM
           12260]
 gi|310782872|gb|EFQ23270.1| flagellar basal-body rod protein FlgC [Aminomonas paucivorans DSM
           12260]
          Length = 139

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 8/136 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HG 57
             +  +A S L      M  +S N+AN  TT  TP   PY RK   F+E +         
Sbjct: 4   FRNIDVAGSALTAHRLWMDTVSSNLANVNTTR-TPSGGPYVRKVPIFQEKLMEAMKGAPS 62

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           S GVRV +I  D       + P HP ANA G V YPNVNV+ E ADM   +R Y A++  
Sbjct: 63  SSGVRVAEIAKDPLPPRMVYQPDHPDANAEGYVAYPNVNVVREMADMLVASRAYEASVNV 122

Query: 118 IKQSHDMMTTTLDLLR 133
           ++    + T+ L+++R
Sbjct: 123 VETGKALWTSALEIMR 138


>gi|163781740|ref|ZP_02176740.1| flagellar biosynthesis FlgC [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882960|gb|EDP76464.1| flagellar biosynthesis FlgC [Hydrogenivirga sp. 128-5-R1-1]
          Length = 137

 Score =  175 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 8/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
           M+ L  +  I+ SG+  Q  RM  ++ N+AN      T   +P+R+  + F+ + +    
Sbjct: 1   MNDLFRTFEISASGMYAQRLRMNTVASNLANYEAYKQT--GEPFRKLEVVFQAIYNPERV 58

Query: 57  --GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
             G   V V +I    + F   +DP +P A+A G V+ PNV+++ E ADM    R Y AN
Sbjct: 59  KKGEIPVAVTQIRESDAPFKVIYDPDNPRADARGYVRLPNVDLVKEMADMISAVRSYEAN 118

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L     + DM   T++L R
Sbjct: 119 LNAFNLTKDMANRTIELWR 137


>gi|302670716|ref|YP_003830676.1| flagellar basal-body rod protein FlgC [Butyrivibrio proteoclasticus
           B316]
 gi|302395189|gb|ADL34094.1| flagellar basal-body rod protein FlgC [Butyrivibrio proteoclasticus
           B316]
          Length = 149

 Score =  175 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 73/146 (50%), Gaps = 16/146 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
           +  S +I +SG+  Q  RM IISENIANA TT    G  PY RK + F E          
Sbjct: 3   IFDSFNINSSGMTAQRFRMDIISENIANANTTRTKDGDTPYTRKVVRFAEKGTQTPFSRI 62

Query: 56  -------HGSGGVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GV+V ++  D  + +   +DP HP A+A+G V YPNVN + E  ++ + 
Sbjct: 63  LNERLDHYSGRGVKVTQVQDDTWTQYNIVYDPSHPDADANGYVTYPNVNTVTEMTNLIDA 122

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN      S ++    L+L +
Sbjct: 123 SRSYEANATAFDASKNIAARGLELGQ 148


>gi|118474843|ref|YP_891880.1| flagellar basal body rod protein FlgC [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414069|gb|ABK82489.1| flagellar basal-body rod protein FlgC [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 164

 Score =  175 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F+ +      
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKAIEFDKEL 58

Query: 56  ---------------------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V KI  D   F  ++DP HP A+A G
Sbjct: 59  NKSINSKNDFLKNENPLNDPDAPEFPKPALMSVVVDKIVRDDKDFKLKYDPTHPDADAKG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  PN+N ++E AD+ E  R Y AN+   + +  + T+ ++LL+
Sbjct: 119 YIMLPNINPVIEMADLIEATRAYQANVSAFQSAKSIATSAIELLK 163


>gi|134300249|ref|YP_001113745.1| flagellar basal-body rod protein FlgC [Desulfotomaculum reducens
           MI-1]
 gi|134052949|gb|ABO50920.1| flagellar basal-body rod protein FlgC [Desulfotomaculum reducens
           MI-1]
          Length = 145

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 12/142 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD--TPGSDPYRRKTISFEEVMHGS--- 58
           L  S  I+ SG+  +  R+ +IS NIAN  T      P S  YRR+   F E +  +   
Sbjct: 3   LFDSFGISASGMTSERLRLDLISNNIANMNTPSRPNDPNSPVYRRRVPIFAEQLRQTIST 62

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GVRVK I  D +      DP HP+A+  G V YPN+N++ E  DM   +R Y
Sbjct: 63  KGVEPKGAGVRVKAITEDPAPPRIVNDPSHPLADDKGNVAYPNINIVNEMVDMITASRTY 122

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  +  +  M    L++ R
Sbjct: 123 EANVTALNAAKSMALKALEISR 144


>gi|58039961|ref|YP_191925.1| flagellar basal body rod protein FlgC [Gluconobacter oxydans 621H]
 gi|58002375|gb|AAW61269.1| Flagellar basal-body rod protein FlgC [Gluconobacter oxydans 621H]
          Length = 135

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 59/133 (44%), Positives = 83/133 (62%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGG 60
           L  +  I+ SG+  Q+ R++I++EN+AN  TTG  PG+DPYRRKTI+F E +    G+  
Sbjct: 3   LSTTIGISASGMDAQAQRLRIVAENLANQDTTGSQPGADPYRRKTITFAEHVDDETGAST 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V+ +G D S F   +DP HP A+  G VK  NV+ + E  DMRE  R Y ANL  +  
Sbjct: 63  VDVQNVGQDMSDFDTRYDPSHPAADERGYVKVSNVDSMTEMMDMREAERSYEANLNALSS 122

Query: 121 SHDMMTTTLDLLR 133
           +  M++ TLDLL+
Sbjct: 123 TRTMLSRTLDLLK 135


>gi|121607563|ref|YP_995370.1| flagellar basal-body rod protein FlgC [Verminephrobacter eiseniae
           EF01-2]
 gi|121552203|gb|ABM56352.1| flagellar basal-body rod protein FlgC [Verminephrobacter eiseniae
           EF01-2]
          Length = 134

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           +++  +++ S ++ Q+ R+ +++ N+AN       P   PY+ + + F+    G+    G
Sbjct: 3   MLSIFNLSGSAISAQAQRLNVVASNLANVDAVAG-PDGQPYKARQVVFQTAPMGAPSAAG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  I   Q       DPGHP+A+A G V + NVN + E  DM    R Y  N++ +  
Sbjct: 62  VRVIAISESQVPGRRVHDPGHPLADAQGYVTHSNVNAVQEMVDMISAARSYQNNVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL L +
Sbjct: 122 AKSLLLKTLQLGQ 134


>gi|75675326|ref|YP_317747.1| flagellar basal body rod protein FlgC [Nitrobacter winogradskyi
           Nb-255]
 gi|74420196|gb|ABA04395.1| Flagellar basal-body rod protein FlgC [Nitrobacter winogradskyi
           Nb-255]
          Length = 141

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/133 (47%), Positives = 82/133 (61%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
            + S  IA SGL  Q+ RM++ISENIANA +T   PG DPYRRK  +F   +  +   +V
Sbjct: 8   FMRSMSIATSGLRAQAGRMRVISENIANANSTAQAPGGDPYRRKVPTFSSALDRALDAKV 67

Query: 64  KKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +G    D STF  + +PG+P A+ SG VKYPNVN LVE  DMR+  R Y ANL  I  
Sbjct: 68  VTLGRVRPDTSTFRIKHEPGNPAADTSGNVKYPNVNPLVEMTDMRDAQRSYEANLNIISA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|153001474|ref|YP_001367155.1| flagellar basal body rod protein FlgC [Shewanella baltica OS185]
 gi|160876205|ref|YP_001555521.1| flagellar basal body rod protein FlgC [Shewanella baltica OS195]
 gi|151366092|gb|ABS09092.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS185]
 gi|160861727|gb|ABX50261.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS195]
 gi|315268395|gb|ADT95248.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS678]
          Length = 138

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L +   +A SG++ QS R+   + NIANA +   +     YR +   FE  M        
Sbjct: 3   LFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVD-KTYRSRHPIFEAEMAKAQSQQQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q
Sbjct: 62  ASQGVAVKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  M+  TL + +
Sbjct: 122 VAEAAKSMLQQTLGMGK 138


>gi|226313072|ref|YP_002772966.1| flagellar basal-body rod protein FlgC [Brevibacillus brevis NBRC
           100599]
 gi|226096020|dbj|BAH44462.1| flagellar basal-body rod protein FlgC [Brevibacillus brevis NBRC
           100599]
          Length = 152

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 44/149 (29%), Positives = 60/149 (40%), Gaps = 21/149 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTISFE-------- 52
           L    + + S L     R+  IS NIANA  T          PYRRK +           
Sbjct: 3   LFQGINTSASALTANRLRLDTISSNIANAEVTRANFVDGAWQPYRRKMVELSPQTNGTFD 62

Query: 53  ----------EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                         G  GV+V  I  D + F   +DP HP A+  G +  PNV+ + E  
Sbjct: 63  NFLQAAVGTVSGSQGGQGVKVTAIQEDNTPFKRVYDPSHPDADQDGYLLMPNVDPMKEMV 122

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           DM   +R Y AN+  +  S  MM   L++
Sbjct: 123 DMISASRSYEANVTALNASKAMMLKALEI 151


>gi|115523571|ref|YP_780482.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
 gi|115517518|gb|ABJ05502.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
          Length = 141

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/136 (45%), Positives = 85/136 (62%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   S  IA SGL  Q+ RM++I+ENIANA++T  T G DPYRRK  +F   +  +  
Sbjct: 6   MDF-SRSMAIATSGLRAQAGRMRVIAENIANAQSTAQTAGGDPYRRKVPTFTTALDRALD 64

Query: 61  VRVKKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            RV  +G    D S F  +++P +P A+A+G VKYPNVN L+E  DMR+  R Y ANL  
Sbjct: 65  ARVVALGRVKPDTSPFQIKYEPSNPAADAAGNVKYPNVNPLIEMTDMRDAQRSYEANLNI 124

Query: 118 IKQSHDMMTTTLDLLR 133
           I  +  M+  TLD+L+
Sbjct: 125 ISATRRMVQRTLDILK 140


>gi|78485814|ref|YP_391739.1| flagellar basal-body rod protein FlgC [Thiomicrospira crunogena
           XCL-2]
 gi|78364100|gb|ABB42065.1| Flagellar basal-body rod protein FlgC [Thiomicrospira crunogena
           XCL-2]
          Length = 136

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 6/135 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-----S 58
           +  +  I+ +G+  Q+ R+  I+ N+AN  +       + YR K   F+ +M       +
Sbjct: 3   MFPTLDISATGMHAQTVRLNTIASNMANVDSISSNSD-ETYRSKQPVFKTIMDNETGRPA 61

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGV V  I   ++    E++P HP+ANA G +  PNVNV+ E A+M   +R Y  N++ +
Sbjct: 62  GGVMVDDIVESKAPLKMEYNPNHPMANAEGYIYRPNVNVVEEMANMMSASRSYETNIEVL 121

Query: 119 KQSHDMMTTTLDLLR 133
             S  ++  T+ + +
Sbjct: 122 NTSKQLLLRTIQMGK 136


>gi|311992325|gb|ADQ26736.1| proximal rod protein [Aeromonas hydrophila]
          Length = 138

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           L     IA S ++ QS R+  ++ N+ANA +   +     Y  +   F   +        
Sbjct: 2   LFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSV-EKTYHARRPIFAAQLDQAMSDKQ 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV VK I   ++  ++E++P HP+A+  G +  PNVN++ E ADM   +R Y  N+Q
Sbjct: 61  ASAGVEVKGIVESEAPLLKEYNPNHPMADKDGFIFKPNVNMVEEMADMINASRSYQTNVQ 120

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+  TL+L +
Sbjct: 121 VADSAKKMLQQTLNLGK 137


>gi|289208112|ref|YP_003460178.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp. K90mix]
 gi|288943743|gb|ADC71442.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp. K90mix]
          Length = 139

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
           M  L    + + S L  QS R+  ++ N+ANA T    P  + YR K + F+ VM+    
Sbjct: 1   MSDLFNLFNTSASALTAQSVRLNTVASNLANANTVATNPD-EAYRAKQVLFQTVMNQADP 59

Query: 57  --GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              S GVRV  I   Q+     ++P HP AN  G +  P ++V+ E A+M   +R Y AN
Sbjct: 60  NGASNGVRVAGIDESQAPPQPHYEPNHPQANEDGYIFRPAISVVEEMANMMSASRNYEAN 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ ++ S  ++  TL + +
Sbjct: 120 VEVMETSRQLLQRTLQIGQ 138


>gi|157376218|ref|YP_001474818.1| flagellar basal body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
 gi|157318592|gb|ABV37690.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
          Length = 138

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L    ++A SG++ QS R+   + NIANA     +   + YR +   FE  M        
Sbjct: 3   LFDIFNVAGSGMSAQSVRLNTTASNIANADAVSSSVD-ETYRARHPIFEAEMAKASHQQQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S  V VK I    +   +E+ P HP+A+  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  SSQAVAVKGIVESDAPLQKEYSPDHPMADGDGFIYKPNVNVMEEMANMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  M+  TL + +
Sbjct: 122 VAEAAKSMLQQTLRIGK 138


>gi|86750885|ref|YP_487381.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           HaA2]
 gi|86573913|gb|ABD08470.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           HaA2]
          Length = 141

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
              S  IA SGL  Q+ RM++ISENIANA +T   PG DPYRRK  +F   +  S   R 
Sbjct: 8   FARSMGIATSGLRAQAGRMRVISENIANADSTAQKPGGDPYRRKVPTFTSALDRSLDART 67

Query: 64  KKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +G    D S F  +++P +P A+A+G VKYPNVN ++E  DMR   R Y ANL  I  
Sbjct: 68  VALGRVKPDTSAFRLKYEPTNPAADAAGNVKYPNVNSMIEMTDMRSAQRSYEANLNVISA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|170725953|ref|YP_001759979.1| flagellar basal body rod protein FlgC [Shewanella woodyi ATCC
           51908]
 gi|169811300|gb|ACA85884.1| flagellar basal-body rod protein FlgC [Shewanella woodyi ATCC
           51908]
          Length = 139

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L    +++ SG++ QS R+   + NIANA +   +   + YR +   FE  M  +  
Sbjct: 1   MMSLFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSID-ETYRARHPIFEAEMAKASH 59

Query: 61  -------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                  V VK I    +   +E+ P HP+A+  G +  PNVNV+ E ADM   +R Y  
Sbjct: 60  QQQSSQSVAVKGIVESDAPLQKEYSPNHPMADTDGFIYKPNVNVMEEMADMISASRSYQM 119

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           N+Q  + +  M+  TL + +
Sbjct: 120 NVQVAEAAKSMLQQTLRIGK 139


>gi|28211332|ref|NP_782276.1| flagellar basal body rod protein FlgC [Clostridium tetani E88]
 gi|28203772|gb|AAO36213.1| flagellar basal-body rod protein flgC [Clostridium tetani E88]
          Length = 143

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 13/142 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +  +  I+ SGL+ +  R+  I+ NI N+R+T    G +PYRRK   F+E +        
Sbjct: 3   MFNNMRISASGLSAERLRIDTIASNIVNSRSTRGKNG-EPYRRKVAIFQENLTKEINKQT 61

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV+   I  D S F   ++P HP A+ +G V  PNVN L E AD+    R Y
Sbjct: 62  GKREEVLKGVKAIGIQEDMSEFRRVYEPSHPDADENGYVLMPNVNALNEVADLIAATRSY 121

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I  S  M    L++ R
Sbjct: 122 EANVDAINSSKSMFMKALEIGR 143


>gi|188579865|ref|YP_001923310.1| flagellar basal body rod protein FlgC [Methylobacterium populi
           BJ001]
 gi|179343363|gb|ACB78775.1| flagellar basal-body rod protein FlgC [Methylobacterium populi
           BJ001]
          Length = 138

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/136 (49%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L++++ +A++GL  QS RM+++SEN+ANA++TG +PG+DPY RKT++F   +  + G
Sbjct: 2   IDPLLSASRLASAGLEAQSLRMRVVSENLANAQSTGASPGADPYARKTVTFRAELDRAAG 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              VR+++IG D + F  E DP +P A+ +G VK PNVN+LVE ADMRE NR Y ANLQ 
Sbjct: 62  IASVRLREIGTDDAPFRTEHDPANPAADENGNVKLPNVNMLVEMADMREANRSYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  M+ + +DLL+
Sbjct: 122 IKQARAMVASVIDLLK 137


>gi|163750572|ref|ZP_02157810.1| flagellar basal-body rod protein FlgC [Shewanella benthica KT99]
 gi|161329727|gb|EDQ00716.1| flagellar basal-body rod protein FlgC [Shewanella benthica KT99]
          Length = 139

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L    ++A SG++ QS R+   + NIANA +   +     YR +   F   M        
Sbjct: 3   LFNIFNVAGSGMSAQSIRLNTTASNIANADSVSSSVD-KTYRARHPIFAAEMLKASYQQQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S  V VK I    +  ++E+ P HP+A+  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  SSPSVVVKGIVESDAPLLKEYSPNHPMADGDGFIYKPNVNVMEEMANMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  M+  TL + +
Sbjct: 122 VAEAAKSMLQQTLRIGK 138


>gi|84502401|ref|ZP_01000537.1| flagellar basal body rod protein [Oceanicola batsensis HTCC2597]
 gi|84389213|gb|EAQ02010.1| flagellar basal body rod protein [Oceanicola batsensis HTCC2597]
          Length = 136

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 57/136 (41%), Positives = 84/136 (61%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L +   I+ SG+  Q  R++++SEN+ANA +T  +PG DPYRRKTI+FEE++    G
Sbjct: 1   MDPLKSILTISASGMLAQGERLKVVSENVANASSTAMSPGEDPYRRKTITFEELLDSESG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    V  I  D S F   F+P HP A+  G +K  NV+ ++E A+MRE +R Y AN+  
Sbjct: 61  VSTVGVSSIDRDDSDFSLRFEPSHPAADEQGFIKVSNVSPIMEMANMREASRSYEANMNL 120

Query: 118 IKQSHDMMTTTLDLLR 133
            + +  M +  +DLL+
Sbjct: 121 FEAARRMRSQVIDLLK 136


>gi|124268256|ref|YP_001022260.1| flagellar basal body rod protein [Methylibium petroleiphilum PM1]
 gi|124261031|gb|ABM96025.1| flagellar basal body rod protein [Methylibium petroleiphilum PM1]
          Length = 138

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 70/137 (51%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           ++   +++ S ++ QS R+ +++ N+ANA T    P    Y+ + + F+ +         
Sbjct: 3   MLNIFNVSGSAVSAQSQRLNVVASNLANADTVAG-PDGKAYKARQVVFQTLPFQQPGEAG 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV+V ++  D +   +  DP HP A+A G V Y NVN + E  +M   +R Y  N++
Sbjct: 62  TAAGVQVSQVTEDNAPGRKVLDPKHPQADADGYVTYSNVNAVEEMVNMISASRSYQNNIE 121

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  ++  TL + +
Sbjct: 122 VMNTAKTLLLKTLQMGQ 138


>gi|302338075|ref|YP_003803281.1| flagellar basal-body rod protein FlgC [Spirochaeta smaragdinae DSM
           11293]
 gi|301635260|gb|ADK80687.1| flagellar basal-body rod protein FlgC [Spirochaeta smaragdinae DSM
           11293]
          Length = 152

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 22/151 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           L +S ++A +G++ Q  R+ ++S+NIANA +T  TP   P+RR  + F            
Sbjct: 3   LFSSINVAATGMSAQRLRLDVVSDNIANA-STARTPEGGPFRRSRVIFRARNSQPYWRSP 61

Query: 54  -----VMHGSG-GVRVKKIGVD-QSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                + +G G GVRV  +  D  +     +DP HP A       G V+ PNVN++ E  
Sbjct: 62  FLPTALDNGVGRGVRVASVQKDMDAKPKLVYDPTHPDAIQTGPKKGYVEMPNVNIVEEMV 121

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           DM   +R Y AN+  +  S  M    L++ R
Sbjct: 122 DMMSASRSYEANVAVVNGSKAMFMRALEIGR 152


>gi|217972596|ref|YP_002357347.1| flagellar basal body rod protein FlgC [Shewanella baltica OS223]
 gi|304409980|ref|ZP_07391599.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|307302307|ref|ZP_07582065.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
 gi|217497731|gb|ACK45924.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS223]
 gi|304351389|gb|EFM15788.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|306914345|gb|EFN44766.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
          Length = 138

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L +   +A SG++ QS R+   + NIANA +   +     YR +   FE  M        
Sbjct: 3   LFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVD-KTYRSRHPIFEAEMAKAQSQQQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q
Sbjct: 62  ASQGVAVKGIVESDRPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  M+  TL + +
Sbjct: 122 VAEAAKSMLQQTLGMGK 138


>gi|160896081|ref|YP_001561663.1| flagellar basal-body rod protein FlgC [Delftia acidovorans SPH-1]
 gi|160361665|gb|ABX33278.1| flagellar basal-body rod protein FlgC [Delftia acidovorans SPH-1]
          Length = 134

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           + +   I+ S ++ QS R+ +++ N+AN       P    Y+ + + F+ V     GS G
Sbjct: 3   MFSIFSISGSAVSAQSQRLNVVASNLANVDAVAG-PDGKAYQARQVVFQTVAMGEEGSSG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  I  D +      DP HP+A+A G V + NV+ + E  +M   +R Y  N++ +  
Sbjct: 62  VRVSAISQDNTPGRRIHDPQHPLADAEGYVTHSNVSAVDEMVNMISASRSYQNNVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 TKSLLLKTLQMGQ 134


>gi|257457889|ref|ZP_05623048.1| flagellar basal-body rod protein FlgC [Treponema vincentii ATCC
           35580]
 gi|257444602|gb|EEV19686.1| flagellar basal-body rod protein FlgC [Treponema vincentii ATCC
           35580]
          Length = 151

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           + +S +IA +G++ +  R  +IS+NIANA TT    G   +RR  +   +   G      
Sbjct: 3   IFSSINIAATGMSAERLRTDVISDNIANASTTSSQEGG-YFRRSRVILAQKNDGIDWRLP 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                       GVRV  I  D S     ++P HP A      +G V+YPNVN++ E  D
Sbjct: 62  FVPSDMDRGVGTGVRVTGIEKDNSEPRLSYEPDHPHAIVSGPKAGYVEYPNVNIVTEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y AN   ++ S +M    L++ R
Sbjct: 122 LISASRSYEANAAVVQGSKEMFQRALEIGR 151


>gi|120554031|ref|YP_958382.1| flagellar basal body rod protein FlgC [Marinobacter aquaeolei VT8]
 gi|120323880|gb|ABM18195.1| flagellar basal-body rod protein FlgC [Marinobacter aquaeolei VT8]
          Length = 149

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 45/147 (30%), Positives = 63/147 (42%), Gaps = 18/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L     IA SG+  QS R+   + NIANA T   +     YR +   F  +         
Sbjct: 3   LGNIFDIAGSGMTAQSLRLNTTASNIANAETASSSTD-TTYRARKPVFAAIQQAMLNPDQ 61

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GVRV+ I    +     ++P HP AN  G V YPNVNV+ E ADM  
Sbjct: 62  QGFGMGSEEGPGAGVRVEGIVESDAELQMRYEPNHPAANEEGYVYYPNVNVVEEMADMMS 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++R +  N+  +  +  MM   L L +
Sbjct: 122 SSRSFQMNVDVMNTAKSMMQRILTLGQ 148


>gi|145298489|ref|YP_001141330.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851261|gb|ABO89582.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 139

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           L     IA S ++ QS R+  ++ N+ANA +   +     Y  +   F   +        
Sbjct: 3   LFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSV-EKTYHARRPIFAAQLDQAMSDKQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV VK I   ++  ++E++P HP+A+  G +  PNVN++ E ADM   +R Y  N+Q
Sbjct: 62  SSVGVEVKGIVESKAPLLKEYNPNHPMADDDGYIFKPNVNMVEEMADMINASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+  TL+L +
Sbjct: 122 VADSAKKMLQQTLNLGK 138


>gi|292487937|ref|YP_003530812.1| flagellar basal-body rod protein FlgC [Erwinia amylovora CFBP1430]
 gi|292899156|ref|YP_003538525.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291199004|emb|CBJ46115.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291553359|emb|CBA20404.1| Flagellar basal-body rod protein flgC [Erwinia amylovora CFBP1430]
 gi|312172058|emb|CBX80315.1| Flagellar basal-body rod protein flgC [Erwinia amylovora ATCC
           BAA-2158]
          Length = 134

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           L +   IA S +A QS R+ + + N+ANA +    P   PY  K + F+        +GG
Sbjct: 3   LTSIFDIAGSAMAAQSQRLNVSASNLANADS-ATGPDGQPYVAKQVVFQTNAAPGSPTGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +     ++PG+P+A+A G +K PNV+V+ ET +    +R Y AN++ +  
Sbjct: 62  VRVAEVIDDPTPAKLVYEPGNPMADARGYIKMPNVDVVAETVNSMSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL + +
Sbjct: 122 VKQMMMKTLTMGQ 134


>gi|209884536|ref|YP_002288393.1| flagellar basal-body rod protein FlgC [Oligotropha carboxidovorans
           OM5]
 gi|209872732|gb|ACI92528.1| flagellar basal-body rod protein FlgC [Oligotropha carboxidovorans
           OM5]
          Length = 141

 Score =  174 bits (442), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 66/137 (48%), Positives = 85/137 (62%), Gaps = 5/137 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+L  S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  S  
Sbjct: 5   MDFL-KSMSIATSGLRAQAGRMRVISENIANADSTAGTAGGDPYRRKVPTFVSALDRSLD 63

Query: 61  VRVKKIGV----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +V  +G       S+F  + +PG+P A+A+G VKYPNVN LVE  DMRE  R Y ANL 
Sbjct: 64  AQVVSLGRIKTDTASSFRIKHEPGNPAADANGNVKYPNVNSLVEMTDMREAQRSYEANLN 123

Query: 117 TIKQSHDMMTTTLDLLR 133
            I  +  M+  TLD+L+
Sbjct: 124 IISATRRMIQRTLDILK 140


>gi|317133491|ref|YP_004092805.1| flagellar basal-body rod protein FlgC [Ethanoligenens harbinense
           YUAN-3]
 gi|315471470|gb|ADU28074.1| flagellar basal-body rod protein FlgC [Ethanoligenens harbinense
           YUAN-3]
          Length = 143

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 14/143 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
            + + +I  SGL  Q  RM +ISEN+AN  TT +T    PY+RKT+SF E          
Sbjct: 2   FLNALNIPGSGLTAQRLRMDVISENLANQDTT-ETADGGPYQRKTVSFSERTQPTFDGYL 60

Query: 57  ------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                 G GGV+V  I  D S F   +DP +P A A G V+ PNV+ + E  D+ E++R 
Sbjct: 61  AGATGEGPGGVQVDAIETDSSDFKLSYDPTNPNAGADGYVRLPNVDTVTEMTDLMESSRS 120

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y A++        M  ++LD+ +
Sbjct: 121 YSADVTAFNALKGMAVSSLDIGK 143


>gi|260438810|ref|ZP_05792626.1| flagellar basal-body rod protein FlgC [Butyrivibrio crossotus DSM
           2876]
 gi|292808799|gb|EFF68004.1| flagellar basal-body rod protein FlgC [Butyrivibrio crossotus DSM
           2876]
          Length = 145

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 15/143 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI------------SF 51
           + +  +IA SG+  Q  R  IIS NIANA TT    G  PY R+ +             F
Sbjct: 3   IFSGMNIAASGMTAQRLRTDIISGNIANANTTRTAEGG-PYTRRNVLLTQKTSLNFGDVF 61

Query: 52  EEVMHGSG-GVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
            E + G+G GV+V  I  D ++ +   +DP HP A+ +G VKYPNVN++ E  D+ +  R
Sbjct: 62  NETLQGAGNGVKVVAITKDTETDYNLVYDPSHPDADENGYVKYPNVNIVNEMTDLIDATR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLL 132
            Y AN      S  M +  L+L+
Sbjct: 122 SYEANATAFDASKSMASKGLELM 144


>gi|85716543|ref|ZP_01047513.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
 gi|85696544|gb|EAQ34432.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
          Length = 141

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
            + S  IA SGL  Q+ RM++ISENIAN  +T  TPG DPYRRK  +F   +  +   RV
Sbjct: 8   FMRSMSIATSGLRAQAGRMRVISENIANVDSTAQTPGGDPYRRKVPTFSSALDRTLDARV 67

Query: 64  KKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +G    D STF  +++P +P A+ASG VKYPNVN LVE  DMR   R Y ANL  I  
Sbjct: 68  VTLGRVKPDMSTFRVKYEPSNPAADASGNVKYPNVNSLVEMTDMRNAQRSYEANLNIISA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|117621411|ref|YP_857345.1| flagellar basal body rod protein FlgC [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562818|gb|ABK39766.1| flagellar basal-body rod protein FlgC [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 139

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           L     IA S ++ QS R+  ++ N+ANA +   +     Y  +   F   +        
Sbjct: 3   LFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSV-EKTYHARRPIFAAQLDQAMSDKQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV VK I   ++  ++E++P HP+A+  G +  PNVN++ E ADM   +R Y  N+Q
Sbjct: 62  ASAGVEVKGIVESEAPLLKEYNPNHPMADKDGFIFKPNVNMVEEMADMINASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+  TL+L +
Sbjct: 122 VADSAKKMLQQTLNLGK 138


>gi|163852027|ref|YP_001640070.1| flagellar basal body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218530781|ref|YP_002421597.1| flagellar basal body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240139294|ref|YP_002963769.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           AM1]
 gi|254561750|ref|YP_003068845.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           DM4]
 gi|163663632|gb|ABY30999.1| flagellar basal-body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218523084|gb|ACK83669.1| flagellar basal-body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240009266|gb|ACS40492.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           AM1]
 gi|254269028|emb|CAX24989.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           DM4]
          Length = 136

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 61/136 (44%), Positives = 82/136 (60%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           MD+L  S  IA SGL  QS RM+II+ENIANA +T  T G DPYRRK  +F         
Sbjct: 1   MDFL-KSLGIAASGLKAQSGRMRIIAENIANADSTAQTAGGDPYRRKIPTFTSRFDNELN 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V   ++  D + F  + DPG+P A+A G V+ PNVN L+E  DMRE  R Y ANL  
Sbjct: 60  ASVVEAGRVRRDPTPFRTKHDPGNPAADARGEVRLPNVNGLIENMDMREAQRSYEANLNM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  M++ TL++L+
Sbjct: 120 VTATRRMISRTLEILK 135


>gi|259908814|ref|YP_002649170.1| flagellar basal body rod protein FlgC [Erwinia pyrifoliae Ep1/96]
 gi|224964436|emb|CAX55945.1| Cell-proximal portion of basal-body rod [Erwinia pyrifoliae Ep1/96]
 gi|283478796|emb|CAY74712.1| Flagellar basal-body rod protein flgC [Erwinia pyrifoliae DSM
           12163]
 gi|310767288|gb|ADP12238.1| flagellar basal body rod protein FlgC [Erwinia sp. Ejp617]
          Length = 134

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           L     IA S +A QS R+ + + N+ANA +    P   PY  K + F+        +GG
Sbjct: 3   LTRIFDIAGSAMAAQSQRLNVSASNLANADSV-TGPDGQPYVAKQVVFQTNAAPGSPTGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++  D +     ++PG+P+A+A G +K PNV+V+ ET +    +R Y AN++ +  
Sbjct: 62  VRVAEVINDPTPAKLVYEPGNPMADARGYIKMPNVDVVAETVNTLSASRSYQANVEVLNT 121

Query: 121 SHDMMTTTLDLLR 133
              MM  TL + +
Sbjct: 122 VKQMMMKTLTMGQ 134


>gi|325982373|ref|YP_004294775.1| flagellar basal-body rod protein FlgC [Nitrosomonas sp. AL212]
 gi|325531892|gb|ADZ26613.1| flagellar basal-body rod protein FlgC [Nitrosomonas sp. AL212]
          Length = 133

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV---MHGSGG 60
           L     IA+S ++ QS R+ +++ N++NA +   + G +PYR + + F  +    +G+ G
Sbjct: 2   LFNVFGIASSAMSAQSQRLNVVASNLSNADSVTSSTG-EPYRGRQVVFSTLRADANGAAG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +  D S   + F+P HP AN SG V  PNVNV+ E  +M   +R Y  ++  +  
Sbjct: 61  VKVAGVIHDPSPMRQVFEPNHPFANTSGYVTMPNVNVVDEMVNMMSASRSYQNSVDMMNT 120

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL L +
Sbjct: 121 TKSLLQKTLTLGQ 133


>gi|197104391|ref|YP_002129768.1| flagellar basal-body rod protein FlgC [Phenylobacterium zucineum
           HLK1]
 gi|196477811|gb|ACG77339.1| flagellar basal-body rod protein FlgC [Phenylobacterium zucineum
           HLK1]
          Length = 138

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 2/126 (1%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE--VMHGSGGVRVKKIG 67
           IA S L  Q ARM+II+EN+ANA +T   PG DPYRR+   FE   V   + GVR+ ++ 
Sbjct: 12  IAASALRAQQARMRIIAENLANANSTAKVPGGDPYRRQAPVFEPTRVAGAAQGVRMSRVE 71

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            DQS F  E+DPGHP A+  G VK PNVN LVE  DMRE  R Y ANL  I+ +  M T 
Sbjct: 72  PDQSAFRMEYDPGHPSADDRGYVKLPNVNSLVEAMDMREAQRAYEANLNVIETARAMETR 131

Query: 128 TLDLLR 133
           TLDLL+
Sbjct: 132 TLDLLK 137


>gi|160939631|ref|ZP_02086979.1| hypothetical protein CLOBOL_04523 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437422|gb|EDP15186.1| hypothetical protein CLOBOL_04523 [Clostridium bolteae ATCC
           BAA-613]
          Length = 144

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 15/146 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           M YL  S +I  S L  +  R  II +N+AN  TT    G  PY+RK + F E       
Sbjct: 1   MGYL-DSLNITGSALTAERFRTDIIMQNLANQNTTRTAEGG-PYKRKQVVFRENTLNFKS 58

Query: 54  ------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                     +GGV V+++   Q+  V  +DP HP A+  G V  PNVN   E  D+   
Sbjct: 59  ELGKAMTKAENGGVFVEEVVESQNPSVPVYDPDHPDADEDGYVMMPNVNSAEEMVDLMAA 118

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN+  +  +  M    L++ +
Sbjct: 119 SRAYEANVTALNVAKSMALKALEIGK 144


>gi|83858796|ref|ZP_00952318.1| flagellar basal-body rod protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853619|gb|EAP91471.1| flagellar basal-body rod protein [Oceanicaulis alexandrii HTCC2633]
          Length = 138

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 58/135 (42%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
           D +  +  I+ +GL  QS+RM++I+EN+ANA +T  TP  +PY+R+   FE       G 
Sbjct: 3   DRVSETLQISAAGLRAQSSRMRVIAENVANAESTARTPEENPYQRQIPVFESEFDRQVGT 62

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VR+  + +D+S F   ++PGHP A+  G VKYPNV+ LVE  DMR+  R Y ANL  +
Sbjct: 63  ELVRMNDVALDESDFRMVYEPGHPAADGEGYVKYPNVSSLVELMDMRDAQRSYEANLTMV 122

Query: 119 KQSHDMMTTTLDLLR 133
           + +  M+  TLDLLR
Sbjct: 123 EGTRRMLERTLDLLR 137


>gi|295696111|ref|YP_003589349.1| flagellar basal-body rod protein FlgC [Bacillus tusciae DSM 2912]
 gi|295411713|gb|ADG06205.1| flagellar basal-body rod protein FlgC [Bacillus tusciae DSM 2912]
          Length = 155

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 71/150 (47%), Gaps = 22/150 (14%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTIS---------FEEVM 55
            +  I+ SGL+ Q  RM +I+ NIANA TT    G+  PYRR+ +          F   +
Sbjct: 5   DTFAISGSGLSAQRLRMDVIAGNIANADTTRRPDGTPGPYRRRMVVMEPQPAPGSFAAAL 64

Query: 56  HGSGG------VRVKKIGVDQSTFVEEFDPGHPVANAS------GIVKYPNVNVLVETAD 103
             +GG      VRV  I  D S F  ++DP +P A  +      G V+ PNV+V  E  D
Sbjct: 65  ASAGGTGVPEGVRVSAIVEDPSPFQLKYDPSNPDAVQNPASPLYGYVQLPNVDVATEMVD 124

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y AN+  +     M    LDL R
Sbjct: 125 LISASRAYEANVTALDAGKMMAVKALDLGR 154


>gi|327441057|dbj|BAK17422.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
          Length = 154

 Score =  173 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 21/151 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTP---GSDPYRRKTISFEEVMHG--- 57
           +  S +   S L  Q  RM +IS NIAN  TT         +PYR+K+++ +E       
Sbjct: 3   IFHSMNTTASALTTQRLRMDVISSNIANVDTTRAKQVNGEWEPYRKKSVTLKEQEGQFSN 62

Query: 58  --------------SGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                           GV+V  I  D ++ F   +DP HP ANA G V+  NV+VL E  
Sbjct: 63  FLNMAIGKTEKNGIGNGVKVSSIKEDTETPFKLMYDPSHPDANAEGYVQMSNVDVLKEMV 122

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+   +R Y AN+     + +M+T  L++ +
Sbjct: 123 DLISASRSYEANITAFNANKNMLTKALEIGK 153


>gi|330720177|gb|EGG98566.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC2047]
          Length = 150

 Score =  173 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 20/149 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     +A +G++ Q+ R+  ++ NIANA +   + G + YR +   F  +         
Sbjct: 3   LNNIFDVAGTGMSAQTIRLNTVASNIANAESVSSSTG-ETYRARHPVFSVIRDQVNQDML 61

Query: 60  ---------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                          GV+V  I   Q+   +++ P HP A+ +G V YPNV+V+ E ADM
Sbjct: 62  GGGFNNNFNGMSAGYGVKVDGIVESQAELRQKYQPDHPSADENGYVYYPNVDVVTEMADM 121

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +R Y  N++ +  +  MM   L L +
Sbjct: 122 ISASRAYQTNVEIMNTAKQMMQRVLTLGQ 150


>gi|88799019|ref|ZP_01114600.1| flagellar basal-body rod protein FlgC [Reinekea sp. MED297]
 gi|88778246|gb|EAR09440.1| flagellar basal-body rod protein FlgC [Reinekea sp. MED297]
          Length = 146

 Score =  173 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L     I+ SG+  QS R+   + N+ANA++   +   + YR +   F+ +         
Sbjct: 3   LGNVFDISGSGMNAQSIRLNTTASNLANAQSVSSSID-ETYRARKPVFQHIQSQYIDRSL 61

Query: 58  ---------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GV V  I    +     ++P HP+A+  G V YPNVNV+ E ADM   +
Sbjct: 62  VPVDMDYDVGNGVEVAAIVEKDAPLEIRYEPTHPMADEEGYVYYPNVNVVEEMADMMSAS 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R +  N++    +  +M  TL + +
Sbjct: 122 RSFTVNVEVFNTAKTLMQKTLTMGK 146


>gi|332531616|ref|ZP_08407513.1| flagellar basal-body rod protein FlgC [Hylemonella gracilis ATCC
           19624]
 gi|332038979|gb|EGI75408.1| flagellar basal-body rod protein FlgC [Hylemonella gracilis ATCC
           19624]
          Length = 136

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-----EVMHGS 58
           + +   ++ S ++ Q+ R+ +++ N+ANA      P    Y+ + + FE     E   G+
Sbjct: 3   MFSIFGVSGSAISAQAQRLNVVASNLANADAVAG-PDGQFYKARQVVFETLPFDEATPGA 61

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV++  +   Q+     ++P HP A+A G V   NVN + E  +M   +R Y  N++ +
Sbjct: 62  AGVKINAVTESQAPARRTYEPTHPSADADGYVNQSNVNPVEEMVNMISASRSYQNNVEVM 121

Query: 119 KQSHDMMTTTLDLLR 133
             +  ++  TL + +
Sbjct: 122 NTAKTLLLKTLQMGQ 136


>gi|317406203|gb|EFV86452.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
           C54]
          Length = 139

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-- 61
           L++   IA S L+ QS RM + + N+ANA +    P   PYR + + F+        +  
Sbjct: 3   LLSIFDIAGSALSAQSQRMNVAASNMANADSVVG-PDGQPYRARQVVFQVNPPAGQALGR 61

Query: 62  -----RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
                RV  + VDQS   + +DP HP+A+A G V  PNV+ + ET +M   +R Y AN++
Sbjct: 62  EIGGVRVAGVVVDQSPLKQVYDPKHPLADAQGYVSMPNVDPVAETVNMIAASRSYQANVE 121

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  +M  TL + +
Sbjct: 122 VLNTAKSLMQKTLTIGQ 138


>gi|170741834|ref|YP_001770489.1| flagellar basal body rod protein FlgC [Methylobacterium sp. 4-46]
 gi|168196108|gb|ACA18055.1| flagellar basal-body rod protein FlgC [Methylobacterium sp. 4-46]
          Length = 138

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 71/136 (52%), Positives = 102/136 (75%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L ASA +A++G+ VQS R+++++ENIANA++TG  PGSDPY+RKTI+F   +  + G
Sbjct: 2   IDPLTASARLASAGMEVQSLRLRVVAENIANAQSTGVDPGSDPYQRKTITFRSELDRAAG 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V++IGVD++ F  E +PG+P A+ +G VKYPNVNVL+E  DMRE NR Y ANLQ 
Sbjct: 62  AATVGVREIGVDRAPFRVEHEPGNPAADENGDVKYPNVNVLIEMTDMREANRSYEANLQM 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  ++ + +DLL+
Sbjct: 122 IKQARALVASVIDLLK 137


>gi|83594157|ref|YP_427909.1| flagellar basal body rod protein FlgC [Rhodospirillum rubrum ATCC
           11170]
 gi|83577071|gb|ABC23622.1| Flagellar basal-body rod protein FlgC [Rhodospirillum rubrum ATCC
           11170]
          Length = 137

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 61/136 (44%), Positives = 83/136 (61%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  +A IA SGL  Q+ R++ I++N+ANA +  +  G DPYRR+ ++F+ VM    G
Sbjct: 1   MDELKQTAAIATSGLKAQTERLRTIAQNMANADSMAERQGEDPYRRRVVTFKSVMDREVG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              VR  ++  D S F  ++DP HP A+A G V  PNVN +VE  DMRE  R Y ANL  
Sbjct: 61  AEMVRTGRVREDMSAFTRKYDPSHPGADAEGYVLAPNVNPMVEMMDMREAQRSYEANLNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I  + +M   TL+LLR
Sbjct: 121 ITATREMTRNTLELLR 136


>gi|299534789|ref|ZP_07048119.1| flagellar basal body rod protein FlgC [Lysinibacillus fusiformis
           ZC1]
 gi|298729877|gb|EFI70422.1| flagellar basal body rod protein FlgC [Lysinibacillus fusiformis
           ZC1]
          Length = 153

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 21/151 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG--- 57
           +    +   S L  Q  RM +IS N+AN  TT         +PYRRK+++          
Sbjct: 3   IFHGMNTTASALTAQRLRMDVISSNMANMDTTRARQVNGEWEPYRRKSVTLSAQEGQFSN 62

Query: 58  --------------SGGVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                           GV++ +I  DQ + F   +DP HP ANA G V  PNV+ L E  
Sbjct: 63  FLNVALGKNAKSGVGNGVKITRISEDQETPFKLVYDPTHPDANADGYVNMPNVDPLKEMV 122

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+    R Y AN+     +  M+T  L++ +
Sbjct: 123 DLMSATRSYEANITVFNANKSMLTKALEIGK 153


>gi|320529387|ref|ZP_08030475.1| flagellar basal-body rod protein FlgC [Selenomonas artemidis F0399]
 gi|320138353|gb|EFW30247.1| flagellar basal-body rod protein FlgC [Selenomonas artemidis F0399]
          Length = 151

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 69/147 (46%), Gaps = 19/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +      A SGL  +  RM +IS NIANA TT    G   Y R+ + F+    G+G    
Sbjct: 3   MFLGIDAAASGLTAERLRMDVISNNIANANTTR-AQGGGAYHRRYVVFQPREKGNGIGFE 61

Query: 60  --------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GVR   I  D+S  V  ++PGHP ANA G V+ PNVN++ E  DM 
Sbjct: 62  SFLARASERMRPGDGVRALSIETDRSPGVLVYEPGHPDANAEGYVERPNVNIVSEMVDMI 121

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLL 132
             +R Y AN  TI  +  M+   L + 
Sbjct: 122 SASRGYEANTTTINAAKSMVNAALRIG 148


>gi|1448943|gb|AAB04619.1| flagellar basal body distal rod protein [Borrelia burgdorferi]
          Length = 152

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L +S ++A++GL  Q  R+ +IS NIAN  +T  TP  D    + I F   ++       
Sbjct: 3   LFSSINVASTGLTAQRLRIDVISNNIANV-STSRTPDGDLIEGQRIIFAPRVNNPYWKGP 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                       GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  D
Sbjct: 62  FIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN   I  S  M  + L +L+
Sbjct: 122 MISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|167623359|ref|YP_001673653.1| flagellar basal body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
 gi|167353381|gb|ABZ75994.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
          Length = 138

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           L    ++A SG++ QS R+   + NIANA +   + G + YR +   FE  M        
Sbjct: 3   LFNIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVG-ETYRARHPIFEAEMSKAQQHQS 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S  V VK I        +EF P HP+A+  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  ASASVAVKGIVESDLPLNKEFSPDHPMADTDGFIYKPNVNVMEEMANMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  M+  TL + +
Sbjct: 122 VTEAAKSMLQQTLRIGK 138


>gi|92116946|ref|YP_576675.1| flagellar basal body rod protein FlgC [Nitrobacter hamburgensis
           X14]
 gi|91799840|gb|ABE62215.1| flagellar basal-body rod protein FlgC [Nitrobacter hamburgensis
           X14]
          Length = 141

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 63/133 (47%), Positives = 82/133 (61%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
            + S  IA SGL  Q+ RM++ISENIANA +T   PG DPYRRK  +F   +  +   +V
Sbjct: 8   FMRSMSIATSGLRAQAGRMRVISENIANADSTAQVPGGDPYRRKVPTFSSALDRALDAKV 67

Query: 64  KKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +G    D STF  + +P +P A+ASG VKYPNVN LVE  DMR+  R Y ANL  I  
Sbjct: 68  VSLGRVKPDMSTFRIKHEPSNPAADASGNVKYPNVNSLVEMTDMRDAQRSYEANLNIISA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|157961169|ref|YP_001501203.1| flagellar basal body rod protein FlgC [Shewanella pealeana ATCC
           700345]
 gi|157846169|gb|ABV86668.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
           700345]
          Length = 138

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           L    ++A SG++ QS R+   + NIANA +   + G + YR +   FE  M        
Sbjct: 3   LFNIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVG-ETYRARHPIFEAEMSKAQQHQS 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +  V VK I        +EF P HP+A+  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  AAQSVAVKGIVESDLPLNKEFSPDHPMADTDGFIYKPNVNVMEEMANMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  M+  TL + +
Sbjct: 122 VTEAAKSMLQQTLRIGK 138


>gi|313895871|ref|ZP_07829425.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312975296|gb|EFR40757.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 151

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 69/147 (46%), Gaps = 19/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +      A SGL  +  RM +IS NIANA TT    G   Y R+ + F+    G+G    
Sbjct: 3   MFLGIDAAASGLTAERLRMDVISNNIANANTTR-AQGGGAYHRRYVVFQPREKGNGIGFE 61

Query: 60  --------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GVR   I  D+S  V  ++PGHP ANA G V+ PNVN++ E  DM 
Sbjct: 62  SFLARASERMRPGDGVRALSIETDRSPGVLVYEPGHPDANAEGYVERPNVNIVSEMVDMI 121

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLL 132
             +R Y AN  TI  +  M+   L + 
Sbjct: 122 SASRGYEANATTINAAKSMVNAALRIG 148


>gi|304404242|ref|ZP_07385904.1| flagellar basal-body rod protein FlgC [Paenibacillus
           curdlanolyticus YK9]
 gi|304347220|gb|EFM13052.1| flagellar basal-body rod protein FlgC [Paenibacillus
           curdlanolyticus YK9]
          Length = 149

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 17/147 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTIS-------FEE 53
           L        S L  Q  RM +IS NIANA TT     +    PY RK +        F +
Sbjct: 3   LSNGFDANASALTAQRLRMDVISSNIANAETTRAGYVNGKFVPYTRKMVVMEPANKSFSD 62

Query: 54  VMHG-------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           V+ G       + GV+V KI  D++     ++P HP A+  G V  PNV++  E  DM  
Sbjct: 63  VLSGQMNGTAANPGVKVTKIVEDKTPPKLVYNPSHPDADEFGYVSMPNVDIAKEMIDMIS 122

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+  +  +  M    L++ R
Sbjct: 123 ASRSYEANITALNATKGMFAKALEIGR 149


>gi|115523177|ref|YP_780088.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
 gi|115517124|gb|ABJ05108.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
          Length = 138

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 71/136 (52%), Positives = 96/136 (70%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS  IA+SGL VQS R++++SEN+ANA +TG  PG++PYRRKT +F   M  + G
Sbjct: 2   IDPLQASIQIASSGLEVQSTRLRVVSENLANANSTGRAPGAEPYRRKTTTFAAEMDRAQG 61

Query: 61  VRVKKIGVD---QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           VRV K+      ++ F  E++P HP A+  G VK PNVN L+E ADMRETNR Y ANLQ 
Sbjct: 62  VRVVKVKDVGVDRTPFRVEYEPSHPAADQDGYVKLPNVNTLIEMADMRETNRSYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ+  M++ T+D+LR
Sbjct: 122 VKQARSMVSMTIDMLR 137


>gi|323490140|ref|ZP_08095360.1| flagellar basal body rod protein FlgC [Planococcus donghaensis
           MPA1U2]
 gi|323396188|gb|EGA89014.1| flagellar basal body rod protein FlgC [Planococcus donghaensis
           MPA1U2]
          Length = 151

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 19/149 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDT-PGSD--PYRRKTI--------SFE 52
           L    +I++SGL     RM ++S NIANA T        +  PYRRKT+         F 
Sbjct: 3   LFTGFNISSSGLTANRLRMDVVSANIANANTNRAELVDGEWMPYRRKTVELSQSGTSPFS 62

Query: 53  EVMHGS--------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
             +  +         GV+   I  DQ+ F   +DP HP A   G V+  NV+ L E  D+
Sbjct: 63  NQLQSAINRGNTAVTGVKASGIKEDQTPFTLRYDPEHPDAGEDGYVRMSNVDPLQEMVDL 122

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  +  S  M    L++ +
Sbjct: 123 MSATRSYEANVTALNASKSMFMKALEIGK 151


>gi|114570487|ref|YP_757167.1| flagellar basal body rod protein FlgC [Maricaulis maris MCS10]
 gi|114340949|gb|ABI66229.1| flagellar basal-body rod protein FlgC [Maricaulis maris MCS10]
          Length = 137

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 65/136 (47%), Positives = 80/136 (58%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  I+  G+  Q+ARM+IISENIANA +T    G DPYRR+   FE  +  + G
Sbjct: 1   MGNASDTMQISAFGMRAQAARMRIISENIANADSTAREAGGDPYRRQVPVFEAELDRATG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              VR+  +  DQS F  E+DPGHP ANA G V+Y NV  LVE  DMRE  R Y ANL  
Sbjct: 61  LNAVRMTDVAHDQSEFTLEYDPGHPAANAEGYVQYSNVQTLVEMMDMREAMRSYEANLNM 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I+ +  M    LDLLR
Sbjct: 121 IENARRMQERALDLLR 136


>gi|221069324|ref|ZP_03545429.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni KF-1]
 gi|264676568|ref|YP_003276474.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni
           CNB-2]
 gi|299531288|ref|ZP_07044698.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni S44]
 gi|220714347|gb|EED69715.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni KF-1]
 gi|262207080|gb|ACY31178.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni
           CNB-2]
 gi|298720695|gb|EFI61642.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni S44]
          Length = 134

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 67/133 (50%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           + +  +I+ S ++ QS R+ +++ N+AN       P    Y+ + + F+ V     GS G
Sbjct: 3   MFSIFNISGSAVSAQSQRLNVVASNLANVDAVAG-PDGSVYKARQVVFQTVPMGNDGSAG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  I  D +      DP +P+A+  G V + NV+ + E  +M   +R Y  N++ +  
Sbjct: 62  VKVNAISEDNTPGRRIHDPSNPLADGEGYVTHSNVSAVDEMVNMISASRSYQNNVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 AKTLLLKTLQMGQ 134


>gi|304438470|ref|ZP_07398410.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368553|gb|EFM22238.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 151

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 51/147 (34%), Positives = 67/147 (45%), Gaps = 19/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +      A SGL  +  RM +IS NIANA TT  T G   Y R+ + F+    G G    
Sbjct: 3   MFLGIDTAASGLTAERLRMDVISNNIANANTTR-TQGGGAYHRRYVVFQPREKGHGIGFE 61

Query: 60  --------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GVR   I  D +     ++PGHP ANA G V+ PNVN++ E  DM 
Sbjct: 62  SFLARASNRMRPGDGVRAVGIRTDNTQGPLVYEPGHPDANADGYVERPNVNIVAEMVDMI 121

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLL 132
             +R Y AN  TI  +  M+   L + 
Sbjct: 122 SASRGYEANTTTINAAKSMVNAALRIG 148


>gi|149911704|ref|ZP_01900312.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Moritella sp. PE36]
 gi|149805234|gb|EDM65251.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Moritella sp. PE36]
          Length = 140

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     IA S ++ QS R+   + N+ANA +   + G + Y+ +   F+  +  +     
Sbjct: 3   LFRVFDIAGSAMSAQSVRLNTTASNLANANSVSSSAG-ETYKARYPIFQAQLDQANFSQN 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV V  I    +  V EF+P HP+A+ +G V  PNVN++ E A+M   +R Y  N+Q
Sbjct: 62  EAVGVNVAGIVESDAPLVNEFNPNHPLADENGYVYRPNVNIMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+  TL L +
Sbjct: 122 IADAAKKMLNKTLALGQ 138


>gi|87119678|ref|ZP_01075575.1| Flagellar basal-body rod protein FlgC [Marinomonas sp. MED121]
 gi|86165154|gb|EAQ66422.1| Flagellar basal-body rod protein FlgC [Marinomonas sp. MED121]
          Length = 149

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     I+ S ++ Q+ R+  ++ NIANA +   +     YR +   F  +M  S     
Sbjct: 3   LNNIFAISGSAMSAQTIRLNTVASNIANADSVASSED-QTYRARKPVFSTMMQESMRGYG 61

Query: 60  -------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV VK I    +     ++P HP+AN SG V Y NVN + E ADM  
Sbjct: 62  WNDVSNDEFGAGVGVEVKGIVESDAPLQPRYEPDHPMANESGYVYYSNVNPVEEMADMMS 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N++ +  +  MM   L L +
Sbjct: 122 ASRSFQTNVEVMNSAKSMMQKMLTLGQ 148


>gi|149375036|ref|ZP_01892809.1| flagellar basal-body rod protein C [Marinobacter algicola DG893]
 gi|149360925|gb|EDM49376.1| flagellar basal-body rod protein C [Marinobacter algicola DG893]
          Length = 149

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 45/147 (30%), Positives = 63/147 (42%), Gaps = 18/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L     IA SG+  QS R+   + NIANA T   +     YR +   F  +         
Sbjct: 3   LGNIFDIAGSGMTAQSLRLNTTASNIANAETASSSTD-QTYRARKPVFAAIQQSMLNPSQ 61

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GVRV+ I    +     ++P HP AN  G V YPNVNV+ E ADM  
Sbjct: 62  QSLAFGSDTGPGAGVRVEGIVESDAELQMRYEPDHPAANEDGYVFYPNVNVVEEMADMMS 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++R +  N+  +  +  MM   L L +
Sbjct: 122 SSRSFQMNVDIMNSAKSMMQRILTLGQ 148


>gi|251780808|ref|ZP_04823728.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243085123|gb|EES51013.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 135

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 3/132 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
             S  I+ +G++ +  RM  I+ N+ N+ TT    GS PY RK   F+E +  +    G+
Sbjct: 4   FTSMQISATGISAERLRMDTITSNMTNSSTTRSADGSGPYVRKIAVFQEALDENRKMAGI 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +  KI  D+S F   + P  P A+ +G V  PNVNVL E ADM  + R Y AN++T+   
Sbjct: 64  KPVKIVEDKSPFRRVYKPTDPDADETGYVTMPNVNVLNEMADMMVSTRSYEANVETLNAL 123

Query: 122 HDMMTTTLDLLR 133
             M +  L++ +
Sbjct: 124 KGMFSKALEIGK 135


>gi|83747656|ref|ZP_00944692.1| FlgC [Ralstonia solanacearum UW551]
 gi|300696911|ref|YP_003747572.1| FlgC: flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
 gi|83725708|gb|EAP72850.1| FlgC [Ralstonia solanacearum UW551]
 gi|299073635|emb|CBJ53155.1| FlgC: Flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
          Length = 135

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 5/134 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---G 60
           L     +A S L  QS RM +++ N+ANA +    P    YR K + F       G   G
Sbjct: 3   LFKVMDVAGSALTAQSKRMNVVASNLANAESV-TGPDGTAYRAKQVVFSPEQGTDGYATG 61

Query: 61  VRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           V V  +  D  +       PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++   
Sbjct: 62  VSVDGVVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVAN 121

Query: 120 QSHDMMTTTLDLLR 133
            +  M    L L +
Sbjct: 122 TTKTMAAKALTLGQ 135


>gi|32490788|ref|NP_871042.1| hypothetical protein WGLp039 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165994|dbj|BAC24185.1| flgC [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 133

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 5/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
           L+    I+ S L  QS R+ + + N+ANA +   +   +PY  K + F+         GG
Sbjct: 3   LLNIFDISGSALIAQSCRLNVSASNMANAESL--SNNGNPYSSKQVVFKLNTNFAQEIGG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+VKKI  D++ +   +DPG+P+A++ G VK  NVN++ E  +   ++R Y AN++ I  
Sbjct: 61  VKVKKIIEDKTPWKILYDPGNPLADSKGYVKSSNVNMISEMINTISSSRSYQANVEVINT 120

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TL L +
Sbjct: 121 ARSMILKTLTLGQ 133


>gi|226939376|ref|YP_002794449.1| FlgC1 [Laribacter hongkongensis HLHK9]
 gi|226714302|gb|ACO73440.1| FlgC1 [Laribacter hongkongensis HLHK9]
          Length = 137

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 6/131 (4%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-----VR 62
             IA S L  QS R+ +++ NIAN  +   + G +PY+ + I F  +           V 
Sbjct: 7   LDIAGSALTAQSKRLNVVASNIANVDSAVASNG-EPYKARRIVFTPIPVSPAEPKVAKVA 65

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V  I  DQS     ++P HP+A+A+G V  PN+N + E  DM   +R Y  N++ +  + 
Sbjct: 66  VTAIVEDQSPPRMNYNPAHPLADANGYVTMPNINPVEEMTDMISASRAYQTNVEMMNTTK 125

Query: 123 DMMTTTLDLLR 133
            ++  TL + +
Sbjct: 126 QLLQKTLSIGQ 136


>gi|220925380|ref|YP_002500682.1| flagellar basal body rod protein FlgC [Methylobacterium nodulans
           ORS 2060]
 gi|219949987|gb|ACL60379.1| flagellar basal-body rod protein FlgC [Methylobacterium nodulans
           ORS 2060]
          Length = 136

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/136 (44%), Positives = 88/136 (64%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           MD++  +  IA SGL  QS RM++ISENIANA +   + G++PYRRK  +F   +     
Sbjct: 1   MDFM-KAIGIAASGLRAQSGRMRVISENIANADSEPKSAGAEPYRRKVPTFANRLDRELD 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V + ++  DQS F  + +PG+P A+A+G V+ PNVN+LVET DMRE  R Y ANL  
Sbjct: 60  ASVVELGRVRRDQSPFRTKHEPGNPAADANGEVRLPNVNLLVETVDMREAQRSYEANLNM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           I  +  M++ T+D+L+
Sbjct: 120 ITAARRMISRTIDILK 135


>gi|90021857|ref|YP_527684.1| flagellar basal body rod protein FlgC [Saccharophagus degradans
           2-40]
 gi|89951457|gb|ABD81472.1| flagellar basal-body rod protein FlgC [Saccharophagus degradans
           2-40]
          Length = 144

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 14/143 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L      A SG+  QS R+   + NIANA T   +     YR +   F  V  G      
Sbjct: 3   LSGIFDTAGSGMNAQSVRLNTTASNIANAETASSSAD-TVYRGRHPVFATVQAGYMQGQV 61

Query: 58  -------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                    GV+V  I    +     ++PGHP A+  G V YPNVN++ E A+M   +R 
Sbjct: 62  GALDDEQEMGVQVMGIVESDAPLQRRYEPGHPQADEEGYVHYPNVNIVEEMANMISASRS 121

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           +  N++ +  +  M+   L L +
Sbjct: 122 FQMNVEVMNSAKQMVQRVLQLGQ 144


>gi|114566383|ref|YP_753537.1| flagellar basal body rod protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337318|gb|ABI68166.1| flagellar basal body rod protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 155

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 23/153 (15%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            + S   + SGL  Q  RM  I+ N+AN  TT     + PYRR+ + FE     +     
Sbjct: 3   FLNSIDTSASGLTAQRLRMDTIASNMANVETTRVDNRTGPYRRQVVVFEARNASAPKKRF 62

Query: 59  ---------------GGVRVKKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                           GVRVK+I     +++ +   +DP HP A+  G V YPNVN++ E
Sbjct: 63  QRFLEEQSQTFNAANSGVRVKQIREINENEAPYRRVYDPSHPEADNEGYVNYPNVNIVEE 122

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +M    R Y AN Q I+ +  +    LD+ R
Sbjct: 123 MINMISATRAYEANAQVIEATKSIAMRALDIGR 155


>gi|83647175|ref|YP_435610.1| flagellar basal body rod protein FlgC [Hahella chejuensis KCTC
           2396]
 gi|83635218|gb|ABC31185.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
           2396]
          Length = 145

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 15/142 (10%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV----------- 54
           +   IA SG+  QS R+   + N+ANA T   +     YR +   F  V           
Sbjct: 5   SIFDIAGSGMTAQSVRLNTTASNLANADTASSSID-QTYRARKPIFAAVHQDALNAAIPP 63

Query: 55  ---MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                 S GV V+ I    ++    + P HP+A+A G V YPNVNV+ E ADM   +R +
Sbjct: 64  SINDDASRGVEVRAIVESDASLERRYQPDHPMADADGYVFYPNVNVVEEMADMMSASRSF 123

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N++ +  +  MM   L + +
Sbjct: 124 QTNVEVLNSAKTMMQRLLTIGQ 145


>gi|295678060|ref|YP_003606584.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1002]
 gi|295437903|gb|ADG17073.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1002]
          Length = 141

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 14/143 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+    +A S ++ QS R+ + + N+ANA +T   P   PY+ K + F   ++  GG
Sbjct: 1   MPSLMNIFGVAGSAMSAQSERLNVTASNLANADST-TGPDGQPYKAKQVIFA--VNPIGG 57

Query: 61  VRVKK-----------IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
            R +            +  D S     +DPG+P A+A+G V  PNV+ + E  +M   +R
Sbjct: 58  ARTRSGQQVGGVRVTGVVDDPSPMKTAYDPGNPAADANGYVTLPNVDPVQEMVNMISASR 117

Query: 110 LYMANLQTIKQSHDMMTTTLDLL 132
            Y AN++T+  +  +M  TL + 
Sbjct: 118 SYQANVETLNTAKTLMLKTLTIG 140


>gi|212634346|ref|YP_002310871.1| flagellar basal body rod protein FlgC [Shewanella piezotolerans
           WP3]
 gi|212555830|gb|ACJ28284.1| Flagellar basal-body rod protein FlgC [Shewanella piezotolerans
           WP3]
          Length = 138

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           L    ++A SG++ QS R+   + NIANA     + G + YR +   FE  M        
Sbjct: 3   LFNIFNVAGSGMSAQSVRLNTTASNIANADAVSSSAG-ETYRARHPIFEAEMSKAQQHQS 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S  V VK I        +EF PGHP+A+  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  ASQSVAVKGIVESDLPLNKEFSPGHPMADTDGFIYKPNVNVMEEMANMISASRSYQMNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+  TL + +
Sbjct: 122 VTDAAKSMLQQTLRIGK 138


>gi|121596115|ref|YP_988011.1| flagellar basal-body rod protein FlgC [Acidovorax sp. JS42]
 gi|222112270|ref|YP_002554534.1| flagellar basal-body rod protein flgc [Acidovorax ebreus TPSY]
 gi|120608195|gb|ABM43935.1| flagellar basal-body rod protein FlgC [Acidovorax sp. JS42]
 gi|221731714|gb|ACM34534.1| flagellar basal-body rod protein FlgC [Acidovorax ebreus TPSY]
          Length = 134

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           + +  +++ S ++ QS R+ +++ N+AN       P    Y+ + + F+    G   + G
Sbjct: 3   MFSIFNVSGSAISAQSQRLNVVASNLANVDAVAG-PDGQAYKARQVVFQTAPMGPESAAG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  I           DP +P+A+A G V + NVN + E  +M   +R Y  N++ +  
Sbjct: 62  VRVSSIQESDQPGRRVHDPANPMADAEGYVTHSNVNAVEEMVNMISASRSYQNNVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 AKTLLLKTLQMGQ 134


>gi|171059414|ref|YP_001791763.1| flagellar basal-body rod protein FlgC [Leptothrix cholodnii SP-6]
 gi|170776859|gb|ACB34998.1| flagellar basal-body rod protein FlgC [Leptothrix cholodnii SP-6]
          Length = 136

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           ++   ++A S ++ QS R+  ++ N+ANA T    P    ++ + + F+ V  G   + G
Sbjct: 3   MLNIFNVAGSAVSAQSQRLNAVATNLANADTVAG-PDGQSFKARQVMFQSVQMGEMGAAG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V +I  DQS      DP HP A+A G V Y NVN + E  +M   +R Y  N++ +  
Sbjct: 62  VKVSQITEDQSPGRRVHDPKHPQADAEGYVTYSNVNAVEEMVNMISASRSYQNNVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 AKTLLLKTLQMGQ 134


>gi|34557980|ref|NP_907795.1| flagellar basal body rod protein FlgC [Wolinella succinogenes DSM
           1740]
 gi|34483698|emb|CAE10695.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGC PROXIMAL ROD PROTEIN
           [Wolinella succinogenes]
          Length = 164

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 33/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-----EVMHGS 58
            ++S  I+  GL+ Q  R+ +IS NIANA TT    G  PYRRK + F+     EV++  
Sbjct: 3   FLSSFDISGYGLSAQRFRVNMISSNIANANTTRTDEGG-PYRRKEVIFKAFDFDEVLNQK 61

Query: 59  GG---------------------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
            G                           V V K+  D S    +++P HP AN+ G V 
Sbjct: 62  LGENNNLLKYEDPLDEDEWGLEPKPSIMSVYVDKVVRDDSQPRMKYEPSHPDANSEGYVA 121

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           YPN+N +VE AD+ E  R Y AN+   + + +M +T L + +
Sbjct: 122 YPNINPVVEMADLIEATRAYQANVSAFQSAKNMASTALTMFQ 163


>gi|157692298|ref|YP_001486760.1| flagellar basal body rod protein FlgC [Bacillus pumilus SAFR-032]
 gi|157681056|gb|ABV62200.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032]
          Length = 150

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 18/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTP---GSDPYRRKTI-------SFEE 53
           + +  + + S L  Q  RM ++S N+AN  TT         +PYRRK +       SF  
Sbjct: 3   IFSGVNASASALTAQRLRMDVVSSNLANMDTTRAKQVDGNWEPYRRKLVTLQPSGESFSS 62

Query: 54  VMHGS--------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           +++ S         GV+  KI  D++ F  ++DP +P AN +G V+ PNV+ L E  D+ 
Sbjct: 63  ILNSSMNSSGKLGNGVKATKITEDETPFNLQYDPTNPDANENGYVQTPNVDPLKEMVDLI 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++R Y AN+  +  +  M+   L++ +
Sbjct: 123 SSSRSYEANVTALNANKSMLMKALEIGK 150


>gi|309779445|ref|ZP_07674206.1| flagellar basal-body rod protein FlgC [Ralstonia sp. 5_7_47FAA]
 gi|308921686|gb|EFP67322.1| flagellar basal-body rod protein FlgC [Ralstonia sp. 5_7_47FAA]
          Length = 135

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 5/134 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           L     +A S L  QS RM +++ N+ANA +    P    YR K + F         + G
Sbjct: 3   LFKVMDVAGSALTAQSKRMNVVASNLANAESV-TGPDGKAYRAKQVVFSPAQESDDYATG 61

Query: 61  VRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           V V ++  D  +       PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++   
Sbjct: 62  VSVDRVVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVAN 121

Query: 120 QSHDMMTTTLDLLR 133
            +  M +  L L +
Sbjct: 122 TTKTMASKALTLGQ 135


>gi|27380924|ref|NP_772453.1| flagellar basal body rod protein FlgC [Bradyrhizobium japonicum
           USDA 110]
 gi|27354090|dbj|BAC51078.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 141

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/133 (45%), Positives = 82/133 (61%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
              S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  +   +V
Sbjct: 8   FARSMAIATSGLRAQAGRMRVISENIANADSTSQTAGGDPYRRKVPTFSSALDRTLDAQV 67

Query: 64  K---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
               +I  DQS F  +++P +P A+A+G VKYPNVN +VE  DMR+  R Y ANL  I  
Sbjct: 68  VTLGRIKPDQSNFRTKYEPNNPAADATGNVKYPNVNSVVEMTDMRDAQRSYEANLNIISA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|71280491|ref|YP_268220.1| flagellar basal-body rod protein FlgC [Colwellia psychrerythraea
           34H]
 gi|71146231|gb|AAZ26704.1| flagellar basal-body rod protein FlgC [Colwellia psychrerythraea
           34H]
          Length = 143

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
           L     I  SG++ QS R+   + NIANA +   +     YR +   F   M        
Sbjct: 3   LFNVFDITGSGMSAQSVRLNTTASNIANADSVSSSAD-KTYRARHPVFAAAMQEAAAGQG 61

Query: 56  --HGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
              GSG GV V  I         E+ P HP+A+  G +  PNVNV+ E  +M   +R Y 
Sbjct: 62  KSDGSGVGVNVLGIVESDKPLNVEYAPSHPMADKDGYIYKPNVNVIEEMTNMISASRSYQ 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N+Q  + + +M+  TL L +
Sbjct: 122 TNVQLAESAKNMLNKTLQLGQ 142


>gi|266621920|ref|ZP_06114855.1| flagellar basal-body rod protein FlgC [Clostridium hathewayi DSM
           13479]
 gi|288866393|gb|EFC98691.1| flagellar basal-body rod protein FlgC [Clostridium hathewayi DSM
           13479]
          Length = 144

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 69/146 (47%), Gaps = 15/146 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS-------FEE 53
           M YL  S +I  S L  +  R  II +N+AN  TT    G  PYRRK ++       F+ 
Sbjct: 1   MGYL-DSLNITGSALTAERFRTDIILQNLANQNTTRTAEGG-PYRRKQVALRENQLDFKS 58

Query: 54  VMHGS------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  +      GGV V+++   Q+  V  +DP HP AN  G V  PNVN   E  D+   
Sbjct: 59  ELGKAMTKADRGGVYVEEVVESQNPLVPVYDPDHPDANEDGYVMMPNVNSAEEMVDLMAA 118

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+  +  +  M    L++ +
Sbjct: 119 TRAYEANVTALNIAKSMALKALEIGK 144


>gi|254419217|ref|ZP_05032941.1| flagellar basal-body rod protein FlgC [Brevundimonas sp. BAL3]
 gi|196185394|gb|EDX80370.1| flagellar basal-body rod protein FlgC [Brevundimonas sp. BAL3]
          Length = 128

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/127 (44%), Positives = 81/127 (63%), Gaps = 1/127 (0%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-VMHGSGGVRVKKI 66
             +A S L  Q +RM++I+ENIANA++T  TPG +PYRR+   F+   + G+ GV + ++
Sbjct: 1   MAVAASALKAQQSRMRVIAENIANAQSTARTPGGEPYRRQIPVFQAREVDGATGVTLAEV 60

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             DQ  F  ++DP HP ANA G V  PNV+ LVE  DMRE  R Y ANL  I+ +  M +
Sbjct: 61  RPDQGEFKMDYDPSHPAANAQGYVMRPNVDTLVEAMDMREAQRAYEANLNVIETARSMDS 120

Query: 127 TTLDLLR 133
            TLD+++
Sbjct: 121 RTLDIIK 127


>gi|251797447|ref|YP_003012178.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. JDR-2]
 gi|247545073|gb|ACT02092.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. JDR-2]
          Length = 151

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 19/138 (13%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSD---PYRRKTISFEEVMH--------------- 56
           L  Q  RM +IS NIANA TT     +    PY+RK +  E +                 
Sbjct: 14  LTAQRLRMDVISSNIANAETTRAGYVNGQFVPYKRKMVVLEPMTQNSSFSDLLNKQLEGT 73

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
            G+ GV+  +I  DQS     ++P HP A+A G V  PNV+V  E  DM   +R Y AN+
Sbjct: 74  SGAQGVKATRIIEDQSPTKLVYNPTHPDADADGYVHMPNVDVAKEMVDMISASRSYEANV 133

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  S  M T  L++ +
Sbjct: 134 TALNASKAMFTKALEIGK 151


>gi|17548564|ref|NP_521904.1| flagellar basal-body rod protein FlgC [Ralstonia solanacearum
           GMI1000]
 gi|300693335|ref|YP_003749308.1| flagellar basal-body rod protein flgc (proximal rod protein)
           [Ralstonia solanacearum PSI07]
 gi|17430812|emb|CAD17494.1| probable flagellar basal-body rod protein flgc [Ralstonia
           solanacearum GMI1000]
 gi|299075372|emb|CBJ34667.1| Flagellar basal-body rod protein flgC (proximal rod protein)
           [Ralstonia solanacearum PSI07]
          Length = 135

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 5/134 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---G 60
           L     +A S L  QS RM +++ N+ANA +    P    YR K + F       G   G
Sbjct: 3   LFKVMDVAGSALTAQSKRMNVVASNLANAESV-TGPDGTAYRAKQVVFSPEQETDGYATG 61

Query: 61  VRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           V V ++  D  +       PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++   
Sbjct: 62  VSVDRVVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVAN 121

Query: 120 QSHDMMTTTLDLLR 133
            +  M    L L +
Sbjct: 122 TTKTMAAKALTLGQ 135


>gi|23092313|gb|AAN08638.1| FlgC [Aeromonas hydrophila]
          Length = 139

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           L     IA S ++ QS R+  ++ N+ANA +   +   + Y  +   F   +        
Sbjct: 3   LFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSV-ENTYHARRPIFAAQLDQAMSDKQ 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV VK I   ++  ++E++PGHP+A+  G +  PNVN++ E ADM   +R Y  N+Q
Sbjct: 62  ASVGVEVKGIVESEAPLLKEYNPGHPMADKDGFIFKPNVNMVEEMADMTNASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+  TL L +
Sbjct: 122 VADSAKKMLQQTLQLGK 138


>gi|254458686|ref|ZP_05072110.1| flagellar basal-body rod protein FlgC [Campylobacterales bacterium
           GD 1]
 gi|207084452|gb|EDZ61740.1| flagellar basal-body rod protein FlgC [Campylobacterales bacterium
           GD 1]
          Length = 163

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M +L +S  I+  GL+ Q  R+  IS+NIANA+TT    G  PYRRK + F+ +      
Sbjct: 1   MSFL-SSFDISGYGLSAQRVRVNTISQNIANAQTTRTEEGG-PYRRKEVVFKAIDFNEQF 58

Query: 60  -------------------------------GVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V KI  D S    +FDP HP A+A+G
Sbjct: 59  NKAIGKMTDSAKFEDPLNEGDFGKKVNPAIMSVIVDKISRDDSEPKMKFDPSHPDADANG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N ++E AD+ E  R Y AN+   + S +M  + + LL+
Sbjct: 119 YVAYPNINPVIEMADLVEATRSYQANVAAFESSKNMANSAISLLQ 163


>gi|292669734|ref|ZP_06603160.1| flagellar basal-body rod protein FlgC [Selenomonas noxia ATCC
           43541]
 gi|292648531|gb|EFF66503.1| flagellar basal-body rod protein FlgC [Selenomonas noxia ATCC
           43541]
          Length = 151

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 69/147 (46%), Gaps = 19/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +      A SGL  +  RM +IS NIANA TT    G   Y R+ + F+    G+G    
Sbjct: 3   MFLGIDAAASGLTAERLRMDVISNNIANANTTR-AQGGGAYHRRYVVFQPREKGNGIGFE 61

Query: 60  --------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GVR   I  D+S     ++PGHP ANA G V+ PNVN++ E  DM 
Sbjct: 62  SFLARASDRLRPGDGVRAVSIETDRSQGTLVYEPGHPDANADGYVERPNVNIVAEMVDMI 121

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLL 132
             +R Y AN  TI  +  M+T  L + 
Sbjct: 122 SASRGYEANATTINAAKSMVTAALRIG 148


>gi|319764537|ref|YP_004128474.1| flagellar basal-body rod protein flgc [Alicycliphilus denitrificans
           BC]
 gi|330826753|ref|YP_004390056.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
           K601]
 gi|317119098|gb|ADV01587.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
           BC]
 gi|329312125|gb|AEB86540.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
           K601]
          Length = 134

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           + +  +++ S ++ QS R+ +++ N+AN       P    Y+ + + F+        S G
Sbjct: 3   MFSIFNVSGSAISAQSQRLNVVASNLANVDAVAG-PDGQAYKARQVVFQTAPMGPDSSAG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  I           DP +P+A+A G V + NVN + E  +M   +R Y  N++ +  
Sbjct: 62  VRVSTIQESGVPGRRVHDPSNPMADAEGYVTHSNVNAVEEMVNMISASRSYQNNVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 AKSLLLKTLQMGQ 134


>gi|229826300|ref|ZP_04452369.1| hypothetical protein GCWU000182_01672 [Abiotrophia defectiva ATCC
           49176]
 gi|229789170|gb|EEP25284.1| hypothetical protein GCWU000182_01672 [Abiotrophia defectiva ATCC
           49176]
          Length = 147

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 15/143 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           +  +  I+ +G+  Q  R  +I++NIAN  TT D  G + YRRK + F E          
Sbjct: 3   IFGAMDISATGMTAQQLRTDVIAQNIANINTTRDQNG-NVYRRKNVVFTEKDVTGFSQIL 61

Query: 54  ---VMHGSGGVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                    GV+V  I  D  S     +DP HP AN  G V YPNVN + E  DM +  R
Sbjct: 62  LRTAGRVGNGVKVTSIYSDTKSPVRLVYDPSHPDANEDGYVTYPNVNTVQEMTDMIDATR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLL 132
            Y AN+     + +M+   L++ 
Sbjct: 122 SYEANVTAFNATKNMILKALEMG 144


>gi|296534150|ref|ZP_06896646.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
 gi|296265526|gb|EFH11655.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
          Length = 136

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/136 (44%), Positives = 91/136 (66%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  +  ++ SG++ QSAR+++++EN+AN  +TG+TPG++PYRRKT++F   +  + G
Sbjct: 1   MD-LERALSVSASGMSAQSARLRVVAENVANRDSTGETPGAEPYRRKTVTFANRLDRALG 59

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              VRV +IG     F E++DP HP A+A G V+ PNV+ +VE  DMRE  R Y ANL  
Sbjct: 60  AETVRVARIGTAAGNFPEQYDPQHPAADARGYVRKPNVDSMVEMMDMREAQRSYSANLSV 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  M+   +DLLR
Sbjct: 120 LETTRAMIQRAIDLLR 135


>gi|291484170|dbj|BAI85245.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           natto BEST195]
          Length = 150

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 18/147 (12%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTP---GSDPYRRKTIS-------FEEV 54
             S +++ S L  Q  RM ++S N+AN  TT          PYRRK +S       F  +
Sbjct: 4   FHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESFSSI 63

Query: 55  MH--------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           ++           GV+V KI  D S F   +DP  P ANA G V+ PNV+ L E  D+  
Sbjct: 64  LNSQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDANADGYVQKPNVDPLKEMVDLVS 123

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + R Y AN+  +  +  M+   L++ +
Sbjct: 124 STRSYEANVTAMNATKGMLMKALEIGK 150


>gi|331006032|ref|ZP_08329374.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
 gi|330420161|gb|EGG94485.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
          Length = 140

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 10/139 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
           L +   IA SG+  QS R+   + N+ANA     +   + YR +   F  +         
Sbjct: 3   LDSVFSIAGSGMNAQSLRLNTTASNLANADAAASSID-ETYRGRHPVFASLKDTLSMDSN 61

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
            + S GV V  I    +     ++PGHP++N  G V YPNVNV+ E  +M   +R +  N
Sbjct: 62  GNASVGVGVLGIVESDAPLQPRYEPGHPLSNEEGYVFYPNVNVVEEMTNMISASRSFQIN 121

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ +  +  MM   L L +
Sbjct: 122 VEVMNSAKQMMQRALTLGK 140


>gi|16078682|ref|NP_389501.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221309494|ref|ZP_03591341.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313819|ref|ZP_03595624.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318743|ref|ZP_03600037.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323014|ref|ZP_03604308.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321315385|ref|YP_004207672.1| flagellar basal body rod protein FlgC [Bacillus subtilis BSn5]
 gi|120294|sp|P24501|FLGC_BACSU RecName: Full=Flagellar basal-body rod protein flgC
 gi|142916|gb|AAA22442.1| flgC [Bacillus subtilis]
 gi|2633991|emb|CAB13492.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|320021659|gb|ADV96645.1| flagellar basal body rod protein FlgC [Bacillus subtilis BSn5]
          Length = 150

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 18/147 (12%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTP---GSDPYRRKTIS-------FEEV 54
             S +++ S L  Q  RM ++S N+AN  TT          PYRRK +S       F  +
Sbjct: 4   FHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESFSSI 63

Query: 55  MH--------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           ++           GV+V KI  D S F   +DP  P ANA G V+ PNV+ L E  D+  
Sbjct: 64  LNSQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDANAEGYVQKPNVDPLKEMVDLVS 123

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + R Y AN+  +  +  M+   L++ +
Sbjct: 124 STRSYEANVTAMNATKGMLMKALEIGK 150


>gi|78776565|ref|YP_392880.1| flagellar basal body rod protein FlgC [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497105|gb|ABB43645.1| Flagellar basal-body rod protein FlgC [Sulfurimonas denitrificans
           DSM 1251]
          Length = 164

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 33/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           M   + S  I+  GL+ Q  R+  IS+NIANA+TT    G  PYRRK + F+        
Sbjct: 1   MSNFLNSFDISGYGLSAQRVRVNTISQNIANAQTTRTDEGG-PYRRKEVVFKAIDFNQEF 59

Query: 54  -------------------------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                    V      V V KI  D     +++DP HP A+A+G
Sbjct: 60  NKALNGMTESAKYEDPLDEGDFGKRVNPAIMSVVVDKISRDDKEPQKKYDPAHPDADANG 119

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N ++E AD+ E  R Y AN+   + S  +  + + LL+
Sbjct: 120 YVAYPNINPVIEMADLVEATRSYQANVAAFESSKSIANSAISLLQ 164


>gi|194015045|ref|ZP_03053662.1| flagellar basal-body rod protein FlgC [Bacillus pumilus ATCC 7061]
 gi|194014071|gb|EDW23636.1| flagellar basal-body rod protein FlgC [Bacillus pumilus ATCC 7061]
          Length = 150

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 18/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTP---GSDPYRRKTI-------SFEE 53
           + +  + + S L  Q  RM ++S N+AN  TT         +PYRRK +       SF  
Sbjct: 3   IFSGVNASASALTAQRLRMDVVSSNLANMDTTRAKQVDGNWEPYRRKLVTLQPSGESFSS 62

Query: 54  VMHGS--------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           +++ +         GV+  KI  D++ F  ++DP +P AN +G V+ PNV+ L E  D+ 
Sbjct: 63  ILNSNMNSSGKLGNGVKATKITEDETPFNLQYDPTNPDANENGYVQTPNVDPLKEMVDLI 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++R Y AN+  +  +  M+   L++ +
Sbjct: 123 SSSRSYEANVTALNANKSMLMKALEIGK 150


>gi|114765223|ref|ZP_01444355.1| flagellar basal-body rod protein C [Pelagibaca bermudensis
           HTCC2601]
 gi|114542358|gb|EAU45386.1| flagellar basal-body rod protein C [Roseovarius sp. HTCC2601]
          Length = 136

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/136 (41%), Positives = 82/136 (60%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L     +A SG+  Q  R++++SEN+ANA +TG++ G DPYRRK ISF+E++    G
Sbjct: 1   MDTLKTVLSVAASGMRAQGERLKVVSENVANASSTGNSNGEDPYRRKIISFQEMVDRDSG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V  +  D + F   +DP HP A+  G VK  NVN ++E ++MRE +R Y ANL  
Sbjct: 61  ASMVEVDGVRRDDADFQLNYDPSHPAADEDGFVKVSNVNTILEMSNMREASRSYQANLNM 120

Query: 118 IKQSHDMMTTTLDLLR 133
            +    M +  LDLL+
Sbjct: 121 FETGRSMRSQLLDLLK 136


>gi|238927420|ref|ZP_04659180.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
 gi|238884702|gb|EEQ48340.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
          Length = 151

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 51/147 (34%), Positives = 69/147 (46%), Gaps = 19/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +      A SGL  +  RM +IS NIANA TT  T G   Y R+ + F+    G+G    
Sbjct: 3   MFLGIDAAASGLTAERLRMDVISNNIANANTTR-TQGGGAYHRRYVVFQPREKGTGIGFE 61

Query: 60  --------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GVR   I  D +     ++PGHP ANA G V+ PNVN++ E  DM 
Sbjct: 62  SFLARASNRLRPGDGVRAVSIQADNTQGPLVYEPGHPDANADGYVERPNVNIVAEMVDMI 121

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLL 132
             +R Y AN  TI  +  M++  L + 
Sbjct: 122 SASRGYEANTTTINAAKSMVSAALRIG 148


>gi|289548424|ref|YP_003473412.1| flagellar basal-body rod protein FlgC [Thermocrinis albus DSM
           14484]
 gi|289182041|gb|ADC89285.1| flagellar basal-body rod protein FlgC [Thermocrinis albus DSM
           14484]
          Length = 137

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 8/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M  +     ++ SG+  Q  R+ +I+ N+AN  +   T   +PYRR    FE V      
Sbjct: 1   MMEVFKVFEVSASGMYAQRVRINVIASNLANYES--YTREGEPYRRLEPVFEAVETPGNL 58

Query: 60  -----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                 VRV +I    + F   FDP +P A+  G V+ PNV+V  E  DM    R Y AN
Sbjct: 59  SKGLVPVRVVEIRRSDAPFRLLFDPTNPRADRDGFVRLPNVDVTAEMVDMLSALRSYEAN 118

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L     + +++  TL+L R
Sbjct: 119 LTAFNATKEIVQRTLELWR 137


>gi|262276419|ref|ZP_06054228.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
 gi|262220227|gb|EEY71543.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
          Length = 136

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 6/135 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-----GS 58
           L    ++  S ++ +S R+   S N+ANA +   +  ++ Y+ +   F   ++      S
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSS-AAETYKARHPVFAAELNRFQQGAS 61

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+VK I   Q     E++P HP+ANA G +  PNVNV+ E A+M   +R Y  N++  
Sbjct: 62  VPVQVKGIVESQKPLRAEYNPEHPMANADGYIYKPNVNVMEEMANMISASRSYQTNVEVA 121

Query: 119 KQSHDMMTTTLDLLR 133
           + S  M+  TL + +
Sbjct: 122 EASKQMLMRTLQMGK 136


>gi|296330833|ref|ZP_06873308.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674351|ref|YP_003866023.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296151838|gb|EFG92712.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412595|gb|ADM37714.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 150

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 18/147 (12%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTIS-------FEEV 54
             S +++ S L  Q  RM ++S N+AN  TT     +    PYRRK +S       F  +
Sbjct: 4   FHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWMPYRRKMVSLQSKGESFSSI 63

Query: 55  MH--------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           ++           GV+V KI  D S F   +DP  P ANA G V+ PNV+ L E  D+  
Sbjct: 64  LNSQMSGSGNAGNGVKVSKITEDDSEFNLVYDPTDPDANAEGYVQKPNVDPLKEMVDLVS 123

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + R Y AN+  +  +  M+   L++ +
Sbjct: 124 STRSYEANVTAMNATKGMLMKALEIGK 150


>gi|323139652|ref|ZP_08074694.1| flagellar basal-body rod protein FlgC [Methylocystis sp. ATCC
           49242]
 gi|322395084|gb|EFX97643.1| flagellar basal-body rod protein FlgC [Methylocystis sp. ATCC
           49242]
          Length = 139

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 77/135 (57%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L AS  +A +GLA QSAR++I+SEN+ANA++TG+TPG+DPY RKTISF   +  + GV
Sbjct: 3   DPLDASLKVAGAGLAAQSARLRIVSENMANAQSTGNTPGADPYVRKTISFANELDRASGV 62

Query: 62  R---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           R   V +IGVD + F  E DPG+P A+A+G VK PNVN+LVE  DMRE NR Y A+LQ +
Sbjct: 63  RLVRVNQIGVDPTPFTIEHDPGNPAADANGDVKRPNVNLLVEMGDMREANRAYEADLQVM 122

Query: 119 KQSHDMMTTTLDLLR 133
           KQS D++  T+DLL+
Sbjct: 123 KQSRDLIAMTVDLLK 137


>gi|327480018|gb|AEA83328.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri DSM
           4166]
          Length = 147

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L +  +IA SG++ QS R+  IS NIANA T   +     YR +   F  V   + G   
Sbjct: 3   LSSVFNIAGSGMSAQSTRLNTISSNIANAETVSSSVD-QTYRARHPVFATVFQQANGQPD 61

Query: 64  KKI----------------GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           + +                  DQS     ++P HP A+ +G V YPNVNV+ E ADM   
Sbjct: 62  QSLFAGQDQAGVGVQVLGVVEDQSELQARYEPNHPAADEAGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N + +  +  M+   L L +
Sbjct: 122 SRAFQTNAELMNTAKTMLQKVLTLGQ 147


>gi|209545549|ref|YP_002277778.1| flagellar basal body rod protein FlgC [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209533226|gb|ACI53163.1| flagellar basal-body rod protein FlgC [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 135

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/136 (42%), Positives = 86/136 (63%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  ++ +G+  Q  R+++ +EN+AN  TTG T G+DPYRRKTI+F+  +  + G
Sbjct: 1   MDF-SDTIGVSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASG 59

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   +VK IG D + F  ++DP HP A+A G VK PNVN +VE  D  E    Y ANL T
Sbjct: 60  VSSVKVKGIGQDNTPFQTKYDPSHPAADAKGYVKMPNVNSMVEIMDTHEAQHSYEANLNT 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ S  M T T++L++
Sbjct: 120 MQISRSMATRTINLIK 135


>gi|89895737|ref|YP_519224.1| hypothetical protein DSY2991 [Desulfitobacterium hafniense Y51]
 gi|89335185|dbj|BAE84780.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 176

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 43/173 (24%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSD--PYRRKTISFEE----- 53
           +  S  I+ SGL  Q  R+ +IS NIAN  TT     T G +  PY+R+ + F+      
Sbjct: 3   IFGSMDISASGLTAQRLRLDVISNNIANINTTRTGQLTEGGNQIPYQRQVVVFKARGTES 62

Query: 54  --------VMHG------------------SGGVRVKKIGVDQSTFVEEFDPGHPVA--- 84
                    + G                    GV V+ I  D   F  E++P  P A   
Sbjct: 63  SFAETLNQALQGRSVSTTALLQGQTTLGTTGNGVEVQAIAEDTLPFRLEYNPDSPDAAQT 122

Query: 85  ----NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 +G V+ PNVN++ E  DM   +R Y AN+  +  S  MMT  L++ +
Sbjct: 123 TEDGIPAGYVRMPNVNIVTEMVDMISASRAYEANVTALNASKAMMTKALEIGK 175


>gi|291277450|ref|YP_003517222.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
 gi|290964644|emb|CBG40498.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
          Length = 164

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 33/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
            ++S  I+  GL+ Q  R  IIS NIANA TT    G  PYRR+ + F+           
Sbjct: 3   FLSSFDISGYGLSAQRFRTNIISSNIANANTTRTDEGG-PYRRQEVVFKAFDFNKILNEK 61

Query: 56  ------------------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
                                        V V K+  D    + ++DP HP ANA G V 
Sbjct: 62  IAKENENLAYEDPLDEKEFGKLPKPAIMSVYVDKVVRDDREPLMKYDPSHPDANADGYVA 121

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           YPNVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 YPNVNPVVEMADLIEATRAYQANVAAFQSAKNMANNAITMLQ 163


>gi|269836584|ref|YP_003318812.1| flagellar basal-body rod protein FlgC [Sphaerobacter thermophilus
           DSM 20745]
 gi|269785847|gb|ACZ37990.1| flagellar basal-body rod protein FlgC [Sphaerobacter thermophilus
           DSM 20745]
          Length = 154

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 23/152 (15%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
           +  +  ++ SGL  Q  RM +I+ NIAN  TT  TP   PYRR+ + F  V         
Sbjct: 3   IFETMRVSMSGLTAQRLRMDVIASNIANVDTTR-TPEGGPYRRRQVVFTAVPATDSRPSA 61

Query: 56  --------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                         +   GV V  I  D       ++P HP A+  G V  P+++V+ E 
Sbjct: 62  GGFQRVLAPVDPQSNAGQGVAVTAIRTDPDAVRRVYEPDHPDADEEGFVLRPDIDVITEM 121

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D+   +R Y AN+  +     M +  L + R
Sbjct: 122 TDLLAASRAYEANVTVLNAVKAMASRALTIGR 153


>gi|323527715|ref|YP_004229868.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1001]
 gi|323384717|gb|ADX56808.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1001]
          Length = 141

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 14/143 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+    +A S ++ QS R+ + + N+ANA +T   P   PYR K + F       GG
Sbjct: 1   MPSLMNIFGVAGSAMSAQSQRLNVTASNLANADST-TGPDGQPYRAKQVVFAVAP--LGG 57

Query: 61  VRVKKIG-----------VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
            R                 D +     +DPG+P ANA G V  PNV+ + E  +M   +R
Sbjct: 58  ARTASGQQVGGVQVTGVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASR 117

Query: 110 LYMANLQTIKQSHDMMTTTLDLL 132
            Y AN++T+  +  +M  TL + 
Sbjct: 118 SYQANVETLNTAKTLMLKTLTIG 140


>gi|91785636|ref|YP_560842.1| flagellar basal body rod protein FlgC [Burkholderia xenovorans
           LB400]
 gi|296157458|ref|ZP_06840293.1| flagellar basal-body rod protein FlgC [Burkholderia sp. Ch1-1]
 gi|91689590|gb|ABE32790.1| Flagellar basal-body rod protein FlgC [Burkholderia xenovorans
           LB400]
 gi|295892230|gb|EFG72013.1| flagellar basal-body rod protein FlgC [Burkholderia sp. Ch1-1]
          Length = 141

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 14/143 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+    +A S ++ QS R+ + + N+ANA +T   P   PY+ K + F   +   GG
Sbjct: 1   MPSLMNIFGVAGSAMSAQSQRLNVTASNLANADST-TGPDGQPYKAKQVVFA--VSPLGG 57

Query: 61  VRVKKIG-----------VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
            R                 D +     +DPG+P ANA G V  PNV+ + E  +M   +R
Sbjct: 58  ARTASGQQVGGVQVTGVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASR 117

Query: 110 LYMANLQTIKQSHDMMTTTLDLL 132
            Y AN++T+  +  +M  TL + 
Sbjct: 118 SYQANVETLNTAKTLMLKTLTIG 140


>gi|192362305|ref|YP_001982402.1| flagellar basal body rod protein FlgC [Cellvibrio japonicus
           Ueda107]
 gi|190688470|gb|ACE86148.1| flagellar basal-body rod protein FlgC [Cellvibrio japonicus
           Ueda107]
          Length = 148

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 18/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
           L     IA +G+  QS R+   + N+ANA++   +   + YR +   F  +         
Sbjct: 3   LGTIFDIAGTGMNAQSLRLNTTASNLANAQSASSSVD-EVYRSRQPVFAAIAQQAMGNLN 61

Query: 55  --------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                   +  + GV+V  I    +     ++PGHP A+A G V YPNVN + E A+M  
Sbjct: 62  GAGYSQNELDANAGVQVLGIVESDAPLQRRYEPGHPKADADGYVFYPNVNPVEEMANMIS 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N++ +  +  M+   L L +
Sbjct: 122 ASRSFQMNVEVMNSAKQMVQRVLTLGQ 148


>gi|187925763|ref|YP_001897405.1| flagellar basal body rod protein FlgC [Burkholderia phytofirmans
           PsJN]
 gi|187716957|gb|ACD18181.1| flagellar basal-body rod protein FlgC [Burkholderia phytofirmans
           PsJN]
          Length = 141

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 14/143 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+    +A S ++ QS R+ + + N+ANA +T   P   PY+ K + F   +   GG
Sbjct: 1   MPSLMNIFGVAGSAMSAQSQRLNVTASNLANADST-TGPDGQPYKAKQVVFA--VSPLGG 57

Query: 61  VRVKKIG-----------VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
            R                 D +     +DPG+P AN+ G V  PNV+ + E  +M   +R
Sbjct: 58  ARTASGQQVGGVQVTGVVDDPTPMKTAYDPGNPAANSDGYVTLPNVDPVQEMVNMISASR 117

Query: 110 LYMANLQTIKQSHDMMTTTLDLL 132
            Y AN++T+  +  +M  TL + 
Sbjct: 118 SYQANVETLNTAKTLMLKTLTIG 140


>gi|224437870|ref|ZP_03658817.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
           18818]
 gi|313144319|ref|ZP_07806512.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
           18818]
 gi|313129350|gb|EFR46967.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
           18818]
          Length = 163

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 33/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
            ++S  I+  GL+ Q  R+  IS NIANA TT    G  PYRR+ + F            
Sbjct: 2   FLSSFDISGYGLSAQRVRVNTISSNIANANTTRTDEGG-PYRRREVVFRAFDFNKILNEK 60

Query: 52  --------------------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
                               +E       V ++KI  D    + ++DP HP AN+ G V 
Sbjct: 61  LGKNNQQLKYEDPLNEGDLGKEPKPAIMSVYIQKIVRDDREPLMKYDPSHPDANSEGYVA 120

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           YPNVN +VE AD+ E  R Y AN+   + + +M +  + + +
Sbjct: 121 YPNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAITMFQ 162


>gi|326796599|ref|YP_004314419.1| flagellar basal-body rod protein FlgC [Marinomonas mediterranea
           MMB-1]
 gi|326547363|gb|ADZ92583.1| flagellar basal-body rod protein FlgC [Marinomonas mediterranea
           MMB-1]
          Length = 149

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 18/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
           L     I+ S ++ Q+ R+  ++ NIAN  +   +   + YR +   F E+M        
Sbjct: 3   LNNIFAISGSAMSAQTIRLNTVASNIANVDSVASSVD-ETYRARKPVFAEMMEESMRERG 61

Query: 56  ---------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV+V  I    +     ++P HP++N  G V YPNVN + E ADM  
Sbjct: 62  WRDVSDDDLQSGVGVQVAGIVESDAPLQPRYEPDHPMSNEEGYVFYPNVNPVEEMADMMS 121

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N++ +  +  MM   L L +
Sbjct: 122 ASRSFQTNVEVMNSAKSMMQKMLSLGQ 148


>gi|307546970|ref|YP_003899449.1| flagellar basal body rod protein FlgC [Halomonas elongata DSM 2581]
 gi|307218994|emb|CBV44264.1| flagellar basal body rod protein FlgC [Halomonas elongata DSM 2581]
          Length = 135

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 4/132 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
           + +   I+ S ++ QS RM + + N+ANA +    P  + YR K + FE         GG
Sbjct: 3   MFSVFEISGSAMSAQSQRMNVTASNLANADSVAG-PDGEAYRAKQVLFETRAQSRTGVGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V+++  D S    ++ P HP+A+  G V  PNV+   E  +M   +R Y AN++ +  
Sbjct: 62  VGVREVIEDPSPMRRQYRPEHPLADDQGYVDMPNVDPAAEMVNMISASRSYQANVEVMDT 121

Query: 121 SHDMMTTTLDLL 132
           +  ++  TL + 
Sbjct: 122 NKQLLLKTLSMG 133


>gi|307731365|ref|YP_003908589.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1003]
 gi|307585900|gb|ADN59298.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1003]
          Length = 141

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 10/141 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M  L+    +A S ++ QS R+ + + N+ANA +T   P   PY+ K + F     G   
Sbjct: 1   MPSLMNIFGVAGSAMSAQSQRLNVTASNLANADST-TGPDGQPYKAKQVVFAVAPLGGAR 59

Query: 60  --------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV+V  +  D +     +DPG+P ANA G V  PNV+ + E  +M   +R Y
Sbjct: 60  TGSGQQVGGVQVTGVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN++T+  +  +M  TL + 
Sbjct: 120 QANVETLNTAKTLMLKTLTIG 140


>gi|162147439|ref|YP_001601900.1| flagellar basal body rod protein FlgC [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786016|emb|CAP55598.1| putative flagellar basal-body rod protein flgC [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 135

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 58/136 (42%), Positives = 87/136 (63%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  ++ +G+  Q  R+++ +EN+AN  TTG T G+DPYRRKTI+F+  +  + G
Sbjct: 1   MDF-SDTIGVSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASG 59

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   +VK IG D + F  ++DP HP A+A+G VK PNVN +VE  D  E    Y ANL T
Sbjct: 60  VSSVKVKGIGQDNTPFQTKYDPSHPAADANGYVKMPNVNSMVEIMDTHEAQHSYEANLNT 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ S  M T T++L++
Sbjct: 120 MQISRSMATRTINLIK 135


>gi|304310785|ref|YP_003810383.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium HdN1]
 gi|301796518|emb|CBL44726.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium HdN1]
          Length = 145

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 15/144 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L +   IA SG++ Q+ R+   S NIANA +   +     YR +   F      +     
Sbjct: 3   LSSVFDIAGSGMSAQTVRLNTTSSNIANAESVASSVD-KTYRARHPVFMAQYTAALGNRP 61

Query: 59  ---------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV V  I   Q+     ++P HP A+  G V YPNVNV+ E  +M   +R
Sbjct: 62  TDPLTGKANAGVDVVGIVESQAPLQLRYEPDHPYADEKGYVAYPNVNVVEEMTNMISASR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            +  N   +  +  M++  L+L +
Sbjct: 122 SFQTNADVMNSAKQMLSAVLNLGQ 145


>gi|268680292|ref|YP_003304723.1| flagellar basal-body rod protein FlgC [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618323|gb|ACZ12688.1| flagellar basal-body rod protein FlgC [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 163

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M YL +S  I++ GL+ Q  RM +IS NIANA TT  + G  PY+RK + F+ V      
Sbjct: 1   MAYL-SSFDISSYGLSAQRFRMDLISSNIANANTTRTSEGG-PYQRKDVVFKAVDFSKTL 58

Query: 56  ---------------------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V K+  D+S F  +++P HP AN  G
Sbjct: 59  NEKIAENNNMLEYENPLDDAFLQENANPAIMSVVVDKVVRDESEFTYKYEPSHPDANEEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N ++E A++ E  R Y AN+   + +  +  + +D+L+
Sbjct: 119 YVAYPNINPVIEMANLIEATRAYQANVSAFQSAKAIAQSAIDILK 163


>gi|291529042|emb|CBK94628.1| flagellar basal-body rod protein FlgC [Eubacterium rectale M104/1]
          Length = 146

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L  + +I+ SG+  +  R  II++NIAN  TT  T G  PYRRK ++F E          
Sbjct: 3   LFQAFNISASGMTAERFRTDIIAQNIANVNTT-STKGGTPYRRKIVTFSEKNVTPFSQIY 61

Query: 58  --------SGGVRVKKIGVDQS-TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GV+V  +  D S  F++E+DP +P A+A G V YPNVN + E  ++ +  
Sbjct: 62  SSSKKAAVGNGVKVSSVTSDYSTDFIKEYDPSNPDADADGYVSYPNVNTVTEMTNLIDAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN    + S  M    L + +
Sbjct: 122 RAYEANATAFEASKSMAQNGLQIGK 146


>gi|187926956|ref|YP_001893301.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12J]
 gi|241665285|ref|YP_002983644.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12D]
 gi|187728710|gb|ACD29874.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12J]
 gi|240867312|gb|ACS64972.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12D]
          Length = 135

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 5/134 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHGSGG 60
           L     +A S L  QS RM +++ N+ANA +    P    YR K + F   +E    + G
Sbjct: 3   LFKVMDVAGSALTAQSKRMNVVASNLANAESV-TGPNGTAYRAKQVVFTPVQESDDYATG 61

Query: 61  VRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           V V ++  D  +       PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++   
Sbjct: 62  VSVDRVVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVAN 121

Query: 120 QSHDMMTTTLDLLR 133
            +  M    L L +
Sbjct: 122 TTKTMAAKALTLGQ 135


>gi|119899029|ref|YP_934242.1| flagellar basal-body rod protein FlgC [Azoarcus sp. BH72]
 gi|119671442|emb|CAL95355.1| flagellar basal-body rod protein FlgC [Azoarcus sp. BH72]
          Length = 146

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           ++    IA S L  QS R+   + N+ANA +        PYR K + F     G+     
Sbjct: 3   MLNVFQIAGSALNAQSLRLNTTASNLANADSVI-AEDGQPYRAKQVVFAAKPVGATPPVG 61

Query: 60  -----------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GV+V ++    +     ++P +P ANA G V+ PNVNV+ E  +M   +
Sbjct: 62  GVRDKGAAASVGVQVTQVVESAAPMRLVYEPHNPAANAEGYVEMPNVNVVEEMVNMISAS 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y  N + +  +  ++  TL + +
Sbjct: 122 RSYQNNAEVMNTAQTLLQRTLQIGQ 146


>gi|241766918|ref|ZP_04764724.1| flagellar basal-body rod protein FlgC [Acidovorax delafieldii 2AN]
 gi|241362622|gb|EER58470.1| flagellar basal-body rod protein FlgC [Acidovorax delafieldii 2AN]
          Length = 134

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           + +   ++ S ++ QS R+ +++ N+AN       P    Y+ + + F+        S G
Sbjct: 3   MFSIFSVSGSAISAQSQRLNVVASNLANVDAVAG-PDGQAYKARQVVFQTAPMGADSSAG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  I  + +      DP HP A+A G V + NVN + E  +M   +R Y  N++ +  
Sbjct: 62  VRVSAISENNTPGRRIHDPSHPSADAQGYVTHSNVNAVDEMVNMISASRSYQNNVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 AKSLLLKTLQMGQ 134


>gi|301168115|emb|CBW27701.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
          Length = 146

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 16/148 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           MD L+ S  I++SGLA    RM  IS NIANA+TT    G  PYRRK + F         
Sbjct: 1   MD-LLTSLKISSSGLAANKKRMASISSNIANAQTTRTAEGG-PYRRKEVVFGSEPARETF 58

Query: 52  EEVMHGSGG-----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            E++ G  G     V+  ++       + +++P HP AN  G V YP++NV+ E A+M  
Sbjct: 59  SEILEGELGEKAQTVQATEVISTNRPPILKYEPNHPDANDQGYVAYPDINVMEEMANMIS 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            +R Y AN+  +  + +M    L+L R+
Sbjct: 119 ASRAYEANINAMNTTKNMAMKALELGRN 146


>gi|313905141|ref|ZP_07838510.1| flagellar basal-body rod protein FlgC [Eubacterium cellulosolvens
           6]
 gi|313470044|gb|EFR65377.1| flagellar basal-body rod protein FlgC [Eubacterium cellulosolvens
           6]
          Length = 151

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 48/153 (31%), Positives = 67/153 (43%), Gaps = 22/153 (14%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---------F 51
           M +L  S  I+ SG++ Q  R+ I +ENIAN  TT  T    PY RK +          F
Sbjct: 1   MSFL-DSFDISASGMSAQRIRLDIAAENIANVDTTR-TENGGPYIRKDVVLASYGKKTTF 58

Query: 52  EEVMH-----------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
              +            G  GVRV  I  D       ++P HP A+ +G V+ PNV+V  E
Sbjct: 59  ANALRAARTGSSVISTGKRGVRVAGITDDTRETKRVYNPTHPDADVNGYVEMPNVDVTKE 118

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           T D     R Y AN+  +     M    +D+ +
Sbjct: 119 TVDAMSATRSYEANVTALNAIKMMTQKAMDIGK 151


>gi|254292929|ref|YP_003058952.1| flagellar basal-body rod protein FlgC [Hirschia baltica ATCC 49814]
 gi|254041460|gb|ACT58255.1| flagellar basal-body rod protein FlgC [Hirschia baltica ATCC 49814]
          Length = 138

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 57/133 (42%), Positives = 84/133 (63%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L+++   A SGL  Q+ R+++ +EN+ANA +TGDTPG+DPY+RK   F+  +    G   
Sbjct: 5   LMSAMSSAASGLRAQTVRIRVSAENLANANSTGDTPGADPYQRKVPVFKNYLDRESGAER 64

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +  D + F  +FDP HP A+  G+VKY NV+ LVE  DMRE  R Y ANL  ++ 
Sbjct: 65  VKVSGVHNDTAPFTVKFDPTHPAADEGGMVKYSNVSALVEMTDMREAQRAYEANLNVVEA 124

Query: 121 SHDMMTTTLDLLR 133
           S  M+   +D+L+
Sbjct: 125 SRSMLLAAVDILK 137


>gi|91976172|ref|YP_568831.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisB5]
 gi|91682628|gb|ABE38930.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisB5]
          Length = 141

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
              S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  S   R 
Sbjct: 8   FARSMGIATSGLRAQAGRMRVISENIANAESTAQTAGGDPYRRKVPTFTSALDRSLDART 67

Query: 64  KKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +G    D S F  +++P +P A+A+G VKYPNVN ++E  DMR   R Y ANL  I  
Sbjct: 68  VALGRVKPDTSAFRVKYEPTNPSADAAGNVKYPNVNSVIEMTDMRNAQRSYEANLNVISA 127

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD+L+
Sbjct: 128 TRRMIQRTLDILK 140


>gi|42526722|ref|NP_971820.1| flagellar basal body rod protein FlgC [Treponema denticola ATCC
           35405]
 gi|41817037|gb|AAS11731.1| flagellar basal-body rod protein FlgC [Treponema denticola ATCC
           35405]
          Length = 151

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L  S +IA +G+ V+  R  +IS NIANA +     G  P++R  +              
Sbjct: 3   LFTSINIAATGMGVERLRTDVISNNIANASSLETQEGG-PFKRSRVIVGQKKSGIDWQTP 61

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
              + V  G G GV+V  I  D S     +DP HP A       G V+YPNVN++ E  D
Sbjct: 62  FTPQNVERGVGEGVKVLSIEKDTSDTRWVYDPTHPKALKYGPKEGYVEYPNVNIVTEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y ANL  +  + DM    LD+ R
Sbjct: 122 LISASRAYEANLAVVNGAKDMFQRALDIAR 151


>gi|329901228|ref|ZP_08272753.1| Flagellar basal-body rod protein FlgC [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549160|gb|EGF33752.1| Flagellar basal-body rod protein FlgC [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 122

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 5/123 (4%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----SGGVRVKKIGVDQ 70
           ++ Q+ R+ +++ NIANA +T  T G   Y+ K + F  V  G    + GV+V K+  D 
Sbjct: 1   MSAQAQRLNVVASNIANADSTTSTNG-QVYKAKQVVFSAVPVGGDAAASGVKVDKVLEDT 59

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +     +DP HP A+  G V  PNVNV+ E  +M   +R Y  N++T+  +  ++  TL 
Sbjct: 60  AAPRLVYDPKHPQADEKGYVSMPNVNVVEEMVNMISASRSYQTNVETMNAAKTLLLKTLT 119

Query: 131 LLR 133
           + +
Sbjct: 120 IGQ 122


>gi|237653585|ref|YP_002889899.1| flagellar basal-body rod protein FlgC [Thauera sp. MZ1T]
 gi|237624832|gb|ACR01522.1| flagellar basal-body rod protein FlgC [Thauera sp. MZ1T]
          Length = 134

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---VMHGSGG 60
           ++    IA S L  QS R+   + N+ANA +        PYR K + F         + G
Sbjct: 3   MLNVFQIAGSALNAQSLRLNATASNLANADSVIS-EDGQPYRAKQVVFAARPVAGPAAVG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++    +     F+P +P AN  G V+ PNVNV+ E  +M   +R Y  N + +  
Sbjct: 62  VQVTQVVESAAPLRLVFEPNNPAANPDGYVEMPNVNVVEEMVNMISASRSYQNNAEVMST 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 ARTLLQRTLQIGQ 134


>gi|325473784|gb|EGC76972.1| FlgC protein [Treponema denticola F0402]
          Length = 151

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L  S +IA +G+ V+  R  +IS NIANA +     G  P++R  +              
Sbjct: 3   LFTSINIAATGMGVERLRTDVISNNIANASSLETQEGG-PFKRSRVIVGQKKSGIDWQTP 61

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
              + +  G G GV+V  I  D S     +DP HP A       G V+YPNVN++ E  D
Sbjct: 62  FTPQNIERGVGEGVKVLSIEKDTSDTRWVYDPTHPKALKYGPKEGYVEYPNVNIVTEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y ANL  +  + DM    LD+ R
Sbjct: 122 LISASRAYEANLAVVNGAKDMFQRALDIAR 151


>gi|300870979|ref|YP_003785850.1| flagellar basal body rod protein FlgC [Brachyspira pilosicoli
           95/1000]
 gi|300688678|gb|ADK31349.1| flagellar basal body rod protein, FlgC [Brachyspira pilosicoli
           95/1000]
          Length = 153

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 22/151 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           + +  + + SGL  Q  R+ +I++NIAN  TT  T G   +RR  + F+    G+     
Sbjct: 3   IFSIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGG-AFRRSRVVFKPRDDGNKYRSP 61

Query: 59  -----------GGVRVKKIGVD-QSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                       GVRV  I  D ++     +DP HP A      +G V+ PNVN + E  
Sbjct: 62  FLPEALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVTEMV 121

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           DM E +R Y AN   I+ +  M  + L+++R
Sbjct: 122 DMMEASRAYEANSTMIQSAKTMFGSALNIIR 152


>gi|119469948|ref|ZP_01612753.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
 gi|119446658|gb|EAW27931.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
          Length = 143

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     IA SG++ Q+ R+   + NI+NA T   +     YR +   F   +  +     
Sbjct: 3   LYNVFDIAGSGMSAQNVRLNTTASNISNANTISSSQD-KTYRARQPVFAAELTKASESVS 61

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+V  I    +    E++P HP A+ +G +  PNVNV+ E A+M   +R Y 
Sbjct: 62  NNQGSSVGVKVLGIVESSAPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMISASRSYE 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N+Q    +  M++ TL L +
Sbjct: 122 TNVQVADAAKQMLSKTLLLGQ 142


>gi|167630287|ref|YP_001680786.1| flagellar basal-body rod protein flgc, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167593027|gb|ABZ84775.1| flagellar basal-body rod protein flgc, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 159

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 67/156 (42%), Gaps = 26/156 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD----TPGSDPYRRKTISFEEVMHGS- 58
            ++S   + SGL  Q  RM IIS N+AN  TT        G  PYRR+   F      + 
Sbjct: 3   FLSSIDTSASGLTAQRFRMDIISNNLANVNTTRTGNSDADGVLPYRRQIPVFAARQAEAD 62

Query: 59  -----------------GGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNV 97
                            GGVRV  +  D+S F   +DP HP A      +G V+ PNVN 
Sbjct: 63  TFASALSAAENRRNATGGGVRVVAVAEDESAFKMIYDPQHPDAIRTGPLTGYVRMPNVNT 122

Query: 98  LVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + E  DM    R Y AN+  I  +  M    L++ +
Sbjct: 123 VTEMVDMISATRAYEANVTAINAAKSMAMKALEIGK 158


>gi|332533177|ref|ZP_08409046.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037459|gb|EGI73913.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 143

 Score =  170 bits (431), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     IA SG++ Q+ R+   + NI+NA T   +     YR +   F   +  +     
Sbjct: 3   LYNVFDIAGSGMSAQNVRLNTTASNISNANTISSSQD-KTYRARQPVFAAELTKASASVS 61

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+V  I    +    E++P HP A+ +G +  PNVNV+ E A+M   +R Y 
Sbjct: 62  NQQGSAVGVKVLGIVESDAPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMISASRSYQ 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N+Q    +  M++ TL L +
Sbjct: 122 TNVQVADAAKQMLSKTLLLGQ 142


>gi|209521587|ref|ZP_03270285.1| flagellar basal-body rod protein FlgC [Burkholderia sp. H160]
 gi|209497970|gb|EDZ98127.1| flagellar basal-body rod protein FlgC [Burkholderia sp. H160]
          Length = 141

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 14/143 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+    +A S ++ QS R+ + + N+ANA +T   P   PY+ K + F   ++  GG
Sbjct: 1   MPSLMNIFGVAGSAMSAQSERLNVTASNLANADST-TGPDGQPYKAKQVVFA--VNPLGG 57

Query: 61  VRVKKIG-----------VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
            R                 D S     ++PG+P ANA G V  PNV+ + E  +M   +R
Sbjct: 58  ARSGSGQQVGGVQVTGVVDDPSPMKTAYEPGNPAANADGYVTLPNVDPVQEMVNMISASR 117

Query: 110 LYMANLQTIKQSHDMMTTTLDLL 132
            Y AN++T+  +  +M  TL + 
Sbjct: 118 SYQANVETLNTAKTLMLKTLTIG 140


>gi|303326604|ref|ZP_07357046.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. 3_1_syn3]
 gi|302862592|gb|EFL85524.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. 3_1_syn3]
          Length = 146

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---------F 51
           MD+L  +  I  SGL     R+  IS N+ANA+TT  TP   PYRR+T+          F
Sbjct: 1   MDFL-TALDIGASGLTADRTRINTISMNLANAKTTR-TPQGGPYRRRTVVQAATDVDDPF 58

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
              M  +      GVRV  + +D+    + ++PGHP ANA G V YP++NV+ E A++  
Sbjct: 59  SVHMRSALDRELKGVRVMAVTMDKRPLKQVYEPGHPDANAEGYVSYPDINVVEEMANLMS 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+ T++    M    L++ +
Sbjct: 119 AQRNYEANVTTVEAIKGMYNKALEIGK 145


>gi|163758013|ref|ZP_02165101.1| flagellar basal-body rod protein C [Hoeflea phototrophica DFL-43]
 gi|162284302|gb|EDQ34585.1| flagellar basal-body rod protein C [Hoeflea phototrophica DFL-43]
          Length = 142

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 77/135 (57%), Positives = 99/135 (73%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L  ++ IA+SGL VQ  RM+I+SEN+AN+++TGDTPG+D YRRKTISF   +  S G 
Sbjct: 5   DPLSLASRIASSGLDVQETRMRILSENLANSQSTGDTPGADAYRRKTISFSWELDRSIGA 64

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              +V KI  D   F  ++DPG+P AN  G+VK PNVNVLVE ADMRE NR Y ANLQT+
Sbjct: 65  SRAKVAKIDFDPGEFNVQYDPGNPAANEEGMVKLPNVNVLVELADMREANRSYEANLQTV 124

Query: 119 KQSHDMMTTTLDLLR 133
           KQ+ ++++ TLDLLR
Sbjct: 125 KQTRELVSMTLDLLR 139


>gi|152997584|ref|YP_001342419.1| flagellar basal-body rod protein FlgC [Marinomonas sp. MWYL1]
 gi|150838508|gb|ABR72484.1| flagellar basal-body rod protein FlgC [Marinomonas sp. MWYL1]
          Length = 151

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     I+ S ++ Q+ R+  I+ N+AN  +   +     YR +   F ++M+ S     
Sbjct: 5   LSNIFTISGSAMSAQTIRLNTIASNMANVDSAASSAD-QTYRARKPVFSQMMNDSMREYG 63

Query: 60  -------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV+V  I    +     ++P HP+AN  G V YPNVN + E ADM  
Sbjct: 64  WNNANKDDTGAGVGVKVDGIVESDAPLQPRYEPDHPMANEDGYVFYPNVNPMEEMADMMS 123

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N++ +  +  MM   L L +
Sbjct: 124 ASRSFQTNVEIMNSAKSMMQKMLTLGQ 150


>gi|85712252|ref|ZP_01043303.1| Flagellar basal body rod protein [Idiomarina baltica OS145]
 gi|85693879|gb|EAQ31826.1| Flagellar basal body rod protein [Idiomarina baltica OS145]
          Length = 150

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 19/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           L    +I+ S ++ QS R+   + N+ANA +   +   + YR ++  F   +        
Sbjct: 3   LFNIFNISGSAMSAQSVRLNTTASNLANANSVSSSID-ETYRARSPIFAAALSDASGKYH 61

Query: 57  -----------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                       S GV+V  +         E+ P HP+A+ +G +   NVN + E A+M 
Sbjct: 62  GTELTNQTQAGQSAGVKVLGVVESDKPLQIEYAPNHPMADKNGYIYRSNVNTMEEMANMI 121

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +R Y  N+Q    +  M    L L +
Sbjct: 122 SASRSYQTNVQVADTAKTMTQRLLRLGQ 149


>gi|32266907|ref|NP_860939.1| flagellar basal body rod protein FlgC [Helicobacter hepaticus ATCC
           51449]
 gi|32262959|gb|AAP78005.1| flagellar basal body rod protein FlgC [Helicobacter hepaticus ATCC
           51449]
          Length = 163

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 33/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-----VMHGS 58
            ++S  I+  GL+ Q  R+  IS NIANA TT    G  PYRR+ + F       V++  
Sbjct: 2   FLSSFDISGYGLSAQRVRINTISSNIANANTTRTDEGG-PYRRREVIFRAFDFNKVLNEK 60

Query: 59  GG---------------------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
            G                           V + KI  D    + ++DP HP AN+ G V 
Sbjct: 61  LGKNNQQLRYEDPLNEGDLGKEPKPAIMSVYIPKIVRDDREPLMKYDPSHPDANSEGYVA 120

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           YPNVN +VE AD+ E  R Y AN+   + + +M +  + + +
Sbjct: 121 YPNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAITMFQ 162


>gi|297584033|ref|YP_003699813.1| flagellar basal-body rod protein FlgC [Bacillus selenitireducens
           MLS10]
 gi|297142490|gb|ADH99247.1| flagellar basal-body rod protein FlgC [Bacillus selenitireducens
           MLS10]
          Length = 142

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 21/141 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHGSG- 59
           +    +++ SGL  Q  RM ++S N+ANA +T         +PYRRK ++FE        
Sbjct: 1   MFHGMNVSASGLTSQRLRMDVVSSNMANAESTRGRFVDGEWEPYRRKMVTFEPNRTSGSR 60

Query: 60  -----------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                            GV+V +I  D+S F   +DP HP AN  G V+ PNV+ L E  
Sbjct: 61  FQDHFRHAVNRNATTGDGVKVGEIIEDESPFRMRYDPDHPDANEDGYVELPNVDPLKEMI 120

Query: 103 DMRETNRLYMANLQTIKQSHD 123
           D+    R Y A + +     +
Sbjct: 121 DLMSATRSYEAGVTSFDAHKN 141


>gi|296127542|ref|YP_003634794.1| flagellar basal-body rod protein FlgC [Brachyspira murdochii DSM
           12563]
 gi|296019358|gb|ADG72595.1| flagellar basal-body rod protein FlgC [Brachyspira murdochii DSM
           12563]
          Length = 153

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 22/151 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           + +  + + SGL  Q  R+ +I++NIAN  TT  T G   +RR  + F+    G+     
Sbjct: 3   IFSIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGG-AFRRSRVIFKPRDDGNKYRSP 61

Query: 59  -----------GGVRVKKIGVD-QSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                       GVRV  I  D ++     +DP HP A      +G V+ PNVN + E  
Sbjct: 62  FLPEALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVTEMV 121

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           DM E +R Y AN   I+ +  M  + L+++R
Sbjct: 122 DMMEASRAYEANSTMIQSAKTMFGSALNIIR 152


>gi|30248320|ref|NP_840390.1| flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
 gi|30138206|emb|CAD84214.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 134

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           L +  ++A S +A QS R+ +++ N+ANA +   + G + YR + + F  +      + G
Sbjct: 3   LFSVFNVAGSSMAAQSQRLNVVASNLANADSATSSTG-EAYRSRQVVFRTIDVTADKAKG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +  D S     +DP HP+AN  G V  PNVNV+ E  +M   +R Y  ++  +  
Sbjct: 62  VKVAGVVNDPSPMRVVYDPKHPMANEKGYVTLPNVNVVDEMVNMMSASRSYQNSVDMMNV 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++   L + +
Sbjct: 122 TKTLLQKALTIGQ 134


>gi|288940407|ref|YP_003442647.1| flagellar basal-body rod protein FlgC [Allochromatium vinosum DSM
           180]
 gi|288895779|gb|ADC61615.1| flagellar basal-body rod protein FlgC [Allochromatium vinosum DSM
           180]
          Length = 139

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M  L    + + S L  QS R+  ++ N+ANA  T  T   D YR K + F+ V+     
Sbjct: 1   MSDLFRIFNTSASALTAQSVRLNTVASNMANAAMTAST-AEDTYRAKHVLFQTVIDQEDP 59

Query: 58  ---SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              +  VRV  I  D+   +  ++P HP AN  G V  P +NV+ E A+M   +R Y AN
Sbjct: 60  NGVAMPVRVAGIVDDECEPIPTYEPNHPHANEEGYVFRPAINVVEEMANMMSASRSYEAN 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ +  +  ++  TL + +
Sbjct: 120 VEVLTTARSLLQRTLQVGQ 138


>gi|238924172|ref|YP_002937688.1| flagellar basal body rod protein [Eubacterium rectale ATCC 33656]
 gi|238875847|gb|ACR75554.1| flagellar basal body rod protein [Eubacterium rectale ATCC 33656]
 gi|291524901|emb|CBK90488.1| flagellar basal-body rod protein FlgC [Eubacterium rectale DSM
           17629]
          Length = 146

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 16/145 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L  + +I+ SG+  +  R  II++NIAN  TT    G  PYRRK ++F E          
Sbjct: 3   LFQAFNISASGMTAERFRTDIIAQNIANVNTTSTKEG-TPYRRKIVTFSEKNVTPFSQIY 61

Query: 58  --------SGGVRVKKIGVDQS-TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GV+V  +  D S  F++E+DP +P A+A G V YPNVN + E  ++ +  
Sbjct: 62  SSSKKAAVGNGVKVSSVTSDYSTDFIKEYDPSNPDADADGYVSYPNVNTVTEMTNLIDAT 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN    + S  M    L + +
Sbjct: 122 RAYEANATAFEASKSMAQNGLQIGK 146


>gi|298530645|ref|ZP_07018047.1| flagellar basal-body rod protein FlgC [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510019|gb|EFI33923.1| flagellar basal-body rod protein FlgC [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 146

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M ++  S  I  S L+ +   + +IS N+ANA TT  TP   PY RK++ F      +  
Sbjct: 1   MSFM-KSLDIGASALSAERTHLNVISMNLANANTTR-TPEGGPYERKSVLFRSTPLETPF 58

Query: 60  -------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV+ +K+  DQ  F   +DP HP A+  G VK P++NV+ E A+M  
Sbjct: 59  GHAMQTELERELRGVKAQKVMTDQRPFKMVYDPAHPDADQEGYVKTPDINVVEEMANMLT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  +  + +M    L++ R
Sbjct: 119 AMRTYEANVSAVTNTKNMFNKALEIGR 145


>gi|323703167|ref|ZP_08114820.1| flagellar basal-body rod protein FlgC [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531826|gb|EGB21712.1| flagellar basal-body rod protein FlgC [Desulfotomaculum nigrificans
           DSM 574]
          Length = 145

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD--TPGSDPYRRKTISFEEVMHGS--- 58
           L  S  I+ SG+  +  R+ +I+ N+AN  T G    P +  YRR+   F E +  +   
Sbjct: 3   LFDSFAISASGMTSERLRLDLIANNVANMNTAGRPNDPNNPVYRRRVPVFAEQLRQTMAA 62

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GVRVK I  D +      +P +P+A+  G V YPN+N++ E  DM   +R Y
Sbjct: 63  NSTEPRGAGVRVKAIVEDPAPPRIVHEPDNPLADQDGNVAYPNINIVNEMVDMITASRAY 122

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  +  +  M    L++ R
Sbjct: 123 EANVTALNAAKSMALKALEISR 144


>gi|323698500|ref|ZP_08110412.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. ND132]
 gi|323458432|gb|EGB14297.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           ND132]
          Length = 145

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 16/146 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           MD++  +  I+ SGL  Q A++ +IS N+AN RTT +T G  PY+RKT+SFE        
Sbjct: 1   MDFM-TALDISASGLTAQRAQLNVISMNMANMRTT-ETAGGGPYQRKTVSFEATPVYSPF 58

Query: 56  ---------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV+V  +  D   F + ++P HP AN  G V YP++NV+ E A+M +
Sbjct: 59  DQAMQDQLNRNLEGVKVTGVLADNRPFKQVYEPNHPDANDQGYVFYPDINVVEEMANMMQ 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLL 132
             R Y AN+QT++   +M    L + 
Sbjct: 119 AMRGYEANVQTVQAVKNMFQKALTIG 144


>gi|78355402|ref|YP_386851.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217807|gb|ABB37156.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 146

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---------F 51
           MD++  +  I  S L+ +   M I S N+ANA+TT  T G  PYRRK +          F
Sbjct: 1   MDFM-TALDIGASALSAERTSMNITSMNLANAKTTR-TIGGGPYRRKAVVMAATEVDDPF 58

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            + M  +      GVRV+ I  D   F + ++PGHP A+A+G VKYP++NV+ E A++  
Sbjct: 59  SKHMQSALDRELRGVRVQHIVRDNRPFRQVYEPGHPDADANGYVKYPDINVVEEMANLMT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + R Y A++ TI+    M T  L++ R
Sbjct: 119 SQRGYQASVSTIEAVKSMYTKALEIGR 145


>gi|225619783|ref|YP_002721040.1| flagellar basal body rod protein FlgC [Brachyspira hyodysenteriae
           WA1]
 gi|225214602|gb|ACN83336.1| flagellar basal body rod protein FlgC [Brachyspira hyodysenteriae
           WA1]
          Length = 153

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 22/151 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           + +  + + SGL  Q  R+ +I++NIAN  TT  T G   +RR  + F+    G+     
Sbjct: 3   IFSIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGG-AFRRSRVIFKPRDDGNKYRSP 61

Query: 59  -----------GGVRVKKIGVD-QSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                       GVRV  I  D ++     +DP HP A      +G V+ PNVN + E  
Sbjct: 62  FLPDALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVTEMV 121

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           DM E +R Y AN   I+ +  M  + L+++R
Sbjct: 122 DMMEASRAYEANSTMIQSAKTMFGSALNIIR 152


>gi|89092134|ref|ZP_01165089.1| flagellar basal-body rod protein FlgC [Oceanospirillum sp. MED92]
 gi|89083869|gb|EAR63086.1| flagellar basal-body rod protein FlgC [Oceanospirillum sp. MED92]
          Length = 145

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 14/143 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L     IA S +  Q+ R+   + N+ANA +   +   + YR +   F            
Sbjct: 3   LSNVFGIAGSAMNAQTIRLNTTASNLANAESVSSSLD-ETYRARKPVFAVQQTDPLAEPD 61

Query: 52  -EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
            E  +    GV+V  I   ++   +E++P HP+A+  G V YPNVNV+ E ADM   +R 
Sbjct: 62  NEAGIAAGRGVQVLGIVESEAELRQEYNPAHPMADEQGFVYYPNVNVVEEMADMISASRS 121

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           +  N + +  +  M+  T+ L +
Sbjct: 122 FQINTEIMNTAKQMLQQTIRLGQ 144


>gi|315498435|ref|YP_004087239.1| flagellar basal-body rod protein flgc [Asticcacaulis excentricus CB
           48]
 gi|315416447|gb|ADU13088.1| flagellar basal-body rod protein FlgC [Asticcacaulis excentricus CB
           48]
          Length = 140

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/128 (45%), Positives = 83/128 (64%), Gaps = 1/128 (0%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSGGVRVKK 65
           +  +A S L  Q ARM+II+ENIANA +TG TPG+DPYR +   FE   + G+ GV++  
Sbjct: 12  TLSVAASALRAQQARMRIIAENIANADSTGQTPGADPYRGQIPVFEAAKIDGAMGVKLAA 71

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D++ F  ++DP HP A+A+G VK  NV  L+++ DMR+  R Y ANL  I+ +  M 
Sbjct: 72  VRPDEAAFEMDYDPSHPAADANGYVKRSNVKSLIQSMDMRDAQRAYEANLNVIETTRSME 131

Query: 126 TTTLDLLR 133
             TLDLL+
Sbjct: 132 QKTLDLLK 139


>gi|54308095|ref|YP_129115.1| flagellar basal body rod protein FlgC [Photobacterium profundum
           SS9]
 gi|46912521|emb|CAG19313.1| Putative flagellar basal body rod protein FlgC [Photobacterium
           profundum SS9]
          Length = 138

 Score =  168 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   + YR +   F   ++ +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSS-AEETYRARHPIFAAALNSASYQRA 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+VK I   Q     E++P HP+AN  G +  PNVNV+ E A+M   +R Y +N+Q
Sbjct: 62  ESVPVQVKGIVESQKPLRAEYNPQHPLANDEGYIYKPNVNVMEEMANMISASRSYQSNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+ +TL + +
Sbjct: 122 VADASKQMLMSTLQMGK 138


>gi|94264091|ref|ZP_01287890.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
 gi|93455507|gb|EAT05697.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
          Length = 144

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 15/146 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           MD ++ + +I+ S L  + +R+ I S N+ANA TT    G  PYR K++ FE        
Sbjct: 1   MD-ILTAMNISGSALKAERSRLNIASMNMANANTTRTVEGG-PYRAKSVVFEARPLERDF 58

Query: 54  --VMHGSGG----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
              + G+      V V ++  D++ F E ++P HP A+ +GIV+YPNVN   +  DM   
Sbjct: 59  NTTLQGAASRLRKVEVAEVVEDRAPFREVYEPHHPDADENGIVRYPNVNTAEQMVDMMNA 118

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+  +    +M    L++ R
Sbjct: 119 RRSYEANVAALDAVKEMALRALEISR 144


>gi|77359720|ref|YP_339295.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874631|emb|CAI85852.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 143

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     IA SG++ Q+ R+   + NI+NA T   +     YR +   F   +  +     
Sbjct: 3   LYNVFDIAGSGMSAQNVRLNTTASNISNANTISSSQD-KTYRARQPVFAAELTKASASAS 61

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+V  I         E++P HP A+ +G +  PNVNV+ E A+M   +R Y 
Sbjct: 62  NPQGSAVGVKVLGIVESNKPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMISASRSYQ 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N+Q    +  M++ TL L +
Sbjct: 122 TNVQVADAAKQMLSKTLLLGQ 142


>gi|188592115|ref|YP_001796713.1| flgc: flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
           19424]
 gi|170938489|emb|CAP63476.1| FlgC: Flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
           19424]
          Length = 122

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 5/123 (4%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GGVRVKKIGVDQ 70
           +A QS RM + + N+ANA +    P    YR K + F           GGV+V+ +  D 
Sbjct: 1   MAAQSQRMNVTASNLANADSVVS-PDGQAYRAKQVVFGMAPTPGQTDIGGVQVQGVSEDP 59

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           S      +P HP+ANA G V  PNVN + E  +M   +R Y AN++ +  + +MM  TL 
Sbjct: 60  SPPRMVHNPTHPMANAQGYVVMPNVNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLT 119

Query: 131 LLR 133
           + +
Sbjct: 120 IGQ 122


>gi|261856362|ref|YP_003263645.1| flagellar basal-body rod protein FlgC [Halothiobacillus
           neapolitanus c2]
 gi|261836831|gb|ACX96598.1| flagellar basal-body rod protein FlgC [Halothiobacillus
           neapolitanus c2]
          Length = 133

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 3/132 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-- 61
           L +  ++++S ++ QS R+   + N+ANA      P  D Y+ +   F++VM  +GGV  
Sbjct: 3   LFSIFNVSSSAMSAQSLRLNATASNMANADAVATKP-EDAYKAREPVFQQVMEQNGGVGV 61

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           RV  I    +     ++PG+P+AN  G V   NVN + E  +M   +R Y  N+Q +  +
Sbjct: 62  RVSGITQSTAPNPALYEPGNPLANKDGYVYSSNVNPVEEMVNMLSASRSYQTNVQMMDTA 121

Query: 122 HDMMTTTLDLLR 133
            ++   TL L +
Sbjct: 122 KNLALRTLQLGQ 133


>gi|90411003|ref|ZP_01219017.1| flagellar basal body rod protein [Photobacterium profundum 3TCK]
 gi|90328216|gb|EAS44527.1| flagellar basal body rod protein [Photobacterium profundum 3TCK]
          Length = 138

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F   ++ +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSS-AEETYKARHPIFAAALNSASYQRA 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+VK I   Q     E++P HP+AN  G +  PNVNV+ E A+M   +R Y +N+Q
Sbjct: 62  ESVPVQVKGIVESQKPLRAEYNPQHPLANDEGYIYKPNVNVMEEMANMISASRSYQSNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+ +TL + +
Sbjct: 122 VADASKQMLMSTLQMGK 138


>gi|85858815|ref|YP_461017.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
 gi|85721906|gb|ABC76849.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
          Length = 143

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 50/145 (34%), Positives = 72/145 (49%), Gaps = 14/145 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           MD+L  S  I +SG A Q A+M +I+ N+AN  TT  TP   PY+RK   F         
Sbjct: 1   MDFL-TSFRICSSGFAAQRAKMDVIASNLANVSTT-STPEGGPYKRKVAIFSSENVKQKF 58

Query: 54  -----VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                +      V +K++  D  T  + +DP HP A+  G V  PNVNV++E  DM   +
Sbjct: 59  RFGDRLRDAIREVALKEVVEDGETVRKVYDPSHPDADQQGNVAMPNVNVMMEMTDMITAS 118

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y A +     + +M   TLD+ +
Sbjct: 119 RAYEACVTAFDATKNMALKTLDIGK 143


>gi|148261124|ref|YP_001235251.1| flagellar basal body rod protein FlgC [Acidiphilium cryptum JF-5]
 gi|326404525|ref|YP_004284607.1| flagellar basal-body rod protein FlgC [Acidiphilium multivorum
           AIU301]
 gi|146402805|gb|ABQ31332.1| flagellar basal-body rod protein FlgC [Acidiphilium cryptum JF-5]
 gi|325051387|dbj|BAJ81725.1| flagellar basal-body rod protein FlgC [Acidiphilium multivorum
           AIU301]
          Length = 134

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/130 (48%), Positives = 87/130 (66%), Gaps = 3/130 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---VR 62
            +  I  +GL+ Q AR+Q+I++N+ANA +TG TPGS+PY+RKTISF++V   + G   V+
Sbjct: 5   TTLDITAAGLSAQDARLQVIAQNLANADSTGSTPGSNPYQRKTISFQDVFSQTTGTDLVQ 64

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V  IG D + F  ++DP +P ANA G VK PNVN LVE  DM++  R Y ANL  +  + 
Sbjct: 65  VANIGKDTAPFPMKYDPSNPAANAQGYVKLPNVNSLVELMDMQQAERSYDANLSVMNATR 124

Query: 123 DMMTTTLDLL 132
            MMT TL L+
Sbjct: 125 GMMTRTLGLI 134


>gi|92114100|ref|YP_574028.1| flagellar basal-body rod protein FlgC [Chromohalobacter salexigens
           DSM 3043]
 gi|91797190|gb|ABE59329.1| flagellar basal-body rod protein FlgC [Chromohalobacter salexigens
           DSM 3043]
          Length = 135

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           + +   I++S ++ QS RM   + N+ANA +    P  +PYR K + F+    G    GG
Sbjct: 3   MFSIFDISSSAMSAQSQRMNATASNMANADSVAG-PDGEPYRAKHVMFQAQSQGGSELGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VR  ++  D +    E+ PGHP+A+  G V  PNV+ + E  DM   +R Y AN++ +  
Sbjct: 62  VRATEVVEDDAPPRMEYRPGHPLADEDGYVAMPNVDPVDEMVDMIAASRSYQANVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           S  +M  TL + +
Sbjct: 122 SKSLMQQTLSIGQ 134


>gi|146281769|ref|YP_001171922.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri A1501]
 gi|145569974|gb|ABP79080.1| flagellar basal-body rod protein FlgC [Pseudomonas stutzeri A1501]
          Length = 134

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 17/135 (12%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-------------- 60
           ++ QS R+  IS NIANA T   +     YR +   F  V   +GG              
Sbjct: 1   MSAQSTRLNTISSNIANAETVSSSVD-QTYRARHPVFATVFQQAGGQPNESLFAGQDQAG 59

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+V  +  DQ      ++P HP A+ SG V YPNVNV+ E ADM   +R +  N + +
Sbjct: 60  AGVQVLGVVEDQGELQARYEPNHPAADESGYVYYPNVNVVEEMADMISASRAFQTNAELM 119

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+   L L +
Sbjct: 120 NTAKTMLQKVLTLGQ 134


>gi|189426355|ref|YP_001953532.1| flagellar basal-body rod protein FlgC [Geobacter lovleyi SZ]
 gi|189422614|gb|ACD97012.1| flagellar basal-body rod protein FlgC [Geobacter lovleyi SZ]
          Length = 145

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           MD L  + + ++S L  +  RM +IS N+AN  TT  TP   PY+RK   F         
Sbjct: 1   MD-LFTAMNTSSSALTAERTRMNLISSNLANVNTTR-TPEGGPYKRKDAVFAATAPVDAF 58

Query: 54  -------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                         V V +I  D+S    ++DP HP AN  G V  PNVNV+ E ADM  
Sbjct: 59  GKALGGAADRHVREVNVVEIVEDKSAPRMQYDPAHPDANPQGYVALPNVNVVEEMADMIT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R+Y AN+ + + + +M   TL++ +
Sbjct: 119 ATRVYEANVMSAQAAKNMALKTLEISK 145


>gi|15895433|ref|NP_348782.1| flagellar basal body rod protein FlgC [Clostridium acetobutylicum
           ATCC 824]
 gi|15025157|gb|AAK80122.1|AE007716_11 Flagellar basal body rod protein FlgC [Clostridium acetobutylicum
           ATCC 824]
 gi|325509579|gb|ADZ21215.1| flagellar basal body rod protein FlgC [Clostridium acetobutylicum
           EA 2018]
          Length = 143

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 53/132 (40%), Positives = 68/132 (51%), Gaps = 13/132 (9%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------------HGSGGV 61
           GL+ +  RM  IS NIAN  TT    G  PYRRK   F++              +   GV
Sbjct: 13  GLSAERLRMDTISSNIANISTTRTADGG-PYRRKVAVFQDNFENLFNKETGKYENKPLGV 71

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           R  KI  D+S F  E+DPG+P ANA G V  PNVN+L E ADM  + R Y AN+  +   
Sbjct: 72  RAVKIDEDKSPFRMEYDPGNPDANADGYVAMPNVNILNEMADMMASTRAYEANVTAMNDE 131

Query: 122 HDMMTTTLDLLR 133
             M T  L++ +
Sbjct: 132 KGMYTKALEIGK 143


>gi|303248348|ref|ZP_07334609.1| flagellar basal-body rod protein FlgC [Desulfovibrio fructosovorans
           JJ]
 gi|302490256|gb|EFL50170.1| flagellar basal-body rod protein FlgC [Desulfovibrio fructosovorans
           JJ]
          Length = 146

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 15/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---------F 51
           MD L  +  I +SG++ Q   M  IS N+AN RTT    G  PY RK++          F
Sbjct: 1   MD-LFTAMDIGSSGMSAQRTLMNTISMNLANIRTTRTVNGGGPYVRKSVMLESTPIDSPF 59

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            E M  +      GV+V  +  D   F  +++PGHP ANA G V YP++NV+ E A+M  
Sbjct: 60  SEAMKTAQDRELAGVKVTGLVNDNRPFRMQYEPGHPDANAEGYVAYPDINVVEEMANMIT 119

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y A+  +I     M +  L++ R
Sbjct: 120 AMRSYEASSSSIGTVKTMFSKALEIGR 146


>gi|56964036|ref|YP_175767.1| flagellar basal body rod protein FlgC [Bacillus clausii KSM-K16]
 gi|56910279|dbj|BAD64806.1| flagellar basal-body rod protein FlgC [Bacillus clausii KSM-K16]
          Length = 148

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 16/146 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTIS--------FE 52
           + +S +++ SGL +Q  RM + + NIANA TT          PY+R+ +         F 
Sbjct: 3   MFSSMNVSGSGLTLQRLRMDVAASNIANADTTRAERVNGEWQPYQRRMVVQGPTSMGRFS 62

Query: 53  EVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +  +      GV  K+I  D +     +DP HP AN  G V  PNV +  E  D+   
Sbjct: 63  SDLQKATAELDQGVVAKQIVRDPTPATLVYDPAHPDANEDGYVSKPNVEIAREMVDITSA 122

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+  ++ S  M+   L++ R
Sbjct: 123 TRSYEANVTALQASKGMVMKALEIGR 148


>gi|299068730|emb|CBJ39969.1| FlgC: Flagellar basal-body rod protein [Ralstonia solanacearum
           CMR15]
          Length = 129

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 5/130 (3%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVK 64
             +A S L  QS RM +++ N+ANA +    P    YR K + F       G   GV V 
Sbjct: 1   MDVAGSALTAQSKRMNVVASNLANAESV-TGPDGTAYRAKQVVFSPEQETDGYATGVSVD 59

Query: 65  KIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++  D  +       PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++    +  
Sbjct: 60  RVVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKT 119

Query: 124 MMTTTLDLLR 133
           M    L L +
Sbjct: 120 MAAKALTLGQ 129


>gi|291558197|emb|CBL35314.1| flagellar basal-body rod protein FlgC [Eubacterium siraeum V10Sc8a]
          Length = 160

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
            ++S +IA SG+A +  R+ +IS+N+ANA+TT  T    PYRR+ + F E          
Sbjct: 3   FLSSLNIAASGMAAERLRLDVISQNVANAKTTR-TEDGTPYRRQVVLFSENKGFNSVLEE 61

Query: 54  ------------------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNV 95
                                 + GV V +I  D++     +DP HP A+ +G    PNV
Sbjct: 62  TIAKRKEKIAGGVPANTVSATKNKGVLVTEIVEDETPLTPVYDPTHPDADENGYYYLPNV 121

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           +V  E  D     R Y ANL  +     M  T L +  +
Sbjct: 122 DVAEEQMDAMAATRSYEANLAVLNAVKSMAQTALSIGNN 160


>gi|332305613|ref|YP_004433464.1| flagellar basal-body rod protein FlgC [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172942|gb|AEE22196.1| flagellar basal-body rod protein FlgC [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 140

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     IA++G++ QS R+   + N+ANA +   +     Y+ +   F   +  +     
Sbjct: 3   LFNVMDIASTGMSAQSVRLNTTASNVANANSVSSSYD-QTYKARHPVFAAELQRASQDQN 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV+V  +   Q+    E+ PGHP+A+ +G +  PNVN++ E ADM   ++ Y  N+Q
Sbjct: 62  AGTGVQVLGVVESQAPLQIEYSPGHPMADENGYIYKPNVNIVEEMADMMSASKAYETNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  +    L L +
Sbjct: 122 VADTTKRLFRNVLRLGQ 138


>gi|167770222|ref|ZP_02442275.1| hypothetical protein ANACOL_01565 [Anaerotruncus colihominis DSM
           17241]
 gi|167667544|gb|EDS11674.1| hypothetical protein ANACOL_01565 [Anaerotruncus colihominis DSM
           17241]
          Length = 145

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 15/146 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           M ++  S  I  S L  +  RM  I +NIAN+ TT  TP  +PYRRK + F+E       
Sbjct: 1   MSFM-KSMDIVGSALTAERFRMDTILQNIANSNTTR-TPEGEPYRRKQVVFQERAIDFQS 58

Query: 54  -VMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +   S     GGVRV ++   Q  F   +DP HP AN  G V YPNVN+  E  D+   
Sbjct: 59  ALADASNRIERGGVRVTEVVESQRDFTPVYDPSHPDANEDGYVMYPNVNLTEERVDLMAA 118

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  Y ANL  +     +    L++ +
Sbjct: 119 SNAYDANLTALAVVKSLALKALEIGK 144


>gi|108563932|ref|YP_628248.1| flagellar basal body rod protein FlgC [Helicobacter pylori HPAG1]
 gi|188528350|ref|YP_001911037.1| flagellar basal body rod protein FlgC [Helicobacter pylori Shi470]
 gi|217033829|ref|ZP_03439254.1| hypothetical protein HP9810_877g33 [Helicobacter pylori 98-10]
 gi|107837705|gb|ABF85574.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
 gi|188144590|gb|ACD49007.1| flagellar basal body rod protein FlgC [Helicobacter pylori Shi470]
 gi|216943727|gb|EEC23170.1| hypothetical protein HP9810_877g33 [Helicobacter pylori 98-10]
 gi|308062841|gb|ADO04729.1| flagellar basal body rod protein FlgC [Helicobacter pylori Cuz20]
 gi|315585965|gb|ADU40346.1| flagellar basal-body rod protein FlgC [Helicobacter pylori 35A]
 gi|317013372|gb|ADU83980.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           Lithuania75]
 gi|317179760|dbj|BAJ57548.1| flagellar basal body rod protein FlgC [Helicobacter pylori F30]
 gi|317181261|dbj|BAJ59047.1| flagellar basal body rod protein FlgC [Helicobacter pylori F32]
          Length = 161

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|295690698|ref|YP_003594391.1| flagellar basal-body rod protein FlgC [Caulobacter segnis ATCC
           21756]
 gi|295432601|gb|ADG11773.1| flagellar basal-body rod protein FlgC [Caulobacter segnis ATCC
           21756]
          Length = 139

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 58/120 (48%), Positives = 79/120 (65%), Gaps = 1/120 (0%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSGGVRVKKIGVDQSTF 73
           L  Q  RM++I+ENIANA +T  T G DPYRR+   F    + G+ GV++ ++  DQS F
Sbjct: 19  LRAQQGRMRVIAENIANANSTATTAGGDPYRRQLPIFRPTKVQGAEGVQMVRVDPDQSDF 78

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             E+DPG+P A+A+G VK PNVN LVE  DM+E  R Y ANL  I+ +  M + TLD+L+
Sbjct: 79  KTEYDPGNPAADANGYVKLPNVNSLVEALDMKEAQRAYEANLNVIETARVMESRTLDILK 138


>gi|170743258|ref|YP_001771913.1| flagellar basal body rod protein FlgC [Methylobacterium sp. 4-46]
 gi|168197532|gb|ACA19479.1| flagellar basal-body rod protein FlgC [Methylobacterium sp. 4-46]
          Length = 136

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 60/136 (44%), Positives = 86/136 (63%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           MD++  +  IA SGL  QS RM++ISENIANA +     G +PYRRK  +F   +     
Sbjct: 1   MDFM-KAIGIAASGLRAQSGRMRVISENIANADSEPTRAGVEPYRRKVPTFANRLDRELD 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V + ++  DQ+ F  + DPG+PVA+A G V+ PNVN+LVET DMRE  R Y ANL  
Sbjct: 60  ARMVDLGRVRRDQAPFRTKHDPGNPVADAKGDVQLPNVNLLVETVDMREAQRSYEANLNM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  M++ T+D+L+
Sbjct: 120 VTAARRMISRTIDILK 135


>gi|114320055|ref|YP_741738.1| flagellar basal-body rod protein FlgC [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226449|gb|ABI56248.1| flagellar basal-body rod protein FlgC [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 151

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 20/149 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     ++ SG+  Q  R+  ++ N+AN+ T   +P    YR +   F  V+  +     
Sbjct: 3   LFKVFDVSGSGMNAQQTRLNTVASNLANSETVAGSP-EQAYRSRQPVFASVLQAAQQGQA 61

Query: 60  ---------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                          GV+V+ I    +     + P HP A+  G V   NVN + E  +M
Sbjct: 62  AGNPNHPGDARGTNVGVKVEDIVQSDAPVQPLYMPNHPQADEQGYVYRSNVNPVEEMTNM 121

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +R Y  N++ +  S +++  TL L +
Sbjct: 122 ISASRSYQNNVEVMNTSKELLLQTLRLGQ 150


>gi|109899404|ref|YP_662659.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas atlantica
           T6c]
 gi|109701685|gb|ABG41605.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas atlantica
           T6c]
          Length = 140

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     IA++G++ QS R+   + N+ANA +   +     Y+ +   F   +  +     
Sbjct: 3   LFNVMDIASTGMSAQSVRLNTTASNVANANSVSSSYD-QTYKARHPVFAAELQRASQDQN 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV+V  I    +    E+ PGHP+A+ +G +  PNVN++ E ADM   ++ Y  N+Q
Sbjct: 62  AGTGVQVMGIVESDAPLQIEYSPGHPMADENGYIYKPNVNIVEEMADMMSASKAYETNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  +    L L +
Sbjct: 122 VADTTKRLFRNVLRLGQ 138


>gi|15646165|ref|NP_208349.1| flagellar basal body rod protein FlgC [Helicobacter pylori 26695]
 gi|217031711|ref|ZP_03437215.1| hypothetical protein HPB128_155g24 [Helicobacter pylori B128]
 gi|298737153|ref|YP_003729683.1| flagellar basal-body rod protein FlgC [Helicobacter pylori B8]
 gi|2314741|gb|AAD08598.1| flagellar basal-body rod protein (flgC) [Helicobacter pylori 26695]
 gi|216946558|gb|EEC25158.1| hypothetical protein HPB128_155g24 [Helicobacter pylori B128]
 gi|298356347|emb|CBI67219.1| flagellar basal-body rod protein FlgC [Helicobacter pylori B8]
          Length = 161

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQITPYEDPLDEGDEYPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|317121813|ref|YP_004101816.1| flagellar basal-body rod protein FlgC [Thermaerobacter marianensis
           DSM 12885]
 gi|315591793|gb|ADU51089.1| flagellar basal-body rod protein FlgC [Thermaerobacter marianensis
           DSM 12885]
          Length = 179

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 46/174 (26%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------- 56
             +  IA SG+  Q  R+ +I+ N+AN  TT    G  PYRR    F+E +         
Sbjct: 6   FNTFDIAASGMTAQRLRLDLIASNLANVDTTRTAQGG-PYRRLVPVFQERVRPFAEVLRE 64

Query: 57  ----------GSGGVRVKK---------------------------IGVDQSTFVEEFDP 79
                      +GGV                               +  D S     +DP
Sbjct: 65  RAAGFGGMSGSAGGVSGAAGWQTGGPAGGAGPALGGPALAGVQVAAVVADPSPPRLVYDP 124

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           GHP A   G V YPNV+ L+E  ++    R Y AN+     +  +    L++ R
Sbjct: 125 GHPDAGPDGYVAYPNVDPLMEMVNLLAATRAYEANVAVFSAARTLALRALEIGR 178


>gi|46578731|ref|YP_009539.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603705|ref|YP_968105.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris DP4]
 gi|46448143|gb|AAS94798.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563934|gb|ABM29678.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris DP4]
 gi|311232603|gb|ADP85457.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris RCH1]
          Length = 145

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---------F 51
           MD++  +  I  S L  +   M IIS N+ANA+TT    G  PYRRKT           F
Sbjct: 1   MDFM-TALDIGASALTAERTNMNIISMNLANAKTTRTAEGG-PYRRKTTIMAATEVDGPF 58

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            + M  +      GVRV  +  DQ  F   ++PGHP A+  G V YP++NV+ E A++  
Sbjct: 59  SKQMESALDRELRGVRVMNVVRDQRPFKRVYEPGHPDADQQGFVSYPDINVVEEMANLMT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+ T+     M +  L++ R
Sbjct: 119 AQRGYEANVTTVDTVKAMYSKALEIGR 145


>gi|315452789|ref|YP_004073059.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
 gi|315131841|emb|CBY82469.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
          Length = 163

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 33/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
            ++S  I+  GL+ Q  R  +IS NIANA TT    G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRVRANLISSNIANANTTRTDEGG-PYRRQEAIFKSFDFNKILNEK 60

Query: 56  ------------------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
                                       GV ++KI  D    + ++DP HP A+A+G V 
Sbjct: 61  LAQNNNLMEYEDPLDESDEIEKPNPPITGVYIEKIVRDDKAPLLKYDPTHPDADANGYVS 120

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           YPNVN +VE AD+ E  R Y AN+   + + +M T  + +L+
Sbjct: 121 YPNVNPVVEMADLIEATRAYQANVAAFQSTKNMATNAIGMLQ 162


>gi|167750732|ref|ZP_02422859.1| hypothetical protein EUBSIR_01710 [Eubacterium siraeum DSM 15702]
 gi|167656411|gb|EDS00541.1| hypothetical protein EUBSIR_01710 [Eubacterium siraeum DSM 15702]
 gi|291532066|emb|CBK97651.1| flagellar basal-body rod protein FlgC [Eubacterium siraeum 70/3]
          Length = 160

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
            ++S +IA SG+A +  R+ +IS+N+ANA+TT  T    PYRR+ + F E          
Sbjct: 3   FLSSLNIAASGMAAERLRLDVISQNVANAKTTR-TEDGTPYRRQVVLFSENKGFNSVLEE 61

Query: 54  ------------------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNV 95
                                 + GV V +I  D++     +DP HP A+ +G    PNV
Sbjct: 62  TIAKRKEKIAGGVPANTVSATKNKGVLVTEIVEDETPLTPVYDPTHPDADENGYYYLPNV 121

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           +V  E  D     R Y ANL  +     M  T L +  +
Sbjct: 122 DVAEEEMDAMAATRSYEANLAVLNAVKSMAQTALSIGNN 160


>gi|317010250|gb|ADU80830.1| flagellar basal body rod protein FlgC [Helicobacter pylori India7]
          Length = 161

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 54  --------------------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                +     V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQITPYEDPLDEGDDNSLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|260774936|ref|ZP_05883837.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609191|gb|EEX35349.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 138

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSKAKYGRD 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  HTVPVQVLGIVESDKPLDAEYNPEHPLANDDGYIYKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLLRTLQMGQ 138


>gi|308273186|emb|CBX29789.1| Flagellar basal-body rod protein flgC [uncultured Desulfobacterium
           sp.]
          Length = 140

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 11/142 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFE 52
           M+++  S  I++SGL  Q  RM II+EN++N  TT    G  PYRRK I        SF+
Sbjct: 1   MNFM-ESLKISSSGLYAQRKRMDIIAENLSNIETTRTEKGG-PYRRKMIAIGSEPIDSFD 58

Query: 53  EVMHGS-GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           EV+     GVRV  I  D+S F   ++P HP A+  G +  PNV++ VE A+M      +
Sbjct: 59  EVLDSQLEGVRVDAIVEDESPFRIVYNPSHPDADKDGCLSKPNVDLAVEMANMLMARNAF 118

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            ANL  IK +  M+   L++ +
Sbjct: 119 SANLSAIKSTRQMVLKALEIGK 140


>gi|219670161|ref|YP_002460596.1| flagellar basal-body rod protein FlgC [Desulfitobacterium hafniense
           DCB-2]
 gi|219540421|gb|ACL22160.1| flagellar basal-body rod protein FlgC [Desulfitobacterium hafniense
           DCB-2]
          Length = 176

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 43/173 (24%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSD--PYRRKTISFEE----- 53
           +  S  I+ SGL  Q  R+ +IS NIAN  TT     T   +  PY+R+ + F+      
Sbjct: 3   IFGSMDISASGLTAQRLRLDVISNNIANINTTRTGQLTEAGNQIPYQRQVVVFKARGTES 62

Query: 54  --------VMHG------------------SGGVRVKKIGVDQSTFVEEFDPGHPVA--- 84
                    + G                    GV V+ I  D   F  E++P  P A   
Sbjct: 63  SFAETLNQALQGRSVSTTALLQGQTTSGATGNGVEVQAIAEDTLPFRLEYNPDSPDAAQT 122

Query: 85  ----NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 +G V+ PNVN++ E  DM   +R Y AN+  +  S  MM+  L++ +
Sbjct: 123 TEDGIPAGYVRMPNVNIVTEMVDMISASRAYEANVTALNASKAMMSKALEIGK 175


>gi|322379367|ref|ZP_08053738.1| flagellar basal body rod protein FlgC [Helicobacter suis HS1]
 gi|322380862|ref|ZP_08054952.1| flagellar basal body rod protein FlgC [Helicobacter suis HS5]
 gi|321146713|gb|EFX41523.1| flagellar basal body rod protein FlgC [Helicobacter suis HS5]
 gi|321148185|gb|EFX42714.1| flagellar basal body rod protein FlgC [Helicobacter suis HS1]
          Length = 165

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 33/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M   ++S  I+  GL+ Q  R  +IS NIANA TT    G  PYRR+   F+        
Sbjct: 1   MRMFLSSFDISGYGLSAQRVRANLISSNIANANTTRTDEGG-PYRRQEAVFKSFDFNKVL 59

Query: 56  ---------------------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                          GV ++KI  D    + ++DP HP A+A+G
Sbjct: 60  NEKLAKNNDLMEYEDPLDESDEIEKPNPPIMGVYIEKIVRDDKAPLLKYDPSHPDADANG 119

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 120 YVSYPNVNPVVEMADLIEATRAYQANVAAFQSTKNMAANAIGMLQ 164


>gi|329890582|ref|ZP_08268925.1| flagellar basal-body rod protein FlgC [Brevundimonas diminuta ATCC
           11568]
 gi|328845883|gb|EGF95447.1| flagellar basal-body rod protein FlgC [Brevundimonas diminuta ATCC
           11568]
          Length = 144

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 58/129 (44%), Positives = 84/129 (65%), Gaps = 1/129 (0%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSGGVRVK 64
            +  +A+S L  Q +RM+II+ENIANA +T +  G  PYRR+T  F+   + G+ GV + 
Sbjct: 15  TAMAVASSALKAQQSRMRIIAENIANAESTANVAGGQPYRRQTPVFQARNVDGATGVVLA 74

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           ++  DQS F  ++DP HP ANA G V+ PNV+ LVE  DMRE  R Y ANL  I+ + +M
Sbjct: 75  EVRPDQSDFRMDYDPSHPAANAEGYVQRPNVDTLVEAMDMREAQRAYEANLNVIETARNM 134

Query: 125 MTTTLDLLR 133
            + TLD+++
Sbjct: 135 DSRTLDIIK 143


>gi|317178281|dbj|BAJ56070.1| flagellar basal body rod protein FlgC [Helicobacter pylori F16]
          Length = 161

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQITPYEDPLDEGDDNPLIPITSVMVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVVAFQSAKNMAQNAIGMLQ 160


>gi|315127355|ref|YP_004069358.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
 gi|315015869|gb|ADT69207.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
          Length = 143

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     IA SG++ Q+ R+   + NI+NA T   +   + YR +   F   +  +     
Sbjct: 3   LYNVFDIAGSGMSAQNVRLNTTASNISNANTISSSQN-ETYRARQPVFAAELTKASASAS 61

Query: 60  -------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GV+V  +         E++P HP A+ +G +  PNVNV+ E A+M   +R Y 
Sbjct: 62  NPQGSAVGVKVLGVVESNKPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMISASRSYQ 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N+Q    +  M++ TL L +
Sbjct: 122 TNVQVADAAKQMLSKTLLLGQ 142


>gi|209695764|ref|YP_002263694.1| flagellar basal body rod protein FlgC [Aliivibrio salmonicida
           LFI1238]
 gi|208009717|emb|CAQ80021.1| flagellar basal-body rod protein FlgC [Aliivibrio salmonicida
           LFI1238]
          Length = 138

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++A S ++ +S R+   S N+ANA +   +  S+ Y+ +   F   +  +     
Sbjct: 3   LFNVFNVAGSAMSAESVRLNTTSSNMANADSVSSS-ASETYKARHAIFGAELSKAKYKQD 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I   Q     E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  FTVPVKVLGIVESQKPLRAEYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
                  M+ +TL + +
Sbjct: 122 VADAGKQMLQSTLRMGQ 138


>gi|261840251|gb|ACY00017.1| flagellar basal body rod protein FlgC [Helicobacter pylori 52]
 gi|332674370|gb|AEE71187.1| flagellar basal-body rod protein FlgC [Helicobacter pylori 83]
          Length = 161

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQIAPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|254508426|ref|ZP_05120546.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus 16]
 gi|219548636|gb|EED25641.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus 16]
          Length = 138

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSKAKYGND 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  HTVPVKVMGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLLRTLQMGQ 138


>gi|297380732|gb|ADI35619.1| flagellar basal-body rod protein FlgC [Helicobacter pylori v225d]
          Length = 161

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQITPYEDPLDEGDNNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|261838846|gb|ACX98612.1| flagellar basal-body rod protein [Helicobacter pylori 51]
          Length = 161

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQITPYENPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|317182784|dbj|BAJ60568.1| flagellar basal body rod protein FlgC [Helicobacter pylori F57]
          Length = 161

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNHQITPYEDPLDESDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|312882661|ref|ZP_07742398.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369622|gb|EFP97137.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 138

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKAKYGRD 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I   Q     E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  HTVPVKVLGIVESQKPLNAEYNPDHPLANNEGYIYKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLLRTLQMGQ 138


>gi|328958286|ref|YP_004375672.1| flagellar basal body rod protein FlgC [Carnobacterium sp. 17-4]
 gi|328674610|gb|AEB30656.1| flagellar basal body rod protein FlgC [Carnobacterium sp. 17-4]
          Length = 145

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 12/140 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           +  S  I  SGL+++  ++  IS NIAN  TT    G  PY +K + FEE          
Sbjct: 3   IFDSMQINASGLSLERLKLDTISTNIANVNTTRTEDGEGPYLKKEVVFEESFKQVETSLA 62

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                 S GV+  +I  +    V E++P HP AN  G V+ PNVN+  E  DM  T R Y
Sbjct: 63  GQGTEKSFGVKPTEIRENTEDIVMEYNPTHPDANEEGYVQMPNVNMADEMIDMMTTLRTY 122

Query: 112 MANLQTIKQSHDMMTTTLDL 131
            AN+  +  S +M+T  L +
Sbjct: 123 DANVTAMNASKEMLTKALQI 142


>gi|149927796|ref|ZP_01916047.1| flagellar basal-body rod protein FlgC [Limnobacter sp. MED105]
 gi|149823418|gb|EDM82649.1| flagellar basal-body rod protein FlgC [Limnobacter sp. MED105]
          Length = 140

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 9/137 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L  S  +A   +  Q+ R+  ++ N+AN  T    P S  Y+ + + FE V+  +     
Sbjct: 3   LFNSFKLAGGAMQAQTTRLNTVASNLANVDTAAGDPNS-VYQARKVVFEAVLQKAAPGKA 61

Query: 61  -----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                V+VK I  D++   + FDP HP+A+  G V  PNVN + E  DM   +R Y  N 
Sbjct: 62  SLAENVQVKDIVEDKTEAKKMFDPKHPMADEDGYVYMPNVNAVEEMVDMLAASRSYQTNA 121

Query: 116 QTIKQSHDMMTTTLDLL 132
           + +  +  +M  TL++ 
Sbjct: 122 EVMNTAKQLMLKTLNMG 138


>gi|167645332|ref|YP_001682995.1| flagellar basal body rod protein FlgC [Caulobacter sp. K31]
 gi|167347762|gb|ABZ70497.1| flagellar basal-body rod protein FlgC [Caulobacter sp. K31]
          Length = 140

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 59/131 (45%), Positives = 79/131 (60%), Gaps = 2/131 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--EVMHGSGGVR 62
           +A+  IA S L  Q  RM++I+ENIANA +T    G DPYRR+   F+   +  G  GV 
Sbjct: 9   MATMAIAASALKAQQGRMRVIAENIANANSTARVAGGDPYRRQVPVFKPTTLKGGGEGVV 68

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           + K+  D   F   +DPG+P A+A G VK PNV+ LVE  DM+E  R Y AN+  I+ S 
Sbjct: 69  MAKVDPDMKDFGTAYDPGNPAADAKGYVKLPNVDTLVEALDMKEAQRAYEANMNVIETSR 128

Query: 123 DMMTTTLDLLR 133
            M + TLD+LR
Sbjct: 129 AMESRTLDILR 139


>gi|168698712|ref|ZP_02730989.1| Flagellar basal body rod protein [Gemmata obscuriglobus UQM 2246]
          Length = 144

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 10/139 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L A + I+ +G++ +  RM++I+ NIANA TT    G  PYRR+ + FEE++  + G   
Sbjct: 6   LFAGSAISGTGMSAERLRMEVIANNIANANTTRSANGG-PYRRQDVVFEELLGAAAGPFG 64

Query: 61  ------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                 V   +   D +       PGHP A+A G V+ PNV + +E  ++    R Y AN
Sbjct: 65  GPDLRGVVAVERVEDPTELPRVHQPGHPDADAEGFVRMPNVQLPIEMVNLLTATRAYEAN 124

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L+  +    M    L LLR
Sbjct: 125 LRAAQTFRQMNEQALVLLR 143


>gi|312115251|ref|YP_004012847.1| flagellar basal-body rod protein FlgC [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311220380|gb|ADP71748.1| flagellar basal-body rod protein FlgC [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 139

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 68/136 (50%), Positives = 91/136 (66%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L AS  IA SGL+ QS R+++ +EN+AN+ +TG TPG+ PY RK +SF++ +  + G
Sbjct: 3   MDNLSASLAIAGSGLSAQSQRIRVATENLANSESTGKTPGALPYTRKILSFDQELDAATG 62

Query: 61  VRVKKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             +  IG    D+S +  E  PGHP A+A G VK PNVNVLVE AD+RE  R Y ANLQ 
Sbjct: 63  AELVIIGDVDADRSPYRIENIPGHPAADAQGNVKLPNVNVLVELADIREGTRSYEANLQV 122

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ   + T T+D+L+
Sbjct: 123 IKQVRHLETLTIDILK 138


>gi|317011794|gb|ADU85541.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           SouthAfrica7]
          Length = 161

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQIIPYEDPLDESDDTPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|59712483|ref|YP_205259.1| flagellar basal body rod protein FlgC [Vibrio fischeri ES114]
 gi|197336337|ref|YP_002156702.1| flagellar basal-body rod protein FlgC [Vibrio fischeri MJ11]
 gi|24459275|gb|AAL86628.1| FlgC [Vibrio fischeri ES114]
 gi|59480584|gb|AAW86371.1| flagellar proximal rod protein FlgC [Vibrio fischeri ES114]
 gi|197317827|gb|ACH67274.1| flagellar basal-body rod protein FlgC [Vibrio fischeri MJ11]
          Length = 138

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +  ++ Y+ +   F   +  +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNMANADSVSSS-AAETYKARQAVFGAELSKAKYKQD 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I   Q     E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  HTVPVKVLGIVESQKPLRAEYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+ +TL + +
Sbjct: 122 VADASKQMLQSTLRMGQ 138


>gi|210135737|ref|YP_002302176.1| flagellar basal body rod protein FlgC [Helicobacter pylori P12]
 gi|210133705|gb|ACJ08696.1| flagellar basal-body rod protein FlgC [Helicobacter pylori P12]
          Length = 161

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|89075493|ref|ZP_01161904.1| Putative flagellar basal body rod protein FlgC [Photobacterium sp.
           SKA34]
 gi|89048765|gb|EAR54336.1| Putative flagellar basal body rod protein FlgC [Photobacterium sp.
           SKA34]
          Length = 138

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F   ++ +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSS-AEETYKARHPIFAAALNSASYHQS 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+VK I         E++P HP+ANA G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  SSVPVQVKGIIESDKPLSAEYNPEHPMANAEGFIYKPNVNVMEEMANMISASRSYQNNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLMKTLQMGK 138


>gi|86153269|ref|ZP_01071473.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|121612733|ref|YP_001000227.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005182|ref|ZP_02270940.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|85842995|gb|EAQ60206.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|87250029|gb|EAQ72987.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 164

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            E++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NEQINKDNNFLKYENPLNDPSSPEEAKPPIQSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|109948140|ref|YP_665368.1| flagellar basal body rod protein FlgC [Helicobacter acinonychis
           str. Sheeba]
 gi|109715361|emb|CAK00369.1| flagellar basal-body rod protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 161

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEVLNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQIIPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|317153716|ref|YP_004121764.1| flagellar basal-body rod protein FlgC [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943967|gb|ADU63018.1| flagellar basal-body rod protein FlgC [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 145

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 52/146 (35%), Positives = 74/146 (50%), Gaps = 16/146 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           MD++  +  I  SGL  Q A + +IS N+AN RTT    G  PY+RK++SFE     S  
Sbjct: 1   MDFM-TALDIGASGLKAQRATLNVISMNMANMRTTKTLEGG-PYQRKSVSFESTPVYSPF 58

Query: 60  -------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV+V  +  D+  F + ++P HP AN  G V YP++NV+ E  +M  
Sbjct: 59  DEAMNNQLNRELHGVKVLGVTADERPFKQVYEPHHPDANDLGYVYYPDINVVEEMTNMMN 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLL 132
             R Y AN+QTI+    M    L + 
Sbjct: 119 ATRGYEANVQTIESVKQMFNKALQIG 144


>gi|323498422|ref|ZP_08103418.1| flagellar basal body rod protein FlgC [Vibrio sinaloensis DSM
           21326]
 gi|323316495|gb|EGA69510.1| flagellar basal body rod protein FlgC [Vibrio sinaloensis DSM
           21326]
          Length = 138

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKAKYGND 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  HTVPVKVMGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLLRTLQMGQ 138


>gi|307638243|gb|ADN80693.1| Flagellar basal-body rod protein [Helicobacter pylori 908]
 gi|325996836|gb|ADZ52241.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
 gi|325998428|gb|ADZ50636.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
          Length = 161

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 71/160 (44%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F            
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFRAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  ITQNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|323495379|ref|ZP_08100456.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
 gi|323310302|gb|EGA63489.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
          Length = 138

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKAKYGRD 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  HTVPVKVLGIVESDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 LADASKQMLLRTLQMGQ 138


>gi|330445346|ref|ZP_08308998.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489537|dbj|GAA03495.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 138

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F   +  +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSS-AEETYKARHPIFAAALESASYNRE 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+VK I   +     E++P HP+ANA G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  DSVPVQVKGIVESERPLTAEYNPDHPMANAQGFIYKPNVNVMEEMANMISASRSYQNNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLMKTLQMGK 138


>gi|308064340|gb|ADO06227.1| flagellar basal body rod protein FlgC [Helicobacter pylori Sat464]
          Length = 161

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQIAPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|56460254|ref|YP_155535.1| flagellar basal body rod protein [Idiomarina loihiensis L2TR]
 gi|56179264|gb|AAV81986.1| Flagellar basal body rod protein [Idiomarina loihiensis L2TR]
          Length = 150

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 19/148 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L    ++  S ++ QS R+   + N+ANA +   +   + YR +   F   +  +     
Sbjct: 3   LFNIFNVTGSAMSAQSVRLNTTASNLANANSISSSID-ETYRARNPVFATALADASGNYK 61

Query: 59  -------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GV+V  I   Q     E+ P HP+A+ SG +  PNVN + E A+M 
Sbjct: 62  GNSLTNQTQAGQEAGVKVMGIVESQDPLQIEYAPNHPMADESGYIYRPNVNTMEEMANMI 121

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +R Y  N+Q    +  M    L L +
Sbjct: 122 SASRSYQTNVQVADTAKTMTQRLLRLGQ 149


>gi|254780090|ref|YP_003058197.1| flagellar basal body rod protein FlgC [Helicobacter pylori B38]
 gi|254002003|emb|CAX30262.1| Flagellar basal-body rod protein FlgC [Helicobacter pylori B38]
          Length = 161

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIAN  TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANVNTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQIIPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|88858145|ref|ZP_01132787.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
 gi|88819762|gb|EAR29575.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
          Length = 140

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 9/138 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L     I+ +G++ QS R+   + N++NA +   +     YR +   F   +  +     
Sbjct: 3   LFNVFDISATGMSAQSVRLNTTASNMSNANSVSSSID-QTYRARHPVFAAELTKAAASQQ 61

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV+V  I         EF+P HP+A+  G +   NVNV+ E A+M   +R Y  N+
Sbjct: 62  GESVGVKVLGIVESDKPLQIEFNPTHPMADKDGFIYKSNVNVVEEMANMISASRAYQTNV 121

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    +  M++ T+ L +
Sbjct: 122 QLADAAKSMLSKTIMLGQ 139


>gi|51894141|ref|YP_076832.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51857830|dbj|BAD41988.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 147

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 72/146 (49%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           +  +   + S L  +  RM +I+ N+AN RTT    G  PYRR+T+  EE  +       
Sbjct: 3   MFQAMEASASALTAERLRMDVIANNLANYRTTRTAEGG-PYRRRTVVVEERPNTFASELA 61

Query: 57  --------GSGGVRVKKIGVDQSTFVEEFDPGHPVANA-SGIVKYPNVNVLVETADMRET 107
                      GVRV +I  D S F E  DP HP A+  +GIV+ PNV++L E  D+   
Sbjct: 62  RQAGRPAEPGLGVRVTQIVEDPSPFKEVHDPTHPDADPVTGIVRLPNVDLLQEITDLMLA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R+Y ANL     + +M    L++ R
Sbjct: 122 QRMYDANLTAFNAAKNMALRALEIGR 147


>gi|308185345|ref|YP_003929478.1| flagellar basal body rod protein FlgC [Helicobacter pylori SJM180]
 gi|308061265|gb|ADO03161.1| flagellar basal body rod protein FlgC [Helicobacter pylori SJM180]
          Length = 161

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 71/160 (44%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F            
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFRAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQIIPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|315636296|ref|ZP_07891546.1| flagellar basal-body rod protein FlgC [Arcobacter butzleri JV22]
 gi|315479385|gb|EFU70068.1| flagellar basal-body rod protein FlgC [Arcobacter butzleri JV22]
          Length = 154

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 23/151 (15%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
                ++A SG++ Q  R+ ++S NIANA+TT    G  PY+++ + FE+V+  +     
Sbjct: 3   FFDGYNVATSGMSAQRTRINVVSANIANAKTTHTAEGG-PYKKQEVVFEDVLVANTNKRT 61

Query: 60  ------------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                             GV V+KI    +  V ++DP HP AN  G V YP++N ++E 
Sbjct: 62  NTNDVETTNSPLSESSLRGVGVRKIIQSDAKPVLKYDPTHPDANEKGYVAYPDINPVIEM 121

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            ++ E  R Y AN+ +      + + TL++L
Sbjct: 122 VNLIEAMRSYEANVTSFNTHRGIDSKTLEIL 152


>gi|90579907|ref|ZP_01235715.1| flagellar basal body rod protein [Vibrio angustum S14]
 gi|90438792|gb|EAS63975.1| flagellar basal body rod protein [Vibrio angustum S14]
          Length = 138

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F   ++ +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSS-AEETYKARHPIFAAALNSASYHQS 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+VK I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  SSVPVQVKGIVESDKPLSAEYNPEHPMANVEGFIYKPNVNVMEEMANMISASRSYQNNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLMKTLQMGK 138


>gi|300024608|ref|YP_003757219.1| flagellar basal-body rod protein FlgC [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526429|gb|ADJ24898.1| flagellar basal-body rod protein FlgC [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 139

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/135 (54%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
           D LIAS   A SGL  QS+RM+++SENIANA TTG TPG+DPY+RKTISF+ VM  + G 
Sbjct: 3   DPLIASTRSAASGLFAQSSRMRVVSENIANASTTGKTPGADPYQRKTISFQSVMDENAGA 62

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+V KI  D++ F  ++ PG+  A+++G+VK PNVN+LVE ADMRE +R Y AN Q I
Sbjct: 63  DLVQVDKISHDETPFETQYMPGNAAADSNGMVKMPNVNMLVELADMREASRSYTANTQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           KQ  ++++ T+DL+R
Sbjct: 123 KQVRELVSMTIDLMR 137


>gi|86151838|ref|ZP_01070052.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|148925898|ref|ZP_01809585.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157414808|ref|YP_001482064.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205355383|ref|ZP_03222154.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|283954185|ref|ZP_06371710.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283955949|ref|ZP_06373439.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|315124050|ref|YP_004066054.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841467|gb|EAQ58715.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|145844884|gb|EDK21988.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157385772|gb|ABV52087.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205346617|gb|EDZ33249.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|283792609|gb|EFC31388.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283794464|gb|EFC33208.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 414]
 gi|284925790|gb|ADC28142.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315017772|gb|ADT65865.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315931721|gb|EFV10676.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 164

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            E++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|86149025|ref|ZP_01067257.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88596860|ref|ZP_01100096.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218562179|ref|YP_002343958.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85840383|gb|EAQ57640.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88190549|gb|EAQ94522.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112359885|emb|CAL34673.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315928561|gb|EFV07858.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 164

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            E++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTISQSAIDLLR 163


>gi|307720251|ref|YP_003891391.1| flagellar basal-body rod protein FlgC [Sulfurimonas autotrophica
           DSM 16294]
 gi|306978344|gb|ADN08379.1| flagellar basal-body rod protein FlgC [Sulfurimonas autotrophica
           DSM 16294]
          Length = 164

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 33/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           M   + S  I+  GL+ Q  R+  IS NIANA+TT    G  PYRR+ + F+        
Sbjct: 1   MSNFLNSFDISGYGLSAQRVRVNTISSNIANAQTTRTDEGG-PYRRREVVFKAINFNDVY 59

Query: 54  -------------------------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                    V      V V K+  D S  + +F+P +P A+A+G
Sbjct: 60  NKALGENTQSAKYEDPLNEGEFGKKVNPAIMSVVVDKVIRDDSKPLMKFEPNNPDADANG 119

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N +VE +D+ E  R Y AN+   + + DM  + + LL+
Sbjct: 120 YVAYPNINPVVEMSDLVEATRSYQANVAAFQSAKDMANSAISLLQ 164


>gi|84388089|ref|ZP_00990985.1| flagellar basal body rod protein [Vibrio splendidus 12B01]
 gi|84377156|gb|EAP94026.1| flagellar basal body rod protein [Vibrio splendidus 12B01]
          Length = 137

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F   ++ +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSS-AEETYKARHAVFGAELNKARNSGH 61

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q 
Sbjct: 62  TVPVKVLGIVESDKPLSAEYNPDHPLANNEGYIYKPNVNVMEEMANMISASRAYQTNVQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
              S  M+  TL + +
Sbjct: 122 ADSSKQMLLRTLQMGQ 137


>gi|313683371|ref|YP_004061109.1| flagellar basal-body rod protein flgc [Sulfuricurvum kujiense DSM
           16994]
 gi|313156231|gb|ADR34909.1| flagellar basal-body rod protein FlgC [Sulfuricurvum kujiense DSM
           16994]
          Length = 164

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 33/163 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
            + S  I+  GL+ Q  R+  IS NIANA+TT    G  PYRR+ + F+ +         
Sbjct: 3   FLNSFDISGYGLSAQRVRVNTISANIANAQTTRTNEGG-PYRRQEVIFKAIDFNKVYNKA 61

Query: 56  ---------------HGSGG---------VRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
                           G  G         V V KI  D      +FDP HP A+A+G V 
Sbjct: 62  LENETSALEYSDPLKEGLAGLKPNPAIMSVVVDKISRDDKAPKMKFDPSHPDADANGYVA 121

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           YPN+N +VE AD+ E  R Y AN+   + + +M  + + +L++
Sbjct: 122 YPNINPVVEMADLVEATRSYQANVAAFESAKNMAGSAISILQN 164


>gi|208435438|ref|YP_002267104.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|308183713|ref|YP_003927840.1| flagellar basal body rod protein FlgC [Helicobacter pylori PeCan4]
 gi|208433367|gb|ACI28238.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|308065898|gb|ADO07790.1| flagellar basal body rod protein FlgC [Helicobacter pylori PeCan4]
          Length = 161

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 71/160 (44%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F            
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFRAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|283853239|ref|ZP_06370490.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. FW1012B]
 gi|283571344|gb|EFC19353.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. FW1012B]
          Length = 146

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 15/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---------F 51
           MD L  +  I +SG++ Q   M  IS N+AN +TT    G+ PY RK++          F
Sbjct: 1   MD-LFTALDIGSSGMSAQRTLMNTISMNLANIKTTRTVNGAGPYVRKSVMLESTPVDAPF 59

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            + M  +      GV+V  +  D   F  +++PGHP ANA G V YP++NV+ E A+M  
Sbjct: 60  SKAMQSAQDRDLAGVKVTGLVNDNRPFRMQYEPGHPDANADGYVAYPDINVVEEMANMIT 119

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y A+  +I    +M T  LD+ R
Sbjct: 120 AMRSYEASSSSIGTVKNMFTKALDIGR 146


>gi|239909138|ref|YP_002955880.1| flagellar basal-body rod protein FlgC [Desulfovibrio magneticus
           RS-1]
 gi|239799005|dbj|BAH77994.1| flagellar basal-body rod protein FlgC [Desulfovibrio magneticus
           RS-1]
          Length = 147

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 15/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---------F 51
           MD L  +  I +SG++ Q   M  IS N+AN +TT    G  PY RK++          F
Sbjct: 1   MD-LFTAMDIGSSGMSAQRTTMNTISMNLANIKTTRTVNGGGPYVRKSVMLESTPVDSPF 59

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            + M  +      GV+V  +  D   F  +++PGHP ANA G V YP++NV+ E A+M  
Sbjct: 60  SKAMQSAQDRDLAGVKVTSLVNDNRPFRMQYEPGHPDANADGYVAYPDINVVEEMANMIT 119

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y A+  +I    +M    L++ R
Sbjct: 120 AMRSYEASSSSIGTVKNMFNKALEIGR 146


>gi|304392508|ref|ZP_07374448.1| flagellar basal-body rod protein FlgC [Ahrensia sp. R2A130]
 gi|303295138|gb|EFL89498.1| flagellar basal-body rod protein FlgC [Ahrensia sp. R2A130]
          Length = 138

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/136 (52%), Positives = 96/136 (70%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  +A+SGLA QS R++++S+NIANA++T    G +PY+RKTI+F   +  +  
Sbjct: 1   MDALSAAMKVASSGLAAQSQRLEVVSQNIANAQSTSRVAGGEPYQRKTITFTSALDQANA 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V KIG D S+F  +FDP  P A+A G+VK PNVNVLVE ADMR+ NR Y +NLQ 
Sbjct: 61  AQMVDVDKIGRDPSSFSAKFDPSSPGADAKGMVKMPNVNVLVEMADMRDANRAYESNLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ  DM+T T+DL+R
Sbjct: 121 MKQVQDMVTATIDLMR 136


>gi|262394941|ref|YP_003286795.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
 gi|262338535|gb|ACY52330.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
          Length = 137

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GG- 60
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +  GG 
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMRGGD 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q 
Sbjct: 62  TVPVKVMGIVESDKPLSAEYNPDHPLANEEGYIYKPNVNVMEEMANMISASRAYQTNVQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
              S  M+  TL + +
Sbjct: 122 ADSSKQMLLRTLQMGQ 137


>gi|157738153|ref|YP_001490837.1| flagellar basal body rod protein FlgC [Arcobacter butzleri RM4018]
 gi|157700007|gb|ABV68167.1| flagellar basal body rod protein FlgC [Arcobacter butzleri RM4018]
          Length = 154

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 23/151 (15%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
                ++A SG++ Q  R+ ++S NIANA+TT    G  PY+++ + FE+V+  +     
Sbjct: 3   FFDGYNVATSGMSAQRTRINVVSANIANAKTTHTAEGG-PYKKQEVVFEDVLVANTNKRT 61

Query: 60  ------------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                             GV V+KI    +  V ++DP HP AN  G V YP++N ++E 
Sbjct: 62  NANDVETTNSPLSESSLRGVGVRKIIQSDAKPVLKYDPTHPDANEKGYVAYPDINPVIEM 121

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            ++ E  R Y AN+ +      + + TL++L
Sbjct: 122 VNLIEAMRSYEANVTSFNTHRGIDSKTLEIL 152


>gi|153213630|ref|ZP_01948903.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 1587]
 gi|153825350|ref|ZP_01978017.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-2]
 gi|153829337|ref|ZP_01982004.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 623-39]
 gi|183179563|ref|ZP_02957774.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-3]
 gi|229513843|ref|ZP_04403305.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TMA 21]
 gi|229522148|ref|ZP_04411565.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TM 11079-80]
 gi|229524194|ref|ZP_04413599.1| flagellar basal-body rod protein FlgC [Vibrio cholerae bv. albensis
           VL426]
 gi|229528796|ref|ZP_04418186.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 12129(1)]
 gi|254286492|ref|ZP_04961449.1| flagellar basal-body rod protein FlgC [Vibrio cholerae AM-19226]
 gi|258621047|ref|ZP_05716081.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM573]
 gi|258625275|ref|ZP_05720183.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM603]
 gi|261211324|ref|ZP_05925612.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC341]
 gi|262170823|ref|ZP_06038501.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
 gi|262191691|ref|ZP_06049867.1| flagellar basal-body rod protein FlgC [Vibrio cholerae CT 5369-93]
 gi|297580845|ref|ZP_06942770.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC385]
 gi|124115829|gb|EAY34649.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 1587]
 gi|148875178|gb|EDL73313.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 623-39]
 gi|149741034|gb|EDM55103.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-2]
 gi|150423441|gb|EDN15385.1| flagellar basal-body rod protein FlgC [Vibrio cholerae AM-19226]
 gi|183012974|gb|EDT88274.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-3]
 gi|229332570|gb|EEN98056.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 12129(1)]
 gi|229337775|gb|EEO02792.1| flagellar basal-body rod protein FlgC [Vibrio cholerae bv. albensis
           VL426]
 gi|229341073|gb|EEO06078.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TM 11079-80]
 gi|229349024|gb|EEO13981.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TMA 21]
 gi|258582448|gb|EEW07289.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM603]
 gi|258586435|gb|EEW11150.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM573]
 gi|260839279|gb|EEX65905.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC341]
 gi|261891899|gb|EEY37885.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
 gi|262032430|gb|EEY50992.1| flagellar basal-body rod protein FlgC [Vibrio cholerae CT 5369-93]
 gi|297534671|gb|EFH73507.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC385]
 gi|327484718|gb|AEA79125.1| Flagellar basal-body rod protein FlgC [Vibrio cholerae LMA3894-4]
          Length = 138

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L +  ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +        
Sbjct: 3   LFSVFNVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKARFNRD 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +  V+V  I       V EF+P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  PNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLLRTLQMGQ 138


>gi|225159033|ref|ZP_03725343.1| flagellar basal-body rod protein FlgC [Opitutaceae bacterium TAV2]
 gi|224802412|gb|EEG20674.1| flagellar basal-body rod protein FlgC [Opitutaceae bacterium TAV2]
          Length = 140

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 10/139 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L++     +S L  Q  R+ II++NIANA TT   P   PY+R+ +SFE  +    G   
Sbjct: 3   LLSGIGPTSSALNAQKTRLDIIAQNIANAHTTRG-PNGLPYQRQMVSFESELTNKLGQID 61

Query: 61  ------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                 VRV  +  D +     +DP HP A+ASG+V  PNVN+  E  D+   +R Y AN
Sbjct: 62  GVPLRSVRVSSVSGDTTAGQRVYDPQHPDADASGMVTMPNVNLAYEMVDLITASRTYEAN 121

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           LQ +K S  M    L++ R
Sbjct: 122 LQVVKNSRQMALKALEIGR 140


>gi|163789652|ref|ZP_02184090.1| Flagellar basal body rod protein FlgC [Carnobacterium sp. AT7]
 gi|159875184|gb|EDP69250.1| Flagellar basal body rod protein FlgC [Carnobacterium sp. AT7]
          Length = 145

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 12/140 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           +  S  I  SGL+++  ++  IS NIAN  TT    G  PY +K + FEE +       +
Sbjct: 3   IFDSMQINASGLSLERLKLDTISTNIANVNTTRTEDGEGPYLKKEVVFEESLKQVETSLN 62

Query: 57  GSG-----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           G G     GV+  +I  +    V E+DP HP AN  G V+  NVN+  E  DM  T R Y
Sbjct: 63  GQGTEKSFGVKPTEIRENTDDIVMEYDPTHPDANEEGYVQQSNVNMADEMIDMMTTLRTY 122

Query: 112 MANLQTIKQSHDMMTTTLDL 131
            AN+  +  S +M++  L +
Sbjct: 123 DANVTAMNASKEMLSKALQI 142


>gi|221636059|ref|YP_002523935.1| flagellar basal-body rod protein FlgC [Thermomicrobium roseum DSM
           5159]
 gi|221158060|gb|ACM07178.1| flagellar basal-body rod protein FlgC [Thermomicrobium roseum DSM
           5159]
          Length = 151

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 20/149 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           ++ +  ++ S L  Q  RM + + N+AN  TT  TP   PY R+ + F            
Sbjct: 3   ILETMRVSLSALTAQRVRMDVTASNLANVDTTR-TPQGGPYLRRQVVFATEQPSPFARLV 61

Query: 52  -------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                  E       GV+V  I VD+    E +DP HP A+A+GIV+YP+++V+ E  ++
Sbjct: 62  QTRTGLVETTPSAGRGVQVAGIVVDRRAVREVYDPTHPDADANGIVRYPDIDVVSEMTNL 121

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  +     M    L + R
Sbjct: 122 MAATRAYEANVTVLDALKTMAMRALSIGR 150


>gi|57167572|ref|ZP_00366712.1| flagellar basal-body rod protein FlgC [Campylobacter coli RM2228]
 gi|305433078|ref|ZP_07402234.1| flagellar basal-body rod protein FlgC [Campylobacter coli JV20]
 gi|57020694|gb|EAL57358.1| flagellar basal-body rod protein FlgC [Campylobacter coli RM2228]
 gi|304443779|gb|EFM36436.1| flagellar basal-body rod protein FlgC [Campylobacter coli JV20]
          Length = 164

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            E++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAQG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|91225871|ref|ZP_01260840.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
 gi|91189521|gb|EAS75797.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
          Length = 137

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GG- 60
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +  GG 
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMRGGD 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q 
Sbjct: 62  TVPVKVMGIVESDKPLNAEYNPDHPLANEEGYIYKPNVNVMEEMANMISASRAYQTNVQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
              S  M+  TL + +
Sbjct: 122 ADSSKQMLLRTLQMGQ 137


>gi|28897550|ref|NP_797155.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153839687|ref|ZP_01992354.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|260364609|ref|ZP_05777211.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|260878286|ref|ZP_05890641.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|260898116|ref|ZP_05906612.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|260901951|ref|ZP_05910346.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|5361006|gb|AAD42913.1|U12817_7 polar flagellar FlgC homolog [Vibrio parahaemolyticus]
 gi|28805762|dbj|BAC59039.1| polar flagellar FlgC [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746797|gb|EDM57785.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|308086105|gb|EFO35800.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|308090161|gb|EFO39856.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|308106781|gb|EFO44321.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|308115115|gb|EFO52655.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|328473455|gb|EGF44303.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus
           10329]
          Length = 137

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GG- 60
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +  GG 
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMRGGD 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q 
Sbjct: 62  TVPVKVLGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
              S  M+  TL + +
Sbjct: 122 ADSSKQMLLRTLQMGQ 137


>gi|149188064|ref|ZP_01866359.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
 gi|148838052|gb|EDL54994.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
          Length = 138

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L    ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F   +        
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSISSS-AKETYKARHAVFGAELSKAQYNRD 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S  V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  HSVPVKVLGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+ +TL + +
Sbjct: 122 VADASKQMLLSTLRMGQ 138


>gi|86146157|ref|ZP_01064483.1| flagellar basal body rod protein [Vibrio sp. MED222]
 gi|218708802|ref|YP_002416423.1| flagellar basal body rod protein FlgC [Vibrio splendidus LGP32]
 gi|85836104|gb|EAQ54236.1| flagellar basal body rod protein [Vibrio sp. MED222]
 gi|218321821|emb|CAV17789.1| Polar flagellar FlgC [Vibrio splendidus LGP32]
          Length = 137

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   ++ +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELNQARNSGH 61

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q 
Sbjct: 62  TVPVKVLGIVESDKPLNAEYNPDHPLANNEGYIYKPNVNVMEEMANMISASRAYQTNVQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
              S  M+  TL + +
Sbjct: 122 ADSSKQMLLRTLQMGQ 137


>gi|332702980|ref|ZP_08423068.1| flagellar basal-body rod protein FlgC [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553129|gb|EGJ50173.1| flagellar basal-body rod protein FlgC [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 147

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           MD++  +  +A SGL  +  ++ IIS N+AN  TT    G  PYRRKT+ F+     S  
Sbjct: 1   MDFM-TALDVAASGLTAKRTQLNIISSNLANINTTRTAEGG-PYRRKTVVFQTTGTRSPF 58

Query: 60  -------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV++  I  D   F    DPGHP A+  G V++P++NV+ E A M  
Sbjct: 59  DSAMMDAMERELKGVKISHITKDNRPFKIVNDPGHPDADEFGNVRFPDINVVEEMAHMIT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN  +++    M +  L + +
Sbjct: 119 AMRSYEANAASVESIKSMFSKALQIGQ 145


>gi|260772272|ref|ZP_05881188.1| flagellar basal-body rod protein FlgC [Vibrio metschnikovii CIP
           69.14]
 gi|260611411|gb|EEX36614.1| flagellar basal-body rod protein FlgC [Vibrio metschnikovii CIP
           69.14]
          Length = 138

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F   ++ +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSS-AKETYKARHAVFGAELNKARYHRD 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  PNVPVKVLGIVESNKPLNAEYNPDHPLANDEGFIYKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLLRTLQMGQ 138


>gi|262404542|ref|ZP_06081097.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC586]
 gi|262349574|gb|EEY98712.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC586]
          Length = 138

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L +  ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +     
Sbjct: 3   LFSVFNVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKARFNRE 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I       V EF+P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  PNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLLRTLQMGQ 138


>gi|57238273|ref|YP_178646.1| flagellar basal body rod protein FlgC [Campylobacter jejuni RM1221]
 gi|57167077|gb|AAW35856.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni RM1221]
 gi|315057945|gb|ADT72274.1| Flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 164

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 53/165 (32%), Positives = 75/165 (45%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F+        
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 56  -----HGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
                  +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NERINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|261253616|ref|ZP_05946189.1| flagellar basal-body rod protein FlgC [Vibrio orientalis CIP
           102891]
 gi|260937007|gb|EEX92996.1| flagellar basal-body rod protein FlgC [Vibrio orientalis CIP
           102891]
          Length = 138

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKAKYGRD 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V++  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  HTVPVKLMGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLLRTLQMGQ 138


>gi|94968682|ref|YP_590730.1| flagellar basal-body rod protein FlgC [Candidatus Koribacter
           versatilis Ellin345]
 gi|94550732|gb|ABF40656.1| flagellar basal-body rod protein FlgC [Candidatus Koribacter
           versatilis Ellin345]
          Length = 145

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 15/144 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L      +   +A +  R +I++ N+ANA TT    G  PYRRK + F            
Sbjct: 3   LFDQIRTSGGAMAAERLRAEIVAGNMANAETTRTAEGG-PYRRKQVIFSSAQPTFGMVLA 61

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                    GGVRV  I  D    V  ++PGHP ANA G+V YPN++ + ET D+    R
Sbjct: 62  KAGGEPAIGGGVRVLDIVQDSRDPVLRYEPGHPDANAEGMVAYPNIDPIEETVDLMSALR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y  N   ++ +  M+  +L++L+
Sbjct: 122 SYQLNASAVQAAKQMIQQSLEILK 145


>gi|238796902|ref|ZP_04640406.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
 gi|238719162|gb|EEQ10974.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
          Length = 121

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 4/122 (3%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGGVRVKKIGVDQS 71
           +A QS R+ + + N+ANA +    P   PYR + + F+         GGVRV  +     
Sbjct: 1   MAAQSKRLNVSASNMANADSIAG-PDGQPYRARQVIFQVDSAPGQEIGGVRVGDVVESTE 59

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                ++P +P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  +  MM  TL L
Sbjct: 60  PDRMVYEPANPLADDKGYVRMPNVNVVSEMVNTISASRSYQANVEVMNTAKSMMLKTLTL 119

Query: 132 LR 133
            +
Sbjct: 120 GQ 121


>gi|239995127|ref|ZP_04715651.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii ATCC
           27126]
          Length = 140

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L     I+++G+  ++ R+   + NIANA +   +   + YR +   F   +  +     
Sbjct: 3   LFNVMQISSTGMEAENVRLNTTASNIANANSVSSSYD-ETYRARHPVFATALQDAMRDQS 61

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV+VK I    +    E+ P +P+A+ +G +  PNVN++ E A+M   ++ Y  N+Q
Sbjct: 62  KGAGVQVKGIVESDAPLQMEYSPNNPMADENGYIYKPNVNIVEEMANMMSASKAYETNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  +    L L +
Sbjct: 122 VADTTKRIFRRVLQLGQ 138


>gi|332140544|ref|YP_004426282.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550566|gb|AEA97284.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 140

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L     I+++G+  ++ R+   + NIANA +   +   + YR +   F   +  +     
Sbjct: 3   LFNVMQISSTGMEAENVRLNTTASNIANANSVSSSYD-ETYRARHPVFATALQDAMRDQS 61

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV+VK I    +    E+ P +P+A+ +G +  PNVN++ E A+M   ++ Y  N+Q
Sbjct: 62  KGAGVQVKGIVESDAPLQVEYSPNNPMADENGYIYKPNVNIVEEMANMMSASKAYETNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  +    L L +
Sbjct: 122 VADTTKRIFRRVLQLGQ 138


>gi|15612531|ref|NP_224184.1| flagellar basal body rod protein FlgC [Helicobacter pylori J99]
 gi|4156087|gb|AAD07040.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99]
          Length = 161

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 71/160 (44%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F            
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFRAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQIIPYEDPLDEGDDNPLIPITSVVVDKIARDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|156973584|ref|YP_001444491.1| flagellar basal body rod protein FlgC [Vibrio harveyi ATCC
           BAA-1116]
 gi|156525178|gb|ABU70264.1| hypothetical protein VIBHAR_01287 [Vibrio harveyi ATCC BAA-1116]
          Length = 137

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GG- 60
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +  GG 
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMRGGD 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  NLQ 
Sbjct: 62  TVPVKVMGIVESDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
              S  M+  TL + +
Sbjct: 122 ADSSKQMLLRTLQMGQ 137


>gi|319944137|ref|ZP_08018415.1| flagellar basal-body rod protein FlgC [Lautropia mirabilis ATCC
           51599]
 gi|319742631|gb|EFV95040.1| flagellar basal-body rod protein FlgC [Lautropia mirabilis ATCC
           51599]
          Length = 149

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 18/150 (12%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+  ++ N+ANA T    P    Y+ + + F+  M     
Sbjct: 1   MSSLMNILPLAGSALSAQSQRLNTVASNLANADTVAG-PDGSVYKARQVVFKPAMVEARQ 59

Query: 56  ------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                         S GVRV  +  D +   + +DP +P ANA G V + NVNV+ E  +
Sbjct: 60  AAGARQWSTRGASASMGVRVVDVIEDPTPGKQTYDPKNPAANAEGYVMHSNVNVIEEMVN 119

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y  N++ +  +  +   TL + +
Sbjct: 120 MISASRSYQNNVEMMNTAQQLALKTLSIGQ 149


>gi|77918798|ref|YP_356613.1| flagellar basal-body rod protein FlgC [Pelobacter carbinolicus DSM
           2380]
 gi|77544881|gb|ABA88443.1| flagellar basal-body rod protein FlgC [Pelobacter carbinolicus DSM
           2380]
          Length = 143

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 14/145 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
           MD +  +  ++ S L+ Q  R+ +IS N+AN  TT  TP   PYR++ + F+   +    
Sbjct: 1   MD-IFTAMQVSASALSAQRTRLNVISGNLANVGTTR-TPEGGPYRKRDVVFQSSQNMFED 58

Query: 57  --------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GV V +I  +   F   + PGHP A+ +G++  PN+NV+ E  DM    
Sbjct: 59  HLQQAMDTNVQGVEVSRIQPNSRDFRTVYQPGHPDADENGMLTLPNINVMEEVVDMMTAM 118

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  IK +  M T  L++ R
Sbjct: 119 RSYEANISAIKSAQRMATKALEIGR 143


>gi|157165285|ref|YP_001467064.1| flagellar basal body rod protein FlgC [Campylobacter concisus
           13826]
 gi|112800440|gb|EAT97784.1| flagellar basal-body rod protein FlgC [Campylobacter concisus
           13826]
          Length = 166

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 34/164 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M YL     I+  GL+ Q  RM +IS NIANA+TT    G  PYRR+ + F+E+      
Sbjct: 1   MSYL-NDFDISGYGLSAQRFRMNVISSNIANAQTTRTAEGG-PYRRQEVIFKEMNFDKIL 58

Query: 56  ---------------------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V K+  D   F  ++DP HP ANA+G
Sbjct: 59  NDQLKNSQSLLDYENPLDDPSSPKNAHPALTSVIVDKVVRDDKDFQLKYDPSHPDANANG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            V +PN+N ++E AD+ E  R Y AN+ + + +  +  + + L+
Sbjct: 119 YVAFPNINPVIEMADLLEATRAYQANVASFQNAKTIAQSAISLI 162


>gi|307747446|gb|ADN90716.1| Flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni M1]
          Length = 164

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            E++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAVDLLR 163


>gi|206896029|ref|YP_002246681.1| flagellar basal-body rod protein FlgC [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206738646|gb|ACI17724.1| flagellar basal-body rod protein FlgC [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 134

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 6/133 (4%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGV 61
            +   IA S L  Q  RM +IS NIAN  TT  TP   PY RK +SF+ +M   +   GV
Sbjct: 4   FSLLRIAGSALTAQRFRMDVISSNIANLETTR-TPEGGPYHRKIVSFQSMMVGENQGQGV 62

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANAS-GIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +V ++  D S     +DP HP A+   G+V YP+++++ E  D+    R +  N   I  
Sbjct: 63  KVAQLTEDPSE-RLVYDPSHPDADPETGMVHYPDMDLITELTDLMSAQRSFEMNSNAIAI 121

Query: 121 SHDMMTTTLDLLR 133
           +  + T ++++ R
Sbjct: 122 ARQVYTKSMEIGR 134


>gi|153834459|ref|ZP_01987126.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|163802605|ref|ZP_02196497.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
 gi|148869155|gb|EDL68187.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|159173688|gb|EDP58507.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
          Length = 137

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GG- 60
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +  GG 
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMRGGD 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q 
Sbjct: 62  TVPVKVMGIVESDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
              S  M+  TL + +
Sbjct: 122 ADSSKQMLLRTLQMGQ 137


>gi|317014993|gb|ADU82429.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           Gambia94/24]
          Length = 161

 Score =  163 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 52/160 (32%), Positives = 71/160 (44%), Gaps = 31/160 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F            
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFRAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                      V V KI  D S  + ++DP HP ANA G V YP
Sbjct: 61  IAQNNQITPYEDPLDEGDDNPLIPITSVVVDKIARDDSEPLMKYDPSHPDANAQGYVAYP 120

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 NVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|242278628|ref|YP_002990757.1| flagellar basal-body rod protein FlgC [Desulfovibrio salexigens DSM
           2638]
 gi|242121522|gb|ACS79218.1| flagellar basal-body rod protein FlgC [Desulfovibrio salexigens DSM
           2638]
          Length = 147

 Score =  163 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 15/143 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---------FEEV 54
              +  I  SGL  Q   + ++S N+ANA+TT    G  PYRRK++S         FE  
Sbjct: 3   FFTALDIGASGLKAQREYLNVVSMNMANAKTTRTAEGG-PYRRKSVSMESSPVLSPFETA 61

Query: 55  MHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
           M+        GV V+ I  D   F E ++P HP A+  GIV+YP++NV+ E  +M   +R
Sbjct: 62  MNQQLNQQLRGVTVRGIVSDTRPFKEVYEPNHPDADKKGIVRYPDINVVEEMVNMITISR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLL 132
            Y AN Q +  +  M    L + 
Sbjct: 122 SYEANAQAVDSAKRMFNRALRIG 144


>gi|319787123|ref|YP_004146598.1| flagellar basal-body rod protein FlgC [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465635|gb|ADV27367.1| flagellar basal-body rod protein FlgC [Pseudoxanthomonas suwonensis
           11-1]
          Length = 135

 Score =  163 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 5/133 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GG 60
           +    +A S L  QS R+  I+ N+ANA     +P +  Y+     F+    GS     G
Sbjct: 4   LPIFDVAGSALQAQSVRLSTIASNLANADAVAGSPEA-VYKPLEPVFQAQASGSDPALTG 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV++I    +  V  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ I  
Sbjct: 63  VRVREIAQSDAPPVRRYEPGHPLADADGYVFAPDVDPVSQMVNMISASRSYQAGVEIINT 122

Query: 121 SHDMMTTTLDLLR 133
           + ++   TL + R
Sbjct: 123 AKELAIATLSMGR 135


>gi|224370789|ref|YP_002604953.1| FlgC [Desulfobacterium autotrophicum HRM2]
 gi|223693506|gb|ACN16789.1| FlgC [Desulfobacterium autotrophicum HRM2]
          Length = 165

 Score =  163 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 36/167 (21%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------ 54
           MD L+ S  I+ +GLA    +M +I+EN+AN  TT    G  PYRRK + F++       
Sbjct: 1   MD-LLDSMKISATGLAAHRTKMNVIAENLANVDTTRTADGG-PYRRKMVVFKDQALENFK 58

Query: 55  ---------------------------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA- 86
                                           GV V +I   Q  F   ++P HP A+  
Sbjct: 59  SVLEKNQQTNQVAQVEFSPIEVGKNDPQSRGTGVAVDEIVQSQEDFRLVYNPAHPDADPV 118

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G V  PNV+ L E ADM    R Y A++  I  +  M+   L+L +
Sbjct: 119 TGYVAMPNVDHLTEVADMIVAKRSYEASITAISNTKSMILKALELGK 165


>gi|284007175|emb|CBA72461.1| flagellar basal body rod protein FlgC [Arsenophonus nasoniae]
          Length = 135

 Score =  163 bits (414), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHG 57
           M  L +   I++S L+ QS R+ + + N+ANA +    P  +PYR K + F   E   +G
Sbjct: 1   MMSLFSIFEISSSALSAQSQRLNVSASNMANADSV-TGPNGEPYRAKQVVFSVSELSANG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            GGV V ++  D S F  E+ P HP+A+  G ++ PNV+V  E  +    +R Y AN++ 
Sbjct: 60  IGGVSVAQVVDDPSPFRLEYQPAHPLADQRGYIRKPNVDVTAEMINPISASRSYQANIEV 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  +M  TL L +
Sbjct: 120 MNTTKSLMQKTLTLGQ 135


>gi|260767771|ref|ZP_05876706.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|260617280|gb|EEX42464.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|315179397|gb|ADT86311.1| flagellar basal-body rod protein FlgC [Vibrio furnissii NCTC 11218]
          Length = 138

 Score =  163 bits (414), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +        
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSKARYNRD 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +  V+V  I         EF+P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  PNVPVKVLGIVESDKPLNAEFNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLLRTLQMGQ 138


>gi|90408058|ref|ZP_01216229.1| flagellar basal-body rod protein FlgC [Psychromonas sp. CNPT3]
 gi|90310815|gb|EAS38929.1| flagellar basal-body rod protein FlgC [Psychromonas sp. CNPT3]
          Length = 140

 Score =  163 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 9/138 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L     I+ +G++ QS R+   + N+ANA  +  +     YR +   F   ++ + G   
Sbjct: 3   LFRILDISATGMSAQSVRLNTTASNLANAN-SVSSSSEKTYRARHPVFAAELNKAKGALS 61

Query: 61  -----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                V+V  I    +    E+ P  P A+  G V + NVNV+ E A+M   +R Y  N+
Sbjct: 62  SSGVGVKVLGIVESDAPLAREYAPNSPSADKDGFVYHSNVNVMEEMANMISASRSYQTNV 121

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    +  M++ TL + +
Sbjct: 122 QIADAAKQMLSRTLQMGK 139


>gi|332994164|gb|AEF04219.1| flagellar basal-body rod protein FlgC [Alteromonas sp. SN2]
          Length = 140

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           L     I+++G+  ++ R+   + NIANA +   +   + YR +   F   +  + G   
Sbjct: 3   LFNVMSISSTGMEAENVRLNTTASNIANANSVSSSYD-ETYRARHPVFAAELQRAMGDQS 61

Query: 61  ----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V VK I    +    E+ P +P+A+  G +  PNVN++ E A+M   ++ Y  N+Q
Sbjct: 62  KGVGVEVKGIVESDAPLQVEYAPHNPMADEEGYIYKPNVNIVEEMANMMSASKAYETNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  +    L L +
Sbjct: 122 VADTTKRIFRRVLQLGQ 138


>gi|332296506|ref|YP_004438429.1| flagellar basal-body rod protein FlgC [Thermodesulfobium narugense
           DSM 14796]
 gi|332179609|gb|AEE15298.1| flagellar basal-body rod protein FlgC [Thermodesulfobium narugense
           DSM 14796]
          Length = 134

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---G 60
            + +  IA SGL  Q  +M + + N+ANA +         ++R+ +  +E     G   G
Sbjct: 2   FLRTLEIAGSGLTAQRLKMDVAANNLANAYSNVKDKNGQIFKRQIVELQESTGKDGSFLG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  I  D S     +DPG+P ANA G V+YPNVN + E   +   +R Y A+L  +  
Sbjct: 62  VKVAGIISDNSPPRMVYDPGNPEANADGYVEYPNVNPIREMVSLINASRSYEADLNVVSA 121

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD L+
Sbjct: 122 TKSMIGQTLDELK 134


>gi|237753202|ref|ZP_04583682.1| flagellar basal-body rod protein flgc proximal rod protein
           [Helicobacter winghamensis ATCC BAA-430]
 gi|229375469|gb|EEO25560.1| flagellar basal-body rod protein flgc proximal rod protein
           [Helicobacter winghamensis ATCC BAA-430]
          Length = 166

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 36/165 (21%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS-----FEEVMHGS 58
            ++S  I+  GL+ Q  R+ +IS NIANA TT    G  PYRR+ +      F++V++  
Sbjct: 2   FLSSFDISGYGLSAQRQRVNLISSNIANANTTRTDEGG-PYRRRELVLKAFDFDKVLNQK 60

Query: 59  ------------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V KI  D +    +++P HP AN+ G
Sbjct: 61  YEKSNNLLEYEDPLNEMDSFDEQRKPKPALMSVYVDKIVRDDTQPRMKYEPSHPDANSEG 120

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N +VE AD+ E ++ Y AN+   + + +M +T + + +
Sbjct: 121 YVAYPNINPVVEMADLIEASKAYQANVAVFQSAKNMASTAISMFQ 165


>gi|288573035|ref|ZP_06391392.1| flagellar basal-body rod protein FlgC [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288568776|gb|EFC90333.1| flagellar basal-body rod protein FlgC [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 140

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 9/137 (6%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---- 60
             S  +A S L      M  IS+N+AN  +   TP   PY R+   F++++   G     
Sbjct: 4   FKSIDVAASSLTAHRLWMDTISQNLANVNS-SRTPEGGPYVRRVPVFQQILDEIGEDGKV 62

Query: 61  ---VRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              V+V +I  D +T     + P HP A+  G V  PNV+V+ E ADM   +R Y ANL 
Sbjct: 63  KGGVKVVEIAKDTTTAPRLVYQPDHPDADQEGYVAMPNVSVVREMADMMVASRAYEANLA 122

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M T  LD+L+
Sbjct: 123 VTTSAKSMWTGALDILK 139


>gi|332297607|ref|YP_004439529.1| flagellar basal-body rod protein FlgC [Treponema brennaborense DSM
           12168]
 gi|332180710|gb|AEE16398.1| flagellar basal-body rod protein FlgC [Treponema brennaborense DSM
           12168]
          Length = 151

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           L  S +IA +G++V+  R  +IS+NIANA TT  TP    ++RK++    +         
Sbjct: 3   LFTSINIAATGMSVERLRTDVISDNIANASTTR-TPEGGKFQRKSVVLTPIAENPTFRNP 61

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
                       GVR+ KI  D +     +DP HP A      +G V+YPNVN++ E  D
Sbjct: 62  FVPADIDNGPGAGVRISKIVKDTAQGRMVYDPSHPDAIQSGPNAGYVEYPNVNIVNEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y AN   I+ S DM ++ L++ R
Sbjct: 122 LISASRAYEANSSVIQGSKDMFSSALEIAR 151


>gi|27363707|ref|NP_759235.1| flagellar basal body rod protein FlgC [Vibrio vulnificus CMCP6]
 gi|37679145|ref|NP_933754.1| flagellar basal body rod protein FlgC [Vibrio vulnificus YJ016]
 gi|320157111|ref|YP_004189490.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus MO6-24/O]
 gi|27359823|gb|AAO08762.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus CMCP6]
 gi|37197887|dbj|BAC93725.1| flagellar basal body rod protein FlgC [Vibrio vulnificus YJ016]
 gi|319932423|gb|ADV87287.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus MO6-24/O]
          Length = 138

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMYNRG 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 62  DTVPVKVLGIVESDKPLSAEYNPEHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLLRTLQMGQ 138


>gi|15642198|ref|NP_231830.1| flagellar basal body rod protein FlgC [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121586290|ref|ZP_01676080.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 2740-80]
 gi|121726545|ref|ZP_01679794.1| flagellar basal-body rod protein FlgC [Vibrio cholerae V52]
 gi|147675208|ref|YP_001217716.1| flagellar basal body rod protein FlgC [Vibrio cholerae O395]
 gi|153817070|ref|ZP_01969737.1| flagellar basal-body rod protein FlgC [Vibrio cholerae NCTC 8457]
 gi|153820804|ref|ZP_01973471.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|227082323|ref|YP_002810874.1| flagellar basal-body rod protein FlgC [Vibrio cholerae M66-2]
 gi|229507724|ref|ZP_04397229.1| flagellar basal-body rod protein FlgC [Vibrio cholerae BX 330286]
 gi|229512081|ref|ZP_04401560.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|229519217|ref|ZP_04408660.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC9]
 gi|229607228|ref|YP_002877876.1| flagellar basal body rod protein FlgC [Vibrio cholerae MJ-1236]
 gi|254849328|ref|ZP_05238678.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MO10]
 gi|255747102|ref|ZP_05421047.1| flagellar basal-body rod protein FlgC [Vibrio cholera CIRS 101]
 gi|262161354|ref|ZP_06030464.1| flagellar basal-body rod protein FlgC [Vibrio cholerae INDRE 91/1]
 gi|262167775|ref|ZP_06035477.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC27]
 gi|298500423|ref|ZP_07010228.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MAK 757]
 gi|9656755|gb|AAF95344.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121549556|gb|EAX59582.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 2740-80]
 gi|121630998|gb|EAX63377.1| flagellar basal-body rod protein FlgC [Vibrio cholerae V52]
 gi|126512338|gb|EAZ74932.1| flagellar basal-body rod protein FlgC [Vibrio cholerae NCTC 8457]
 gi|126521596|gb|EAZ78819.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|146317091|gb|ABQ21630.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O395]
 gi|227010211|gb|ACP06423.1| flagellar basal-body rod protein FlgC [Vibrio cholerae M66-2]
 gi|227014095|gb|ACP10305.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O395]
 gi|229343906|gb|EEO08881.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC9]
 gi|229352046|gb|EEO16987.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|229355229|gb|EEO20150.1| flagellar basal-body rod protein FlgC [Vibrio cholerae BX 330286]
 gi|229369883|gb|ACQ60306.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MJ-1236]
 gi|254845033|gb|EET23447.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MO10]
 gi|255735504|gb|EET90904.1| flagellar basal-body rod protein FlgC [Vibrio cholera CIRS 101]
 gi|262023840|gb|EEY42539.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC27]
 gi|262028665|gb|EEY47319.1| flagellar basal-body rod protein FlgC [Vibrio cholerae INDRE 91/1]
 gi|297541116|gb|EFH77170.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MAK 757]
          Length = 138

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           L +  ++  S ++ +S R+   S N+ANA +   +   D Y+ +   F   +        
Sbjct: 3   LFSVFNVTGSAMSAESVRLNTTSSNLANADSISSS-AKDTYKARHAVFGAELSKARFNRD 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +  V+V  I       V EF+P HP+AN  G +   NVNV+ E A+M   +R Y  N+Q
Sbjct: 62  PNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKSNVNVMEEMANMISASRSYQTNVQ 121

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 122 VADASKQMLLRTLQMGQ 138


>gi|224825775|ref|ZP_03698879.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
 gi|224601999|gb|EEG08178.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
          Length = 140

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 9/137 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
               + IA S +  Q+ R+  ++ N+ANA +   + G+  +R +   F  V  G+     
Sbjct: 3   FRDISRIAGSAMTAQTVRLNTVASNLANAESASGSEGA-AFRARKPVFATVYRGADSDGA 61

Query: 59  ---GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                V+V  +    S   +  +P +P+A+A G V YPNVN + E  DM   +R +  N+
Sbjct: 62  WQGASVQVLDVVKSDSPLRKVHEPSNPLADADGNVFYPNVNPVEEMTDMMSASRAFQTNV 121

Query: 116 QTIKQSHDMMTTTLDLL 132
           + + +   M    L L 
Sbjct: 122 EVLARVKTMQQDLLKLG 138


>gi|197122865|ref|YP_002134816.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter sp. K]
 gi|196172714|gb|ACG73687.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter sp. K]
          Length = 140

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 11/142 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           MD+L ++ +++ SGLA +  R+ + + N+ANA TT   P   PYRR     E V      
Sbjct: 1   MDFL-SALNVSASGLAAERVRVNLAASNLANAETTRG-PDGQPYRRLDPVLEAVPFDAAL 58

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GVRV  I   +      F P HP A+  G V  P+VN + E  ++    + Y
Sbjct: 59  GAAGPAPSGVRVAAIAEGEGPGRRVFSPAHPDADPDGFVTLPDVNPVHEIVNLMSAQKAY 118

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN   +     M    L++ R
Sbjct: 119 EANATAVDTLKTMAQRALEIAR 140


>gi|86157822|ref|YP_464607.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|220917656|ref|YP_002492960.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|85774333|gb|ABC81170.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|219955510|gb|ACL65894.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 140

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 11/142 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           MD+L ++ +++ SGLA +  R+ + + N+ANA TT   P   PYRR     E V      
Sbjct: 1   MDFL-SALNVSASGLAAERVRVNLAASNLANAETTRG-PDGQPYRRLDPVLEAVPFDAAL 58

Query: 56  ----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GVRV  I          F P HP A+  G V  P+VN + E  ++    + Y
Sbjct: 59  GAAGPAPSGVRVAAIAEGDGPGRRVFSPAHPDADPDGFVTLPDVNPVHEIVNLMSAQKAY 118

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN   +     M    L++ R
Sbjct: 119 EANATAVDTLKTMAQRALEIAR 140


>gi|126444366|ref|YP_001061244.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|134280640|ref|ZP_01767350.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|254299688|ref|ZP_04967137.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
 gi|125657216|gb|ABN48704.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei]
 gi|126223857|gb|ABN87362.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|134247662|gb|EBA47746.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|157809503|gb|EDO86673.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
          Length = 138

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
               A IA S ++ Q+ R+  I+ N+ANA +   T  +  YR +   F  +         
Sbjct: 3   FKDIAQIAGSAMSAQTVRLNTIASNLANADSASGTEDAT-YRARKPVFASIFQLDAQGEP 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  +        +   PGHP+A+A G V YPNVN + E  DM   +R Y  N++
Sbjct: 62  RGAAVQVLDVVKSTEPLRKVHQPGHPLADAEGNVLYPNVNPVEEMTDMLSASRAYSTNVE 121

Query: 117 TIKQSHDMMTTTLDLLR 133
            + + + M    L L +
Sbjct: 122 VLGRVNGMQLELLKLGQ 138


>gi|332284017|ref|YP_004415928.1| flagellar basal body rod protein FlgC [Pusillimonas sp. T7-7]
 gi|330427970|gb|AEC19304.1| flagellar basal body rod protein FlgC [Pusillimonas sp. T7-7]
          Length = 138

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 8/135 (5%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           +   IA S L  QS RM + + N+ANA +    P   PYR + + F+             
Sbjct: 5   SIFQIAGSALTAQSQRMNVTASNLANADSVAG-PDGQPYRARQVVFQMAPVAGQSQAAAV 63

Query: 66  IG-------VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            G          +    ++DP +P+AN  G V  PNV+V+ ET +M   +R Y AN++ I
Sbjct: 64  GGVRVAAVVESAAPPRLQYDPKNPLANDDGYVTMPNVDVVAETVNMISASRSYQANVEVI 123

Query: 119 KQSHDMMTTTLDLLR 133
             +  +M  TL + +
Sbjct: 124 NTAKSLMMRTLSIGQ 138


>gi|238782790|ref|ZP_04626819.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
 gi|238716213|gb|EEQ08196.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
          Length = 121

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 4/122 (3%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGGVRVKKIGVDQS 71
           +A QS R+ + + N+ANA +    P   PYR + + F+         GGVRV  +     
Sbjct: 1   MAAQSKRLNVSASNMANADSAVG-PDGQPYRARQVVFQVNSAPGQEIGGVRVSDVMESSD 59

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  +  MM  TL L
Sbjct: 60  PDRMVYEPGNPLADDKGYVRMPNVNVVSEMVNTISASRSYQANVEVLNTAKSMMLKTLTL 119

Query: 132 LR 133
            +
Sbjct: 120 GQ 121


>gi|322432998|ref|YP_004210247.1| flagellar basal-body rod protein FlgC [Acidobacterium sp. MP5ACTX9]
 gi|321165225|gb|ADW70929.1| flagellar basal-body rod protein FlgC [Acidobacterium sp. MP5ACTX9]
          Length = 148

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 18/149 (12%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M        I+ S L+ +  R ++I+ N+ANA TT    G  P++RK + F      S  
Sbjct: 1   MGP-FDMLQISGSALSAERQRSEVIAANMANAETTHTDTGG-PFKRKEVVFSSASDSSFH 58

Query: 59  --------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                         G VR+ +I  D +  V  ++PGHP A+  G V YP +N + E  D+
Sbjct: 59  LTFAKTGGLSGKTPGTVRISQIVDDTAAPVMRYEPGHPDADKDGFVAYPAINPVQEMVDL 118

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             + R Y  N   +  +  M+  ++D+L+
Sbjct: 119 MGSTRAYQLNASAVSAAKQMIQQSIDILK 147


>gi|220904841|ref|YP_002480153.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869140|gb|ACL49475.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 145

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           MD++  +  I+ SGLA    R+  IS N+ANA+TT  TP   PYRR+++  +        
Sbjct: 1   MDFM-TAFDISASGLAADRTRINTISMNLANAKTTR-TPLGGPYRRRSVVQQTADVDDPF 58

Query: 56  ---------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GVRV  + +D   F   ++PG+P ANA G V YP++NV+ E A++  
Sbjct: 59  SVHMRSALDRAVKGVRVMAVTMDNRPFKRVYEPGNPDANAEGYVMYPDINVVEEMANLMT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R + AN+ T+     M    L++ +
Sbjct: 119 AQRNFEANVTTVDAIKGMYVKALEIGK 145


>gi|170748652|ref|YP_001754912.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655174|gb|ACB24229.1| flagellar basal-body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
          Length = 135

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/134 (40%), Positives = 78/134 (58%), Gaps = 3/134 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-- 60
               S  +A +GL  QS RM+II+ENIANA +   + G+ PYRRK  +F   +    G  
Sbjct: 2   EFTKSLAVAAAGLKAQSGRMRIIAENIANADSAPASAGAQPYRRKIPTFTSHLDDETGAR 61

Query: 61  -VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            V   ++  D S F  +++PG+P A+A G+V+ PNVN L+E  D+RE  R Y ANL  I 
Sbjct: 62  LVEAGRVKRDPSAFRTKYEPGNPAADAQGVVQMPNVNALIENMDLREAQRSYEANLNMIS 121

Query: 120 QSHDMMTTTLDLLR 133
            +  M+  TL +L+
Sbjct: 122 ATRKMLAQTLGILK 135


>gi|110677659|ref|YP_680666.1| flagellar basal body rod protein FlgC [Roseobacter denitrificans
           OCh 114]
 gi|163733139|ref|ZP_02140583.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och
           149]
 gi|109453775|gb|ABG29980.1| flagellar basal-body rod protein FlgC [Roseobacter denitrificans
           OCh 114]
 gi|161393674|gb|EDQ17999.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och
           149]
          Length = 129

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 9/135 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M     S  +  SGL  Q+ R++ +SENI+NA T G       YRRK +SFE    G G 
Sbjct: 1   MSEFSKSLDVTTSGLKAQATRLRHLSENISNADTPG-------YRRKLVSFETAFGGQGV 53

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V   ++ +DQST    +DP HP+A+ SG     NV++L+E +D RE  R Y ANL+  
Sbjct: 54  STVETSRVRLDQSTLERVYDPSHPMADESGYFDGSNVDLLIELSDAREAQRSYEANLKVF 113

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+  M ++ ++LLR
Sbjct: 114 EQTRKMSSSLMELLR 128


>gi|21672602|ref|NP_660669.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008458|sp|Q8K9K8|FLGC_BUCAP RecName: Full=Flagellar basal-body rod protein flgC
 gi|21623233|gb|AAM67880.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 136

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFE-EVMHGS--G 59
           L+   +IA S ++ QS ++ +I+ N+ANA +     G   PY  K + F+ + +  S  G
Sbjct: 3   LLNILNIAGSAMSAQSEKINVIASNLANAESIVCKDGKFYPYIAKKVIFKLDPLKNSLIG 62

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  I  D +     +DP +P++N +G V   NVN + ET +    +R Y AN++ +K
Sbjct: 63  GVKVFSIINDLNPMKLIYDPSNPLSNKNGYVLQTNVNPVSETINHISASRSYQANVEVLK 122

Query: 120 QSHDMMTTTLDLL 132
            +  M+  TL + 
Sbjct: 123 TAKSMIMKTLSIG 135


>gi|153951079|ref|YP_001398445.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152938525|gb|ABS43266.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 164

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 53/165 (32%), Positives = 76/165 (46%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIAN  TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMSVISSNIANVNTTRTAEGG-PYRRREVIFKATDFDKLL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            E++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NEQINKNNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|296531769|ref|ZP_06894591.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
 gi|296267908|gb|EFH13713.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
          Length = 146

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 55/134 (41%), Positives = 79/134 (58%), Gaps = 3/134 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-- 60
            L  +   A SG+  Q+ RM++ +ENIANA +T   PG D YRRK I+F+  +  + G  
Sbjct: 12  PLTQAMATAASGMNTQATRMRVSAENIANASSTAAVPGGDAYRRKLITFDRAVDRATGAQ 71

Query: 61  -VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            VR+  I  D   F  ++DP HP A+  G VK PNV+ LVE AD+R   R Y A++  ++
Sbjct: 72  LVRMDSIRNDPRDFRTQYDPAHPAADERGYVKLPNVDTLVEQADLRAAGRSYEASMAVLQ 131

Query: 120 QSHDMMTTTLDLLR 133
           Q+  +   TLD+LR
Sbjct: 132 QARALYGKTLDILR 145


>gi|219681697|ref|YP_002468083.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471393|ref|ZP_05635392.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           LSR1 (Acyrthosiphon pisum)]
 gi|219624540|gb|ACL30695.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 136

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFE---EVMHGSG 59
           L+   +IA S +  QS ++ +I+ N+AN  +T    G   PY  K + F          G
Sbjct: 3   LLNIFNIAGSAMIAQSQKLNVIASNLANMDSTIYKNGKFYPYIAKQVVFSLDTSKNSKIG 62

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV++  I  D S     +DP +P+AN  G +   NVN + E  +     R Y AN++ +K
Sbjct: 63  GVKISAIIDDPSPMKLIYDPNNPMANNKGYILASNVNPITEMVNNIAAARSYQANIEVLK 122

Query: 120 QSHDMMTTTLDL 131
            +  M+  TL +
Sbjct: 123 TAKSMIMKTLTI 134


>gi|325288776|ref|YP_004264957.1| flagellar basal-body rod protein FlgC [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324964177|gb|ADY54956.1| flagellar basal-body rod protein FlgC [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 160

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 66/157 (42%), Gaps = 27/157 (17%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANART-----TGDTPGSDPYRRKTISFEEVMHGS 58
           L +   I+ SGL  Q  RM +IS NIAN  T     T       PYRR+   F      +
Sbjct: 3   LFSGMDISASGLTAQRLRMDLISSNIANMNTNHTEATTAAGNPIPYRRQMAVFSTRNSPN 62

Query: 59  ---------------GGVRVKKIGVDQSTFVEEFDPGHPVANAS-------GIVKYPNVN 96
                           GV V +I  D+S F  E+DP  P A          G V++PNVN
Sbjct: 63  DFLSAFRSAGESEVGQGVSVTQILEDESPFKMEYDPESPEAAKVAEEGVPVGYVRHPNVN 122

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++ E  DM   +R Y AN+     S  +    L++ +
Sbjct: 123 IVQEMIDMLSASRSYEANVTAFNASKAIAAKALEIGK 159


>gi|242309757|ref|ZP_04808912.1| flagellar basal body rod protein FlgC [Helicobacter pullorum MIT
           98-5489]
 gi|239523758|gb|EEQ63624.1| flagellar basal body rod protein FlgC [Helicobacter pullorum MIT
           98-5489]
          Length = 166

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 36/165 (21%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS-----FEEVMHGS 58
            ++S  I+  GL+ Q  R+ +IS NIANA TT    G  PYRR+ +      F++V++  
Sbjct: 2   FLSSFDISGYGLSAQRQRVNLISSNIANANTTRTDEGG-PYRRRELILKAFNFDKVLNQK 60

Query: 59  ------------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V KI  D S    +++P HP AN+ G
Sbjct: 61  YENSNNLLKYEDPLDEMDSFDEQREPKPTLMSVYVDKIVRDDSQPKMKYEPSHPDANSEG 120

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N +VE AD+ E  + Y AN+   + + +M TT + + +
Sbjct: 121 YVAYPNINPVVEMADLIEATKAYQANVAAFQSAKNMATTAISMFQ 165


>gi|15616944|ref|NP_240157.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219682252|ref|YP_002468636.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|11386805|sp|P57420|FLGC_BUCAI RecName: Full=Flagellar basal-body rod protein flgC
 gi|25298910|pir||C84969 flagellar basal-body rod protein flgC [imported] - Buchnera sp.
           (strain APS)
 gi|10039009|dbj|BAB13043.1| flagellar basal-body rod protein flgC [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621985|gb|ACL30141.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|311086076|gb|ADP66158.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           LL01 (Acyrthosiphon pisum)]
 gi|311086647|gb|ADP66728.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|311087233|gb|ADP67313.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
 gi|311087752|gb|ADP67831.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           JF98 (Acyrthosiphon pisum)]
          Length = 136

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFE---EVMHGSG 59
           L+   +IA S +  QS ++ +I+ N+AN  +T    G   PY  K + F          G
Sbjct: 3   LLNIFNIAGSAMIAQSQKLNVIASNLANMDSTIYKNGKFYPYIAKQVVFSLDTAKNSKIG 62

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV++  I  D S     +DP +P+AN  G +   NVN + E  +     R Y AN++ +K
Sbjct: 63  GVKISAIIDDPSPMKLIYDPNNPMANNKGYILASNVNPITEMVNNIAAARSYQANIEVLK 122

Query: 120 QSHDMMTTTLDL 131
            +  M+  TL +
Sbjct: 123 TAKSMIMKTLTI 134


>gi|224373713|ref|YP_002608085.1| flagellar basal body rod protein FlgC [Nautilia profundicola AmH]
 gi|223589296|gb|ACM93032.1| flagellar basal-body rod protein FlgC [Nautilia profundicola AmH]
          Length = 165

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 34/163 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
              S  I+  GL+ Q  R+ IISENIANA TT    G  PYRRK + F+ V         
Sbjct: 3   FFNSFDISGYGLSAQRFRINIISENIANANTTRTDEGG-PYRRKEVIFKAVPFEEQLNQE 61

Query: 56  ----------------HGSGGVRVKKIGVDQ---------STFVEEFDPGHPVANASGIV 90
                            G      K               S  + ++DP +P A+A+G V
Sbjct: 62  IEQNSKFHQYENPLDEEGENYAVAKPPIETVVVDKVVRDDSKPILKYDPSNPDADANGYV 121

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            YPN+N ++E AD+ E  R Y AN+   + +  M  + +++L+
Sbjct: 122 AYPNINPVIEMADLLEATRAYQANVAAFQSAKTMANSAINILQ 164


>gi|295097205|emb|CBK86295.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 134

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---VMHGSGG 60
           L +   I+ S +A QS R+ + + N+ANA +    P   PYR + + FE       G GG
Sbjct: 3   LFSVFDISGSAMAAQSKRLNVSASNMANADSVAG-PDGQPYRARQVMFEADTSAGQGIGG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  +    +     ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  
Sbjct: 62  VRVSDVVESTAPDRLVYEPGNPLADEQGYVRMPNVNVVNEMVNTISASRSYQANVEVMNS 121

Query: 121 SHDMMTTTLDLLR 133
           +  +M  TL L +
Sbjct: 122 ARALMQKTLTLGQ 134


>gi|258404782|ref|YP_003197524.1| flagellar basal-body rod protein FlgC [Desulfohalobium retbaense
           DSM 5692]
 gi|257797009|gb|ACV67946.1| flagellar basal-body rod protein FlgC [Desulfohalobium retbaense
           DSM 5692]
          Length = 142

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 49/140 (35%), Positives = 66/140 (47%), Gaps = 12/140 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           L  +  I+ S +  QS RM   S N+AN  TT    G +PY RK++              
Sbjct: 3   LFTAMDISASAMTAQSLRMNAASSNLANTETTRTASG-EPYYRKSVVLSPKNSFDDELAS 61

Query: 54  -VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
            +  G  GV V  I  DQ    + +DPGHP AN  G V  P++NVL E  D+    R Y 
Sbjct: 62  RLPEGVAGVEVAAIRQDQEALRDVYDPGHPDANGEGYVTMPDINVLEEMTDIMAATRAYE 121

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN+ +IK S  M    L++ 
Sbjct: 122 ANVTSIKASQRMAVKALEIG 141


>gi|119503642|ref|ZP_01625725.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2080]
 gi|119460704|gb|EAW41796.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2080]
          Length = 134

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---G 60
           L  S  IA + L+ Q+ R+  I+ N+ANA +   T   D ++ +   F+ V+ G     G
Sbjct: 3   LFDSMSIAGTALSAQTTRINTIASNMANANSVSST-AEDTFKARAPIFQAVLEGESDQLG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  I        +EF+P HP+AN  G +  P+++V  + A+M   +R + + ++ I  
Sbjct: 62  VRVTSIEEVGGEARQEFEPAHPLANEEGFIYKPDIDVTQQMANMMSASRSFQSAIEVINT 121

Query: 121 SHDMMTTTLDLLR 133
           S  +   TL L +
Sbjct: 122 SKQLALRTLTLGK 134


>gi|218887374|ref|YP_002436695.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758328|gb|ACL09227.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 145

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 71/147 (48%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---------F 51
           MD++  +  I  S L  +   M IIS N+AN +TT    G  PYRRKT           F
Sbjct: 1   MDFM-TAIDIGASALNAERTNMNIISMNLANVKTTRTEQGG-PYRRKTTIMAAQDIDDPF 58

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            + M G+      GVRV  +  D       ++PGHP A+  G V YP++NV+ E A +  
Sbjct: 59  AKHMQGALDRELKGVRVMHVATDSRPLKRVYEPGHPDADQDGFVAYPDINVVEEMASLMT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+ TI     M T  L++ R
Sbjct: 119 AQRGYEANVTTIDTVKAMYTKALEISR 145


>gi|237751239|ref|ZP_04581719.1| flagellar basal body rod protein FlgC [Helicobacter bilis ATCC
           43879]
 gi|229372605|gb|EEO22996.1| flagellar basal body rod protein FlgC [Helicobacter bilis ATCC
           43879]
          Length = 163

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 33/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
            +++  I+  GL+ Q  R+ +IS NIANA TT    G  PYRR+ + F            
Sbjct: 2   FMSTFDISGYGLSAQRVRVNVISANIANANTTRTDEGG-PYRRQEVVFRAFDFNKQLNKR 60

Query: 54  -------------VMHGSGG---------VRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
                        +  G+ G         V + KI  D +  + ++DP HP ANA G V 
Sbjct: 61  LAKDNNLVEYKDPLEEGAYGKKPVPPITSVYIDKIVRDDNKPLMKYDPTHPDANAQGYVA 120

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           YPNVN +VE AD+ E  R Y AN+   + + +M +  + + +
Sbjct: 121 YPNVNPVVEMADLVEATRAYQANVAAFQSAKNMASNAITMFQ 162


>gi|296274007|ref|YP_003656638.1| flagellar basal-body rod protein FlgC [Arcobacter nitrofigilis DSM
           7299]
 gi|296098181|gb|ADG94131.1| flagellar basal-body rod protein FlgC [Arcobacter nitrofigilis DSM
           7299]
          Length = 153

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 22/151 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
                +IA+SG++ Q  R+ ++S NIANA+TT  T G  PY+++ + F+E++        
Sbjct: 3   FFDGYNIASSGMSAQRTRINVVSANIANAKTTHSTDGG-PYKKQNVVFQEMLLSENEKLK 61

Query: 56  -------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                            GV +K+I   +   + +F+P HP ANA G V YPN+N ++E  
Sbjct: 62  ANDNQDKQSTLPSKNLSGVGIKQIVESKDKPIMKFEPDHPDANADGYVAYPNINPVIEMV 121

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+ E  R Y AN+     +  + T TL+LLR
Sbjct: 122 DLIEAMRSYEANVSAFTTTKTIDTKTLELLR 152


>gi|328947992|ref|YP_004365329.1| flagellar basal-body rod protein FlgC [Treponema succinifaciens DSM
           2489]
 gi|328448316|gb|AEB14032.1| flagellar basal-body rod protein FlgC [Treponema succinifaciens DSM
           2489]
          Length = 153

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 22/149 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----------- 52
           L  S +IA +G++V+  R  +IS NIANA TT    G   YR++++  E           
Sbjct: 3   LFTSINIAATGMSVERLRTDVISNNIANATTTRTQEGG-AYRKQSVIVEPIASSNPQWRF 61

Query: 53  -----EVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                E+ +G G GVRV++I  D       +DP HP A       G V+YPNVN++ E  
Sbjct: 62  PFVDSELDNGPGKGVRVREIIKDSEQGRMVYDPSHPDAIQSGPNKGYVEYPNVNIVNEMV 121

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +M   NR Y AN   I+ S +M  + L++
Sbjct: 122 NMISANRAYEANSSVIQGSKEMFASALEI 150


>gi|255598721|ref|XP_002537067.1| Flagellar basal-body rod protein flgC, putative [Ricinus communis]
 gi|223517602|gb|EEF25316.1| Flagellar basal-body rod protein flgC, putative [Ricinus communis]
          Length = 121

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 4/122 (3%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIGVDQS 71
           ++ QS R+  ++ N+ANA +   +    PY+ K + F+ V   +     V V+++  D  
Sbjct: 1   MSAQSMRLNTVASNLANADSVVSS-DGKPYQSKQVVFKAVQDAANKSSTVEVERVIEDTK 59

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                +DP HP+ANA G +  PNVNV  E  +M   +R Y  N++T+  +  M+  TL++
Sbjct: 60  PGKMVYDPKHPMANADGYITMPNVNVTEEMVNMISASRAYQNNVETMNAAKTMLLKTLNI 119

Query: 132 LR 133
            +
Sbjct: 120 GQ 121


>gi|257095361|ref|YP_003169002.1| flagellar basal-body rod protein FlgC [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047885|gb|ACV37073.1| flagellar basal-body rod protein FlgC [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 134

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 4/121 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---G 60
           ++ +  +A S L  QS R+  ++ N+ANA +   +    PYR K + F     GS    G
Sbjct: 3   ILNAFQVAGSALTAQSLRLNAVASNLANADSVVGS-DGKPYRAKQVVFVATPMGSPAAEG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRVK++  D S     +DP +P A+  G V  PNVNV+ E  +M   +R Y  N++ +  
Sbjct: 62  VRVKQVVEDSSPGRRVYDPRNPAADDRGYVTMPNVNVVDEMTNMISASRSYQTNVEVMNT 121

Query: 121 S 121
           +
Sbjct: 122 A 122


>gi|148976392|ref|ZP_01813098.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
 gi|145964215|gb|EDK29471.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
          Length = 137

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           L    ++  S ++ +S R+   S N+ANA +   +   + Y+ +   F   ++ +     
Sbjct: 3   LFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSS-AKETYKARHAVFGAELNRARNSDH 61

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V  I         E++P HP+AN  G +   NVNV+ E A+M   +R Y  N+Q 
Sbjct: 62  TVPVKVLGIVESDKPLSAEYNPDHPLANNEGFIYKSNVNVMEEMANMISASRAYQTNVQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
              S  M+  TL + +
Sbjct: 122 ADSSKQMLLRTLQMGQ 137


>gi|74317654|ref|YP_315394.1| flagellar basal-body rod protein FlgC [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057149|gb|AAZ97589.1| flagellar basal-body rod protein FlgC [Thiobacillus denitrificans
           ATCC 25259]
          Length = 134

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 4/118 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
           L    ++A S +  QS R+  ++ N+ANA +   +    PY+ K + F       +G+ G
Sbjct: 3   LFNIFNVAGSAMNAQSQRLNTVASNLANADS-ATSANGQPYKAKQVVFAAAPVGDNGATG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           V V  +  D S     +DP +P+A+  G V  PNVNV+ E  +M   +R Y +N++ +
Sbjct: 62  VNVAAVIDDPSPMKTVYDPKNPLADDKGYVTMPNVNVVEEMVNMISASRSYQSNVEMM 119


>gi|57242334|ref|ZP_00370273.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           RM3195]
 gi|315638445|ref|ZP_07893622.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           JV21]
 gi|57017014|gb|EAL53796.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           RM3195]
 gi|315481436|gb|EFU72063.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           JV21]
          Length = 164

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL +   I+  GL+ Q  RM +IS NIANA+TT    G  PYRR+ + F         
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANAQTTRTAEGG-PYRRREVIFKANDFDALI 58

Query: 52  -EEVMHGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
            +++   +  ++ +    D S+                      F  ++DP HP ANA G
Sbjct: 59  NQQINKDNNFLKYENPLNDPSSPEEAKPAIMSVVVDKVVRDDKDFRMKYDPSHPDANAEG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V +PNVN ++E AD+ E  R Y AN+     +  +  + +D+L+
Sbjct: 119 YVAFPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDILK 163


>gi|285018211|ref|YP_003375922.1| flagellar basal body rod protein [Xanthomonas albilineans GPE PC73]
 gi|283473429|emb|CBA15934.1| probable flagellar basal body rod protein [Xanthomonas albilineans]
          Length = 135

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 6/137 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
           M  L     +A S L  QS RM  I+ N+ANA +   +  +  Y+     F+ V      
Sbjct: 1   MSNL-PIFDVAGSALQAQSVRMSTIASNLANADSVAGSAEA-AYKPIEPIFQAVRDPHDS 58

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV VK+I   +   ++ ++PGHP+A+A G +  P+++ + +  ++   +R Y A ++
Sbjct: 59  ALTGVNVKEISQSKDPPIKRYEPGHPLADADGYIYSPDIDPVSQMVNLISASRNYQAGVE 118

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  + ++  +TL + R
Sbjct: 119 VLNTAKELALSTLTIGR 135


>gi|182412250|ref|YP_001817316.1| flagellar basal-body rod protein FlgC [Opitutus terrae PB90-1]
 gi|177839464|gb|ACB73716.1| flagellar basal-body rod protein FlgC [Opitutus terrae PB90-1]
          Length = 139

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 9/138 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           LI+   I    L  Q  R+ ++++NIANA+TT  TP   PY+R+ +SFE  +    G   
Sbjct: 3   LISGIDITAGALNAQKTRLDMVAQNIANAQTTR-TPNGGPYQRQVVSFETELVRREGLSG 61

Query: 61  -----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                V+V  +  D+S   + F+P HP A   G+V  PNVN+  E  D+   +R Y ANL
Sbjct: 62  PALQSVKVANVTADRSPGQQVFNPQHPDAGPDGLVTMPNVNLSYEMVDLITASRAYEANL 121

Query: 116 QTIKQSHDMMTTTLDLLR 133
             ++ +  M   TL + +
Sbjct: 122 AVVRNARQMAVKTLQIGK 139


>gi|222824065|ref|YP_002575639.1| flagellar proximal rod protein FlgC [Campylobacter lari RM2100]
 gi|222539287|gb|ACM64388.1| flagellar proximal rod protein FlgC [Campylobacter lari RM2100]
          Length = 164

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 34/165 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M YL +   I+  GL+ Q  RM +IS NIANA TT    G  PYRR+ + F+        
Sbjct: 1   MAYL-SDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGG-PYRRREVIFKATDFNELL 58

Query: 56  -----HGSGGVRVKKIGVDQST----------------------FVEEFDPGHPVANASG 88
                  +  +  +    D ++                      F  ++DP HP AN  G
Sbjct: 59  NKQITKDNNFLEYENPLNDPASQKDAKPAIMSVVVDKVVRDDKDFRMKYDPSHPDANEQG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V +PN+N ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 119 YVAFPNINPVIEMADLIEATRAYQANVSAFTSTKTIAQSAIDLLR 163


>gi|329849687|ref|ZP_08264533.1| flagellar basal-body rod protein FlgC [Asticcacaulis biprosthecum
           C19]
 gi|328841598|gb|EGF91168.1| flagellar basal-body rod protein FlgC [Asticcacaulis biprosthecum
           C19]
          Length = 138

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/117 (47%), Positives = 76/117 (64%), Gaps = 1/117 (0%)

Query: 18  QSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSGGVRVKKIGVDQSTFVEE 76
           Q ARM++ +ENIANA + G TPG+DPYRR+   F+   + G+ GVR+ ++  D   F  E
Sbjct: 21  QQARMRVTAENIANASSLGTTPGADPYRRQIPVFQSTNIDGATGVRLARVVPDMKEFATE 80

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +DP HP A+A G VK PNV+ L E+ DMRE  R Y ANL  I+ + DM    L++L+
Sbjct: 81  YDPSHPAADAQGYVKRPNVDTLTESMDMREAQRAYEANLNVIETARDMNQKILNILQ 137


>gi|94987301|ref|YP_595234.1| flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731550|emb|CAJ54913.1| Flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 146

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 16/147 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---------F 51
           MD++  +  I  S L+     + + + N+ANA+TT  TP   PYRRKT+          F
Sbjct: 1   MDFM-TAFDIGASALSADRTTINVTAMNLANAKTTR-TPEGGPYRRKTVIRAATDVDEPF 58

Query: 52  EEVMHGS-----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            + M  +      GVR+  +  D     + ++PGHP A+ +G+V YP++NV+ E A++  
Sbjct: 59  SKQMQSALDRELKGVRILNVLPDNRPPKQIYEPGHPDADENGMVSYPDINVVEEMANLMT 118

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN  TI    +M    LD+ R
Sbjct: 119 ASRNYEANSTTIDTVKNMYMRALDIGR 145


>gi|83716764|ref|YP_438387.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|257141420|ref|ZP_05589682.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|83650589|gb|ABC34653.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
          Length = 138

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
               A IA S ++ Q+ R+  I+ N+ANA        S  YR +   F  +         
Sbjct: 3   FKDIAQIAGSAMSAQTVRLNTIASNLANADAASGAEDST-YRARKPVFASIFQLDAQGEP 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  +        +   PGHP+A+A G V YPNVN + E  DM   +R Y  N++
Sbjct: 62  RGAAVQVLDVVKSTEPLRKVHQPGHPLADAEGNVLYPNVNPVEEMTDMLSASRAYSTNVE 121

Query: 117 TIKQSHDMMTTTLDLLR 133
            + + + M    L L +
Sbjct: 122 VLGRVNSMQLELLKLGQ 138


>gi|258514001|ref|YP_003190223.1| flagellar basal-body rod protein FlgC [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777706|gb|ACV61600.1| flagellar basal-body rod protein FlgC [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 140

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 9/125 (7%)

Query: 17  VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--------SGGVRVKKIGV 68
            +   + IIS NIAN  TT    G  PY+R+   F + +          +GGV V ++  
Sbjct: 16  AERLWLDIISNNIANLNTTRTAKGG-PYKRQMPVFSQRLQSVVDSAKTRAGGVEVNRVVQ 74

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D +     +DP HP A+  G V YPN+N++ E  +M    R Y AN   ++ S  M    
Sbjct: 75  DNAPPRMVYDPSHPDADQEGNVAYPNINIVNEMVNMMAARRAYEANATALEASKSMAMKA 134

Query: 129 LDLLR 133
           L++ R
Sbjct: 135 LEIGR 139


>gi|167576660|ref|ZP_02369534.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           TXDOH]
          Length = 138

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
               A IA S ++ Q+ R+  I+ N+ANA        S  YR +   F  +         
Sbjct: 3   FKDIAQIAGSAMSAQTVRLNTIASNLANADAASGAEDST-YRARKPVFASIFQLDAQGEP 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  +        +   PGHP+A+  G V YPNVN + E  DM   +R Y  N++
Sbjct: 62  RGAAVQVLDVVKSTEPLRKVHQPGHPLADDEGNVLYPNVNPVEEMTDMLSASRAYSTNVE 121

Query: 117 TIKQSHDMMTTTLDLLR 133
            + + + M    L L +
Sbjct: 122 VLGRVNSMQLELLKLGQ 138


>gi|89902475|ref|YP_524946.1| flagellar basal-body rod protein FlgC [Rhodoferax ferrireducens
           T118]
 gi|89347212|gb|ABD71415.1| flagellar basal-body rod protein FlgC [Rhodoferax ferrireducens
           T118]
          Length = 134

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 4/133 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  +++ S ++ QS R+ +++ N+ANA      P    Y+ + + FE V  GS     
Sbjct: 3   MFSIFNVSGSAISAQSQRLNVVASNLANADAVAG-PDGQGYKGRQVVFETVPMGSDASSG 61

Query: 64  KKIGVD---QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
            ++           +  +P HP A+A G V   NVN + E  +M   +R Y  N++ +  
Sbjct: 62  VRVSSVSESNEPLRKVHNPSHPSADADGYVTQSNVNPIEEMVNMISASRSYQNNVEVMNT 121

Query: 121 SHDMMTTTLDLLR 133
           +  ++  TL + +
Sbjct: 122 AKTLLLKTLQMGQ 134


>gi|227873538|ref|ZP_03991783.1| flagellar basal body rod protein [Oribacterium sinus F0268]
 gi|227840628|gb|EEJ51013.1| flagellar basal body rod protein [Oribacterium sinus F0268]
          Length = 136

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 19/137 (13%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS--------FEEVMHGS-------- 58
           ++ Q  RM I +ENIAN  TT  T     Y+RK +         F++ +  +        
Sbjct: 1   MSAQRVRMDIAAENIANVDTTR-TEAGSAYKRKDVVLESFGERSFQQALRNAQNGKGFRG 59

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GVRV+ +  D       ++P HP A+A G V YPNV++L ET D     R Y AN+ 
Sbjct: 60  QHAGVRVQGVITDDREMKRVYNPNHPDADAQGYVNYPNVDILKETVDSMSATRSYEANVT 119

Query: 117 TIKQSHDMMTTTLDLLR 133
            +     M    LD+ +
Sbjct: 120 ALNAMKTMAQRALDIGK 136


>gi|254516987|ref|ZP_05129045.1| flagellar basal-body rod protein FlgC [gamma proteobacterium
           NOR5-3]
 gi|219674492|gb|EED30860.1| flagellar basal-body rod protein FlgC [gamma proteobacterium
           NOR5-3]
          Length = 140

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 10/139 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
           L  +  +A + L  QS R+  IS N+ANA     +   + YR +   FE ++        
Sbjct: 3   LFDAIGVAATSLDAQSQRLNTISSNLANANAVSSS-AEETYRAQYPVFETMLNDLTTGNG 61

Query: 56  -HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
             G  GVRV  I   +   V E+ P HP+A+  G +  P +N + E A+M E +R Y  +
Sbjct: 62  ADGVAGVRVTGIAQSELPAVREYVPTHPLADDEGFIYRPAINSVEEMANMMEASRSYQDS 121

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ +  +  ++  TL L R
Sbjct: 122 IEAMNTAKQLILRTLTLGR 140


>gi|224417697|ref|ZP_03655703.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
           98-5491]
 gi|253827046|ref|ZP_04869931.1| flagellar basal body rod protein [Helicobacter canadensis MIT
           98-5491]
 gi|313141240|ref|ZP_07803433.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
           98-5491]
 gi|253510452|gb|EES89111.1| flagellar basal body rod protein [Helicobacter canadensis MIT
           98-5491]
 gi|313130271|gb|EFR47888.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
           98-5491]
          Length = 166

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 36/165 (21%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS-----FEEVMHGS 58
            ++S  I+  GL+ Q  R+ +IS NIANA TT    G  PYRR+ +      F++V++  
Sbjct: 2   FLSSFDISGYGLSAQRQRVNLISSNIANANTTRTDEGG-PYRRRELILKAFDFDKVLNQK 60

Query: 59  ------------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V KI  D S    +++P HP AN+ G
Sbjct: 61  YQKSNNLLKYEDPLDEMDSFNEQREPKPALMSVYVDKIVRDDSQPKMKYEPNHPDANSEG 120

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N +VE AD+ E  + Y AN+   + + +M    + + +
Sbjct: 121 YVAYPNINAVVEMADLIEATKAYQANVAAFQSAKNMANNAISMFQ 165


>gi|258511369|ref|YP_003184803.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478095|gb|ACV58414.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 144

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 16/142 (11%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------- 57
            S +I+ SGLA     + +I+ NIAN  TT  TP   PYR + ++F  V +         
Sbjct: 5   TSMNISASGLAANQLWLNVIANNIANVNTTR-TPQGGPYRAEIVNFAPVENDVSFQTALG 63

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  GGV V  I  D S F   +DP +P A  +G V+  NVN+  +  D+ +  R Y
Sbjct: 64  QAVQGIGGGVEVTSITQDTSPFQLIYDPSNPDA-VNGYVETSNVNLTTQMVDLIQATRAY 122

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN      +  M  T L + +
Sbjct: 123 QANATAFDAAKQMAVTALGIGK 144


>gi|77464908|ref|YP_354412.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
           2.4.1]
 gi|221640829|ref|YP_002527091.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
           KD131]
 gi|77389326|gb|ABA80511.1| putative flagellar basal-body rod protein FlgC [Rhodobacter
           sphaeroides 2.4.1]
 gi|221161610|gb|ACM02590.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
           KD131]
          Length = 128

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 8/133 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+ S  ++ SG+  Q+ R++ +SENIANA T G       Y RKT+SF+E    SG 
Sbjct: 3   MTDLLQSLGLSASGMRSQALRLRHVSENIANADTPG-------YHRKTVSFQEDPD-SGL 54

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V    + +D+S   + + PGHP+A   G     NV+++VE AD RE  R Y ANL+   Q
Sbjct: 55  VSTGPVRLDRSELQKIYAPGHPLAGEDGYYDGSNVDLVVEIADAREAQRSYEANLRMFDQ 114

Query: 121 SHDMMTTTLDLLR 133
           +  M  + LDLLR
Sbjct: 115 ARQMTQSLLDLLR 127


>gi|296135675|ref|YP_003642917.1| flagellar basal-body rod protein FlgC [Thiomonas intermedia K12]
 gi|294339845|emb|CAZ88208.1| Flagellar basal-body rod protein flgC (Putative proximal rod
           protein) [Thiomonas sp. 3As]
 gi|295795797|gb|ADG30587.1| flagellar basal-body rod protein FlgC [Thiomonas intermedia K12]
          Length = 138

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 8/122 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-------VMH 56
           L ++  +ANSGL  +S R+ +++ N+ANA +   + G  PYR + + F         V  
Sbjct: 3   LFSALDVANSGLTAESYRLNVVASNLANANSAVSSNG-QPYRAREVVFAAQPLSGPGVPA 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G  GV+V  +          ++PG+P+AN  G V YPNVN + E  +M   +R Y A++ 
Sbjct: 62  GVNGVQVAGVVEKPGPLKLVYEPGNPLANKDGYVSYPNVNPVDEMVNMISASRAYQADVN 121

Query: 117 TI 118
            +
Sbjct: 122 VM 123


>gi|226225740|ref|YP_002759846.1| flagellar basal-body rod protein FlgC [Gemmatimonas aurantiaca
           T-27]
 gi|226088931|dbj|BAH37376.1| flagellar basal-body rod protein FlgC [Gemmatimonas aurantiaca
           T-27]
          Length = 183

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 72/184 (39%), Gaps = 54/184 (29%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           M  +  S  IA SG++ Q  RM+ I++NIANA  T  T    PY+R+ +  E        
Sbjct: 1   MRPMFKSMGIAASGISAQRQRMETIAQNIANADVTRGT-DGTPYKRREVVLESATAQNAL 59

Query: 54  ----------------------------------------------VMHGSGGVRVKKIG 67
                                                         VM G  GVRV  + 
Sbjct: 60  FNPGNVTAQTLGNQNVAGAPAFEVPITDAAQTFQVPVLPVTGGADGVMGGEFGVRVAGVA 119

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            DQ      ++PGHP A+ +G V+YP+++   E   + +  R+Y AN    + +  M+  
Sbjct: 120 EDQGEGRLVYEPGHPDADGNGYVRYPDIDTTQELVKLMDAKRIYEANAAVFQTAKSMLRA 179

Query: 128 TLDL 131
            LD+
Sbjct: 180 ALDI 183


>gi|126463750|ref|YP_001044864.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17029]
 gi|332559806|ref|ZP_08414128.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides
           WS8N]
 gi|126105414|gb|ABN78092.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|332277518|gb|EGJ22833.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides
           WS8N]
          Length = 126

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 8/133 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+ S  ++ SG+  Q+ R++ +SENIANA T G       Y RKT+SF+E    SG 
Sbjct: 1   MTDLLQSLGLSASGMRSQALRLRHVSENIANADTPG-------YHRKTVSFQEDPD-SGL 52

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V    + +D+S   + + PGHP+A   G     NV+++VE AD RE  R Y ANL+   Q
Sbjct: 53  VSTGPVRLDRSELQKIYAPGHPLAGEDGYYDGSNVDLVVEVADAREAQRSYEANLRMFDQ 112

Query: 121 SHDMMTTTLDLLR 133
           +  M  + LDLLR
Sbjct: 113 ARQMTQSLLDLLR 125


>gi|94263245|ref|ZP_01287062.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
 gi|93456463|gb|EAT06583.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
          Length = 144

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 15/146 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           MD ++ + +I+ S L  + +R+ I S N+ANA TT    G  PYR K++ FE        
Sbjct: 1   MD-ILTAMNISGSALKAERSRLNIASMNMANANTTRTVEGG-PYRAKSVVFEARPLERDF 58

Query: 54  --VMHGSGG----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
              + G+      V V ++  D++ F E ++P HP A+ +GIV+YPNVN   +  DM   
Sbjct: 59  NTTLQGAASRLRKVEVVEVVEDRAPFREVYEPHHPDADENGIVRYPNVNTAEQMVDMMNA 118

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+  +    +M    L++ R
Sbjct: 119 RRSYEANVAALDAVKEMALRALEISR 144


>gi|218288292|ref|ZP_03492591.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241651|gb|EED08824.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 144

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 16/142 (11%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------- 57
            S  I+ SGLA     + +I+ NIAN  TT  TP   PYR + ++F  V +         
Sbjct: 5   TSMDISASGLAANQLWLNVIANNIANVNTTR-TPQGGPYRAEIVNFAPVENDVSFQTALG 63

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  GGV V  I  D S F   +DP +P A  +G V+  NVN+  +  D+ +  R Y
Sbjct: 64  QAVQGIGGGVEVTSITQDTSPFQLIYDPSNPDA-VNGYVESSNVNLTTQMVDLIQATRAY 122

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN      +  M  T L + +
Sbjct: 123 QANATAFDAAKQMAVTALGIGK 144


>gi|294679035|ref|YP_003579650.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB
           1003]
 gi|294477855|gb|ADE87243.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB
           1003]
          Length = 131

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 50/137 (36%), Positives = 76/137 (55%), Gaps = 11/137 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV----MH 56
           M    ++  ++ SGL  QS R++ +SENIANA T G       Y RK + FEE+      
Sbjct: 1   MGDFTSTLSVSASGLKAQSMRLRHVSENIANADTPG-------YHRKVVRFEELAAQKDG 53

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ GV +  + +DQ      +DPG P+A+ +G     NV+++VE AD R+  R Y ANL+
Sbjct: 54  GATGVELGPVELDQKELARIYDPGSPLADENGYYDGSNVDLVVEIADARQAQRSYEANLR 113

Query: 117 TIKQSHDMMTTTLDLLR 133
              Q+  M +  ++LLR
Sbjct: 114 MFDQTRQMSSALMELLR 130


>gi|251772446|gb|EES53013.1| flagellar basal-body rod protein FlgC [Leptospirillum
           ferrodiazotrophum]
          Length = 145

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 15/142 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
              +  I+ SGL  +  R+ +++ N+ANA  T   P    Y R+ + F  V  G      
Sbjct: 3   FSDAMRISASGLEAERVRLNVLAGNLANADATRGNPNGT-YERRDVIFAAVAPGRSFSDI 61

Query: 60  ----------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                      VRV  +  D    V  +DP +P A+  G V +PNV+ L E  ++ + +R
Sbjct: 62  LNSPQESPVKEVRVLGMVRDPRPLVRVYDPNNPDADRDGYVMHPNVSKLEEMTNLIDASR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            Y ANL  +  +  M +  L +
Sbjct: 122 AYEANLTAMDTTKRMASKDLTI 143


>gi|260767921|ref|ZP_05876855.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|260615951|gb|EEX41136.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|315179624|gb|ADT86538.1| flagellar basal-body rod protein FlgC [Vibrio furnissii NCTC 11218]
          Length = 144

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 12/142 (8%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------ 56
                  IA S +  Q+ R+  ++ N+ANA      P  D YR     F  V +      
Sbjct: 2   PFTDIYSIAGSAMTAQTVRLNTVASNLANADAVSANPD-DAYRALKPVFATVYNKSQLAT 60

Query: 57  -----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                 S  VR+  +        + F+P +P+A+  G V YP+++V+ E ADM    R +
Sbjct: 61  GDNVYPSAEVRIVDVVQSAGQAEKRFEPHNPLADGDGYVYYPDIDVVAEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N++ +     M    L L +
Sbjct: 121 ETNVEVLSNVKSMQQGLLKLGQ 142


>gi|260574405|ref|ZP_05842409.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2]
 gi|259023301|gb|EEW26593.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2]
          Length = 126

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 55/133 (41%), Positives = 80/133 (60%), Gaps = 8/133 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+ S  +A SG+  Q+ R++ +SENIANA T G       Y RKT+SF+E M G G 
Sbjct: 1   MADLLQSLTMAASGMEAQAMRLRHVSENIANADTPG-------YHRKTMSFQEAMDG-GT 52

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V    + +D+S  V+ +DPGHP+A+ +G     NV++++E AD RE  R Y ANL+   Q
Sbjct: 53  VEAGPVRLDRSELVKIYDPGHPLADETGHYDGSNVDLVIEIADAREAQRSYEANLKMFDQ 112

Query: 121 SHDMMTTTLDLLR 133
           +  M  +  +LLR
Sbjct: 113 ARQMTQSLFELLR 125


>gi|167626153|ref|YP_001676447.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
 gi|167356175|gb|ABZ78788.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
          Length = 139

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 8/131 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------GSGGV 61
            IA +G+  Q+ R+  ++ N+ANA    ++P  + +R     F  +             V
Sbjct: 8   QIAGAGMNAQTIRLNTVASNLANAGAAAESPD-EAFRALKPVFSTIYKQTQEGQVAGAHV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V  I    +     ++P HP A+  G V Y NVN + E ADM   +R +  N++ + ++
Sbjct: 67  EVSAIVQSDAPLDLRYEPDHPYADEQGYVAYSNVNTVEEMADMMAASRSFETNVEIMNRA 126

Query: 122 HDMMTTTLDLL 132
             M    L L 
Sbjct: 127 RSMQQGLLQLG 137


>gi|254476330|ref|ZP_05089716.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11]
 gi|214030573|gb|EEB71408.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11]
          Length = 130

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  I+ S L  QS R++ +SENI+NA T G       YRRKT+ FE V   S  
Sbjct: 1   MSEFAKSLSISASALQAQSTRLRHVSENISNADTPG-------YRRKTVPFEAVRDLSAD 53

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    V  + +D+S   + +DP HP+A+ SG  K  NV++++E AD RE  R Y ANL+ 
Sbjct: 54  VEKVSVGPVRLDRSDLEQVYDPSHPLADDSGHYKGSNVDLMIEIADAREAQRSYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
            +Q   M ++ +DLLR
Sbjct: 114 FEQGRQMSSSLMDLLR 129


>gi|322382305|ref|ZP_08056212.1| flagellar basal body rod protein FlgC-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321153658|gb|EFX46033.1| flagellar basal body rod protein FlgC-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 129

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 17/129 (13%)

Query: 22  MQIISENIANARTTGDTPGSD---PYRRKTIS--------FEEVMHGS------GGVRVK 64
           M +IS NIANA +T          PY+RK +         F + +  +       GVRV 
Sbjct: 1   MDVISSNIANADSTRGKFVDGKWVPYQRKMVVVEPKNQTNFAQNLQNAMKNGTGQGVRVS 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  DQ+ F   ++P HP ++A G V  PNV++  E  DM    R Y AN+  +  +  M
Sbjct: 61  NIVGDQTPFKRVYNPVHPDSDADGYVYMPNVDIQKEMVDMISATRSYEANVTALNATKGM 120

Query: 125 MTTTLDLLR 133
           +T  L++ R
Sbjct: 121 ITKALEIGR 129


>gi|297569162|ref|YP_003690506.1| flagellar basal-body rod protein FlgC [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925077|gb|ADH85887.1| flagellar basal-body rod protein FlgC [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 144

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 15/146 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           MD ++ +  I+ S L  + +R+ + S N+ANA TT    G  PYR K++ FE        
Sbjct: 1   MD-ILTAMKISGSALKAERSRLNVASMNLANANTTRTMEGG-PYRAKSVVFEAKPLDRDF 58

Query: 54  --VMHGSGG----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
              + G+      V V ++  DQ+ F E +DP HP A+ +GIV+YPNVNV  +  DM   
Sbjct: 59  GAALQGAASRLRKVEVVEVVEDQAPFREVYDPAHPDADENGIVRYPNVNVAEQMVDMMNA 118

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+  ++   +M    +D+ R
Sbjct: 119 RRSYEANVAALEAVKEMAARAMDISR 144


>gi|119477955|ref|ZP_01618055.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2143]
 gi|119448868|gb|EAW30110.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2143]
          Length = 147

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 17/146 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           L     IA  G++ QS R+   + N+ANA+        + YR +   FE           
Sbjct: 3   LANVFDIAGMGMSAQSIRLNTTASNLANAQAASSNID-EVYRARHPVFETMRMDMMANNN 61

Query: 54  ------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                     S G+RV  I    +  V  ++P H  A+  G V YPNVNV+ E ADM   
Sbjct: 62  GSMPTLADDASMGMRVTGIVESDAPLVRRYEPNHLKADEEGYVYYPNVNVVEEMADMISA 121

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N++ +  +  MM   L L +
Sbjct: 122 SRSFQVNVELMNSAKQMMQGLLRLGQ 147


>gi|163850061|ref|YP_001638104.1| flagellar basal body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218528664|ref|YP_002419480.1| flagellar basal body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240137195|ref|YP_002961664.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254559207|ref|YP_003066302.1| cell-proximal portion of basal-body rod biosynthesis protein
           [Methylobacterium extorquens DM4]
 gi|163661666|gb|ABY29033.1| flagellar basal-body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218520967|gb|ACK81552.1| flagellar basal-body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240007161|gb|ACS38387.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254266485|emb|CAX22249.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Methylobacterium extorquens DM4]
          Length = 138

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 68/136 (50%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L++++ +A++GL  QS RM+++SEN+ANA++TG TPG+DPY RKT++F   +  + G
Sbjct: 2   IDPLLSASRLASAGLEAQSLRMRVVSENLANAQSTGATPGADPYARKTVTFRAELDRAAG 61

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   R+++IG D + F  E DP +  A+A+G VK PNVN+LVE ADMRE NR Y ANLQ 
Sbjct: 62  VASVRLREIGTDNAPFRTEHDPANAAADANGNVKLPNVNMLVEMADMREANRSYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  M+ + +DLL+
Sbjct: 122 IKQARAMVASVIDLLK 137


>gi|83944175|ref|ZP_00956631.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
 gi|83955124|ref|ZP_00963780.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
 gi|83840453|gb|EAP79626.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
 gi|83845042|gb|EAP82923.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
          Length = 122

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 3/122 (2%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---VRVKKIGVDQS 71
           +  Q  R++I+SEN+ANA +T  T G DPY+RKTISFE     S G   V+   +  D +
Sbjct: 1   MRAQGDRLRIVSENLANASSTAQTAGGDPYQRKTISFESATDPSTGAAIVQSAGVLRDDA 60

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            F   ++P HP A+ +G +K PNVN L+E ++MRE  R Y ANL  + ++ DM    ++L
Sbjct: 61  DFTLRYEPSHPAADQNGYIKMPNVNPLIEMSNMREAARSYEANLSMLDKARDMRRQLVEL 120

Query: 132 LR 133
           L+
Sbjct: 121 LK 122


>gi|212637783|ref|YP_002314308.1| flagellar basal-body rod protein FlgC [Shewanella piezotolerans
           WP3]
 gi|212559267|gb|ACJ31721.1| Flagellar basal-body rod protein FlgC [Shewanella piezotolerans
           WP3]
          Length = 139

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 8/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 IA +G+  Q+ R+  ++ N+ANA    ++P    +R     F  +         
Sbjct: 3   FSEIYQIAGAGMNAQTIRLNTVASNLANAGAAAESPD-QAFRALKPVFSTIYKQTQEGQV 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V V  I    +     ++P HP A+  G V Y NVN + E ADM   +R +  +++
Sbjct: 62  AGAHVEVSAIVETDAPLDLRYEPDHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSVE 121

Query: 117 TIKQSHDMMTTTLDLL 132
            + ++  M    L L 
Sbjct: 122 VMNRARSMQQGLLQLG 137


>gi|260431752|ref|ZP_05785723.1| flagellar basal-body rod protein FlgC [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415580|gb|EEX08839.1| flagellar basal-body rod protein FlgC [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 128

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 8/134 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSG 59
           M     S  +  S L  Q+AR++ +SENI+NA T G       YRRKT+ FE V   G+ 
Sbjct: 1   MGDFSKSLEVTASALRAQAARLRHVSENISNADTPG-------YRRKTVPFEAVHKDGAD 53

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            V+  ++ +DQS     +DPGHP+A+ SG  +  NV++++E AD RE  R Y ANL+   
Sbjct: 54  LVQAGRVRLDQSKLSRIYDPGHPLADESGHYQGSNVDLMIEIADAREAQRSYEANLKMFD 113

Query: 120 QSHDMMTTTLDLLR 133
           Q+  M ++ ++LLR
Sbjct: 114 QARQMSSSLMELLR 127


>gi|323341388|ref|ZP_08081632.1| flagellar basal-body rod protein FlgC [Lactobacillus ruminis ATCC
           25644]
 gi|323091265|gb|EFZ33893.1| flagellar basal-body rod protein FlgC [Lactobacillus ruminis ATCC
           25644]
          Length = 139

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 10/139 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           +     I  SGL+++  ++ + S NIAN  TT    G  PY++KT+ F E +        
Sbjct: 3   IFNGLQINASGLSLERMKLDVASTNIANVNTTRTAEGG-PYKKKTVEFSENLRQAQGTNK 61

Query: 58  --SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             S GV+V  I  D +T    +DP +P A+A+G V+ PNVN+  E  DM +  R Y AN+
Sbjct: 62  ITSAGVKVTNIAEDNTT-KLTYDPTNPDADANGYVEMPNVNMADEMVDMIQAMRTYEANV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
            + + + +++   L++ +D
Sbjct: 121 SSTEANKNILKKALEISKD 139


>gi|170694390|ref|ZP_02885544.1| flagellar basal-body rod protein FlgC [Burkholderia graminis C4D1M]
 gi|170140813|gb|EDT08987.1| flagellar basal-body rod protein FlgC [Burkholderia graminis C4D1M]
          Length = 127

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 14/129 (10%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG------- 67
           ++ QS R+ + + N+ANA +T   P   PY+ K + F   +   GG R            
Sbjct: 1   MSAQSQRLNVTASNLANADST-TGPDGQPYKAKQVVF--GVAPIGGARTGSGQQVGGVQV 57

Query: 68  ----VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                D +     +DPG+P ANA G V  PNV+ + E  +M   +R Y AN++T+  +  
Sbjct: 58  TGVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKT 117

Query: 124 MMTTTLDLL 132
           +M  TL + 
Sbjct: 118 LMLKTLTIG 126


>gi|238916744|ref|YP_002930261.1| flagellar basal-body rod protein FlgC [Eubacterium eligens ATCC
           27750]
 gi|238872104|gb|ACR71814.1| flagellar basal-body rod protein FlgC [Eubacterium eligens ATCC
           27750]
          Length = 164

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/162 (29%), Positives = 67/162 (41%), Gaps = 34/162 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           +  + +++ SG+  Q  R  +ISENIANA TT  +    PY RK + F E          
Sbjct: 1   MFTAFNVSASGMTAQQLRTDVISENIANADTTRTS-DGTPYVRKAVVFTEKTMTGTALGK 59

Query: 54  VMHGSGGVRV----------------------KKIGVDQS-TFVEEFDPGHPVANASGIV 90
             +GS G                           +  D S      +DP HP A+ +G V
Sbjct: 60  SAYGSYGTGAYSTFSDALRLANGGVVGNGVKVTSVYEDTSTDMEMVYDPSHPDADENGYV 119

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            YPNVN + E  D+ + +R Y AN+     S  M T  L + 
Sbjct: 120 TYPNVNTVQEMTDLIDASRSYEANISAFNASKSMATKGLSIG 161


>gi|157959904|ref|YP_001499938.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
           700345]
 gi|157844904|gb|ABV85403.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
           700345]
          Length = 139

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 8/131 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------GSGGV 61
            IA +G+  Q+ R+  ++ N+ANA    ++P    +R     F  +             V
Sbjct: 8   QIAGAGMNAQTIRLNTVASNLANAGAAAESPD-QAFRALKPVFSTIYKQTQEGELAGAHV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V  I    +     ++P HP A+  G V Y NVN + E ADM   +R +  +++ + ++
Sbjct: 67  EVSAIVQSDAPLDLRYEPNHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSVEVMNRA 126

Query: 122 HDMMTTTLDLL 132
             M    L L 
Sbjct: 127 RSMQQGLLQLG 137


>gi|154175290|ref|YP_001408541.1| flagellar basal body rod protein FlgC [Campylobacter curvus 525.92]
 gi|112803036|gb|EAU00380.1| flagellar basal-body rod protein FlgC [Campylobacter curvus 525.92]
          Length = 167

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 34/164 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M YL     I+  GL+ Q  RM +IS NIANA+TT    G  PYRR+ + F         
Sbjct: 1   MSYL-NDFDISGYGLSAQRFRMNVISSNIANAQTTRTAEGG-PYRRQEVIFKAFDFDKIL 58

Query: 52  -EEVMHGSGGVRVKKIGVDQSTFV----------------------EEFDPGHPVANASG 88
            EE+ +  G +  +    D S+                         ++DP HP ANA+G
Sbjct: 59  NEEMKNSGGLLEYENPLDDPSSPKNAHPSLMSVVVDKVVRDDKDFMLKYDPSHPDANANG 118

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            V +PN+N ++E AD+ E  R Y AN+   + +  +  + + LL
Sbjct: 119 YVAFPNINPVIEMADLVEATRAYQANVAAFQSAKMIAQSAITLL 162


>gi|229058378|ref|ZP_04196762.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH603]
 gi|228719887|gb|EEL71477.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH603]
          Length = 137

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TTG  PG++PY R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTG-APGAEPYHRRSVVLESNNNFASMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV+VK I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKVKSIETDRNE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|91794997|ref|YP_564648.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
           OS217]
 gi|91716999|gb|ABE56925.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
           OS217]
          Length = 139

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 8/133 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------GSGGV 61
            IA +G+  Q+ R+  ++ NIANA T  +TP  + YR     F  V             V
Sbjct: 8   QIAGAGMNAQTIRLNTVASNIANAGTAAETP-EEAYRALKPVFATVYEQFQQNATSGASV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V  I    +     ++P HP A+  G V Y NVN + E ADM   +R +  +++ + ++
Sbjct: 67  EVMDIVQTSAPLDLRYEPNHPYADEQGYVAYSNVNTVDEMADMMAASRSFETSVEIMNRA 126

Query: 122 HDMMTTTLDLLRD 134
             M    L L  +
Sbjct: 127 RSMQQGLLQLGGN 139


>gi|254511648|ref|ZP_05123715.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
           KLH11]
 gi|221535359|gb|EEE38347.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
           KLH11]
          Length = 128

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 8/134 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S   + S L  Q+AR++ +SENI+NA T G       YRRKT+ FE V  G   
Sbjct: 1   MSDFSHSLTASASALRAQAARLRHVSENISNADTPG-------YRRKTVPFETVKRGGAE 53

Query: 61  -VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            V+V  + +D+    + +DPGHP+A+ +G  +  NV++++E AD RE  R Y ANL+   
Sbjct: 54  LVQVGHVKLDRRDPGQIYDPGHPMADEAGYYRGSNVDLMIEIADAREAQRSYEANLKMFD 113

Query: 120 QSHDMMTTTLDLLR 133
           Q+  M ++ +DLLR
Sbjct: 114 QTRQMSSSLMDLLR 127


>gi|34497157|ref|NP_901372.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
 gi|34103014|gb|AAQ59377.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
          Length = 134

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 2/130 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVR 62
               + IA S +  Q+ R+  ++ NIANA T      S  YR +   F   M G G GV+
Sbjct: 3   FRDISRIAGSAMTAQTVRLNTVASNIANADTASGAEQS-AYRGRKPVFSSQMQGEGMGVQ 61

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V  +  +Q    +  +PG+P+A+A G V Y NVN + E  DM    R +  N++ + +  
Sbjct: 62  VLDVVQNQEPVRKAHEPGNPLADADGNVFYSNVNAVEEMTDMLSATRAFQTNVEVLAKVK 121

Query: 123 DMMTTTLDLL 132
            M    L L 
Sbjct: 122 TMQQDLLKLG 131


>gi|157373209|ref|YP_001471809.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
 gi|157315583|gb|ABV34681.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
          Length = 139

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 8/131 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-------V 61
            IA +G+  QS R+  ++ N+ANA    +T  S  YR     F  + + +         V
Sbjct: 8   QIAGAGMHAQSIRLNTVASNLANAGAAAETQDS-AYRALKPVFSTIYNQTQAGEVSGAQV 66

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V  I    +     ++P HP A+  G V Y NVN + E ADM   +R +  +++ + Q+
Sbjct: 67  EVAAIVETDAPLDMRYEPDHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSVEVMNQA 126

Query: 122 HDMMTTTLDLL 132
             M    L L 
Sbjct: 127 RSMQQGLLQLG 137


>gi|23008564|ref|ZP_00049957.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 118

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/117 (52%), Positives = 87/117 (74%), Gaps = 3/117 (2%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---VRVKKIGVDQSTFVEE 76
            RM+++SEN+ANA++TG TPG+DPY RKT++F+  +  + G   VR+++IG D++ F  E
Sbjct: 1   MRMRVVSENLANAQSTGATPGADPYSRKTVTFQAALDRAAGIASVRLREIGTDKTPFRTE 60

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            DP +P A+ +G VK PNVN+LVE ADMRE NR Y ANLQ IKQ+  M+ + +DLL+
Sbjct: 61  HDPANPAADENGNVKLPNVNMLVEMADMREANRSYEANLQVIKQARAMVASVIDLLK 117


>gi|188991643|ref|YP_001903653.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733403|emb|CAP51604.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 135

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 6/137 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA +   +  +  Y+     F+   +    
Sbjct: 1   MSNL-PIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEAT-YKPIEPIFQAQQNRQDP 58

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++
Sbjct: 59  SLTSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVE 118

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  + ++   TL + R
Sbjct: 119 MLNTAKELALATLTMGR 135


>gi|163939550|ref|YP_001644434.1| flagellar basal body rod protein FlgC [Bacillus weihenstephanensis
           KBAB4]
 gi|229132557|ref|ZP_04261406.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST196]
 gi|163861747|gb|ABY42806.1| flagellar basal-body rod protein FlgC [Bacillus weihenstephanensis
           KBAB4]
 gi|228650903|gb|EEL06889.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST196]
          Length = 137

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TTG  PG++PY R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTG-APGAEPYHRRSVVLESNNSFASMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIETDRNE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|78047588|ref|YP_363763.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|84624086|ref|YP_451458.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|166712064|ref|ZP_02243271.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzicola BLS256]
 gi|188576754|ref|YP_001913683.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188576945|ref|YP_001913874.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|325927873|ref|ZP_08189097.1| flagellar basal-body rod protein FlgC [Xanthomonas perforans
           91-118]
 gi|78036018|emb|CAJ23709.1| flagellar basal body rod protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|84368026|dbj|BAE69184.1| flagellar biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188521206|gb|ACD59151.1| flagellar basal-body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521397|gb|ACD59342.1| flagellar basal-body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|325541713|gb|EGD13231.1| flagellar basal-body rod protein FlgC [Xanthomonas perforans
           91-118]
          Length = 135

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 6/137 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA +   +  +  Y+     F+        
Sbjct: 1   MSNL-PIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEAT-YKPIEPIFQAQQSRQDP 58

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++
Sbjct: 59  SLTSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVE 118

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  + ++   TL + R
Sbjct: 119 MLNTAKELALATLTMGR 135


>gi|149203129|ref|ZP_01880100.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
 gi|149143675|gb|EDM31711.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
          Length = 130

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 54/136 (39%), Positives = 76/136 (55%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M     +  ++ SGL  Q+ R+Q +SENIANA T G       YRRKT+SFE    G   
Sbjct: 1   MSDFSNALSVSASGLKAQAQRLQHVSENIANADTPG-------YRRKTVSFEATHAGTGT 53

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +G V V ++ +DQS     +DP HP+A+ +G  +   V++++E AD RE  R Y ANL+ 
Sbjct: 54  AGAVTVSRVHLDQSAPQRIYDPSHPLADETGHYQGSTVDLMIEIADAREAQRSYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
             Q   M    +DLLR
Sbjct: 114 FDQVRQMSAGLMDLLR 129


>gi|320107020|ref|YP_004182610.1| flagellar basal-body rod protein FlgC [Terriglobus saanensis
           SP1PR4]
 gi|319925541|gb|ADV82616.1| flagellar basal-body rod protein FlgC [Terriglobus saanensis
           SP1PR4]
          Length = 152

 Score =  153 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 22/151 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L     I+ S L  Q  R ++++ N+ANA TT    G   Y RK +       G+     
Sbjct: 3   LFGMMDISASALHAQRVRAEVVATNMANAETTRTADGG-AYSRKHVLLASAESGNTFSSS 61

Query: 59  ----------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                           GGV V  +  D +  +  +DP HP A+  G V+YP++N L E  
Sbjct: 62  FRHAGSLLSTPSQTVEGGVDVTSVEGDGAPPIRRYDPSHPDADKDGFVEYPDINPLTEMV 121

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+    R Y  N   ++    M+  +LD+L+
Sbjct: 122 DLMGATRSYGLNATALQAEKGMVVASLDILK 152


>gi|21242729|ref|NP_642311.1| flagellar basal body rod protein FlgC [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|294625272|ref|ZP_06703911.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|294664589|ref|ZP_06729930.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|21108205|gb|AAM36847.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas axonopodis pv. citri str. 306]
 gi|268589170|gb|ACZ06861.1| flagella basal body rod protein [Xanthomonas axonopodis pv.
           glycines]
 gi|292600446|gb|EFF44544.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292605646|gb|EFF48956.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 135

 Score =  153 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 6/137 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA +   +  +  Y+     F+        
Sbjct: 1   MSNL-PIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEAT-YKPIEPIFQAQQSRQDP 58

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++
Sbjct: 59  SLTSVNVKEITTTNAPPIRRYEPGHPLADAEGYVFSPDVDPVSQMVNMISASRNYQAGVE 118

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  + ++   TL + R
Sbjct: 119 MLNTAKELALATLTMGR 135


>gi|325918875|ref|ZP_08180952.1| flagellar basal-body rod protein FlgC [Xanthomonas vesicatoria ATCC
           35937]
 gi|325534912|gb|EGD06831.1| flagellar basal-body rod protein FlgC [Xanthomonas vesicatoria ATCC
           35937]
          Length = 135

 Score =  153 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 6/137 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA +   +  +  Y+     F+        
Sbjct: 1   MSNL-PIFDVAGSALHAQSVRLSTIASNLANADSVAGSVEAT-YKPIEPIFQAQQSRQDP 58

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++
Sbjct: 59  SLTSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVE 118

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  + ++   TL + R
Sbjct: 119 MLNTAKELALATLTMGR 135


>gi|197103407|ref|YP_002128785.1| putative flagellar basal-body rod protein FlgC [Phenylobacterium
           zucineum HLK1]
 gi|196480683|gb|ACG80210.1| putative flagellar basal-body rod protein FlgC [Phenylobacterium
           zucineum HLK1]
          Length = 141

 Score =  153 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 57/128 (44%), Positives = 75/128 (58%), Gaps = 2/128 (1%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--MHGSGGVRVKK 65
             IA   L  Q ARM+II+ENIAN++TT  TPG DPYRR+   F  +    GS  V++ +
Sbjct: 12  MAIAAMALRAQQARMRIIAENIANSQTTAATPGGDPYRRQMPIFAPLKLEDGSVSVQLVR 71

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
              D + F +E+ PGHP A+ SG V   NV  LVE+ D +   R Y ANL  I  SH M 
Sbjct: 72  TEPDPTAFKKEYSPGHPAADPSGYVTLSNVETLVESLDFKAAQRAYEANLNVIDTSHAME 131

Query: 126 TTTLDLLR 133
            +T+ LL+
Sbjct: 132 QSTMRLLQ 139


>gi|254785369|ref|YP_003072798.1| flagellar basal body rod protein FlgC [Teredinibacter turnerae
           T7901]
 gi|237685992|gb|ACR13256.1| flagellar basal-body rod protein FlgC [Teredinibacter turnerae
           T7901]
          Length = 145

 Score =  153 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 15/144 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
           L    ++A SG+  QS R+   + NIA             YR +   F  V         
Sbjct: 3   LSNIFNVAGSGMNAQSIRLNTTASNIA-NAEASSASADTTYRGRHPVFASVQAAMLNGGD 61

Query: 56  ------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                   + GVRV  I   Q+     ++P  P A+  G V YPNVNV+ E  +M   +R
Sbjct: 62  ALYSEDQSAVGVRVDGIVESQAPLQPRYEPESPNADEDGYVYYPNVNVVEEMTNMISASR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            +  N++ +  +  M+   L L +
Sbjct: 122 SFQVNVEVMNSAKQMVQRVLTLGQ 145


>gi|89069822|ref|ZP_01157157.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus
           HTCC2516]
 gi|89044623|gb|EAR50739.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus
           HTCC2516]
          Length = 128

 Score =  153 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 56/134 (41%), Positives = 77/134 (57%), Gaps = 8/134 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  +  SGL  QSAR++ +SENIAN+ T G       YRRKT++F +    + G
Sbjct: 1   MSDFSQALDVVASGLRAQSARLRHVSENIANSDTPG-------YRRKTVTFRDAFGATAG 53

Query: 61  -VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            V V  + +D S     FDP HP+A+ SG  +  NV++L+E AD RE  R Y ANL+  +
Sbjct: 54  EVAVGPVRLDDSALERIFDPAHPLADESGHFEGSNVDLLIEIADAREAQRSYEANLKMFE 113

Query: 120 QSHDMMTTTLDLLR 133
           Q   M T+ LDLLR
Sbjct: 114 QVRQMSTSLLDLLR 127


>gi|323492340|ref|ZP_08097493.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
 gi|323313387|gb|EGA66498.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
          Length = 144

 Score =  153 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 IA S +  Q+ R+  ++ N+ANA      P  D Y+     F  V +       
Sbjct: 3   FTDIYSIAGSAMNAQTVRLNTVASNLANADAVSANPD-DAYKALKPVFATVYNKTQLTAS 61

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                +  VR+  +   +    + F+P +P+AN  G V YP+V+V+ E ADM    R + 
Sbjct: 62  EGAYPNAEVRIVDVVQSEGKAEKRFEPSNPLANDEGYVYYPDVDVVSEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N++ +     M    L L +
Sbjct: 122 TNVEVLTNVKSMQQGLLKLGQ 142


>gi|15606427|ref|NP_213807.1| flagellar biosynthesis FlgC [Aquifex aeolicus VF5]
 gi|6225342|sp|O67243|FLGC_AQUAE RecName: Full=Flagellar basal-body rod protein flgC
 gi|2983627|gb|AAC07195.1| flagellar biosynthesis FlgC [Aquifex aeolicus VF5]
          Length = 134

 Score =  153 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 8/137 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
           MD +  +  I+ SG+  Q  RM  ++ N+AN  +        P+ R    FE V +    
Sbjct: 2   MD-IFNALDISASGMYAQRIRMNTVASNLANYESFKS--DGTPFNRLVPVFEAVENLEDP 58

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V V++I      F   +DP +P A+  G V+ PN+  + E  DM    R Y ANL+
Sbjct: 59  SEVYVNVREIREVPG-FKLIYDPENPNADERGYVRLPNIEPVKEMVDMITAVRSYEANLK 117

Query: 117 TIKQSHDMMTTTLDLLR 133
               + ++   T +  +
Sbjct: 118 AFSLTKEIFERTFEAWK 134


>gi|21231399|ref|NP_637316.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768548|ref|YP_243310.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21113065|gb|AAM41240.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66573880|gb|AAY49290.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. 8004]
          Length = 135

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 6/137 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA +   +  +  Y+     F+   +    
Sbjct: 1   MSNL-PIFDVAGSALHAQSVRLSTIASNLANADSIAGSAEAT-YKPIEPIFQAQQNRQDP 58

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++
Sbjct: 59  SLTSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVE 118

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  + ++   TL + R
Sbjct: 119 MLNTAKELALATLTMGR 135


>gi|88704308|ref|ZP_01102022.1| flagellar basal body rod protein FlgC [Congregibacter litoralis
           KT71]
 gi|88701359|gb|EAQ98464.1| flagellar basal body rod protein FlgC [Congregibacter litoralis
           KT71]
          Length = 140

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 10/139 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
           L  +  +A + L  QS R+  IS N+ANA     +   + YR +   FE +         
Sbjct: 3   LFDAISVAATSLDAQSTRLNTISSNLANANAVSSS-AEETYRAQYPVFETMLNELSSANG 61

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           M    GVRV  I       V+E+ P HP+A+  G +  P +N + E A+M E +R Y  +
Sbjct: 62  MDAVAGVRVSGITQSDLPAVKEYVPTHPMADDEGFIYRPAINSVEEMANMMEASRSYQDS 121

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ +  +  ++  TL L R
Sbjct: 122 IEAMNTAKQLILRTLTLGR 140


>gi|88811799|ref|ZP_01127053.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
 gi|88791190|gb|EAR22303.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
          Length = 139

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------G 57
           L     +A S ++ Q+ R+ I + N+ANA T   TP    Y+ +   F   ++       
Sbjct: 5   LFDIFDVAGSAMSAQALRLNITASNMANADTVASTP-ERAYKARQPVFAAALNTAHDTVS 63

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V+++ +    +     + P +P+A+A G V   NVN +    +M   +R Y  N++ 
Sbjct: 64  AVPVQLRGVVTSSAAAEPLYQPNNPLADADGYVYRSNVNTVEAMVNMISASRSYQNNVEV 123

Query: 118 IKQSHDMMTTTLDLLR 133
           +  S D++  TL L R
Sbjct: 124 VSTSRDLLLQTLRLGR 139


>gi|289666045|ref|ZP_06487626.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 135

 Score =  153 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 6/137 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA +   +  +  Y+     F+        
Sbjct: 1   MSNL-PIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEAT-YKPIEPIFQAQQSRRDP 58

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++
Sbjct: 59  SLTSVNVKEITTTNAPPIRRYEPGHPLADAEGYVFSPDVDPVSQMVNMISASRNYQAGVE 118

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  + ++   TL + R
Sbjct: 119 MLNTAKELALATLTMGR 135


>gi|325921022|ref|ZP_08182904.1| flagellar basal-body rod protein FlgC [Xanthomonas gardneri ATCC
           19865]
 gi|325548504|gb|EGD19476.1| flagellar basal-body rod protein FlgC [Xanthomonas gardneri ATCC
           19865]
          Length = 135

 Score =  153 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 5/133 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GG 60
           +    +A S L  QS R+  I+ N+ANA +   +  +  Y+     F+   +        
Sbjct: 4   LPIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEAT-YKPIEPIFQARQNRQDPSLTS 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ +  
Sbjct: 63  VNVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVAQMVNMISASRNYQAGVEMLNT 122

Query: 121 SHDMMTTTLDLLR 133
           + ++   T+ + R
Sbjct: 123 AKELALATITMGR 135


>gi|85706171|ref|ZP_01037266.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217]
 gi|85669335|gb|EAQ24201.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217]
          Length = 130

 Score =  153 bits (387), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HG 57
           M     +  ++ SGL  Q+ R+  +SENIANA T G       YRRKT+SFE       G
Sbjct: 1   MSDFSNALSVSASGLKAQAQRLVHVSENIANADTPG-------YRRKTVSFETAFAGSEG 53

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +G V V ++ +D+    + +DP HP+A+ +G  +   V++++E AD RE  R Y ANL+ 
Sbjct: 54  TGAVEVSRVNLDRRELQKIYDPSHPLADETGHYQGSTVDLMIEIADAREAQRSYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
             Q   M    +DLLR
Sbjct: 114 FDQVRQMSAGLMDLLR 129


>gi|259417635|ref|ZP_05741554.1| flagellar basal-body rod protein FlgC [Silicibacter sp. TrichCH4B]
 gi|259346541|gb|EEW58355.1| flagellar basal-body rod protein FlgC [Silicibacter sp. TrichCH4B]
          Length = 130

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           M     S  +  SGL  Q+AR+  +SENI+NA T G       YRRKT+SF+ V      
Sbjct: 1   MSDFSKSLSVTASGLRAQAARLTHVSENISNADTPG-------YRRKTVSFQAVRDLETD 53

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V ++ +D+S   + +DP HP+A+ +G  +  NV++++E AD RE  R Y ANL+ 
Sbjct: 54  VSQVKVGRVSLDRSELEQVYDPSHPLADETGHYEGSNVDLMIEIADAREAQRTYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
             Q+  M ++ +DLLR
Sbjct: 114 FDQTRQMSSSLMDLLR 129


>gi|159045788|ref|YP_001534582.1| flagellar basal body rod protein FlgC [Dinoroseobacter shibae DFL
           12]
 gi|157913548|gb|ABV94981.1| flagellar basal-body rod protein FlgC [Dinoroseobacter shibae DFL
           12]
          Length = 130

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           M  L+ S  ++ SGL  Q+ R+ ++S+NIAN  T G       Y+RK   F+++     G
Sbjct: 1   MGDLLKSMTVSASGLMAQAQRLNVVSQNIANVDTPG-------YQRKQAEFQQMFDTFDG 53

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV V ++ +D S     +DP HP+A+ +G  +  NV+ +VE AD RE  R Y ANL++
Sbjct: 54  TDGVAVLRVSLDDSALKRIYDPSHPLADPTGYYEGSNVSTMVEVADAREAQRSYEANLRS 113

Query: 118 IKQSHDMMTTTLDLLR 133
              +  M  + L+LL+
Sbjct: 114 FDNARQMSRSLLELLK 129


>gi|2105146|gb|AAB57897.1| FlgC [Treponema denticola]
          Length = 151

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 21/150 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
           L  S +IA +G+ V+  R  +IS NIANA +     G  P++R  +              
Sbjct: 3   LFTSINIAATGMGVERLRTDVISNNIANASSLETQEGG-PFKRSRVIVGQKKSGIDWQTP 61

Query: 52  ---EEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETAD 103
              + V  G G GV+V  I  D S  V      HP A       G V+YPNVN++ E  D
Sbjct: 62  FTPQNVERGVGEGVKVLSIEKDTSDTVGFMIRTHPKALKYGPKEGYVEYPNVNIVTEMVD 121

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y ANL  +  + DM    LD+ R
Sbjct: 122 LISASRAYEANLAVVNGAKDMFQRALDIAR 151


>gi|194365682|ref|YP_002028292.1| flagellar basal body rod protein FlgC [Stenotrophomonas maltophilia
           R551-3]
 gi|254521317|ref|ZP_05133372.1| flagellar basal-body rod protein FlgC [Stenotrophomonas sp. SKA14]
 gi|194348486|gb|ACF51609.1| flagellar basal-body rod protein FlgC [Stenotrophomonas maltophilia
           R551-3]
 gi|219718908|gb|EED37433.1| flagellar basal-body rod protein FlgC [Stenotrophomonas sp. SKA14]
          Length = 135

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 6/137 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     IA S L  QS RM  I+ N++NA T   +  +  Y+     F+ V   +  
Sbjct: 1   MSNL-PIFDIAGSALQAQSVRMSTIASNLSNADTVAGSADA-VYKPLEPIFQAVTSKNDP 58

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+VK+I   ++  ++ ++PGHP+A+A G +  P+V+ + +  ++  T+R Y A ++
Sbjct: 59  NITSVKVKEITQSEAAPIKRYEPGHPLADADGYIYQPDVDPVAQMVNLISTSRNYQAGVE 118

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  + ++   TL + R
Sbjct: 119 MLTTAKELALATLTMGR 135


>gi|213026534|ref|ZP_03340981.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 108

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFE---EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           N+ANA +    P   PYR K + F+        +GGV+V  +   Q+     ++PG+P+A
Sbjct: 1   NLANADSV-TGPDGQPYRAKQVVFQVDAAPGQATGGVKVASVIESQAPEKLVYEPGNPLA 59

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +A+G VK PNV+V+ E  +    +R Y AN++ +     MM  TL L +
Sbjct: 60  DANGYVKMPNVDVVGEMVNTMSASRSYQANIEVLNTVKSMMLKTLTLGQ 108


>gi|229166585|ref|ZP_04294337.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH621]
 gi|228616839|gb|EEK73912.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH621]
          Length = 137

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI N  TTG  PG++PY R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNVNTTG-APGAEPYHRRSVVLESNNSFASMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     ++P HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIETDRNE-NLVYEPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|99082804|ref|YP_614958.1| flagellar basal body rod protein FlgC [Ruegeria sp. TM1040]
 gi|99039084|gb|ABF65696.1| Flagellar basal-body rod protein flgC [Ruegeria sp. TM1040]
          Length = 130

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           M     S  +  SGL  Q+AR+  +SENI+NA T G       YRRKT+SF+ V      
Sbjct: 1   MSDFSKSLSVTASGLRAQAARLTHVSENISNADTPG-------YRRKTVSFQSVRDLETD 53

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              VRV ++ +D++   + +DP HP+A+ +G  +  NV++++E AD RE  R Y ANL+ 
Sbjct: 54  VSQVRVGRVSLDRTELEQVYDPSHPLADETGHYEGSNVDLMIEIADAREAQRTYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
             Q+  M ++ +DLLR
Sbjct: 114 FDQTRQMSSSLMDLLR 129


>gi|149912830|ref|ZP_01901364.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b]
 gi|149813236|gb|EDM73062.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b]
          Length = 130

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  ++ SGL  Q+ R++ +SENIANA T G       YRRKT+SFE    G  G
Sbjct: 1   MSGFSESLSVSASGLKAQAQRLRHVSENIANADTPG-------YRRKTVSFEARAAGMSG 53

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V      ++ +D+S     ++P HP+A+ +G     NV +++E AD RE  R Y ANL+ 
Sbjct: 54  VHHVETGRVRLDRSDLARVYEPSHPMADETGHFDSSNVQLVIEIADAREAQRSYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
             Q+  M ++ +DLLR
Sbjct: 114 FDQARQMSSSLMDLLR 129


>gi|190574265|ref|YP_001972110.1| flagellar basal body rod protein FlgC [Stenotrophomonas maltophilia
           K279a]
 gi|190012187|emb|CAQ45810.1| putative flagellar basal-body rod protein FlgC [Stenotrophomonas
           maltophilia K279a]
          Length = 135

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 6/137 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     IA S L  QS RM  I+ N++NA T   +  +  Y+     F+ V   +  
Sbjct: 1   MSNL-PIFDIAGSALQAQSVRMSTIASNLSNADTVAGSADA-VYKPLEPIFQAVTSKNDP 58

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+VK+I    +  ++ ++PGHP+A+  G +  P+V+ + +  ++  T+R Y A ++
Sbjct: 59  NITSVKVKEITQSDAAPIKRYEPGHPLADGDGYIYQPDVDPVAQMVNLISTSRNYQAGVE 118

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  + ++   TL + R
Sbjct: 119 MLTTAKELALATLTMGR 135


>gi|163738064|ref|ZP_02145480.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
           BS107]
 gi|163742540|ref|ZP_02149926.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
           2.10]
 gi|161384125|gb|EDQ08508.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
           2.10]
 gi|161388680|gb|EDQ13033.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
           BS107]
          Length = 130

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           M     S  ++ S L  Q++R++ +SENI+NA T G       YRRKT+ FE V      
Sbjct: 1   MSEFSKSLSVSASALKAQASRLRHVSENISNADTPG-------YRRKTVPFEAVRDLRSD 53

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V  + +D+S   + FDP HP+A+ SG  +  NV++++E AD RE  R Y ANL+ 
Sbjct: 54  VEKVEVGPVRLDRSDLEQVFDPSHPLADESGHYEGSNVDLMIEIADAREAQRSYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
            +Q   M ++ +DLLR
Sbjct: 114 FEQGRQMSSSLMDLLR 129


>gi|283784083|ref|YP_003363948.1| lateral flagellar basal-body rod protein [Citrobacter rodentium
           ICC168]
 gi|282947537|emb|CBG87089.1| lateral flagellar basal-body rod protein [Citrobacter rodentium
           ICC168]
          Length = 143

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
                 I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V + S     
Sbjct: 3   FTDIYQISGSAMTAQTIRLNTVASNLANAEAPASSE-AQAYKARSPVFAAVYNNSLTGAH 61

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                    V+V+ +       V+ ++P HP+A+ +G V YP+VNV+ + ADM   +R +
Sbjct: 62  HRHAIDGASVQVQDVLQS-GGAVKRYEPHHPMADNNGYVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|254227981|ref|ZP_04921411.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
 gi|151939477|gb|EDN58305.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
          Length = 144

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
                 I  S +  Q+ R+  ++ N+ANA      P  D Y+     F  V   +     
Sbjct: 3   FTDIYSITGSAMTAQTVRLNTVASNLANADAVSANPD-DAYKALKPVFATVYQKAQLTTE 61

Query: 59  ------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                   VR+  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R + 
Sbjct: 62  NGVYPNAEVRIVDVVKNAGEAEKRFEPNNPLANGEGYVYYPDIDVVAEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N++ +     M    L L +
Sbjct: 122 TNVEVLSNVKSMQQGLLRLGQ 142


>gi|54307268|ref|YP_128288.1| FlgC flagellar basal-body rod protein [Photobacterium profundum
           SS9]
 gi|46911688|emb|CAG18486.1| Hypothetical FlgC flagellar basal-body rod protein [Photobacterium
           profundum SS9]
          Length = 138

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------HG 57
                 IA S ++ Q+ R+  ++ N+ANA     +  +  Y  K   F  VM        
Sbjct: 3   FSTIYDIAGSAMSAQTIRLNTVASNLANADVVSGSDKTG-YHAKRPVFSTVMIDMDSPVP 61

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V++  +          ++P HP AN  G V +  VNV+ E ADM   +R +  N+  
Sbjct: 62  GAKVQIDDVIESTEPLRRRYEPNHPKANNEGYVFHSTVNVVEEMADMMAASRNFETNVNV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           + ++  M  + L L +
Sbjct: 122 MSRARSMQQSILRLGQ 137


>gi|254255085|ref|ZP_04948402.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
 gi|124899730|gb|EAY71573.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
          Length = 133

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 3/133 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M      + IA S +A Q+ R+  I+ N+ANA T G       YR +   F  V  G G 
Sbjct: 1   MMSFKDISQIAGSAMAAQTVRLDTIASNLANADTAGT--EGTAYRARKPVFAAVYEGHGA 58

Query: 61  -VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            V+V  +         +++PG P+A+ +G+V Y NV+ + E  DM   +R +  N + + 
Sbjct: 59  RVQVLDVIELDDPPAAKYEPGSPLADENGMVYYSNVSAVEEMTDMMAASRAFSTNAEVLS 118

Query: 120 QSHDMMTTTLDLL 132
           +   M    L L 
Sbjct: 119 RVKAMQQDLLRLG 131


>gi|254466614|ref|ZP_05080025.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
           Y4I]
 gi|206687522|gb|EDZ48004.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
           Y4I]
          Length = 130

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           M     +  +  SGL  Q+AR++ +SENI+NA T G       YRRK + FE V      
Sbjct: 1   MSEFSKALSVTASGLKAQAARLRHVSENISNADTPG-------YRRKAVPFESVRELRTD 53

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              VR  ++ +D+S   + +DP HP+A+ SG  +  NV++++E AD RE  R Y ANL+ 
Sbjct: 54  VEHVRTGRVTLDRSELEKVYDPSHPLADESGHFEGSNVDLMIEIADAREAQRSYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
            +Q+  M  + ++LLR
Sbjct: 114 FEQTRSMSASLMELLR 129


>gi|152975156|ref|YP_001374673.1| flagellar basal body rod protein FlgC [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023908|gb|ABS21678.1| flagellar basal-body rod protein FlgC [Bacillus cytotoxicus NVH
           391-98]
          Length = 137

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           +  + + + SGL      M++ S+NI NA TT   P  +PYRR+++  E   +       
Sbjct: 1   MFQAINASGSGLTAARKWMEVSSDNIVNANTT-SAPDGEPYRRRSVVLESNRNFASMLKE 59

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             + GV++ +I  D +     ++P HP ANA G V+YPN+++  E  ++    ++Y AN 
Sbjct: 60  APNDGVKITRIESDPNE-NLVYNPSHPHANAEGYVRYPNIDMTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|325109010|ref|YP_004270078.1| flagellar basal-body rod protein FlgC [Planctomyces brasiliensis
           DSM 5305]
 gi|324969278|gb|ADY60056.1| flagellar basal-body rod protein FlgC [Planctomyces brasiliensis
           DSM 5305]
          Length = 133

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 3/132 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVMHG--SGG 60
           +  +  I  SGL  Q  R+  I+EN+AN +TT D  G+  P++R+ ++F        + G
Sbjct: 1   MFRTIDIITSGLVAQRQRLNTIAENVANQQTTRDAEGNVSPFQRRFVTFAADSDSTEAAG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+ +    DQ+     ++PGHP ANA G V YP +N++ E  +  E +R Y AN+ +   
Sbjct: 61  VKFEVEKDDQTPPRLVYEPGHPDANAEGYVAYPAINMVTEFVNAMEASRAYEANVVSFST 120

Query: 121 SHDMMTTTLDLL 132
           +  +    L +L
Sbjct: 121 TQKIGEMALRIL 132


>gi|120597303|ref|YP_961877.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|146294552|ref|YP_001184976.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
           CN-32]
 gi|120557396|gb|ABM23323.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|145566242|gb|ABP77177.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
           CN-32]
          Length = 138

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 7/133 (5%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------G 59
               IA +G+  Q+ R+  ++ N+ANA    +TP S  YR     F  +   +       
Sbjct: 5   DIYQIAGAGMNAQTIRLNTVASNLANAGAAAETPES-AYRALKPVFATIYDSTQQGAIGA 63

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            + V  I    +     ++P HP AN  G V Y NVN + E ADM   +R +  +++ + 
Sbjct: 64  SIEVSDIVQADAPLDMRYEPNHPFANEQGYVAYSNVNTIEEMADMMAASRSFETSVEVMN 123

Query: 120 QSHDMMTTTLDLL 132
           ++  M    L L 
Sbjct: 124 RARSMQQGLLQLG 136


>gi|89072317|ref|ZP_01158896.1| flagellar basal body rod protein [Photobacterium sp. SKA34]
 gi|89051849|gb|EAR57301.1| flagellar basal body rod protein [Photobacterium sp. SKA34]
          Length = 144

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 12/140 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 IA S +  Q+ R+  ++ N+ANA      P  D Y+     F  V +       
Sbjct: 3   FTDIYSIAGSAMNAQTIRLNTVASNLANADAVAANPD-DAYKALKPVFATVYNKTQLTGE 61

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                S  VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R + 
Sbjct: 62  QADYPSAEVRIMDVVQHAGDAEKRFEPSNPLANEEGYVYYPDIDVVAEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
            N++ +     M    L L 
Sbjct: 122 TNVEVLSNVKSMQQGLLRLG 141


>gi|28900120|ref|NP_799775.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153837089|ref|ZP_01989756.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|260365770|ref|ZP_05778266.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|260880692|ref|ZP_05893047.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|260897702|ref|ZP_05906198.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|260899387|ref|ZP_05907782.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|1272366|gb|AAA97474.1| LfgC [Vibrio parahaemolyticus]
 gi|28808403|dbj|BAC61608.1| LfgC [Vibrio parahaemolyticus RIMD 2210633]
 gi|149749677|gb|EDM60422.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|308086219|gb|EFO35914.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|308092577|gb|EFO42272.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|308109204|gb|EFO46744.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|308114992|gb|EFO52532.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|328470099|gb|EGF41010.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus
           10329]
          Length = 144

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 I  S +  Q+ R+  ++ N+ANA      P  D Y+     F  V         
Sbjct: 3   FTDIYSITGSAMTAQTVRLNTVASNLANADAVSANPD-DAYKALKPVFATVYQKTQMTTE 61

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                +  VR+  +  ++    + F+P +P+AN  G V YP+++V+ E ADM    R + 
Sbjct: 62  NGIYPNAEVRIVDVVQNKGQAEKRFEPNNPLANGEGYVYYPDIDVVAEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N++ +     M    L L +
Sbjct: 122 TNVEVLANVKSMQQGLLRLGQ 142


>gi|260428875|ref|ZP_05782852.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45]
 gi|260419498|gb|EEX12751.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45]
          Length = 130

 Score =  150 bits (380), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 53/136 (38%), Positives = 78/136 (57%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  +++SGL  Q++R++I+SENIAN  T G       Y RKTI FE   +   G
Sbjct: 1   MSDFSNALSVSSSGLRAQASRLRIVSENIANVDTPG-------YHRKTIPFETSGNARDG 53

Query: 61  VRVKKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V++ + G    D+S     +DP HP+A+ +G     NV+++VE AD RE  R Y ANL+ 
Sbjct: 54  VQMVETGRVDLDRSDLERIYDPQHPLADEAGFYDGTNVDLIVELADAREAQRSYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
            +Q+  M +  LDLLR
Sbjct: 114 FEQTRQMSSNLLDLLR 129


>gi|167725928|ref|ZP_02409164.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           DM98]
 gi|167905088|ref|ZP_02492293.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           NCTC 13177]
          Length = 125

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 8/126 (6%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------GSGGVRVKKIG 67
           ++ Q+ R+  I+ N+ANA +   T  +  YR +   F  +             V+V  + 
Sbjct: 1   MSAQTVRLNTIASNLANADSASGTEDAT-YRARKPVFASIFQLDAQGEPRGAAVQVLDVV 59

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                  +   PGHP+A+A G V YPNVN + E  DM   +R Y  N++ + + + M   
Sbjct: 60  KSTEPLRKVHQPGHPLADAEGNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNGMQLE 119

Query: 128 TLDLLR 133
            L L +
Sbjct: 120 LLKLGQ 125


>gi|269961597|ref|ZP_06175959.1| Flagellar basal-body rod protein flgC [Vibrio harveyi 1DA3]
 gi|269833638|gb|EEZ87735.1| Flagellar basal-body rod protein flgC [Vibrio harveyi 1DA3]
          Length = 124

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 7/125 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GG----VRVKKIGV 68
           ++ +S R+   S N+ANA +   +   D Y+ +   F   +  +  GG    V+V  I  
Sbjct: 1   MSAESVRLNTTSSNLANADSVSSS-AKDTYKARHAVFGAELSNAMRGGDTVPVKVMGIVE 59

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                  E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S  M+  T
Sbjct: 60  SDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRT 119

Query: 129 LDLLR 133
           L + +
Sbjct: 120 LQMGQ 124


>gi|157147104|ref|YP_001454423.1| flagellar basal body rod protein FlgC [Citrobacter koseri ATCC
           BAA-895]
 gi|157084309|gb|ABV13987.1| hypothetical protein CKO_02881 [Citrobacter koseri ATCC BAA-895]
          Length = 141

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 12/139 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
                 ++ S +  Q+ R+  I+ N+ANA T   T     Y+ +   F  V         
Sbjct: 3   FTDIYRVSGSAMTAQTVRLNTIASNLANAETASATEDG-VYKARRPVFAAVYKNDELMNS 61

Query: 58  ----SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                  V+V  +       V+ ++P +P+AN  G V YP+VNV+ E ADM   +R +  
Sbjct: 62  RALTGARVQVMDVVE-TGNAVQRYEPHNPMANTDGYVYYPDVNVVEEMADMMSASRGFET 120

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N+  +     M  + L L 
Sbjct: 121 NVDVLNSVKSMQQSLLRLG 139


>gi|126176158|ref|YP_001052307.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
 gi|304412510|ref|ZP_07394116.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|307307169|ref|ZP_07586907.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
 gi|125999363|gb|ABN63438.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
 gi|304349152|gb|EFM13564.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|306910408|gb|EFN40839.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
          Length = 138

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 7/133 (5%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------G 59
               IA +G+  Q+ R+  ++ N+ANA T  + P S  YR     F  +   +       
Sbjct: 5   DIYQIAGAGMNAQTIRLNTVASNLANAGTAAENPES-AYRALKPVFATIYDSTQQGAIGA 63

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            + V  I    +     ++P HP AN  G V Y NVN + E ADM   +R +  +++ + 
Sbjct: 64  SIEVSDIVQADAPLDMRYEPNHPFANEQGYVAYSNVNTIEEMADMMAASRSFETSVEIMN 123

Query: 120 QSHDMMTTTLDLL 132
           ++  M    L L 
Sbjct: 124 RARSMQQGLLQLG 136


>gi|289670504|ref|ZP_06491579.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 135

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 6/137 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L   S R+  I+ N+ANA +   +  +  Y+     F+        
Sbjct: 1   MSNL-PIFDVAGSALHAHSVRLSTIASNLANADSVAGSAEAT-YKPIEPIFQAQQSRRDP 58

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M  T+R Y A ++
Sbjct: 59  SLTSVNVKEITTTNAPPIRRYEPGHPLADAEGYVFSPDVDPVSQMVNMISTSRNYQAGVE 118

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  + ++   TL + R
Sbjct: 119 MLNTAKELALATLTMGR 135


>gi|260779349|ref|ZP_05888241.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605513|gb|EEX31808.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 144

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
                 IA S +  Q+ R+  ++ N+ANA      P  D Y+     F  V         
Sbjct: 3   FTDIYSIAGSAMNAQTVRLNTVASNLANADAVSANPD-DAYKALKPVFATVYSKTQLSAS 61

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
              + +  VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R + 
Sbjct: 62  KESYPNAEVRIVDVVQSAGQAEKRFEPSNPLANDEGYVYYPDIDVVSEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N++ +     M    L L +
Sbjct: 122 TNVEVLSNVKSMQQGLLRLGQ 142


>gi|261341496|ref|ZP_05969354.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316292|gb|EFC55230.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
          Length = 141

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
                 ++ S +  Q+ R+  I+ N+ANA T     G + Y+ +   F  V         
Sbjct: 3   FSDIYRVSGSAMTAQTVRLNTIASNLANAETPAVDEG-NVYKARRPVFAAVYQNDELMSD 61

Query: 59  ---GGVRVKKIGVDQS-TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
               G RV+ + V +S   V+ ++P HP+AN  G V YP++NV+ E ADM   +R +  N
Sbjct: 62  KALSGARVQVLDVVESGNAVQRYEPHHPMANPDGYVWYPDINVVEEMADMMSASRNFETN 121

Query: 115 LQTIKQSHDMMTTTLDLL 132
           +  +     M  + L L 
Sbjct: 122 VDVLNNVKSMQQSLLRLG 139


>gi|327478807|gb|AEA82117.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri DSM
           4166]
          Length = 142

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 11/137 (8%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--------- 56
           +   IA S +  Q+ R+  ++ N+AN  +    P +D Y+ +   F  V           
Sbjct: 5   SIYRIAGSSMNAQTVRLNTVASNLANTDSAAANP-ADVYQARKPMFAAVYENNSLTRGVG 63

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
            G   V+V  +    +     ++PG+P+A+  G V YP++N + E  DM    R +   +
Sbjct: 64  LGGAHVQVLDVVTSGAEPKRRYEPGNPLADGEGYVYYPDINEIEEMTDMMSATRSFETGV 123

Query: 116 QTIKQSHDMMTTTLDLL 132
           + + +   M  + L L 
Sbjct: 124 EVLNRVKSMQQSLLRLG 140


>gi|296124187|ref|YP_003631965.1| flagellar basal-body rod protein FlgC [Planctomyces limnophilus DSM
           3776]
 gi|296016527|gb|ADG69766.1| flagellar basal-body rod protein FlgC [Planctomyces limnophilus DSM
           3776]
          Length = 137

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEV------MH 56
           +  +  I+ SGL  Q  RM  I+ NIAN  TT +  G   P++R+ +  +          
Sbjct: 1   MFHTLDISTSGLIAQRTRMDTIAGNIANVNTTQNEEGKIAPFQRRLVMMQPASVGATSPT 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           GS GV         S     ++PGHP ANA G V YPN+NV+ E  +  E +R Y AN+ 
Sbjct: 61  GSQGVASTVEIDTVSPPRMAYEPGHPHANAEGKVLYPNINVVTEFVNAMEASRAYEANVT 120

Query: 117 TIKQSHDMMTTTLDLL 132
           T++ + DM+  T  LL
Sbjct: 121 TMEVTKDMIQNTFRLL 136


>gi|149189834|ref|ZP_01868114.1| flagellar basal body rod protein [Vibrio shilonii AK1]
 gi|148836320|gb|EDL53277.1| flagellar basal body rod protein [Vibrio shilonii AK1]
          Length = 144

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 12/140 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
                 IA S +  Q+ R+  ++ N+ANA      P  D Y+     F  V         
Sbjct: 3   FTDIYSIAGSAMTAQTVRLNTVASNLANADAVSANPD-DAYKALKPVFATVYSQTQLAAG 61

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
              + +  VR+  +    +   + F+P +P+AN  G V YP V+V+ E ADM    R + 
Sbjct: 62  QNVYPNAEVRIVDVVQSDAKADQRFEPNNPLANEEGYVYYPGVDVVAEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
            N++ +     M    L L 
Sbjct: 122 TNVEVLANVKSMQQGLLRLG 141


>gi|167567748|ref|ZP_02360664.1| flagellar basal-body rod protein FlgC [Burkholderia oklahomensis
           EO147]
 gi|167574699|ref|ZP_02367573.1| flagellar basal-body rod protein FlgC [Burkholderia oklahomensis
           C6786]
          Length = 138

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
               A IA S +A Q+ R+  I+ N+ANA     T  S  YR +   F  +         
Sbjct: 3   FKDIAQIAGSAMAAQTVRLNTIASNLANADAASSTEAST-YRARKPVFASIFKVGADGEV 61

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  +        +   PG+P+A+A G V YPNV+ + E  DM  + R Y  N++
Sbjct: 62  NGAAVQVLDVVQSTEPLRKVHQPGNPLADADGNVLYPNVDPVEEMTDMLSSTRAYSTNVE 121

Query: 117 TIKQSHDMMTTTLDLLR 133
            + + + M    L L +
Sbjct: 122 VLGRVNGMQMELLKLGQ 138


>gi|310816827|ref|YP_003964791.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare
           Y25]
 gi|308755562|gb|ADO43491.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare
           Y25]
          Length = 127

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 54/133 (40%), Positives = 73/133 (54%), Gaps = 7/133 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  IA SG+  Q++RM+  SENIANA T G       Y RK +SF       G 
Sbjct: 1   MADFSTTLSIAASGMQAQASRMRFTSENIANADTPG-------YHRKLVSFRAAHANDGT 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V   ++ +D++   E +DP HP+AN  G     NV++L+E AD RE +R Y ANL+   Q
Sbjct: 54  VEASRVRLDRAPLAEIYDPAHPLANDQGNYSGSNVDLLIEIADAREASRSYEANLKVFDQ 113

Query: 121 SHDMMTTTLDLLR 133
              M T+ LDLLR
Sbjct: 114 VRQMSTSLLDLLR 126


>gi|238752868|ref|ZP_04614333.1| Flagellar basal-body rod protein FlgC [Yersinia rohdei ATCC 43380]
 gi|238708907|gb|EEQ01160.1| Flagellar basal-body rod protein FlgC [Yersinia rohdei ATCC 43380]
          Length = 141

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 12/137 (8%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG----- 60
               I+ S +  Q+ R+  I+ N+ANA +   +  +  Y+ ++  F  V           
Sbjct: 5   NIYRISGSAMTAQTIRLNTIASNLANAESPAASE-ATVYKARSPVFSAVYSPRSAAAPGG 63

Query: 61  -----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                V+V  +       V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  N+
Sbjct: 64  VGGAQVQVLDVVE-TGGSVQRYEPNHPLANPQGYVFYPQVNVVSEMADMMSASRSFETNV 122

Query: 116 QTIKQSHDMMTTTLDLL 132
           + +     M  + L L 
Sbjct: 123 EVLNSVKSMQQSVLRLG 139


>gi|90577342|ref|ZP_01233153.1| flagellar basal body rod protein [Vibrio angustum S14]
 gi|90440428|gb|EAS65608.1| flagellar basal body rod protein [Vibrio angustum S14]
          Length = 144

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 12/140 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 IA S +  Q+ R+  ++ N+ANA      P  D Y+     F  V +       
Sbjct: 3   FTDIYSIAGSAMNAQTIRLNTVASNLANADAVAANPN-DAYKALKPVFATVYNKTQLTGD 61

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                S  VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R + 
Sbjct: 62  QADYPSAEVRIMDVVQHAGEAEKRFEPSNPLANEEGYVYYPDIDVVAEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
            N++ +     M    L L 
Sbjct: 122 TNVEVLSNVKSMQQGLLRLG 141


>gi|228907377|ref|ZP_04071235.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           200]
 gi|228852238|gb|EEM97034.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           200]
          Length = 137

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGTDLYERRSVVLESNNSFASMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           S   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  SPTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|255264378|ref|ZP_05343720.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62]
 gi|255106713|gb|EET49387.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62]
          Length = 130

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HG 57
           M     S  I+ SG+A Q+ R++  SENIANA T G       YRRKT SFE ++     
Sbjct: 1   MSDFSNSLAISASGMAAQTDRLRFTSENIANADTPG-------YRRKTTSFEAIVEQGQS 53

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +G V    + +D++     FDP HP+A+ASG  +  NV++L+E AD RE  R Y ANL+ 
Sbjct: 54  TGAVTTGPMVLDKTELDRVFDPSHPMADASGYYQGTNVDLLIEIADAREAQRSYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
             QS  M ++ ++LLR
Sbjct: 114 FDQSRQMSSSLMELLR 129


>gi|54297180|ref|YP_123549.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Paris]
 gi|53750965|emb|CAH12376.1| Flagellar basal-body rod protein FlgC [Legionella pneumophila str.
           Paris]
          Length = 140

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L A   IA S +  ++ R+   + N++NA     +P  + Y+ K   F+ V   +     
Sbjct: 3   LNAIFDIAASAMTAETVRLTTSAGNMSNANVEAGSPD-EVYQAKYPVFKSVQENANQWIG 61

Query: 59  ----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                GV++  I    +     +DP  P+A+  G V   N+N + E A++   +R Y  N
Sbjct: 62  EQIKAGVKLDGIYQSDAEPHRRYDPNSPIADKDGFVYTSNINYVEEMANIISASRSYQMN 121

Query: 115 LQTIKQSHDMMTTTLDLL 132
           ++ +  +  +M  TL L 
Sbjct: 122 IELLNTTKQLMQRTLQLG 139


>gi|52841449|ref|YP_095248.1| flagellar basal body rod protein FlgC [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|54294161|ref|YP_126576.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Lens]
 gi|148358804|ref|YP_001250011.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Corby]
 gi|296106849|ref|YP_003618549.1| flagellar basal-body rod protein FlgC [Legionella pneumophila
           2300/99 Alcoy]
 gi|52628560|gb|AAU27301.1| flagellar basal body rod protein FlgC [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|53753993|emb|CAH15464.1| Flagellar basal-body rod protein FlgC [Legionella pneumophila str.
           Lens]
 gi|148280577|gb|ABQ54665.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Corby]
 gi|295648750|gb|ADG24597.1| flagellar basal-body rod protein FlgC [Legionella pneumophila
           2300/99 Alcoy]
 gi|307609975|emb|CBW99504.1| flagellar basal-body rod protein FlgC [Legionella pneumophila 130b]
          Length = 140

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L A   IA S +  ++ R+   + N++NA     +P  + Y+ K   F+ V   +     
Sbjct: 3   LNAIFDIAASAMTAETVRLTTSAGNMSNANVEAGSPD-EVYQAKYPVFKSVQENANQWMG 61

Query: 59  ----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                GV++  I    +     +DP  P+A+  G V   N+N + E A++   +R Y  N
Sbjct: 62  EQIKAGVKLDGIYESDAEPHRRYDPNSPIADKDGFVYTSNINYVEEMANIISASRSYQMN 121

Query: 115 LQTIKQSHDMMTTTLDLL 132
           ++ +  +  +M  TL L 
Sbjct: 122 IELLNTTKQLMQRTLQLG 139


>gi|75761144|ref|ZP_00741136.1| Flagellar basal-body rod protein flgC [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|206970905|ref|ZP_03231857.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH1134]
 gi|218896677|ref|YP_002445088.1| flagellar basal-body rod protein FlgC [Bacillus cereus G9842]
 gi|228900326|ref|ZP_04064556.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           4222]
 gi|228920455|ref|ZP_04083800.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228952124|ref|ZP_04114219.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228958024|ref|ZP_04119760.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229069296|ref|ZP_04202586.1| Flagellar basal-body rod protein FlgC [Bacillus cereus F65185]
 gi|229078926|ref|ZP_04211478.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock4-2]
 gi|229109201|ref|ZP_04238800.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-15]
 gi|229127070|ref|ZP_04256069.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-Cer4]
 gi|229149946|ref|ZP_04278174.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1550]
 gi|229178153|ref|ZP_04305524.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 172560W]
 gi|229189841|ref|ZP_04316852.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10876]
 gi|74491372|gb|EAO54596.1| Flagellar basal-body rod protein flgC [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|206734541|gb|EDZ51711.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH1134]
 gi|218541427|gb|ACK93821.1| flagellar basal-body rod protein FlgC [Bacillus cereus G9842]
 gi|228593649|gb|EEK51457.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10876]
 gi|228605283|gb|EEK62733.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 172560W]
 gi|228633627|gb|EEK90228.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1550]
 gi|228656423|gb|EEL12262.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-Cer4]
 gi|228674211|gb|EEL29456.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-15]
 gi|228704340|gb|EEL56774.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock4-2]
 gi|228713783|gb|EEL65668.1| Flagellar basal-body rod protein FlgC [Bacillus cereus F65185]
 gi|228801649|gb|EEM48530.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228807656|gb|EEM54180.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228839085|gb|EEM84381.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228859361|gb|EEN03791.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           4222]
          Length = 137

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|229043498|ref|ZP_04191208.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH676]
 gi|229144356|ref|ZP_04272762.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST24]
 gi|296502344|ref|YP_003664044.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           BMB171]
 gi|228639143|gb|EEK95567.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST24]
 gi|228725876|gb|EEL77123.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH676]
 gi|296323396|gb|ADH06324.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           BMB171]
          Length = 137

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGTDLYERRSVVLESNNSFASMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|90415320|ref|ZP_01223254.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2207]
 gi|90332643|gb|EAS47813.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2207]
          Length = 141

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 10/139 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +     IA S +  Q  RM   + N+ANA T   +   D ++ K   F+ ++        
Sbjct: 3   ISNIFGIAASAMNAQMVRMNSTASNMANAGTVSSS-AEDAFKAKRPVFQALLQEHQLDQG 61

Query: 59  ----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
               GGV+V  +  D +   +  DPG+P+A+  G V   NVN + E  +M    R Y  N
Sbjct: 62  SQFLGGVKVLDMVDDTAPNKKMHDPGNPLADKDGFVFSSNVNEVTEMVEMMGAARSYQNN 121

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ +  + ++M  TLD+ +
Sbjct: 122 VEVVNTARELMMRTLDITK 140


>gi|330447901|ref|ZP_08311549.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492092|dbj|GAA06046.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 144

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 12/140 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
                 IA S +  Q+ R+  ++ N+ANA      P  D Y+     F  V         
Sbjct: 3   FTDIYAIAGSAMNAQTIRLNTVASNLANADAVAANPD-DAYQALKPVFATVYGKTQLTGE 61

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
              + S  VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R + 
Sbjct: 62  QANYPSAEVRIMDVVQHAGEAEKRFEPSNPLANEEGYVYYPDIDVVAEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
            N++ +     M    L L 
Sbjct: 122 TNVEVLSNVKSMQQGLLRLG 141


>gi|229096230|ref|ZP_04227203.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-29]
 gi|229102343|ref|ZP_04233051.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-28]
 gi|229115185|ref|ZP_04244595.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-3]
 gi|228668325|gb|EEL23757.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-3]
 gi|228680990|gb|EEL35159.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-28]
 gi|228687190|gb|EEL41095.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-29]
          Length = 137

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++ G
Sbjct: 1   MFQAMNASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|114762160|ref|ZP_01441628.1| flagellar basal-body rod protein FlgC [Pelagibaca bermudensis
           HTCC2601]
 gi|114545184|gb|EAU48187.1| flagellar basal-body rod protein FlgC [Roseovarius sp. HTCC2601]
          Length = 130

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 9/135 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--EVMHGS 58
           M     +  +++SGL  Q+ R++++SENIAN  T G       YRRKT+ FE  E   G 
Sbjct: 1   MSAFSDALSVSSSGLRAQADRLRVVSENIANVDTPG-------YRRKTLPFELGEGSDGV 53

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+     +D+S     +DP HP+A+ +G     NV+++VE AD RE  R Y ANL+  
Sbjct: 54  REVQAGDTRLDRSDLERIWDPHHPLADPAGFYDGTNVDLIVELADAREAQRSYEANLKMF 113

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+  M ++ +DLLR
Sbjct: 114 EQTRQMSSSLMDLLR 128


>gi|86139479|ref|ZP_01058048.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193]
 gi|85823982|gb|EAQ44188.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193]
          Length = 130

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  +  SGL  Q+ R++ +SENI+NA T G       YRRK++ FE        
Sbjct: 1   MSEFSNSLSVTASGLKAQATRLRHVSENISNADTPG-------YRRKSVPFEAARDLEND 53

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   +  ++ +D+S     +DP HP+A+ SG  +  NV++++E AD RE  R Y ANL+ 
Sbjct: 54  VERVKTGRVVLDRSDLENVYDPSHPLADESGHYEGSNVDLMIEIADAREAQRSYDANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
            +Q+  M  + +DLLR
Sbjct: 114 FEQTRGMSASLMDLLR 129


>gi|118477180|ref|YP_894331.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis str.
           Al Hakam]
 gi|118416405|gb|ABK84824.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 137

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           S   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  SLTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|153831731|ref|ZP_01984398.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|156976139|ref|YP_001447045.1| flagellar basal body rod protein FlgC [Vibrio harveyi ATCC
           BAA-1116]
 gi|269960114|ref|ZP_06174490.1| Flagellar basal-body rod protein C [Vibrio harveyi 1DA3]
 gi|148872241|gb|EDL71058.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|156527733|gb|ABU72818.1| hypothetical protein VIBHAR_04910 [Vibrio harveyi ATCC BAA-1116]
 gi|269835085|gb|EEZ89168.1| Flagellar basal-body rod protein C [Vibrio harveyi 1DA3]
          Length = 144

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 I  S +  Q+ R+  ++ N+ANA      P  D Y+     F  V         
Sbjct: 3   FTDIYSITGSAMTAQTVRLNTVASNLANADAVSANPD-DAYKALKPVFATVYQKTQMATE 61

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                +  VR+  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R + 
Sbjct: 62  NGVYPNAEVRIVDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVVSEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N++ +     M    L L +
Sbjct: 122 TNVEVLTNVKSMQQGLLRLGQ 142


>gi|218230982|ref|YP_002366429.1| flagellar basal body rod protein FlgC [Bacillus cereus B4264]
 gi|218158939|gb|ACK58931.1| flagellar basal-body rod protein FlgC [Bacillus cereus B4264]
          Length = 137

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANKEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|262273531|ref|ZP_06051345.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
 gi|262222509|gb|EEY73820.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
          Length = 126

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 7/125 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----HGSGG--VRVKKIGV 68
           +A Q+ R+  ++ N+ANA     +  +  YR K   FE VM    +G+ G  VRVK++  
Sbjct: 1   MAAQTVRLNAVASNLANADVVSGSEQTG-YRAKRPVFETVMVDKGNGTQGAMVRVKEVLE 59

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             +     ++P HP+AN  G V Y  VN + E ADM   +R +  N+  + ++  M  + 
Sbjct: 60  SDAPLQRRYEPNHPLANKEGYVFYSQVNPVEEMADMMSASRNFETNVDVMTRARSMQQSI 119

Query: 129 LDLLR 133
           L L +
Sbjct: 120 LRLGQ 124


>gi|229017032|ref|ZP_04173952.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1273]
 gi|229023213|ref|ZP_04179724.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1272]
 gi|228738138|gb|EEL88623.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1272]
 gi|228744303|gb|EEL94385.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1273]
          Length = 137

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + S L      M++ S NI NA TTG  P ++PY R+++       F  ++ G
Sbjct: 1   MFQAINASGSALTTARKWMEVTSNNIVNANTTG-APDAEPYHRRSVVLESNNNFANMLEG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     +DP HP AN  G V+YPN+NV  E  ++    ++Y AN 
Sbjct: 60  APANGVKIKSIETDRNE-NLVYDPTHPHANEEGYVRYPNINVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|47566127|ref|ZP_00237165.1| flagellar basal-body rod protein flgC [Bacillus cereus G9241]
 gi|206974761|ref|ZP_03235676.1| flagellar basal-body rod protein FlgC [Bacillus cereus H3081.97]
 gi|217959228|ref|YP_002337776.1| flagellar basal body rod protein FlgC [Bacillus cereus AH187]
 gi|229138444|ref|ZP_04267033.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST26]
 gi|47557044|gb|EAL15374.1| flagellar basal-body rod protein flgC [Bacillus cereus G9241]
 gi|206746780|gb|EDZ58172.1| flagellar basal-body rod protein FlgC [Bacillus cereus H3081.97]
 gi|217065314|gb|ACJ79564.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH187]
 gi|228644981|gb|EEL01224.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST26]
          Length = 137

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLEG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     +DP HP AN  G V+YPNV+V  E  ++    ++Y AN 
Sbjct: 60  TPTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNVDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|30261743|ref|NP_844120.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Ames]
 gi|47526963|ref|YP_018312.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184573|ref|YP_027825.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Sterne]
 gi|49480942|ref|YP_035864.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|52143711|ref|YP_083115.1| flagellar basal body rod protein FlgC [Bacillus cereus E33L]
 gi|65319012|ref|ZP_00391971.1| COG1558: Flagellar basal body rod protein [Bacillus anthracis str.
           A2012]
 gi|165869530|ref|ZP_02214189.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0488]
 gi|167633252|ref|ZP_02391577.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0442]
 gi|170686301|ref|ZP_02877523.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0465]
 gi|170706453|ref|ZP_02896913.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0389]
 gi|190566322|ref|ZP_03019240.1| flagellar basal-body rod protein FlgC [Bacillus anthracis
           Tsiankovskii-I]
 gi|196038959|ref|ZP_03106266.1| flagellar basal-body rod protein FlgC [Bacillus cereus NVH0597-99]
 gi|218902859|ref|YP_002450693.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH820]
 gi|227815498|ref|YP_002815507.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. CDC
           684]
 gi|228914323|ref|ZP_04077938.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228926780|ref|ZP_04089848.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228933028|ref|ZP_04095891.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228945347|ref|ZP_04107702.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229090705|ref|ZP_04221938.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-42]
 gi|229121296|ref|ZP_04250527.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 95/8201]
 gi|229155315|ref|ZP_04283426.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 4342]
 gi|229602307|ref|YP_002866143.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0248]
 gi|254683233|ref|ZP_05147094.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723821|ref|ZP_05185607.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           A1055]
 gi|254740994|ref|ZP_05198682.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Kruger B]
 gi|254755237|ref|ZP_05207271.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Vollum]
 gi|254759773|ref|ZP_05211797.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Australia 94]
 gi|300117337|ref|ZP_07055127.1| flagellar basal body rod protein FlgC [Bacillus cereus SJ1]
 gi|301053281|ref|YP_003791492.1| flagellar basal body rod protein [Bacillus anthracis CI]
 gi|30255971|gb|AAP25606.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           Ames]
 gi|47502111|gb|AAT30787.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178500|gb|AAT53876.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           Sterne]
 gi|49332498|gb|AAT63144.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51977180|gb|AAU18730.1| flagellar basal-body rod protein [Bacillus cereus E33L]
 gi|164714970|gb|EDR20488.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0488]
 gi|167531290|gb|EDR93968.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0442]
 gi|170128551|gb|EDS97418.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0389]
 gi|170669998|gb|EDT20739.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0465]
 gi|190562457|gb|EDV16424.1| flagellar basal-body rod protein FlgC [Bacillus anthracis
           Tsiankovskii-I]
 gi|196030104|gb|EDX68704.1| flagellar basal-body rod protein FlgC [Bacillus cereus NVH0597-99]
 gi|218535692|gb|ACK88090.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH820]
 gi|227007024|gb|ACP16767.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. CDC
           684]
 gi|228628240|gb|EEK84956.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 4342]
 gi|228662141|gb|EEL17750.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 95/8201]
 gi|228692647|gb|EEL46373.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-42]
 gi|228814319|gb|EEM60585.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228826629|gb|EEM72400.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228832893|gb|EEM78462.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228845317|gb|EEM90353.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229266715|gb|ACQ48352.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0248]
 gi|298725172|gb|EFI65824.1| flagellar basal body rod protein FlgC [Bacillus cereus SJ1]
 gi|300375450|gb|ADK04354.1| flagellar basal body rod protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 137

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           S   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  SPTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|283834457|ref|ZP_06354198.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
 gi|291070004|gb|EFE08113.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
          Length = 143

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
                 I+ S +  Q+ R+  ++ N+ANA +   +  +  Y+ ++  F  V + S     
Sbjct: 3   FTDIYQISGSAMTAQTIRLNTVASNMANAESPASSE-AQAYKARSPVFAAVYNNSLIGGH 61

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                    V+V+ +       V+ ++P HP+A+ +G V YP+VNV+ + ADM   +R +
Sbjct: 62  NRHAIDGASVQVQDVMQS-GGAVKRYEPHHPMADQNGFVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             ++  +     M  + L L 
Sbjct: 121 ETDVDVLNNVKSMQQSLLKLG 141


>gi|163803167|ref|ZP_02197050.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
 gi|159173067|gb|EDP57900.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
          Length = 144

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 I  S +  Q+ R+  ++ N+ANA      P  D Y+     F  V         
Sbjct: 3   FTDIYSITGSAMTAQTVRLNTVASNLANADAVSANPD-DAYKALKPVFATVYQKTQMTTD 61

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                +  VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R + 
Sbjct: 62  NGVYPNAEVRIVDVVQSAGQAEQRFEPNNPLANNQGYVYYPDIDVVSEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N++ +     M    L L +
Sbjct: 122 TNVEVLTNVKSMQQGLLRLGQ 142


>gi|196033444|ref|ZP_03100856.1| flagellar basal-body rod protein FlgC [Bacillus cereus W]
 gi|195993878|gb|EDX57834.1| flagellar basal-body rod protein FlgC [Bacillus cereus W]
          Length = 137

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADIYERRSVVLESNNSFANMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           S   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  SPTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|91224201|ref|ZP_01259464.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
 gi|91191112|gb|EAS77378.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
          Length = 144

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 I  S +  Q+ R+  ++ N+ANA      P  D Y+     F  V         
Sbjct: 3   FTDIYSITGSAMTAQTVRLNTVASNLANADAVSANP-EDAYKALKPVFATVYQKTQMTTE 61

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                +  VR+  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R + 
Sbjct: 62  NGAYPNAEVRIVDVVKNAGDAEKRFEPNNPLANDEGYVFYPDIDVVAEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N++ +     M    L L +
Sbjct: 122 TNVEVLANVKSMQQGLLRLGQ 142


>gi|300936123|ref|ZP_07151062.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
 gi|300458701|gb|EFK22194.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
          Length = 143

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
                 I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S     
Sbjct: 3   FTDIYQISGSAMTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHHSLLVGT 61

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                    V+V+ +       V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 62  HRHAIDGASVQVQDVLQ-TGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|323975932|gb|EGB71026.1| flagellar basal-body rod protein FlgC [Escherichia coli TW10509]
          Length = 143

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
                 I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S     
Sbjct: 3   FTDIYQISGSAMTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHHSLLAGT 61

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                    V+V+ +          ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 62  HRHAIDGASVQVQDVLQTGGALK-RYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|58582193|ref|YP_201209.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|58426787|gb|AAW75824.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 127

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GGVRVKKI 66
           A S L  QS R+  I+ N+ANA +   +  +  Y+     F+            V VK+I
Sbjct: 2   AGSALHAQSVRLSTIASNLANADSVAGSAEAT-YKPIEPIFQAQQSRQDPSLTSVNVKEI 60

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
               +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ +  + ++  
Sbjct: 61  TTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELAL 120

Query: 127 TTLDLLR 133
            TL + R
Sbjct: 121 ATLTMGR 127


>gi|225569965|ref|ZP_03778990.1| hypothetical protein CLOHYLEM_06060 [Clostridium hylemonae DSM
           15053]
 gi|225161435|gb|EEG74054.1| hypothetical protein CLOHYLEM_06060 [Clostridium hylemonae DSM
           15053]
          Length = 134

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 17/135 (12%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS-------FEEVMHGS--------- 58
           +  Q  R+ I SENIAN  TT  T    PYRRK +        F  V+  +         
Sbjct: 1   MTAQRLRLDIASENIANIETTR-TEDGTPYRRKMVVLESRKENFRSVLGRAMSGQNSANR 59

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGV    I  D +      DP HP A+ +G V+ PNV+++ ET D     R Y AN+   
Sbjct: 60  GGVAAAAIIDDDTELKAVLDPEHPDADENGYVRMPNVDMIKETTDAMAATRSYEANITAF 119

Query: 119 KQSHDMMTTTLDLLR 133
                M    +++ +
Sbjct: 120 NAVKLMAQKAMEIGK 134


>gi|306813306|ref|ZP_07447499.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
 gi|305854069|gb|EFM54508.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
          Length = 143

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
                 I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S     
Sbjct: 3   FTDIYQISGSAMTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHHSLLSGT 61

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                    V+V+ +       V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 62  HRHAIDGASVQVQDVLQ-TGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|229172391|ref|ZP_04299950.1| Flagellar basal-body rod protein FlgC [Bacillus cereus MM3]
 gi|228610862|gb|EEK68125.1| Flagellar basal-body rod protein FlgC [Bacillus cereus MM3]
          Length = 137

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLEG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           S   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  SPTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|126734103|ref|ZP_01749850.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2]
 gi|126716969|gb|EBA13833.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2]
          Length = 130

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HG 57
           M     +  +A SG+  Q++R++ +SENIAN  T G       YRRK I+FEE++     
Sbjct: 1   MTDFSDAISVATSGMKAQASRLRHVSENIANTDTPG-------YRRKAITFEELVTQGRT 53

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +G V    + +DQ+     +DP HP+A+ +G     NVN+L+E AD RE  R Y ANL+ 
Sbjct: 54  TGAVETGPLRLDQTELKRVYDPSHPLADDTGHYNGSNVNLLIEIADAREAQRSYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
             Q   M +   DLLR
Sbjct: 114 FDQVRQMSSALNDLLR 129


>gi|32474824|ref|NP_867818.1| flagellar basal-body rod potein FlgC [Rhodopirellula baltica SH 1]
 gi|32445364|emb|CAD75365.1| flagellar basal-body rod potein FlgC [Rhodopirellula baltica SH 1]
 gi|327539962|gb|EGF26561.1| flagellar basal-body rod protein FlgC [Rhodopirellula baltica WH47]
          Length = 143

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 9/138 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFE----EVMHGS 58
           +I++  I+ S L  Q  R+  IS NIAN  +  D  G+  PY+ + + F+         +
Sbjct: 5   MISALDISTSALVAQRTRLNAISGNIANISSLVDENGNPSPYQARQVVFQTDETASPGEA 64

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETADMRETNRLYMAN 114
            GV+V ++ +D+S  +  + P HP+A       G V YPN+++  +  D  E+ R Y AN
Sbjct: 65  AGVKVSEVMLDESEPLYRYQPDHPLAINEGKWEGYVAYPNIDLTTQMVDALESTRAYEAN 124

Query: 115 LQTIKQSHDMMTTTLDLL 132
           +  I+ S  M    L +L
Sbjct: 125 VGVIEISKGMSRQRLAIL 142


>gi|170737036|ref|YP_001778296.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
 gi|169819224|gb|ACA93806.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
          Length = 132

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-VR 62
               + IA S L+ Q+ R+  I+ N+ANA T+G       YR +   F  V    G  V+
Sbjct: 3   FKDISQIAGSALSAQTVRLNTIASNLANAGTSGTEE--TAYRARKPVFASVFQNGGARVQ 60

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V  +           +PGHP+A+ +G+V Y NV+ + E ADM   +R +  N++ + +  
Sbjct: 61  VLDVIATDDALAARHEPGHPLADENGMVFYSNVSAVEEMADMMAASRAFSTNVEVLTRIK 120

Query: 123 DMMTTTLDLL 132
            M    L + 
Sbjct: 121 GMQQDLLRMG 130


>gi|327254552|gb|EGE66168.1| flagellar basal-body rod protein FlgC [Escherichia coli STEC_7v]
          Length = 143

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
                 I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S     
Sbjct: 3   FTDIYQISGSAMTAQTLRLNTVASNLANANAPAGSE-AQAYKARSPVFAAVYHHSLLAGT 61

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                    V+V+ +       V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 62  HRHAIDGASVQVQDVLQ-TGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|170021362|ref|YP_001726316.1| flagellar basal body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|170683008|ref|YP_001742371.1| flagellar basal body rod protein FlgC [Escherichia coli SMS-3-5]
 gi|188492955|ref|ZP_03000225.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|260853464|ref|YP_003227355.1| putative lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|260866411|ref|YP_003232813.1| putative lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|331645416|ref|ZP_08346520.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331666544|ref|ZP_08367418.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331671802|ref|ZP_08372598.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
 gi|169756290|gb|ACA78989.1| flagellar basal-body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|170520726|gb|ACB18904.1| lateral flagellar basal-body rod protein LfgC [Escherichia coli
           SMS-3-5]
 gi|188488154|gb|EDU63257.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|257752113|dbj|BAI23615.1| predicted lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|257762767|dbj|BAI34262.1| predicted lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|323158105|gb|EFZ44204.1| flagellar basal-body rod protein FlgC [Escherichia coli EPECa14]
 gi|323171061|gb|EFZ56710.1| flagellar basal-body rod protein FlgC [Escherichia coli LT-68]
 gi|323181545|gb|EFZ66965.1| flagellar basal-body rod protein FlgC [Escherichia coli 1357]
 gi|331045578|gb|EGI17704.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331065768|gb|EGI37652.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331070791|gb|EGI42150.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
          Length = 143

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
                 I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S     
Sbjct: 3   FTDIYQISGSAMTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHHSLLAGT 61

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                    V+V+ +       V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 62  HRHAIDGASVQVQDVLQ-TGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|254485520|ref|ZP_05098725.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101]
 gi|214042389|gb|EEB83027.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101]
          Length = 130

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HG 57
           M     +  +++SGL  Q+ R++ +SENI+NA T G       YRRK +SF+        
Sbjct: 1   MSDFSNALDVSSSGLRAQANRLRHLSENISNADTPG-------YRRKLVSFQTAFSLGDA 53

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+  K+ +DQ+   + +DP HP+A+ +G     NVN+L+E AD +E  R Y ANL+ 
Sbjct: 54  PAKVQTGKVHLDQTALEKVYDPAHPLADDTGQYDGSNVNLLIELADAKEAQRSYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
            +Q+  M +  +DLLR
Sbjct: 114 FEQTRKMSSGLMDLLR 129


>gi|228938858|ref|ZP_04101458.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971739|ref|ZP_04132360.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978348|ref|ZP_04138725.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           Bt407]
 gi|228781365|gb|EEM29566.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           Bt407]
 gi|228787829|gb|EEM35787.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228820707|gb|EEM66732.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326939358|gb|AEA15254.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 137

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++  T ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVTQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|167614835|ref|ZP_02383470.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           Bt4]
          Length = 125

 Score =  147 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 8/126 (6%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------GSGGVRVKKIG 67
           ++ Q+ R+  I+ N+ANA        S  YR +   F  +             V+V  + 
Sbjct: 1   MSAQTVRLNTIASNLANADAASGAEDST-YRARKPVFASIFQLDAQGEPRGAAVQVLDVV 59

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                  +   PGHP+A+A G V YPNVN + E  DM   +R Y  N++ + + + M   
Sbjct: 60  KSTEPLRKVHQPGHPLADAEGNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNSMQLE 119

Query: 128 TLDLLR 133
            L L +
Sbjct: 120 LLKLGQ 125


>gi|256020226|ref|ZP_05434091.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
 gi|300817272|ref|ZP_07097490.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|307313521|ref|ZP_07593142.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|332281388|ref|ZP_08393801.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
 gi|300530248|gb|EFK51310.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|306906689|gb|EFN37200.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|315059540|gb|ADT73867.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli W]
 gi|323379901|gb|ADX52169.1| flagellar basal-body rod protein FlgC [Escherichia coli KO11]
 gi|332103740|gb|EGJ07086.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
          Length = 143

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H       
Sbjct: 3   FTDIYQISGSAMTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHHSLLAGT 61

Query: 57  -----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                 S  V+V+ +       V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 62  HRHAIDSASVQVQDVLQ-TGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|225871925|ref|YP_002753379.1| flagellar basal-body rod protein FlgC [Acidobacterium capsulatum
           ATCC 51196]
 gi|225793067|gb|ACO33157.1| flagellar basal-body rod protein FlgC [Acidobacterium capsulatum
           ATCC 51196]
          Length = 165

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 34/163 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---------- 53
           L+    ++ S L  +  R ++++ N+ANA TT    G  PY RK + F            
Sbjct: 3   LLGLLDVSGSALEAERIRAEVVAANMANANTTRTASGG-PYLRKEVVFSSQAPEPGAFAN 61

Query: 54  -----------------------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
                                       GGVRV  +  D++  ++ +DP HP A+  G V
Sbjct: 62  QFADQFAGGAEAPVSLQAMAGGMAEPQVGGVRVSAVLTDKNAILKRYDPSHPDADKQGYV 121

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            YP +N + E  D+    R Y  N   ++ + +M+ + L++L+
Sbjct: 122 SYPEINPVTEMVDLMSATRSYGLNSSAVQATKNMINSALEILK 164


>gi|218703523|ref|YP_002411042.1| flagellar basal body rod protein FlgC [Escherichia coli UMN026]
 gi|293403353|ref|ZP_06647444.1| flgC [Escherichia coli FVEC1412]
 gi|298378965|ref|ZP_06988846.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|300900363|ref|ZP_07118538.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
 gi|218430620|emb|CAR11486.1| putative Flagellar basal-body rod protein flgC ( proximal rod
           protein) [Escherichia coli UMN026]
 gi|291429206|gb|EFF02226.1| flgC [Escherichia coli FVEC1412]
 gi|298280078|gb|EFI21582.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|300356119|gb|EFJ71989.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
          Length = 143

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
                 I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S     
Sbjct: 3   FTDIYQISGSAMTAQTIRLNTVASNLANANAPAGSE-AQAYKARSPVFAAVYHHSLLAGT 61

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                    V+V+ +       V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 62  HRHAIDGASVQVQDVLQ-TGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|87307389|ref|ZP_01089534.1| flagellar basal-body rod potein FlgC [Blastopirellula marina DSM
           3645]
 gi|87290129|gb|EAQ82018.1| flagellar basal-body rod potein FlgC [Blastopirellula marina DSM
           3645]
          Length = 140

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 10/139 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEE-----VMHG 57
           +  +  I++S +  Q  R+  ++ NIAN  +  D  G   PYR + + F+         G
Sbjct: 1   MNGALDISSSAMVAQRIRLNAVTSNIANMSSLRDESGDIAPYRARHVIFQTDNAIRAQGG 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETADMRETNRLYMA 113
           + GV+V  I  +Q   +  + P HP+A   G     V +P VN++ +  D  E +R Y A
Sbjct: 61  AAGVKVSSIEEEQVEPIYRYQPTHPLAITEGKYKGYVAHPRVNMVEQMVDALEASRAYEA 120

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N+  ++ S ++   +L +L
Sbjct: 121 NIGVVEISKNLAAQSLRIL 139


>gi|42780837|ref|NP_978084.1| flagellar basal body rod protein FlgC [Bacillus cereus ATCC 10987]
 gi|222095368|ref|YP_002529428.1| flagellar basal body rod protein flgc [Bacillus cereus Q1]
 gi|229195957|ref|ZP_04322710.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1293]
 gi|42736757|gb|AAS40692.1| flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10987]
 gi|221239426|gb|ACM12136.1| flagellar basal-body rod protein FlgC [Bacillus cereus Q1]
 gi|228587516|gb|EEK45581.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1293]
          Length = 137

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++  
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDS 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     +DP HP AN  G V+YPNV+V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNVDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|289679031|ref|ZP_06499921.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           syringae FF5]
          Length = 124

 Score =  146 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 40/123 (32%), Positives = 54/123 (43%), Gaps = 16/123 (13%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---------------GVRVKKIGVDQ 70
           + NIANA T   +     YR +   F  VM G                 GV+V  I  D 
Sbjct: 3   ASNIANAETVSSSMD-QTYRARHPVFATVMQGQQSTGGSLFQDQGEAGQGVQVNGIIEDS 61

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           S     ++P HP A+  G V YPNVNV+ E ADM   +R +  N + +  +  MM   L 
Sbjct: 62  SNLEARYEPNHPSADKDGYVYYPNVNVVEEMADMISASRSFQTNAEIMNTAKSMMQKVLT 121

Query: 131 LLR 133
           L +
Sbjct: 122 LGQ 124


>gi|229029424|ref|ZP_04185507.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1271]
 gi|228731883|gb|EEL82782.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1271]
          Length = 137

 Score =  146 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++  
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDA 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     +DP HP AN  G V+YPNV+V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNVDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|323191536|gb|EFZ76797.1| flagellar basal-body rod protein FlgC [Escherichia coli RN587/1]
          Length = 143

 Score =  146 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
                 I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S     
Sbjct: 3   FTDIYQISGSAMTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHNSLLAGT 61

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                    V+V+ +       V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 62  HRHAIDGASVQVQDVLQ-TGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|195952550|ref|YP_002120840.1| flagellar basal-body rod protein FlgC [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932162|gb|ACG56862.1| flagellar basal-body rod protein FlgC [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 136

 Score =  146 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 9/136 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
           M  +  +  ++ SG+  +  RM  I+ N+AN  +        PY++    F+ V      
Sbjct: 1   MLDIFNAFDVSASGMYAERIRMNTIASNLANYESYKT--DGTPYQKLEPVFQAVYDRNML 58

Query: 57  --GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
             G   V V +I      F   +DP +P AN  G V+ PN+NV  E  DM    + Y AN
Sbjct: 59  SDGLVPVNVSEIRQSNG-FKLIYDPSNPHANTQGYVEEPNINVTTEMVDMITATQSYQAN 117

Query: 115 LQTIKQSHDMMTTTLD 130
           L     + ++   T++
Sbjct: 118 LSAFNMTKNIAQFTIN 133


>gi|293408365|ref|ZP_06652204.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
 gi|291471543|gb|EFF14026.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
          Length = 143

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
                 I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S     
Sbjct: 3   FTDIYQISGSAMTAQTLRLNTVASNLANAEAPAGSE-AQAYKARSPVFAAVYHHSLLAGT 61

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                    V+V+ +       V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 62  HRHAMDGASVQVQDVLQ-TGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|301646811|ref|ZP_07246663.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|307136856|ref|ZP_07496212.1| flagellar basal body rod protein FlgC [Escherichia coli H736]
 gi|331640711|ref|ZP_08341858.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
 gi|301075004|gb|EFK89810.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|315616829|gb|EFU97446.1| flagellar basal-body rod protein FlgC [Escherichia coli 3431]
 gi|331040085|gb|EGI12293.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
          Length = 143

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 I+ S +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H       
Sbjct: 3   FTDIYQISGSAMTAQTIRLNTVASNLANAEAPAGSE-AQAYKARSPVFAAVYHHSLLAGT 61

Query: 57  -----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                 +  V+V+ +       V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 62  HRHAIDAASVQVQDVLQ-TGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|167639076|ref|ZP_02397349.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0193]
 gi|177650375|ref|ZP_02933342.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0174]
 gi|254734585|ref|ZP_05192297.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Western North America USA6153]
 gi|167512866|gb|EDR88239.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0193]
 gi|172083519|gb|EDT68579.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0174]
          Length = 137

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++  
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDR 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           S   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  SPTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|315281376|ref|ZP_07870013.1| flagellar basal-body rod protein FlgC [Listeria marthii FSL S4-120]
 gi|313614973|gb|EFR88480.1| flagellar basal-body rod protein FlgC [Listeria marthii FSL S4-120]
          Length = 136

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA +    PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADS-SAAPGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ R
Sbjct: 120 LQANEKMMEKDLEIGR 135


>gi|308050026|ref|YP_003913592.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
 gi|307632216|gb|ADN76518.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
          Length = 138

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 7/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
            +    IA S + VQS R+  ++ N+ANA        S  YR     F+ +     G   
Sbjct: 3   FVDIYQIAGSAMNVQSIRLNTVASNLANAEAAAPDEAS-AYRAIKPVFQTLYEQGNGGGV 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V++  +    +     ++P HP+AN  G V Y NVN + E ADM    R +  ++  
Sbjct: 62  SANVQIAGVVQSDAPLESRYEPDHPMANEQGYVTYSNVNTVQEMADMMAATRAFETSVDI 121

Query: 118 IKQSHDMMTTTLDLL 132
           + ++  M    L L 
Sbjct: 122 MSRARSMQQGLLKLG 136


>gi|258622486|ref|ZP_05717508.1| Flagellar basal-body rod protein C [Vibrio mimicus VM573]
 gi|262173352|ref|ZP_06041029.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
 gi|258585186|gb|EEW09913.1| Flagellar basal-body rod protein C [Vibrio mimicus VM573]
 gi|261890710|gb|EEY36697.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
          Length = 144

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 12/140 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 IA S +  Q+ R+  ++ N+ANA         D Y+     F  V +       
Sbjct: 3   FTDIYSIAGSAMTAQTVRLNTVASNLANADAVSANSD-DAYKALKPVFATVYNKTQMAAS 61

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                S  VRV  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R + 
Sbjct: 62  DSAYPSAEVRVMDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVVAEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
            N++ +     M    L L 
Sbjct: 122 TNVEVLSNVKSMQQGLLKLG 141


>gi|153949008|ref|YP_001399632.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
 gi|152960503|gb|ABS47964.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
          Length = 141

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 12/134 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----------S 58
            +A S +  Q+ R+  I+ N+ANA +   +  +  Y+ ++  F  V             S
Sbjct: 8   RVAGSAMTAQTIRLNTIASNLANAESPAAS-AATVYKARSPVFSAVYSARAETEPQGIQS 66

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+V  +       V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  N++ +
Sbjct: 67  AQVQVLDVVE-VGGSVQRYEPNHPMANPQGYVFYPAVNVVSEMADMMSASRSFETNVEVL 125

Query: 119 KQSHDMMTTTLDLL 132
                M  + L L 
Sbjct: 126 NSVKSMQQSVLKLG 139


>gi|196044999|ref|ZP_03112232.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB108]
 gi|225863603|ref|YP_002748981.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB102]
 gi|229183936|ref|ZP_04311152.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BGSC 6E1]
 gi|196024001|gb|EDX62675.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB108]
 gi|225788684|gb|ACO28901.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB102]
 gi|228599588|gb|EEK57192.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BGSC 6E1]
 gi|324325762|gb|ADY21022.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 137

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG++ Y R+++       F  ++  
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGANLYERRSVVLESNNSFANMLDS 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     +DP HP AN  G V+YPNV+V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNVDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|332162903|ref|YP_004299480.1| flagellar basal-body rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604250|emb|CBY25748.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325667133|gb|ADZ43777.1| Flagellar basal-body rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863353|emb|CBX73476.1| flagellar basal-body rod protein flgC [Yersinia enterocolitica
           W22703]
          Length = 141

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 10/136 (7%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--------G 57
               ++ S +  Q+ R+  I+ N+ANA +   +  +  Y+ ++  F  V          G
Sbjct: 5   NIYRVSGSAMTAQTIRLNAIASNLANAESPAAS-AATVYKARSPVFSAVYSPRSATNPGG 63

Query: 58  SGGVRVKKI-GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             G +V+ +  V+    V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  N++
Sbjct: 64  VNGAQVQVLDVVETGGSVQRYEPNHPLANPQGYVFYPAVNVVSEMADMMSASRSFETNVE 123

Query: 117 TIKQSHDMMTTTLDLL 132
            +     M  + L L 
Sbjct: 124 VLNSVKSMQQSVLRLG 139


>gi|254443396|ref|ZP_05056872.1| flagellar basal-body rod protein FlgC [Verrucomicrobiae bacterium
           DG1235]
 gi|198257704|gb|EDY82012.1| flagellar basal-body rod protein FlgC [Verrucomicrobiae bacterium
           DG1235]
          Length = 123

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 12/123 (9%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEV-----------MHGSGGVRVKKIGVDQ 70
           M II +NIANA TT   P   PY+R+T+ FE             M  + GV V+ +  D+
Sbjct: 1   MDIIGQNIANAHTTRG-PDGMPYQRQTVQFEAKLMELGRDQNGKMQTAQGVNVRDVVTDE 59

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +     F+PGHP A+  G+V+ PNVN+  E  D+   +R Y ANLQ ++ S  M    L 
Sbjct: 60  TNGPLVFNPGHPDADEKGMVQLPNVNLTHEMVDLISASRSYEANLQVVRTSKQMAQQALR 119

Query: 131 LLR 133
           + +
Sbjct: 120 IGQ 122


>gi|16799794|ref|NP_470062.1| flagellar basal body rod protein FlgC [Listeria innocua Clip11262]
 gi|16802753|ref|NP_464238.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           EGD-e]
 gi|46906962|ref|YP_013351.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47091674|ref|ZP_00229470.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           4b H7858]
 gi|47095277|ref|ZP_00232888.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           1/2a F6854]
 gi|217965191|ref|YP_002350869.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HCC23]
 gi|224498793|ref|ZP_03667142.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           Finland 1988]
 gi|224501984|ref|ZP_03670291.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           R2-561]
 gi|226223342|ref|YP_002757449.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           Clip81459]
 gi|254824009|ref|ZP_05229010.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J1-194]
 gi|254829368|ref|ZP_05234055.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N3-165]
 gi|254830298|ref|ZP_05234953.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           10403S]
 gi|254900053|ref|ZP_05259977.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           J0161]
 gi|254911394|ref|ZP_05261406.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           J2818]
 gi|254932009|ref|ZP_05265368.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HPB2262]
 gi|254935721|ref|ZP_05267418.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           F6900]
 gi|255022492|ref|ZP_05294478.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J1-208]
 gi|255025679|ref|ZP_05297665.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J2-003]
 gi|284801041|ref|YP_003412906.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5578]
 gi|284994183|ref|YP_003415951.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5923]
 gi|290894009|ref|ZP_06556984.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J2-071]
 gi|16410100|emb|CAC98789.1| lmo0711 [Listeria monocytogenes EGD-e]
 gi|16413171|emb|CAC95951.1| lin0719 [Listeria innocua Clip11262]
 gi|46880228|gb|AAT03528.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47016348|gb|EAL07270.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           1/2a F6854]
 gi|47019993|gb|EAL10730.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           4b H7858]
 gi|217334461|gb|ACK40255.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HCC23]
 gi|225875804|emb|CAS04507.1| Putative flagellar basal-body rod protein FlgC [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258601782|gb|EEW15107.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N3-165]
 gi|258608305|gb|EEW20913.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           F6900]
 gi|284056603|gb|ADB67544.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5578]
 gi|284059650|gb|ADB70589.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5923]
 gi|290556455|gb|EFD89994.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J2-071]
 gi|293583560|gb|EFF95592.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HPB2262]
 gi|293589332|gb|EFF97666.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           J2818]
 gi|293593236|gb|EFG00997.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J1-194]
 gi|307570250|emb|CAR83429.1| flagellar basal-body rod protein [Listeria monocytogenes L99]
 gi|313610106|gb|EFR85431.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           F2-208]
 gi|328467276|gb|EGF38356.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 1816]
 gi|328475672|gb|EGF46421.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 220]
 gi|332311135|gb|EGJ24230.1| Flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           Scott A]
          Length = 136

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA +    PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADS-SAAPGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ +
Sbjct: 120 LQANEKMMEKDLEIGK 135


>gi|30019789|ref|NP_831420.1| flagellar basal body rod protein FlgC [Bacillus cereus ATCC 14579]
 gi|29895334|gb|AAP08621.1| Flagellar basal-body rod protein flgC [Bacillus cereus ATCC 14579]
          Length = 137

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      MQ+ S NI NA T    PG+D Y R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMQVTSNNIVNANTPA-APGADLYERRSVVLESNNSFASMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|218778520|ref|YP_002429838.1| flagellar basal-body rod protein FlgC [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759904|gb|ACL02370.1| Flagellar basal-body rod protein FlgC [Desulfatibacillum
           alkenivorans AK-01]
          Length = 142

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 13/144 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           MD L+ + H + S L+V  A+M ++SEN+ANA TT    G  PY+RK +           
Sbjct: 1   MD-LLNAMHASASALSVSRAQMNVVSENLANANTTRTANG-QPYQRKFLVVSPAPVKEHE 58

Query: 56  ------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV++  I  DQS F   + P HP A+ +G ++ PNVNV+ E A+M    R
Sbjct: 59  NLSVGEQVVEGVKLVDIVADQSPFPMVYRPEHPDADENGNLQLPNVNVVTEMANMLMAKR 118

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
           +Y +N   +  +  M    L++ +
Sbjct: 119 VYDSNAAALSTARSMALKALEIGK 142


>gi|56695104|ref|YP_165451.1| flagellar basal body rod protein FlgC [Ruegeria pomeroyi DSS-3]
 gi|56676841|gb|AAV93507.1| flagellar basal-body rod protein FlgC [Ruegeria pomeroyi DSS-3]
          Length = 135

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  +  S L  Q+ R++ +SENI+NA T G       YRRKT+ FE       G
Sbjct: 6   MSEFSKSLSVTASALRAQATRLRHVSENISNADTPG-------YRRKTVPFEVERGRDDG 58

Query: 61  V-RVK--KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V RV   ++ +D+    + FDP HP+A+ +G  +  NV++++E AD RE  R Y ANL+ 
Sbjct: 59  VERVTTGRVKLDRRQLPDIFDPSHPLADETGHYQGSNVDLMIEIADAREAQRSYEANLKL 118

Query: 118 IKQSHDMMTTTLDLLR 133
             Q+  M  + ++LLR
Sbjct: 119 FDQARQMSASLMELLR 134


>gi|312884836|ref|ZP_07744528.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367488|gb|EFP95048.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 145

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 12/141 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 IA S +  QS R+  ++ N+ANA         D Y+     F  V +       
Sbjct: 3   FTDIYSIAGSAMNAQSVRLNTVASNLANADAVSANAD-DAYKALKPVFATVYNKTQLSVS 61

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                +  VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R + 
Sbjct: 62  DNAYPNAEVRIVDVVQSSKQAEKRFEPSNPLANDEGYVYYPDIDVVAEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N+  +     M    L L +
Sbjct: 122 TNVAVLGNVKSMQQGLLKLGQ 142


>gi|126738582|ref|ZP_01754287.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6]
 gi|126720381|gb|EBA17087.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6]
          Length = 130

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHG 57
           M     S ++  SGL  Q+ R++ +SENI+NA T G       YRRKT+ F    E+ + 
Sbjct: 1   MSEFANSLNVTASGLKAQAKRLRHVSENISNADTPG-------YRRKTVPFLAVRELQND 53

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +  V   ++ +D++     +DP HP+A+ +G  +  NV++++E AD RE  R Y ANL+ 
Sbjct: 54  AEKVETGRVTLDRTELTNIYDPTHPMADDTGHYEGSNVDLMIEIADAREAQRSYDANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
            +Q+  M  + +DLLR
Sbjct: 114 FEQTRSMSASLMDLLR 129


>gi|229160708|ref|ZP_04288700.1| Flagellar basal-body rod protein FlgC [Bacillus cereus R309803]
 gi|228622723|gb|EEK79557.1| Flagellar basal-body rod protein FlgC [Bacillus cereus R309803]
          Length = 137

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT + PG+D Y R+++       F  +++ 
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTAE-PGADLYERRSVVLESNNSFANMLNS 59

Query: 58  --SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             + GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  TPANGVKIKSIEADKAE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMIAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|116872100|ref|YP_848881.1| flagellar basal body rod protein FlgC [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116740978|emb|CAK20098.1| flagellar basal-body rod protein FlgC [Listeria welshimeri serovar
           6b str. SLCC5334]
          Length = 136

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA +    PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADS-SAAPGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISADTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ +
Sbjct: 120 LQANEKMMEKDLEIGK 135


>gi|254853085|ref|ZP_05242433.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           R2-503]
 gi|255521221|ref|ZP_05388458.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J1-175]
 gi|300764524|ref|ZP_07074517.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N1-017]
 gi|258606433|gb|EEW19041.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           R2-503]
 gi|300514878|gb|EFK41932.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N1-017]
          Length = 136

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA +    PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADS-SAAPGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D       +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISSDTGNVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ +
Sbjct: 120 LQANEKMMEKDLEIGK 135


>gi|313624695|gb|EFR94652.1| flagellar basal-body rod protein FlgC [Listeria innocua FSL J1-023]
          Length = 136

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA +    PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADS-SAAPGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TXGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ +
Sbjct: 120 LQANEKMMEKDLEIGK 135


>gi|258625236|ref|ZP_05720148.1| Flagellar basal-body rod protein C [Vibrio mimicus VM603]
 gi|258582483|gb|EEW07320.1| Flagellar basal-body rod protein C [Vibrio mimicus VM603]
          Length = 144

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 12/140 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 IA S +  Q+ R+  ++ N+ANA         D Y+     F  V +       
Sbjct: 3   FTDIYSIAGSAMTAQTVRLNTVASNLANADAVSANSD-DAYKALKPVFATVYNKTQMAAS 61

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                S  VRV  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R + 
Sbjct: 62  DSAYPSAEVRVMDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVVAEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
            N++ +     M    L L 
Sbjct: 122 TNVEMLSNVKSMQQGLLKLG 141


>gi|91202525|emb|CAJ72164.1| strongly similar to flagellar basal-body rod protein FlgC
           [Candidatus Kuenenia stuttgartiensis]
          Length = 147

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 13/140 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------ 58
            ++  I+ +GL  +  RM +I+ NIANA  T ++P   PYRR+ + F+ +++ +      
Sbjct: 7   FSALDISATGLTAERIRMNVIANNIANANAT-NSPDGGPYRREQVEFQSILNKAANLSDI 65

Query: 59  ------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                 GGV+V  I   +  F + F PGHP A+ +G V+ PNVN+  E  D+   +R Y 
Sbjct: 66  DGMERLGGVKVSNIMKSKEPFNKVFIPGHPQADENGFVEMPNVNIATEMVDLVTASRSYE 125

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           ANL  I  S D+    L ++
Sbjct: 126 ANLAVINSSKDITNQALSII 145


>gi|332669188|ref|YP_004452196.1| flagellar basal-body rod protein FlgC [Cellulomonas fimi ATCC 484]
 gi|332338226|gb|AEE44809.1| flagellar basal-body rod protein FlgC [Cellulomonas fimi ATCC 484]
          Length = 132

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 63/130 (48%), Gaps = 1/130 (0%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  IA++GL V    +  +S+N++N  T   T   + +R K +   E    + GV+V
Sbjct: 3   IFGAIGIASTGLTVHRKWLDAVSDNLSNLSTVRPTS-EEAFRAKYVVAAESAGENQGVQV 61

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             I    +     ++PGHP+A+  G V+YP++++  +   +    R Y AN   + ++ +
Sbjct: 62  AGIVEGSAEGRLVYEPGHPLADEDGYVRYPDIDMSSQMTQLMMAQRGYQANAAVVDRARE 121

Query: 124 MMTTTLDLLR 133
                L + R
Sbjct: 122 TYNAALQIGR 131


>gi|254993619|ref|ZP_05275809.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J2-064]
          Length = 136

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA +    PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADS-SAAPGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVXQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ +
Sbjct: 120 LQANEKMMEKDLEIGK 135


>gi|22127330|ref|NP_670753.1| flagellar basal body rod protein FlgC [Yersinia pestis KIM 10]
 gi|45442794|ref|NP_994333.1| flagellar basal body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51597639|ref|YP_071830.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 32953]
 gi|108809057|ref|YP_652973.1| flagellar basal body rod protein FlgC [Yersinia pestis Antiqua]
 gi|108810746|ref|YP_646513.1| flagellar basal body rod protein FlgC [Yersinia pestis Nepal516]
 gi|145597815|ref|YP_001161891.1| flagellar basal body rod protein FlgC [Yersinia pestis Pestoides F]
 gi|150260251|ref|ZP_01916979.1| lateral flagellar rod protein [Yersinia pestis CA88-4125]
 gi|162418952|ref|YP_001604849.1| flagellar basal body rod protein FlgC [Yersinia pestis Angola]
 gi|165924966|ref|ZP_02220798.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939065|ref|ZP_02227617.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008997|ref|ZP_02229895.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212219|ref|ZP_02238254.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167398642|ref|ZP_02304166.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167418994|ref|ZP_02310747.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425145|ref|ZP_02316898.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167466343|ref|ZP_02331047.1| flagellar basal-body rod protein FlgC [Yersinia pestis FV-1]
 gi|170022969|ref|YP_001719474.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186896773|ref|YP_001873885.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|218927910|ref|YP_002345785.1| flagellar basal body rod protein FlgC [Yersinia pestis CO92]
 gi|229837406|ref|ZP_04457569.1| Flagellar basal-body rod protein flgC [Yersinia pestis Pestoides A]
 gi|229840619|ref|ZP_04460778.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842830|ref|ZP_04462982.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900943|ref|ZP_04516067.1| Flagellar basal-body rod protein flgC [Yersinia pestis Nepal516]
 gi|270487675|ref|ZP_06204749.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294502786|ref|YP_003566848.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|21960411|gb|AAM87004.1|AE013948_12 flagellar biosynthesis protein, cell-proximal portion of basal-body
           rod [Yersinia pestis KIM 10]
 gi|45437660|gb|AAS63210.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51590921|emb|CAH22577.1| Putative flagellar basal-body rod protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774394|gb|ABG16913.1| flagellar basal-body rod protein [Yersinia pestis Nepal516]
 gi|108780970|gb|ABG15028.1| putative flagellar basal-body rod protein [Yersinia pestis Antiqua]
 gi|115346521|emb|CAL19397.1| putative flagellar basal-body rod protein [Yersinia pestis CO92]
 gi|145209511|gb|ABP38918.1| flagellar basal-body rod protein [Yersinia pestis Pestoides F]
 gi|149289659|gb|EDM39736.1| lateral flagellar rod protein [Yersinia pestis CA88-4125]
 gi|162351767|gb|ABX85715.1| flagellar basal-body rod protein FlgC [Yersinia pestis Angola]
 gi|165913021|gb|EDR31646.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923166|gb|EDR40317.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992336|gb|EDR44637.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206965|gb|EDR51445.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962988|gb|EDR59009.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051146|gb|EDR62554.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055908|gb|EDR65689.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169749503|gb|ACA67021.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186699799|gb|ACC90428.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|229682282|gb|EEO78374.1| Flagellar basal-body rod protein flgC [Yersinia pestis Nepal516]
 gi|229690097|gb|EEO82154.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696985|gb|EEO87032.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705529|gb|EEO91539.1| Flagellar basal-body rod protein flgC [Yersinia pestis Pestoides A]
 gi|262360818|gb|ACY57539.1| flagellar basal body rod protein [Yersinia pestis D106004]
 gi|270336179|gb|EFA46956.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294353245|gb|ADE63586.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|320016713|gb|ADW00285.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 141

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 12/134 (8%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----------S 58
            +A S +  Q+ R+  I+ N+ANA +   +  +  Y+ ++  F  V             S
Sbjct: 8   RVAGSAMTAQTIRLNTIASNLANAESPAAS-AATVYKARSPVFSAVYSARTAADPRGVQS 66

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+V  +       V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  N++ +
Sbjct: 67  AQVQVLDVVE-VGGSVQRYEPNHPMANPQGYVFYPAVNVVSEMADMMSASRSFETNVEVL 125

Query: 119 KQSHDMMTTTLDLL 132
                M  + L L 
Sbjct: 126 NSVKSMQQSVLKLG 139


>gi|83646783|ref|YP_435218.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
           2396]
 gi|83634826|gb|ABC30793.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
           2396]
          Length = 133

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 4/134 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           MDYL     I+ SGL  Q  R+Q ++ N+AN  +T    G+  ++           G   
Sbjct: 1   MDYL-QVFDISGSGLDFQKLRLQAVATNLANVYSTSSKAGA-AFKPLMAVATAEQSGGSL 58

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV   ++         ++DP HP ANA G V+ P +N + E   M    R Y AN+  +
Sbjct: 59  RGVGDMQLVERDVEPRLKYDPAHPHANADGYVEMPAINPVDEMTSMMLATRAYEANVSVL 118

Query: 119 KQSHDMMTTTLDLL 132
             +  M    L++ 
Sbjct: 119 SAAKTMALKALEIG 132


>gi|56551509|ref|YP_162348.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|260752884|ref|YP_003225777.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|4378860|gb|AAD19728.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|56543083|gb|AAV89237.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258552247|gb|ACV75193.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 134

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 3/135 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           MD  ++   I+   ++ Q  R+   + N+ANA +   +  +  +      F  V    G 
Sbjct: 1   MDRPLSIFDISGRAMSAQLVRLNTNASNLANANSVASSKEA-AFHPLKPIFSTVTQSPGI 59

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+V K+    S   +  DP HP+A+ +G V    V+   E  +M ET R Y  N+Q +
Sbjct: 60  ATVKVDKVVATGSPPTQIHDPTHPLADENGDVWAAGVDTAQEMVEMIETARDYQNNVQVM 119

Query: 119 KQSHDMMTTTLDLLR 133
           + +  +   TL + R
Sbjct: 120 QTAKSLTLDTLKMER 134


>gi|289433989|ref|YP_003463861.1| flagellar basal-body rod protein FlgC [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|315301963|ref|ZP_07872959.1| flagellar basal-body rod protein FlgC [Listeria ivanovii FSL
           F6-596]
 gi|289170233|emb|CBH26773.1| flagellar basal-body rod protein FlgC [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|313629670|gb|EFR97807.1| flagellar basal-body rod protein FlgC [Listeria ivanovii FSL
           F6-596]
 gi|313639044|gb|EFS04033.1| flagellar basal-body rod protein FlgC [Listeria seeligeri FSL
           S4-171]
          Length = 136

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA +    PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADS-SAAPGETPFLRKRVVMSEISPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ +
Sbjct: 120 LQANEKMMEKDLEIGK 135


>gi|283782090|ref|YP_003372845.1| flagellar basal-body rod protein FlgC [Pirellula staleyi DSM 6068]
 gi|283440543|gb|ADB18985.1| flagellar basal-body rod protein FlgC [Pirellula staleyi DSM 6068]
          Length = 141

 Score =  143 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 11/140 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD--PYRRKTISFEE-----VMH 56
           +  +  I+ S L  Q  R+  IS N+AN  +       +  PY  K + FE        H
Sbjct: 1   MHTALDISTSALVAQRIRLDTISSNLANMTSLERDASGEMKPYEGKYVRFEADPELATRH 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETADMRETNRLYM 112
           G+ GV+V  I  +    +  + P HP A       G V YP +N   E  D     R Y 
Sbjct: 61  GAVGVKVSSIETETVEPLYRWQPDHPYAIKEGPRKGYVAYPRINQTAEFVDALVATRAYE 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN+  ++ + +M   TL +L
Sbjct: 121 ANVGVMEITKNMSQQTLRIL 140


>gi|241761153|ref|ZP_04759242.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241374772|gb|EER64233.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 134

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 3/135 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           MD  ++   I+   ++ Q  R+   + N+ANA +   +  +  +      F  V    G 
Sbjct: 1   MDRPLSIFDISGRAMSAQLVRLNTNASNLANANSVASSKEA-AFHPLKPIFSTVTQSPGI 59

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+V K+    S   +  DP HP+A+ +G V    V+   E  +M ET R Y  N+Q +
Sbjct: 60  ATVKVNKVVATGSPPTQIHDPTHPLADENGDVWAAGVDTAQEMVEMIETARDYQNNVQVM 119

Query: 119 KQSHDMMTTTLDLLR 133
           + +  +   TL + R
Sbjct: 120 QTAKSLTLDTLKMER 134


>gi|84514835|ref|ZP_01002198.1| flagellar basal-body rod protein FlgC [Loktanella vestfoldensis
           SKA53]
 gi|84510994|gb|EAQ07448.1| flagellar basal-body rod protein FlgC [Loktanella vestfoldensis
           SKA53]
          Length = 139

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  +     IA   +A Q  R+  ++ NIANA  T        +R     F+    G   
Sbjct: 1   MADIKNVFDIAGRSMAAQMVRLNTVASNIANAN-TRSGSAEQTFRPLRPVFQTAFEGGIR 59

Query: 59  ----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                 V VK+I           +PGHP+A+  G V  P V++  E  DM E +R Y  N
Sbjct: 60  NAERATVDVKEIVALDREAQRVHEPGHPLADEEGFVYMPPVDMNEELVDMLEASRQYQNN 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L+ +     +M  T+D+ +
Sbjct: 120 LEVLTTMRTLMLRTVDMGK 138


>gi|228984828|ref|ZP_04145000.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228775026|gb|EEM23420.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 137

 Score =  143 bits (362), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMH- 56
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++  
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDR 59

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             + GV +K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  SPANGVNIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|260768785|ref|ZP_05877719.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|260616815|gb|EEX42000.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|315180488|gb|ADT87402.1| flagellar basal-body rod protein C [Vibrio furnissii NCTC 11218]
          Length = 140

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 9/130 (6%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--------GSGGVR 62
           + S +  Q+ R+  IS N+ANA +    P  D Y+     F  V +        GS  VR
Sbjct: 10  SGSAMMAQTIRLNTISSNLANADSVASNPN-DVYKPLKPVFTSVFNSLSAQSASGSVPVR 68

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           +  +          ++PGHP+AN  G V +  +NV+ E ADM  + R + AN++ +    
Sbjct: 69  IADVIEVSGMSESRYEPGHPLANNEGYVYHSGINVVNEMADMMSSTRSFEANVEVLNNVK 128

Query: 123 DMMTTTLDLL 132
            M  + + + 
Sbjct: 129 SMQQSLMRIW 138


>gi|306841051|ref|ZP_07473775.1| flagellar basal-body rod protein FlgC [Brucella sp. BO2]
 gi|306288940|gb|EFM60240.1| flagellar basal-body rod protein FlgC [Brucella sp. BO2]
          Length = 107

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/105 (51%), Positives = 76/105 (72%), Gaps = 3/105 (2%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
            ++T  T  +DPYRRKT+SF   +    G+  VRV ++G D S F+E++DP HP A+A G
Sbjct: 1   MQSTARTADADPYRRKTVSFRTELEQGTGAAEVRVAEVGKDTSPFIEQYDPSHPAADARG 60

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VKYPNVN++VE ADMRE NR Y ANLQ ++Q+ ++++ T+DLLR
Sbjct: 61  YVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLR 105


>gi|299822287|ref|ZP_07054173.1| flagellar basal-body rod protein FlgC [Listeria grayi DSM 20601]
 gi|299815816|gb|EFI83054.1| flagellar basal-body rod protein FlgC [Listeria grayi DSM 20601]
          Length = 136

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  S +   S L      M+I S+NIANA +    PG  PY RK++       FE  ++G
Sbjct: 1   MFESINTNGSALNAAKTWMEISSDNIANANS-SAAPGEAPYARKSVVLQEISPFEAKLNG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GV+V+ I  D       +DP HP ++  G V+Y N+++  E  ++    ++Y AN   
Sbjct: 60  VNGVKVENIVSDTKNVKTVYDPTHPNSDQDGYVRYANIDLTAEMTNIMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  M+   L++ +
Sbjct: 120 LQANEKMLDKELEIGK 135


>gi|149178731|ref|ZP_01857314.1| flagellar basal-body rod potein FlgC [Planctomyces maris DSM 8797]
 gi|148842429|gb|EDL56809.1| flagellar basal-body rod potein FlgC [Planctomyces maris DSM 8797]
          Length = 137

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD-TPGSDPYRRKTISFEE----VMHGS 58
           ++    I+ S L  Q  RM  I+ NIA    + D   G +P+ R+ ++F+     +   +
Sbjct: 1   MLKGIDISTSALVAQRQRMNTIAGNIAAVNVSHDPASGEEPFYRRMVTFQADTESLDQNA 60

Query: 59  GGVRVK-KIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            G  VK  + +D  +   + +DPGH  A+  G V YPN++++ E  +  E  R Y AN+ 
Sbjct: 61  SGTGVKYHVEIDTDTPLRKTYDPGHRHADQDGNVTYPNIDLVTEFVNALEAGRAYEANIS 120

Query: 117 TIKQSHDMMTTTLDLL 132
            +  + +M +T+L +L
Sbjct: 121 ALDITKEMFSTSLRIL 136


>gi|15639388|ref|NP_218837.1| flagellar basal body rod protein FlgC [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025630|ref|YP_001933402.1| flagellar basal body rod protein FlgC [Treponema pallidum subsp.
           pallidum SS14]
 gi|3322680|gb|AAC65385.1| flagellar basal-body rod protein (flgC) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018205|gb|ACD70823.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
          Length = 129

 Score =  142 bits (359), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 19/128 (14%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTI--------------SFEEVMHGSG-GVRVKKIGVD 69
           IS+NIANA +T    G    R + +                E++  G G GVRV  I  D
Sbjct: 2   ISDNIANASSTRTQEGGVFRRSRVVLAQKNPGIDWRIPFVPEQLDRGVGTGVRVVSIEKD 61

Query: 70  QSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            +     +DP HP A      +G V+YPNV+++ E  D+   +R Y AN+  I  S +M 
Sbjct: 62  NAPSRLVYDPTHPDAILSGPKAGYVEYPNVDIVTEMVDLISASRAYEANISVISGSKEMF 121

Query: 126 TTTLDLLR 133
              L++ R
Sbjct: 122 QRALEIAR 129


>gi|149191151|ref|ZP_01869409.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
 gi|148834989|gb|EDL51968.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
          Length = 142

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 12/143 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
           M +L      A S ++ Q+ R+  IS N+ANA +    P S  Y+     F  V +    
Sbjct: 1   MSFL-GIYETAGSAMSAQTVRLNTISSNLANADSVSGDP-SKVYKPLKPIFSAVYNHFNA 58

Query: 57  ---GSGGV---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                 GV   R+  +    S     ++P +P++N  G V Y  +NV+ E ADM    R 
Sbjct: 59  QETQHQGVVPIRIADVVEVSSMMEGRYEPNNPLSNDEGYVYYSGINVVNEMADMISATRS 118

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           + A+++ +     M  + + L R
Sbjct: 119 FEASVEVLGNVKSMQQSLMGLWR 141


>gi|148980304|ref|ZP_01815991.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
 gi|145961323|gb|EDK26633.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
          Length = 142

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 11/140 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
            +     A S ++ Q+ R+  IS N+ANA +    P S  Y+     F  V +       
Sbjct: 3   FLGIYETAGSAMSAQTVRLNTISSNLANADSVSGDP-SQVYKPLKPIFSAVYNHFNAQQT 61

Query: 57  GSGGV---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
              GV   R+  +    S     ++P +P++N  G V Y  +NV+ E ADM    R + A
Sbjct: 62  QQQGVVPIRIADVVEVSSMMEGRYEPNNPLSNDEGYVYYSGINVVNEMADMISATRSFEA 121

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           +++ +     M  + + L R
Sbjct: 122 SVEVLGNVKSMQQSLMGLWR 141


>gi|116619479|ref|YP_821635.1| flagellar basal-body rod protein FlgC [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116222641|gb|ABJ81350.1| flagellar basal-body rod protein FlgC [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 144

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 14/143 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L +   +  SG++ Q AR +++ EN+ANA TT  TP   PYRRK + FE     S    V
Sbjct: 3   LFSLLSVGASGMSAQRARAELLVENLANAETTR-TPEGGPYRRKDVVFETTTTASPFASV 61

Query: 64  -------------KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                          + VD S     + PGHP A+  G V +P +N   +  D+   +R 
Sbjct: 62  FNSELQSVNGVGVSDVVVDSSDPERRYMPGHPDADKDGYVAFPKINTAEDMVDLMGASRS 121

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           + AN+  +    DM+  ++DL R
Sbjct: 122 FEANVAAMSAVKDMIQRSIDLAR 144


>gi|145297453|ref|YP_001140294.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850225|gb|ABO88546.1| lateral flagellar basal body rod protein, LfgC [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 141

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 9/133 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--------GSGG 60
            IA S +  Q+ R+  ++ N+AN  +   +  +  +R     F  +          G+  
Sbjct: 8   DIAGSAMRAQTVRLDTVASNLANVDSAAGSEDA-AFRAIKPVFSTLYQRVQDADSLGAAQ 66

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V++  I        +  +P +P+A+  G V Y NVN + E ADM   +R +  +++ I +
Sbjct: 67  VQIAGIVQSDRQVDKRLEPTNPLADQDGFVYYSNVNAVEEMADMMSASRGFETSVEVINR 126

Query: 121 SHDMMTTTLDLLR 133
            + M    L L +
Sbjct: 127 INSMQQGLLRLGQ 139


>gi|262396037|ref|YP_003287890.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
 gi|262339631|gb|ACY53425.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
          Length = 131

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 12/130 (9%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-----------GGVRV 63
           +  Q+ R+  ++ N+ANA      P  D Y+     F  V   +             VR+
Sbjct: 1   MTAQTVRLNTVASNLANADAVSANPD-DAYKALKPVFATVYQKAQLTTENGVYPNAEVRI 59

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ +     
Sbjct: 60  VDVVKNAGEAEKRFEPNNPLANGEGYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKS 119

Query: 124 MMTTTLDLLR 133
           M    L L +
Sbjct: 120 MQQGLLRLGQ 129


>gi|206603156|gb|EDZ39636.1| Flagellar basal-body rod protein FlgC [Leptospirillum sp. Group II
           '5-way CG']
          Length = 145

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 15/142 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
              +  IA  G+  +  RM ++S N+AN+++    P    + R+ + F  V  G      
Sbjct: 3   FSDAMRIAAGGMEAERVRMNVLSGNLANSQSVHGNPRG-VFERRDVIFAAVRPGHSFFDV 61

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                      VRV  +  D       +DPG P A+ SG V  PNV+ L E  ++ + +R
Sbjct: 62  LRSPRESPVKEVRVMGMVRDPRPLNRVYDPGSPDADRSGYVLRPNVSKLEEMVNLLDASR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            Y +NL  +  +  M    L +
Sbjct: 122 AYESNLTALDDTKQMARKDLTI 143


>gi|124516313|gb|EAY57821.1| Flagellar basal-body rod protein FlgC [Leptospirillum rubarum]
          Length = 145

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 15/142 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
              +  IA  G+  +  RM +++ N+AN+++    P    + R+ + F  V  G      
Sbjct: 3   FSDAMRIAAGGMEAERVRMNVLAGNLANSQSVHGNPRG-VFERRDVIFAAVRPGHSFFDV 61

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                      VRV  +  D       +DPG P A+ SG V  PNV+ L E  ++ + +R
Sbjct: 62  LRSPRESPVKEVRVMGMVRDPRPLNRVYDPGSPDADRSGYVLRPNVSKLEEMVNLLDASR 121

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            Y +NL  +  +  M    L +
Sbjct: 122 AYESNLTALDDTKQMARKDLTI 143


>gi|167948872|ref|ZP_02535946.1| Flagellar basal-body rod protein FlgC [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 124

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 61/125 (48%), Gaps = 7/125 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------SGGVRVKKIGV 68
           ++ QS R+ +++ N+AN      +   + YR +   F  ++        + GV +  +  
Sbjct: 1   MSAQSLRLNLVASNMANVDAVSSSID-ETYRARQPVFRAMVDQFNPDAPAVGVSMVGVIE 59

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            Q+  + E+ P H +A+ +G +  PNVN + E A+M   +R Y  N++    +  ++  T
Sbjct: 60  SQAPLIREYAPDHQMADEAGYIFRPNVNPVEEMANMISASRSYQGNVEVASAAKQLLMAT 119

Query: 129 LDLLR 133
           L + +
Sbjct: 120 LRMGQ 124


>gi|74101656|gb|AAZ99746.1| FlgCL [Aeromonas hydrophila]
          Length = 141

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 9/133 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--------GSGG 60
            IA S +  Q+ R+  ++ N+AN  +   +  +  +R     F  +          G+  
Sbjct: 8   DIAGSAMRAQTVRLDTVASNLANVDSAAGSEEA-AFRAIKPVFSTLYQRVQDADSLGAAQ 66

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V++  I        +  +P +P+A+  G V Y NVN + E ADM   +R +  +++ I +
Sbjct: 67  VQIAGIVQSDRQVDKRLEPTNPLADQDGFVYYSNVNAVEEMADMMSASRGFETSVEVINR 126

Query: 121 SHDMMTTTLDLLR 133
            + M    L L +
Sbjct: 127 INSMQQGLLRLGQ 139


>gi|297520377|ref|ZP_06938763.1| flagellar basal body rod protein FlgC [Escherichia coli OP50]
          Length = 103

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 3/100 (3%)

Query: 37  DTPGSDPYRRKTISFE---EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             P   PYR K + F+        +GGV+V  +   Q+     ++PG+P+A+A G VK P
Sbjct: 4   TGPDGQPYRAKQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMP 63

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV+V+ E  +    +R Y AN++ +     MM  TL L +
Sbjct: 64  NVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ 103


>gi|254463222|ref|ZP_05076638.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
           HTCC2083]
 gi|206679811|gb|EDZ44298.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 126

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 50/120 (41%), Positives = 75/120 (62%), Gaps = 8/120 (6%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           GL  QSAR++ +SENIANA T G       Y RK +SF ++   +G V + ++ +DQS  
Sbjct: 14  GLKAQSARLRHVSENIANADTPG-------YHRKIVSF-DLSRDTGQVTIGRLSLDQSQL 65

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            E +DP HP+A+A G     NV++++E AD RE  R Y ANL+ + Q+  M ++ ++LLR
Sbjct: 66  REIYDPSHPLADAKGNYDSSNVDLIIEIADAREAQRSYEANLKMLDQTRQMSSSLIELLR 125


>gi|220913734|ref|YP_002489043.1| flagellar basal-body rod protein FlgC [Arthrobacter
           chlorophenolicus A6]
 gi|219860612|gb|ACL40954.1| flagellar basal-body rod protein FlgC [Arthrobacter
           chlorophenolicus A6]
          Length = 130

 Score =  140 bits (353), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 2/129 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             +  IA + L V    +  +S+N+AN      T   + +R + I   E   G+ GV V+
Sbjct: 3   FDAIGIAGTALTVHRKWLDAVSDNLANMNNAART-DGEAFRARYIEAAEGTDGT-GVYVR 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                 +     + P HP+A+A G V+YP++++  +   +    R Y AN Q + ++ + 
Sbjct: 61  STPEGDAEGRMVYQPDHPLADAEGYVRYPDIDLAEQMGALIVAQRGYQANAQVVDRARET 120

Query: 125 MTTTLDLLR 133
               L++ +
Sbjct: 121 YLAALEIGK 129


>gi|103488385|ref|YP_617946.1| flagellar basal-body rod protein FlgC [Sphingopyxis alaskensis
           RB2256]
 gi|98978462|gb|ABF54613.1| flagellar basal-body rod protein FlgC [Sphingopyxis alaskensis
           RB2256]
          Length = 267

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 3/135 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--GS 58
           M+   +   I+   ++ Q  R+   + N+ANA T   +     +R     F  VM   G 
Sbjct: 134 MNGSFSVFDISGRAMSAQLVRLNTTASNLANAGTVAGSEAG-AFRSLKPVFRTVMDDHGR 192

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V++ +I   +    +  DP +P+A+A G V    V+   E  +M ET R Y  N+Q +
Sbjct: 193 ATVQIDQITTSKMAPSKRHDPSNPLADADGNVWEAAVDSAAELVEMVETARQYQNNVQVL 252

Query: 119 KQSHDMMTTTLDLLR 133
           + +  ++  TL + +
Sbjct: 253 ETAKGLINETLRMGQ 267


>gi|121997321|ref|YP_001002108.1| flagellar basal-body rod protein FlgC [Halorhodospira halophila
           SL1]
 gi|121588726|gb|ABM61306.1| flagellar basal-body rod protein FlgC [Halorhodospira halophila
           SL1]
          Length = 189

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 65/188 (34%), Gaps = 59/188 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT--------------- 48
           L+ +  +A +G+  Q  R+  ++ N+ANA T   +P  + YR +                
Sbjct: 3   LMNAIDVAGTGMNAQQLRLNTVASNLANAETVASSP-EEAYRARQPVFAAALHQAQGGYP 61

Query: 49  -------------------------ISFEEVMHG----------------SGGVRVK--K 65
                                    +SF+    G                S  V V    
Sbjct: 62  QGGGPQPAHTPTWAESGGPVDRISPVSFQRQFFGGEPAGVPSAGDPYASPSPSVPVFMPG 121

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +    +     + P HP A+  G V   NVN + E  +M   +R +  N++ +  S D+M
Sbjct: 122 VVESDAEIEPLYQPHHPQADDDGYVYRSNVNTVEEMTNMISASRSFQNNVEVMNTSRDLM 181

Query: 126 TTTLDLLR 133
             TL L R
Sbjct: 182 LETLRLGR 189


>gi|255022067|ref|ZP_05294073.1| flagellar basal-body rod protein FlgC [Acidithiobacillus caldus
           ATCC 51756]
 gi|254968553|gb|EET26109.1| flagellar basal-body rod protein FlgC [Acidithiobacillus caldus
           ATCC 51756]
          Length = 141

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 8/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           +I +  +  + ++ Q+AR+  +  N+ANA +   + G  PY+ + + FE V  G+     
Sbjct: 8   IINALSVTGAAMSAQNARLGAVVSNLANANSVTSSTG-TPYKAREVVFEAVPDGTASGGI 66

Query: 61  ----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               VRV  +   Q+     ++PG+P+AN +G V+  NVN +    DM   +R Y  ++ 
Sbjct: 67  PLESVRVAGVVQSQAPSPLLYEPGNPLANKAGYVRGSNVNPIESMVDMLSASRAYQDDVT 126

Query: 117 TIKQSHDMMTTTLDL 131
                  +   TL L
Sbjct: 127 AANVLKTIAMKTLSL 141


>gi|218506433|ref|ZP_03504311.1| flagellar basal body rod protein FlgC [Rhizobium etli Brasil 5]
          Length = 102

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/102 (61%), Positives = 76/102 (74%), Gaps = 3/102 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M    G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDHVSG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           V    VKK+GVD+  F  EFDP +P A+A G+VK PNVNVLV
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADARGVVKLPNVNVLV 102


>gi|254496885|ref|ZP_05109733.1| flagellar basal body rod protein FlgC [Legionella drancourtii
           LLAP12]
 gi|254353904|gb|EET12591.1| flagellar basal body rod protein FlgC [Legionella drancourtii
           LLAP12]
          Length = 140

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           L +   IA S L  ++AR+   + N++NA         D YR K   F+ V   +     
Sbjct: 3   LGSVFDIAGSALTAETARLTTSASNMSNAN-VESGNVDDVYRVKYPIFKTVQENATQWMG 61

Query: 59  ----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                GV++K   V  +  ++ + P +P A+A G +  PNVN + E A++   +R Y  N
Sbjct: 62  DQINAGVQLKGTYVSTADPIKHYQPNNPQADAKGFIYTPNVNYVDEMANVISASRSYQMN 121

Query: 115 LQTIKQSHDMMTTTLDLL 132
           ++ +  +  ++  TL L 
Sbjct: 122 IELVNNAKQLIQRTLQLG 139


>gi|284989558|ref|YP_003408112.1| hypothetical protein Gobs_0980 [Geodermatophilus obscurus DSM
           43160]
 gi|284062803|gb|ADB73741.1| protein of unknown function DUF1078 domain protein
           [Geodermatophilus obscurus DSM 43160]
          Length = 134

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 3/131 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVR 62
             S  I+ SGL V    +  +S+NIAN      T   D ++ + I  + V +GSG  GVR
Sbjct: 4   FDSLGISGSGLLVHRKWLDAVSDNIANINNVTST-DQDAFQERLIVAQAVDYGSGEGGVR 62

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V +     +      +P HP+A+A+G V+YP++++  +   +    R Y ANL  ++++ 
Sbjct: 63  VARAEYGSAEGRMVHEPDHPLADANGYVRYPDIDLGDQMTQLIMAQRGYQANLAVVERAT 122

Query: 123 DMMTTTLDLLR 133
                 L L +
Sbjct: 123 TAYQAALQLGK 133


>gi|238762361|ref|ZP_04623332.1| Flagellar basal-body rod protein FlgC [Yersinia kristensenii ATCC
           33638]
 gi|238699346|gb|EEP92092.1| Flagellar basal-body rod protein FlgC [Yersinia kristensenii ATCC
           33638]
          Length = 141

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 10/136 (7%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------MHG 57
               I+ S +  Q+ R+  I+ N+ANA +   +      + ++  F  V          G
Sbjct: 5   NIYRISGSAMTAQTIRLNTIASNLANADSPAASAAEAY-KARSPIFSAVYSPRSAANPRG 63

Query: 58  SGGVRVKKI-GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             G +V+ +  V+    V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  N++
Sbjct: 64  VNGAQVQVLDVVEVRETVQRYEPNHPLANPQGYVFYPAVNVVSEMADMMSASRSFETNVE 123

Query: 117 TIKQSHDMMTTTLDLL 132
            +     M  + L L 
Sbjct: 124 VLNSVKSMQQSVLKLG 139


>gi|313634361|gb|EFS00958.1| flagellar basal-body rod protein FlgC [Listeria seeligeri FSL
           N1-067]
          Length = 138

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 9/138 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA +    PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADS-SAAPGETPFLRKRVVMSEISPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTF--VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           + GV+V +I  D  +      +DP HP AN +G V Y NV++  E  ++    ++Y AN 
Sbjct: 60  TKGVKVSEISSDTGSVNVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANT 119

Query: 116 QTIKQSHDMMTTTLDLLR 133
             ++ +  MM   L++ +
Sbjct: 120 SALQANEKMMEKDLEIGK 137


>gi|89056688|ref|YP_512139.1| flagellar basal body rod protein FlgC [Jannaschia sp. CCS1]
 gi|88866237|gb|ABD57114.1| flagellar basal-body rod protein FlgC [Jannaschia sp. CCS1]
          Length = 130

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 12/137 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M     +  +A SG+  Q+ R+  +SENIANA T G       Y+RK  SFE V  G   
Sbjct: 1   MTDFSNALSVAASGMRAQTQRLTHVSENIANADTPG-------YQRKITSFE-VERGFSA 52

Query: 58  -SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             G VR   + +DQ+     FDP HP+A+ +G  +  NV++++E AD RE NR Y ANL+
Sbjct: 53  VEGQVRTGPVRLDQTALPVIFDPSHPMADEAGSYEGSNVDLVIELADAREANRSYEANLR 112

Query: 117 TIKQSHDMMTTTLDLLR 133
              Q   M ++  DLLR
Sbjct: 113 IFDQIRQMSSSLNDLLR 129


>gi|254463002|ref|ZP_05076418.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
           HTCC2083]
 gi|206679591|gb|EDZ44078.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 139

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  +     IA   +A Q  R+  ++ NIANA     +   D YR     F+ V      
Sbjct: 1   MSDIKNVFDIAGRSMAAQMVRLNTVASNIANAEARAGS-AEDAYRPLRPVFQTVFEDGMR 59

Query: 59  ----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                 V V+ +       +   +PGHP+A+  G V    V+V  E  DM E +R Y  N
Sbjct: 60  NAERASVEVRDVIALDREPLRVHEPGHPLADEEGYVYIAPVDVNEEMVDMIEASRQYQNN 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L+ +     +M  T+++ +
Sbjct: 120 LEVVTTMRTLMMRTVNMGK 138


>gi|119384843|ref|YP_915899.1| flagellar basal body rod protein FlgC [Paracoccus denitrificans
           PD1222]
 gi|119374610|gb|ABL70203.1| flagellar basal body rod protein [Paracoccus denitrificans PD1222]
          Length = 130

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---G 57
           M   +++  +A SG+  Q+ R++ ISENIANA T G       YRRK ++F E +     
Sbjct: 1   MTNSLSATELAVSGMKSQAVRLRHISENIANADTPG-------YRRKLVAFREQVDFGRP 53

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +G V       D+       DP HP+A+  G     NV++++E AD +E  R Y ANL+ 
Sbjct: 54  TGAVTPGPPRFDRRELPRIHDPAHPMADEEGYYSGSNVDLIIEIADAKEAGRSYEANLRV 113

Query: 118 IKQSHDMMTTTLDLLR 133
            +QS  M ++ LDL+R
Sbjct: 114 FEQSRQMGSSLLDLIR 129


>gi|126730138|ref|ZP_01745950.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37]
 gi|126709518|gb|EBA08572.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37]
          Length = 129

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 9/135 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  + + GL  Q+AR++++SENIAN  T G       YRRK ++F      S  
Sbjct: 1   MSAFSDALSVTSGGLTSQAARLRVVSENIANVDTPG-------YRRKQLNFAVTRGDSSL 53

Query: 61  VRVK--KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            RV+  ++ + ++   E +DP HP+A+ +G     NV++++E AD RE  R Y ANL+  
Sbjct: 54  ARVEPGRMDLSRTPLEEVYDPSHPLADETGKYLGSNVDLMIELADAREAQRSYEANLKMF 113

Query: 119 KQSHDMMTTTLDLLR 133
            Q+  M +  LDLLR
Sbjct: 114 DQTRQMSSALLDLLR 128


>gi|146278635|ref|YP_001168794.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556876|gb|ABP71489.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 126

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 8/120 (6%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           G+  Q+ R++ +SENIAN  T G       + RKT+SF+     SG V    + +D+S+ 
Sbjct: 14  GMRSQALRLRHVSENIANVDTPG-------FHRKTVSFQSEPD-SGLVSTGPVRLDRSSL 65

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            + +DPGHP+A+ +G     NVN++VE AD RE  R Y ANL+   Q+  M  +  DLLR
Sbjct: 66  QKMYDPGHPMADDTGYYDGSNVNLVVEIADAREAQRSYEANLRMFDQARQMTQSLFDLLR 125


>gi|329898291|ref|ZP_08272374.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC3088]
 gi|328920856|gb|EGG28299.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC3088]
          Length = 141

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 10/139 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGV 61
           L     IA S LA Q+ R+   + N+ANA     T   D Y+ K + F  V+     G V
Sbjct: 3   LTDIFDIAGSALAGQTTRLHATASNMANASNVSST-AEDAYKAKRVVFRTVLEDQIIGNV 61

Query: 62  R-------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           R       V  +  D S   + +DP +P+A+  G V   NV  + E  +M    R Y  N
Sbjct: 62  RRPAGSLLVDGVKDDPSPHRKLYDPSNPLADEDGYVYQSNVEEVEEVVEMLAAARSYQNN 121

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ I  +  +MT TL++L+
Sbjct: 122 VEVINTAKQLMTRTLEVLK 140


>gi|315125982|ref|YP_004067985.1| LfgC [Pseudoalteromonas sp. SM9913]
 gi|315014496|gb|ADT67834.1| LfgC [Pseudoalteromonas sp. SM9913]
          Length = 138

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 8/135 (5%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------S 58
           +    + S +  Q  R+  I+ N+ANA T   +  +D Y+     F  +          S
Sbjct: 5   SIYDASGSAMRAQVIRLDTIASNLANADTAAGSE-ADAYKALKPVFSALYKQTQDSQSIS 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V V  I        + ++P +P+AN  G V Y NVN L E ADM   +R Y  +++ +
Sbjct: 64  ASVDVLGITESNRAVEQRYEPNNPIANNDGYVFYSNVNALEEMADMMSASRSYQTSVEVM 123

Query: 119 KQSHDMMTTTLDLLR 133
            + + M  + L L +
Sbjct: 124 GRVNSMQQSILKLGQ 138


>gi|331005439|ref|ZP_08328818.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
 gi|330420715|gb|EGG95002.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
          Length = 144

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 15/146 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M+Y  +   I+ +G++VQ AR+ +++ N+AN+ TT    G  PY+   +S  E +     
Sbjct: 1   MNY-FSIFDISAAGMSVQKARVDVVALNLANSETTKTAAGG-PYKPLQVSISEAIGSRSF 58

Query: 61  VRV-KKIGVD------------QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           V    + G D                     P HP A++ G+V YPN+N   E  ++ E 
Sbjct: 59  VDTLNQTGSDLYGSYVSKVSSVSEPIKMVHKPNHPDADSEGMVAYPNINPASEMVNLLEA 118

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN++ +  S  +   TL++ +
Sbjct: 119 TRAYEANVKALNASISLAQATLEIGK 144


>gi|304321145|ref|YP_003854788.1| putative flagellar basal-body rod protein FlgC [Parvularcula
           bermudensis HTCC2503]
 gi|303300047|gb|ADM09646.1| putative flagellar basal-body rod protein FlgC [Parvularcula
           bermudensis HTCC2503]
          Length = 127

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 9/132 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L+ S  IA  G+  QS RM+ ++EN++N  T G       Y+RK ++F      +  V
Sbjct: 3   DPLLTSLRIAGDGMNAQSFRMRTVNENLSNIDTPG-------YQRKMLTFSTGNEQA--V 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           RV ++ +      +  DPGHP+A+A G V+  NV++L E +D RE  R + AN++  +Q+
Sbjct: 54  RVSRMILSSDEARKVHDPGHPLADADGFVEMSNVDMLTELSDAREAKRSFDANIEAFRQA 113

Query: 122 HDMMTTTLDLLR 133
            +M    + L+R
Sbjct: 114 REMYAGLISLMR 125


>gi|315927025|gb|EFV06380.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 144

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 33/144 (22%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISF----------EEVMHGSGGVRVKKIGVDQS 71
           M +IS NIANA TT    G  PYRR+ + F          E++   +  ++ +    D S
Sbjct: 1   MNVISSNIANANTTRTAEGG-PYRRREVIFKATDFDKLLNEQINKDNNFLKYENPLNDPS 59

Query: 72  T----------------------FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
           +                      F  ++DP HP ANA G V YPNVN ++E AD+ E  R
Sbjct: 60  SPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATR 119

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+     +  +  + +DLLR
Sbjct: 120 AYQANVSAFTSAKTISQSAIDLLR 143


>gi|269796400|ref|YP_003315855.1| flagellar basal-body rod protein FlgC [Sanguibacter keddieii DSM
           10542]
 gi|269098585|gb|ACZ23021.1| flagellar basal-body rod protein FlgC [Sanguibacter keddieii DSM
           10542]
          Length = 134

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 3/131 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--MHGSGGVR 62
             +  IA++G+ V    +  +S+N+AN  T   +     ++ + +    V       GV+
Sbjct: 4   FGAIGIASTGMTVNRKWLDAVSDNLANINTVRPS-DEAAFQARYVVASAVGYPENGQGVQ 62

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V  I +  +      +P HP+A+A G VKYP V++  + + M    R Y AN   + ++ 
Sbjct: 63  VAGIELGSAEGRMVHEPDHPLADAEGYVKYPEVDMAGQMSQMIMAQRGYQANASVVDRAK 122

Query: 123 DMMTTTLDLLR 133
                 L + R
Sbjct: 123 ATYEAALQIGR 133


>gi|148554191|ref|YP_001261773.1| flagellar basal-body rod protein FlgC [Sphingomonas wittichii RW1]
 gi|148499381|gb|ABQ67635.1| flagellar basal-body rod protein FlgC [Sphingomonas wittichii RW1]
          Length = 134

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 3/131 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVR 62
           ++   IA   ++ Q  R+   + N+ANA +   +  ++ +R     F  V    G   V+
Sbjct: 5   LSVFDIAGRAMSAQMVRLNTSASNLANAGSVAGSK-AEAFRAIKPVFSSVTDAPGVATVK 63

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V ++        + +DP HP A+  G V    V+   E  +M ET R Y  N+  ++ + 
Sbjct: 64  VDQVVASNIEPTKRYDPNHPKADKDGNVWEAGVDQAQELVEMMETARQYQNNVSVMQTAK 123

Query: 123 DMMTTTLDLLR 133
            +   TL L +
Sbjct: 124 TLTLDTLRLGK 134


>gi|256833243|ref|YP_003161970.1| flagellar basal body rod protein [Jonesia denitrificans DSM 20603]
 gi|256686774|gb|ACV09667.1| flagellar basal body rod protein [Jonesia denitrificans DSM 20603]
          Length = 134

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 63/132 (47%), Gaps = 3/132 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--MHGSGGVR 62
             +  IA++GL V    +  +S+N+AN  T   T   + ++ + +  +       + G +
Sbjct: 4   FGAIGIASTGLTVNRKWLDAVSDNLANVNTVRPT-DEEAFQARYVIAQAAGGPRDTAGTQ 62

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V  I +  +     ++P HP+A+  G V+YP++++  + + +    R Y A+   ++++ 
Sbjct: 63  VAGIELGSAEGRLVYEPDHPLADEGGYVRYPDIDLSSQMSQLIMAQRGYQASTAVVERAR 122

Query: 123 DMMTTTLDLLRD 134
                 L + R+
Sbjct: 123 ATYEQALSIGRN 134


>gi|94495413|ref|ZP_01301993.1| flagellar cell-proximal portion protein [Sphingomonas sp. SKA58]
 gi|94424801|gb|EAT09822.1| flagellar cell-proximal portion protein [Sphingomonas sp. SKA58]
          Length = 138

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 3/131 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVR 62
           +    IA   ++ Q  R+   + N+ANA     +   D YR     F  V    G   V+
Sbjct: 9   MNIFDIAGRAMSAQLVRLNTTASNMANAGNVTGS-AQDAYRAIKPVFTSVTDSPGVSTVK 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V  +   ++   +  DP HP+A+A+G V    V+   E  DM ET R+Y  N+Q +  + 
Sbjct: 68  VSDVVTTKAEPTKRHDPNHPLADANGDVWEAAVDSNAELVDMIETARMYQNNVQVLNTAK 127

Query: 123 DMMTTTLDLLR 133
            +M  T+ + +
Sbjct: 128 SLMLETIRIGK 138


>gi|114797235|ref|YP_759001.1| flagellar basal-body rod protein [Hyphomonas neptunium ATCC 15444]
 gi|114737409|gb|ABI75534.1| flagellar basal-body rod protein [Hyphomonas neptunium ATCC 15444]
          Length = 128

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/134 (36%), Positives = 78/134 (58%), Gaps = 8/134 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M+ L A+   A +G+ +QS RM + +ENI+NA T G       Y+RK +  E+    SG 
Sbjct: 1   MNPLKATQQQAVAGMELQSRRMGVTAENISNADTPG-------YKRKLLMVEQSQLSSGE 53

Query: 61  V-RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                ++ +D++    +++P HP+A+  G V   NV+++ E ADMRE NR Y ANL + +
Sbjct: 54  QFMASRVQLDEAEAKRDYNPEHPMADGEGYVTLSNVSIVTEMADMREANRSYEANLNSFQ 113

Query: 120 QSHDMMTTTLDLLR 133
           Q+  M  + LD+LR
Sbjct: 114 QARSMYRSLLDILR 127


>gi|323178496|gb|EFZ64074.1| flagellar basal-body rod protein FlgC [Escherichia coli 1180]
          Length = 130

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 14/130 (10%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------------GGVR 62
           +  Q+ R+  ++ N+ANA     +  +  Y+ ++  F  V H S              V+
Sbjct: 1   MTAQTLRLNTVASNLANANAPASSE-AQAYKARSPVFAAVYHHSLLAGTHRHAIDGASVQ 59

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V+ +       V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +  N+  +    
Sbjct: 60  VQDVLQ-TGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVDVLNNVK 118

Query: 123 DMMTTTLDLL 132
            M  + L L 
Sbjct: 119 SMQQSLLKLG 128


>gi|269965642|ref|ZP_06179755.1| Flagellar basal-body rod protein C [Vibrio alginolyticus 40B]
 gi|269829710|gb|EEZ83946.1| Flagellar basal-body rod protein C [Vibrio alginolyticus 40B]
          Length = 138

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 12/131 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
                 I  S +  Q+ R+  ++ N+ANA      P  D Y+     F  V         
Sbjct: 3   FTDIYSITGSAMTAQTVRLNTVASNLANADAVSANP-EDAYKALKPVFATVYQKTQMTTE 61

Query: 57  ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                +  VR+  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R + 
Sbjct: 62  NGAYPNAEVRIVDVVKNAGDAEKRFEPNNPLANDEGYVFYPDIDVVAEMADMMSATRSFE 121

Query: 113 ANLQTIKQSHD 123
            N++ +     
Sbjct: 122 TNVEVLANVKK 132


>gi|152965614|ref|YP_001361398.1| hypothetical protein Krad_1648 [Kineococcus radiotolerans SRS30216]
 gi|151360131|gb|ABS03134.1| protein of unknown function DUF1078 domain protein [Kineococcus
           radiotolerans SRS30216]
          Length = 131

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 2/130 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  IA +G+ V    M  +S+N+AN  T   T   D +  + +   E   G  G +V
Sbjct: 3   IFDAIGIAGTGVTVNRKWMDAVSDNLANINTATRT-DEDAFAARYVVAAEAADG-KGTQV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             I    +      +P +P+A+ +G VKYP++++  +   +    R Y ANLQTI  + +
Sbjct: 61  AGIVTGSTEGRMVHEPDNPLADENGYVKYPDIDMSSQMTSLMMAQRAYQANLQTITSAKE 120

Query: 124 MMTTTLDLLR 133
             +  L L +
Sbjct: 121 AYSAALQLGK 130


>gi|325567533|ref|ZP_08144200.1| flagellar basal-body rod protein FlgC [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158966|gb|EGC71112.1| flagellar basal-body rod protein FlgC [Enterococcus casseliflavus
           ATCC 12755]
          Length = 138

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 9/137 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +     I  SGLA++  ++  IS NIAN   T  T  +  Y++K+I F E +  S     
Sbjct: 3   IFNGLTINASGLALERLKLDTISSNIANVN-TNQTQTTAAYQKKSILFSENLKNSREGTP 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV+V  I  D++     +DP +P ANA G V   NV++  E   M +  R Y AN+ 
Sbjct: 62  ATYGVKVTGIAADETE-KLTYDPTNPAANAEGYVGQSNVDIADEMVAMLQAVRTYEANVS 120

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  ++   L++ +
Sbjct: 121 ASEMNKTILKKALEISK 137


>gi|298345988|ref|YP_003718675.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
 gi|304390254|ref|ZP_07372208.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315654575|ref|ZP_07907481.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii ATCC
           51333]
 gi|315657519|ref|ZP_07910401.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|298236049|gb|ADI67181.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
 gi|304326736|gb|EFL93980.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315491039|gb|EFU80658.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii ATCC
           51333]
 gi|315491991|gb|EFU81600.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 132

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 2/130 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-SGGVRV 63
             +  IA +G+ V    +  IS+NIAN  TT      + +R + +  + V +G   G  V
Sbjct: 4   FGAIGIAGTGMTVNRKWLDCISDNIANINTT-KPMNEEAFRARYVVAQAVDYGRPAGTMV 62

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             I +  +     +DP  P AN  G V++P++++  +   +    R Y AN   + ++  
Sbjct: 63  SGIALGGTDGRIVYDPRDPNANEEGYVRHPDIDLGSQMTQLIMAQRAYQANAAVVDRAKS 122

Query: 124 MMTTTLDLLR 133
                L + R
Sbjct: 123 TYEAALQIGR 132


>gi|294013084|ref|YP_003546544.1| flagellar basal-body rod protein FlgC [Sphingobium japonicum UT26S]
 gi|292676414|dbj|BAI97932.1| flagellar basal-body rod protein FlgC [Sphingobium japonicum UT26S]
          Length = 138

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 3/131 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVR 62
           +    IA   ++ Q  R+   + N+ANA     +  ++ YR     F+ V    G   V+
Sbjct: 9   MNVFDIAGRAMSAQLVRLNATASNMANAGNVTGS-AAEAYRAIKPVFQSVTDSPGVSTVK 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V+ +    +   +  DP HP+A+ +G V    V+   E  DM ET R+Y  N+Q +  + 
Sbjct: 68  VQNVVTTNAQPTKRHDPNHPLADKNGDVWEAAVDSSAELVDMIETARMYQNNVQVLNTAK 127

Query: 123 DMMTTTLDLLR 133
            +M  T+ + +
Sbjct: 128 SLMMETIRIGK 138


>gi|307293789|ref|ZP_07573633.1| flagellar basal-body rod protein FlgC [Sphingobium chlorophenolicum
           L-1]
 gi|306879940|gb|EFN11157.1| flagellar basal-body rod protein FlgC [Sphingobium chlorophenolicum
           L-1]
          Length = 136

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 3/131 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVR 62
           +    IA   ++ Q  R+   + N+ANA     +  ++ YR     F+ V    G   V+
Sbjct: 7   MNVFDIAGRAMSAQLVRLNATASNMANAGNVTGS-AAEAYRAIKPVFQSVTDSPGVSTVK 65

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V+ +    +   +  DP HP+A+ +G V    V+   E  DM ET R+Y  N+Q +  + 
Sbjct: 66  VQNVVTTNAQPTKRHDPNHPLADKNGDVWEAAVDSSAELVDMIETARMYQNNVQVLNTAK 125

Query: 123 DMMTTTLDLLR 133
            +M  T+ + +
Sbjct: 126 SLMMETIRIGK 136


>gi|257866376|ref|ZP_05646029.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC30]
 gi|257871287|ref|ZP_05650940.1| flagellar basal body rod protein FlgC [Enterococcus gallinarum EG2]
 gi|257873108|ref|ZP_05652761.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC10]
 gi|257875989|ref|ZP_05655642.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC20]
 gi|257800334|gb|EEV29362.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC30]
 gi|257805451|gb|EEV34273.1| flagellar basal body rod protein FlgC [Enterococcus gallinarum EG2]
 gi|257807272|gb|EEV36094.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC10]
 gi|257810155|gb|EEV38975.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC20]
          Length = 138

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +     I  SGLA++  ++  IS NIAN   T  T  +  Y++K+I F E +  S     
Sbjct: 3   MFNGLTINASGLALERLKLDTISSNIANVN-TNQTQTTAAYQKKSILFSENLKNSREGTP 61

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV+V  I  D++     +DP +P AN  G V   NV++  E   M +  R Y AN+ 
Sbjct: 62  ATYGVKVTGIAADETE-KLTYDPTNPAANDEGYVGQSNVDIADEMVAMLQAVRTYEANVS 120

Query: 117 TIKQSHDMMTTTLDLLR 133
             + +  ++   L++ +
Sbjct: 121 ASEMNKTILKKALEISK 137


>gi|291334310|gb|ADD93971.1| predicted flagellar proximal rod protein [uncultured marine
           bacterium MedDCM-OCT-S09-C247]
          Length = 138

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L     +A  G++ Q  R+  ++ N+ANAR+   +  ++ YR     F  +      
Sbjct: 1   MADLKNIFDVAARGMSAQMVRLNTVASNLANARSVASSE-AEAYRAIKPVFSTLYADDLE 59

Query: 56  -HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
             G   V V  I        + + PGHP A+  G +    VN   E  +M E +R Y  N
Sbjct: 60  RSGVSSVDVVDIVAVDREPEKVYQPGHPKADEDGYIYMAAVNTEEELVEMLEASRQYENN 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ +     +M  T+ + +
Sbjct: 120 VEVVSTLRGLMMRTISMGK 138


>gi|228964727|ref|ZP_04125834.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228794977|gb|EEM42476.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 128

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 10/128 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++       F  ++ G
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDG 59

Query: 58  S--GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHD 123
             +  +  
Sbjct: 119 SVLNANKK 126


>gi|27904802|ref|NP_777928.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|46395818|sp|Q89AH9|FLGC_BUCBP RecName: Full=Flagellar basal-body rod protein flgC
 gi|27904200|gb|AAO27033.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 136

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 71/134 (52%), Gaps = 4/134 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTI--SFEEV-MHGSG 59
           L    +I+ S L  QS +M + ++N+AN+ +     G+  PY  +     F+ +  +  G
Sbjct: 3   LFNIFNISGSALETQSKKMDVHAKNLANSDSYIYKNGTLYPYVARIPMLQFDPISENNVG 62

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV++  +  D S+    ++P  P+A+++G  K  NV+++ ET +    ++ Y  NL+ + 
Sbjct: 63  GVKMHTVAGDTSSLKSIYNPNSPIADSNGYSKVSNVDIMSETINAITASKNYQTNLEILN 122

Query: 120 QSHDMMTTTLDLLR 133
            + +M+  TL + +
Sbjct: 123 TTKNMIMKTLTIGQ 136


>gi|227876737|ref|ZP_03994846.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243]
 gi|269976264|ref|ZP_06183260.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris 28-1]
 gi|306817684|ref|ZP_07451426.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris ATCC
           35239]
 gi|307699910|ref|ZP_07636961.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris
           FB024-16]
 gi|227842634|gb|EEJ52834.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243]
 gi|269935593|gb|EEZ92131.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris 28-1]
 gi|304649498|gb|EFM46781.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris ATCC
           35239]
 gi|307614948|gb|EFN94166.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris
           FB024-16]
          Length = 132

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 2/130 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-SGGVRV 63
             +  IA +G+ V    +  IS+NIAN  TT      + +R + +  + V +G   G  V
Sbjct: 4   FGAIGIAGTGMTVNRKWLDCISDNIANINTT-KPMNEEAFRARYVVAQAVDYGRPAGTMV 62

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             I +  +     +DP  P ANA G V++P++++  + + +    R Y AN   + ++  
Sbjct: 63  AGIALGGTDGRIVYDPKDPNANAEGYVRHPDIDLGSQMSQLIMAQRAYQANAAVVDRAKA 122

Query: 124 MMTTTLDLLR 133
              + L + R
Sbjct: 123 TYESALQIGR 132


>gi|313620054|gb|EFR91569.1| flagellar basal-body rod protein FlgC [Listeria innocua FSL S4-378]
          Length = 121

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 7/122 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA +    PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADS-SAAPGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IK 119
           ++
Sbjct: 120 LQ 121


>gi|149908761|ref|ZP_01897422.1| LfgC [Moritella sp. PE36]
 gi|149808303|gb|EDM68242.1| LfgC [Moritella sp. PE36]
          Length = 140

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 9/136 (6%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------- 58
               IA SG+  Q+ R+  ++ N+AN  +   +   + Y      F  +   S       
Sbjct: 5   NIYEIAGSGMRSQTLRLNTVASNLANVNSAASSE-KEAYHALKPIFSTIYQTSQETLEVT 63

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V +  +   Q      ++P + +AN  G V Y NVN + E ADM   +R + ++ + 
Sbjct: 64  GASVNMLGVTRSQQAIERRYEPENTLANNDGYVFYSNVNAVAEMADMMSASRSFESSAEV 123

Query: 118 IKQSHDMMTTTLDLLR 133
           +++ + M  + L L +
Sbjct: 124 MRRVNSMQQSLLRLGQ 139


>gi|255028426|ref|ZP_05300377.1| flagellar basal body rod protein FlgC [Listeria monocytogenes LO28]
          Length = 124

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 7/124 (5%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHGSGGVRVKKIGVD 69
                 M++ S NIANA +    PG  P+ RK +       FE  + G+ GV+V +I  D
Sbjct: 1   NAAKQWMEVSSNNIANADS-SAAPGETPFLRKRVVLSEITPFETALTGTKGVKVSEISSD 59

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   ++ +  MM   L
Sbjct: 60  TGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEKDL 119

Query: 130 DLLR 133
           ++ +
Sbjct: 120 EIGK 123


>gi|307823529|ref|ZP_07653758.1| flagellar basal-body rod protein FlgC [Methylobacter tundripaludum
           SV96]
 gi|307735514|gb|EFO06362.1| flagellar basal-body rod protein FlgC [Methylobacter tundripaludum
           SV96]
          Length = 138

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 8/135 (5%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------GS 58
           +   IA SG+  QS R+ +++    +   +  +  +D Y+ +   F   +         +
Sbjct: 5   SIFDIAGSGMNAQSLRLNLVAS-NISNANSVSSSAADVYKSRQPVFAAELDKVINKQNAT 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V V  +   Q   V E+ P HP+AN+ G +   NVN + E A+M   +R Y  N+  +
Sbjct: 64  SKVNVLGVVEGQDAPVMEYAPNHPMANSDGYIFKSNVNTVEEMANMMSASRSYQNNVDVL 123

Query: 119 KQSHDMMTTTLDLLR 133
             +  MM  TL + +
Sbjct: 124 NTAKQMMLQTLKMGQ 138


>gi|332187874|ref|ZP_08389607.1| flagellar basal-body rod protein FlgC [Sphingomonas sp. S17]
 gi|332012035|gb|EGI54107.1| flagellar basal-body rod protein FlgC [Sphingomonas sp. S17]
          Length = 136

 Score =  130 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 4/132 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---V 61
           ++   ++   ++ Q  RM   + N+ANA     +     Y+     F      + G   V
Sbjct: 6   LSIFQVSGRAMSAQLVRMNTTASNLANAGGIAGSV-ETAYKTMKPVFRTSFDAATGLSTV 64

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V+KI        +  DP +P+A+  G V    V+   E  DM ET R Y  N++ ++ +
Sbjct: 65  DVEKIVTAGEDPTKRHDPNNPLADKDGNVFEAAVDETRELVDMMETARTYQNNVEVMQTA 124

Query: 122 HDMMTTTLDLLR 133
             ++  TL L R
Sbjct: 125 KSLILDTLKLGR 136


>gi|256376475|ref|YP_003100135.1| hypothetical protein Amir_2349 [Actinosynnema mirum DSM 43827]
 gi|255920778|gb|ACU36289.1| protein of unknown function DUF1078 domain protein [Actinosynnema
           mirum DSM 43827]
          Length = 132

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 2/130 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  S  IA +G++V    +  +++NIAN      T G   ++ + +         GGV V
Sbjct: 3   LFDSIGIAETGVSVHRKWLDAVADNIANVNNATSTAG-PAFQARYVVARSRGED-GGVTV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             +    +     ++P +P+A+A+G V+YP++++  +   +    R Y ANL  + ++  
Sbjct: 61  GGVLSGDAEGKIVYEPTNPLADANGNVRYPDIDLGEQMGQLIMAQRGYQANLAVVDRAKT 120

Query: 124 MMTTTLDLLR 133
                L L R
Sbjct: 121 AYEAALQLGR 130


>gi|119947179|ref|YP_944859.1| flagellar basal-body rod protein FlgC [Psychromonas ingrahamii 37]
 gi|119865783|gb|ABM05260.1| flagellar basal-body rod protein FlgC [Psychromonas ingrahamii 37]
          Length = 142

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 11/139 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
                  A S +  Q+ R+  IS N+ANA +       D ++     F  + +       
Sbjct: 3   FQQIFLTAGSAMTAQTVRLNTISSNLANADSFSGNK-EDVFKPLKPIFATIYNNMNNGSA 61

Query: 58  ----SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
               S  V V  +    S   +  +P +P+ANA G V Y  ++V+ E ADM   +R +  
Sbjct: 62  SNIRSAQVMVADVIATDSLTQQRHEPENPLANAEGNVFYSGIDVVSEMADMMSASRSFEM 121

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N++ +  +  M  + + +L
Sbjct: 122 NVEVLNNAKSMQQSLISVL 140


>gi|188583283|ref|YP_001926728.1| hypothetical protein Mpop_4075 [Methylobacterium populi BJ001]
 gi|179346781|gb|ACB82193.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium populi BJ001]
          Length = 113

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/112 (41%), Positives = 63/112 (56%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M++  ENIANAR+T   P  +PYRRK   FE +   +      +I  D++ F     PGH
Sbjct: 1   MRVSVENIANARSTASAPDGEPYRRKIAVFEPITGNTEEAPAIRIVRDKTEFPTVHSPGH 60

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P A+A G +K PNV   VE +++R   R Y ANL+TI    D+   TL LL+
Sbjct: 61  PAADAGGNLKLPNVRPTVEMSELRSAMRAYEANLRTIATFDDLKGKTLALLK 112


>gi|330501135|ref|YP_004378004.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
 gi|328915421|gb|AEB56252.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
          Length = 142

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 11/137 (8%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--------- 56
           +   IA S +  Q+ R+  ++ N+A    +      D Y+ +   F  V +         
Sbjct: 5   SIYRIAGSSMNAQTVRLNTVASNLA-NADSAAASAEDVYQARKPVFAAVYNNDQLTRGVG 63

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
            G   V+V  +       V  ++P +P+A+  G V Y +++ + E  DM    R +  ++
Sbjct: 64  MGGAHVQVLDVVTAGREPVRRYEPDNPLADDKGYVFYADIDQIEEMTDMMSATRSFETSV 123

Query: 116 QTIKQSHDMMTTTLDLL 132
           + + +   M    L L 
Sbjct: 124 EVLNRLKSMQQGLLKLG 140


>gi|146305248|ref|YP_001185713.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina ymp]
 gi|145573449|gb|ABP82981.1| flagellar basal-body rod protein FlgC [Pseudomonas mendocina ymp]
          Length = 142

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 11/137 (8%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--------- 56
           +   IA S +  Q+ R+  ++ N+A    +      D Y+ +   F  V +         
Sbjct: 5   SIYRIAGSSMNAQTVRLNTVASNLA-NADSAAAKAEDVYQARKPVFAAVYNNDELTRGVG 63

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
            G   V+V  +       V  ++P +P+A+  G V Y +++ + E  DM    R +  ++
Sbjct: 64  MGGAHVQVLDVVTAGREPVRRYEPDNPLADDQGYVFYADIDQIEEMTDMMSATRSFETSV 123

Query: 116 QTIKQSHDMMTTTLDLL 132
           + + +   M    L L 
Sbjct: 124 EVLNRLKSMQQGLLKLG 140


>gi|254438373|ref|ZP_05051867.1| flagellar basal-body rod protein FlgC [Octadecabacter antarcticus
           307]
 gi|198253819|gb|EDY78133.1| flagellar basal-body rod protein FlgC [Octadecabacter antarcticus
           307]
          Length = 138

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     IA   +A Q  R+  ++ NIANA     +   + +R     F+        
Sbjct: 1   MSDLKNVFDIAGRSMAAQMVRLNTVASNIANANARAGS-AEETFRPLRPVFKVAFEDGLR 59

Query: 59  ----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                 V V  I       +   +PGHP+A+  G V    V+V  E  DM E +R +  N
Sbjct: 60  DAERSTVDVVDIVSLDRLPLRVLEPGHPLADEEGFVYVAPVDVNEEMVDMLEASRQFQNN 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L+ +     +M  T+++ +
Sbjct: 120 LEVVTTMRTLMLRTVNMGQ 138


>gi|239815254|ref|YP_002944164.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
 gi|239801831|gb|ACS18898.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
          Length = 153

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 22/154 (14%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
           MDY   S  I+  G+ ++  R+ + + N+ANA T     G   Y+   +  E        
Sbjct: 1   MDY-TQSFAISAIGMNIERTRVDVAALNLANANTVQGV-GGTSYQPLRVIAEARSPGGEG 58

Query: 54  -------------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                            + G  + ++    +     ++PGHP+AN SG V Y  V+   E
Sbjct: 59  AAAFGALVSQGLDAADAAQGSPLVRVVPTNAPPRLVYEPGHPLANESGYVAYAAVDTATE 118

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
              M    R Y AN+  +  +  +    LD+  +
Sbjct: 119 MVSMMSATRAYEANVSAMNTARTLALRALDIGSN 152


>gi|117928047|ref|YP_872598.1| hypothetical protein Acel_0839 [Acidothermus cellulolyticus 11B]
 gi|117648510|gb|ABK52612.1| protein of unknown function DUF1078 domain protein [Acidothermus
           cellulolyticus 11B]
          Length = 130

 Score =  127 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 5/134 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHGSG 59
           M  L  +  I+ + L V    M  I++N++NA      PG  P +  + +  +      G
Sbjct: 1   MTQLFDTIGISGTALTVNRKWMDAIADNVSNANDV--VPGDQPVFAPRYVQVQAAP--GG 56

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV V  I    S  +E +DP +P A+A G V++ +V++  +   M    R Y ANL  + 
Sbjct: 57  GVEVVAIRYGSSAGIESYDPTNPQADARGYVRHADVDMTSQMTQMIMAQRSYEANLAIMT 116

Query: 120 QSHDMMTTTLDLLR 133
           ++ D     L L +
Sbjct: 117 RATDAYKQALQLGK 130


>gi|149202210|ref|ZP_01879183.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
 gi|149144308|gb|EDM32339.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
          Length = 138

 Score =  126 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           +     +A+S ++ Q  R+  ++ N+ANA+    T   + YR     FE +     G   
Sbjct: 3   IKNIFDVASSAMSAQMVRLNTVASNMANAQAVSTTK-EEAYRPLRPVFETIYADQTGQSG 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                V  +       V  + P HP+A+  G V    VN   E  +M E +R Y   L+T
Sbjct: 62  LSTTHVTDVVQLDREPVRAYRPDHPMADEEGFVYESVVNPDEEMVEMVEASRQYQNVLET 121

Query: 118 IKQSHDMMTTTLDLLR 133
           +     +M  T+ + +
Sbjct: 122 VSTLRTLMARTVMMGQ 137


>gi|325274802|ref|ZP_08140830.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51]
 gi|324100070|gb|EGB97888.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51]
          Length = 87

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 33/83 (39%), Positives = 44/83 (53%)

Query: 51  FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
           FE+      GV+VK I  DQS     ++P HP AN  G V YPNVNV+ E ADM   +R 
Sbjct: 5   FEDQGEAGQGVQVKGIVEDQSNLEARYEPNHPAANKDGYVYYPNVNVVEEMADMISASRA 64

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           +  N + +  +  MM   L L +
Sbjct: 65  FQTNAELMNTAKSMMQKVLTLGQ 87


>gi|170747377|ref|YP_001753637.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653899|gb|ACB22954.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
          Length = 136

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 46/119 (38%), Positives = 63/119 (52%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           G  VQS R++ ISEN+ANA +   TPG  PY RK   F  V   S    V +I  D + F
Sbjct: 17  GRQVQSGRIRAISENLANADSVPTTPGGAPYARKIAVFAPVAADSPRDPVGRIARDTTGF 76

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              +DP  P A+ SG V+ PNVN  VE+AD++   R Y  +L        +   T++L+
Sbjct: 77  RTRYDPTSPGADPSGYVRLPNVNSAVESADLQRVVRNYELSLSASASIKTLAQATINLI 135


>gi|68164548|gb|AAY87277.1| predicted flagellar proximal rod protein [uncultured bacterium
           BAC17H8]
          Length = 138

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 55/139 (39%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  +     +A+  ++ Q  R+  I+ N+ANA     +     YR     F+        
Sbjct: 1   MAGIDNIFDVASRSMSAQLVRLNTIASNLANAGNISGSED-QAYRAMKPIFKTTYAANVK 59

Query: 56  -HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
             G     V  I   +      + P HP+++  G V    VNV  E  +M E  R Y  N
Sbjct: 60  DSGISTTEVAGITTSERRPERIYMPNHPLSDQDGFVYAAAVNVEEEFVEMLEAKRQYQNN 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ +     +M  T+++ +
Sbjct: 120 VEVVTTLRALMMRTINMGK 138


>gi|171321209|ref|ZP_02910179.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
 gi|171093519|gb|EDT38689.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
          Length = 149

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 18/144 (12%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS--------FEEVMHG 57
               IA SGL V+  R+++I+ N ANA      PG++PYR   +         F E +  
Sbjct: 4   TIFAIARSGLDVERQRLELIARNFANAGA-STAPGAEPYRPLRLVSGAQLEPAFPEALRR 62

Query: 58  SGG-------VRVKKIGVD--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
           + G       +  + IG+D   +      D  HP A+A G+V+YP ++   E A + +T 
Sbjct: 63  APGGISTDRPLGTRAIGIDALDTPPRVMRDTAHPHADAQGLVRYPGLDHAAEMALLVQTL 122

Query: 109 RLYMANLQTIKQSHDMMTTTLDLL 132
           R Y AN+     +  M    LD+ 
Sbjct: 123 RTYEANVVMFNAARSMYLRALDIG 146


>gi|268316361|ref|YP_003290080.1| flagellar basal-body rod protein FlgC [Rhodothermus marinus DSM
           4252]
 gi|262333895|gb|ACY47692.1| flagellar basal-body rod protein FlgC [Rhodothermus marinus DSM
           4252]
          Length = 166

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/161 (29%), Positives = 67/161 (41%), Gaps = 34/161 (21%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------FEE 53
           + +    A  GL  Q   M   +ENIANA TT    G  PY  K             F E
Sbjct: 7   IFSFFRTAARGLEAQRMAMSAATENIANAATTRTDEG-TPYAIKRAVHTNPEVRNRRFYE 65

Query: 54  VMHGSGGV-RVKKIGVDQST----------------------FVEEFDPGHPVANASGIV 90
           ++       R +      S                          E+DP HP A+A+G V
Sbjct: 66  LLSRLRTAPRTQDPRHSSSPSLLTRLPEAELGPETTIAETLRLRYEYDPTHPHADANGYV 125

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            YP+VNV+ E A +   NR+Y ANL TI+ + +++  TL++
Sbjct: 126 AYPDVNVVEEMAHLISANRIYEANLSTIQAAKEIVKRTLEI 166


>gi|294084420|ref|YP_003551178.1| flagellar basal-body rod protein FlgC [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663993|gb|ADE39094.1| flagellar basal-body rod protein FlgC [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 138

 Score =  121 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  +     I+   +A Q  R+  I+ N+ANA     +   + YR     FE        
Sbjct: 1   MADIKNVFDISGRAMAAQMVRLNTIASNLANAGNLASSED-EAYRSMKPVFETRFADNVN 59

Query: 56  -HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
             G    +V  +          + P HP ++A G V    VNV  E  +M E +R Y  N
Sbjct: 60  DSGMSTTQVVGVTKLSRKPERIYMPDHPKSDAKGFVYSAAVNVEEEFVEMLEASRQYQNN 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ +     +M  T+++ +
Sbjct: 120 IEVVTTLRALMMRTINMGK 138


>gi|326386928|ref|ZP_08208542.1| flagellar cell-proximal portion protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208608|gb|EGD59411.1| flagellar cell-proximal portion protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 140

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 4/130 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---V 61
           +    +    ++ Q  RM   + N+ANA T         YR     F  V+  S G   V
Sbjct: 9   LTLFGLTGQAMSAQLVRMNTAASNLANAGTVASNAQG-AYRPLKAVFATVLDRSTGLASV 67

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V+ +    +T V   +P HP+A+A+G V    V+   E  +M E+ R Y   ++ ++  
Sbjct: 68  KVQGVYQSGATPVRTHNPDHPLADANGDVWSSPVDENAEMVEMTESARQYQNVVEAMQTG 127

Query: 122 HDMMTTTLDL 131
             +M  TL +
Sbjct: 128 KQLMLDTLRM 137


>gi|126462486|ref|YP_001043600.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104150|gb|ABN76828.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17029]
          Length = 138

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  + +   +    L+ Q  RM  ++ N+ANA T  D      +R     FE     + G
Sbjct: 1   MSGIDSVFDVGARALSAQMVRMNTVASNLANAGTVSDK-AETAFRPLRPVFETSYADAVG 59

Query: 61  ------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                   V  +          + P HP A+  G V    V+V  E  +M E +R Y   
Sbjct: 60  RTGLSTTDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNT 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L+ +     +M  T  + +
Sbjct: 120 LEAVSTLRSLMARTASMGQ 138


>gi|254499115|ref|ZP_05111805.1| flagellar basal-body rod protein FlgC [Legionella drancourtii
           LLAP12]
 gi|254351654|gb|EET10499.1| flagellar basal-body rod protein FlgC [Legionella drancourtii
           LLAP12]
          Length = 140

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 6/129 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI----SFEEVMHGSG--GVRV 63
           IA+ G+  +  R+ +++ NIAN  +     GS     + +    SF E++      G+  
Sbjct: 9   IASQGMNAEKLRVDVVANNIANQHSLQKADGSLFQASQVVTTAKSFAELVDKPQEMGIDS 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            ++  +     + + PGHP A+  G V YP V+ + E   +   +R Y AN++ I  +H 
Sbjct: 69  VEVVPENLPPSKVYQPGHPAADKQGYVNYPGVSTIDEMTTLLRASRAYEANIKIINSAHS 128

Query: 124 MMTTTLDLL 132
           +    L + 
Sbjct: 129 LYLQALSIG 137


>gi|77463654|ref|YP_353158.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
           2.4.1]
 gi|77388072|gb|ABA79257.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
           2.4.1]
          Length = 138

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M+ + +   +    L+ Q  RM  ++ N+ANA T  D      +R     FE     + G
Sbjct: 1   MNGIDSVFDVGARALSAQMVRMNTVASNLANAGTVSDK-AETAFRPLRPVFETSYADAVG 59

Query: 61  ------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                   V  +          + P HP A+  G V    V+V  E  +M E +R Y   
Sbjct: 60  RTGLSTTDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNT 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L+ +     +M  T  + +
Sbjct: 120 LEAVSTLRSLMARTASMGQ 138


>gi|146277710|ref|YP_001167869.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555951|gb|ABP70564.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17025]
          Length = 138

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +     +    L+ Q  RM  ++ N+ANA T  DT     +R     FE     + G
Sbjct: 1   MSGINNIFDVGARALSAQMVRMNTVASNLANAGTVSDT-AETAFRPLRPVFETTYADAVG 59

Query: 61  ------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                   V  +          + P HP A+A G V    V+V  E  +M E +R Y   
Sbjct: 60  KSGLSTTDVAAVVSLDREPARTYRPDHPQADAEGYVWEAPVSVDEEMVEMMEASRQYQNT 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L+ +     +M  T  + +
Sbjct: 120 LEAVSTLRSLMARTASMGQ 138


>gi|221639497|ref|YP_002525759.1| Flagellar proximal rod protein FlgC [Rhodobacter sphaeroides KD131]
 gi|221160278|gb|ACM01258.1| Flagellar proximal rod protein FlgC [Rhodobacter sphaeroides KD131]
          Length = 139

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  + +   +    L+ Q  RM  ++ N+ANA T  D      +R     FE     + G
Sbjct: 2   MSGIDSVFDVGARALSAQMVRMNTVASNLANAGTVSDK-AETAFRPLRPVFETSYADAVG 60

Query: 61  ------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                   V  +          + P HP A+  G V    V+V  E  +M E +R Y   
Sbjct: 61  RTGLSTTDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNT 120

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L+ +     +M  T  + +
Sbjct: 121 LEAVSTLRSLMARTASMGQ 139


>gi|83815671|ref|YP_446718.1| flagellar basal-body rod protein FlgC [Salinibacter ruber DSM
           13855]
 gi|294508653|ref|YP_003572712.1| flagellar basal-body rod protein flgC [Salinibacter ruber M8]
 gi|83757065|gb|ABC45178.1| flagellar basal-body rod protein FlgC [Salinibacter ruber DSM
           13855]
 gi|294344982|emb|CBH25760.1| Flagellar basal-body rod protein flgC [Salinibacter ruber M8]
          Length = 166

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 34/163 (20%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE------EVM 55
           +  + +   A  GL  Q  ++   +EN+ANA +T  T   DP+R K    E      E +
Sbjct: 5   NQFLPAMKTAARGLEAQRRKLGAATENLANA-STSRTEDGDPFRIKRAVQEVDNADYERL 63

Query: 56  HGSG--------GVRVKKIGVDQSTFVEE-------------------FDPGHPVANASG 88
           +  G            + +        +                    +DP HP A+  G
Sbjct: 64  NRGGLDPQLELRSTNARHLREASLPPEQATGNLGPETEIEEIEKERLEYDPSHPHADEEG 123

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V YP+VNV  E A M   NR+Y ANL  ++ +  M   T ++
Sbjct: 124 YVHYPDVNVAQEMARMTSANRVYEANLSAVEATKSMAQRTFEI 166


>gi|332558510|ref|ZP_08412832.1| FlgC [Rhodobacter sphaeroides WS8N]
 gi|332276222|gb|EGJ21537.1| FlgC [Rhodobacter sphaeroides WS8N]
          Length = 138

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  + +  ++    L+ Q  RM  ++ N+ANA T  D      +R     FE     + G
Sbjct: 1   MSGIDSVFNVGARALSAQMVRMNTVASNLANAGTVSDR-AETAFRPLRPVFETSYADAVG 59

Query: 61  ------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                   V  +          + P HP A+  G V    V+V  E  +M E +R Y   
Sbjct: 60  RTGLSTTDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNT 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L+ +     +M  T  + +
Sbjct: 120 LEAVSTLRSLMARTASMGQ 138


>gi|299066533|emb|CBJ37723.1| putative Flagellar basal-body rod protein FlgC [Ralstonia
           solanacearum CMR15]
          Length = 157

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 26/156 (16%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           MDY   +  I+ +G+AV+  R+ + S N+ANA T   T G++ Y+   +    +  G+  
Sbjct: 1   MDY-ARAFAISAAGMAVERTRVDVASLNLANANTVLTTDGAN-YQPLRVVARAMPMGANQ 58

Query: 60  -----------------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                                   + + +     +     ++PGHP AN  G V Y  V+
Sbjct: 59  EAGWVSFSDRVEQGLDTPERSSLSLPLVQTEPTGAQPRMVYEPGHPFANDKGFVAYQGVD 118

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              E   +    R Y AN+  +  +  +    LD+ 
Sbjct: 119 TATEMVTLMSALRAYEANVVAMNTARTLSLKALDIG 154


>gi|6502601|gb|AAF14368.1|AF133240_2 flagellar proximal rod protein FlgC [Rhodobacter sphaeroides]
          Length = 139

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  + +  ++    L+ Q  RM  ++ N+ANA T  D      +R     FE     + G
Sbjct: 2   MSGIDSVFNVGARALSAQMVRMNTVASNLANAGTVSDR-AETAFRPLRPVFETSYADAVG 60

Query: 61  ------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                   V  +          + P HP A+  G V    V+V  E  +M E +R Y   
Sbjct: 61  RTGLSTTDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNT 120

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L+ +     +M  T  + +
Sbjct: 121 LEAVSTLRSLMARTASMGQ 139


>gi|119715008|ref|YP_921973.1| flagellar basal-body rod protein [Nocardioides sp. JS614]
 gi|119535669|gb|ABL80286.1| flagellar basal-body rod protein [Nocardioides sp. JS614]
          Length = 130

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 3/129 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             +  IA S + V    +  ++ NIAN  T   T   + ++ + +     +   GGV V 
Sbjct: 4   FDTLTIAGSSMGVHQTWLDTLASNIANVNTVTPTS-QNAFQAQMLIVRSAV--GGGVEVA 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +           DPG+P+A+A G V+ P++++  +   +    R + A++Q  KQ+ + 
Sbjct: 61  GLAQSDPQGRLVSDPGNPMADADGYVRAPDMDMSTQMTQLVMAQRGFQASVQVTKQAQET 120

Query: 125 MTTTLDLLR 133
            T  L + R
Sbjct: 121 YTAALQIGR 129


>gi|85710162|ref|ZP_01041227.1| flagellar cell-proximal portion protein [Erythrobacter sp. NAP1]
 gi|85688872|gb|EAQ28876.1| flagellar cell-proximal portion protein [Erythrobacter sp. NAP1]
          Length = 125

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 4/120 (3%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---VRVKKIGVDQ 70
            ++ Q  RM + + N+ANA +   +  ++ YR     F   +  + G   V+   I    
Sbjct: 5   AMSAQLVRMNVATSNLANAGSVASSE-AEAYRPMRAVFRAELDRASGLSSVQTAGITQSN 63

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               + +DP HP+A+ +G V    V+   E  ++ ++ R Y   +Q ++ +  +M  TL 
Sbjct: 64  EAPSKRYDPSHPLADETGHVFEAPVDESAEMVEIMDSARQYQNMVQALQTAKQLMLETLR 123


>gi|149184205|ref|ZP_01862523.1| flagellar basal-body rod protein FlgC [Erythrobacter sp. SD-21]
 gi|148831525|gb|EDL49958.1| flagellar basal-body rod protein FlgC [Erythrobacter sp. SD-21]
          Length = 113

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 4/113 (3%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---VRVKKIGVDQSTFVEEFD 78
           M   + N+ANA +   +  ++ YR     FE+ +  + G   VRV  +  + +  +   D
Sbjct: 1   MNTAASNLANAGSVAGSE-AEAYRPMRTVFEQELDRASGLSSVRVGGVVREDTAPIRRHD 59

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           PGHP+A+ +G V    V+   E  +M E +R Y   ++ +  +  +M  T+ +
Sbjct: 60  PGHPLADENGDVWEAPVDENAEMVEMLEASRQYRNMVEALSTAKQLMLETMRM 112


>gi|50954402|ref|YP_061690.1| flagellar basal-body rod protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50950884|gb|AAT88585.1| flagellar basal-body rod protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 132

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 2/133 (1%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M   + +  IA +G+ +    +  I +N+AN   T  T  ++P  ++     +    SGG
Sbjct: 1   MTVQLDAIGIAGTGMNLNQKWLDAIGDNLANIDDT--TNRANPAFQERFVLAQADSDSGG 58

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V       +     +    P A+A G V+   +++ V+  ++    R Y AN  T+  
Sbjct: 59  VAVAGTPFGSAAGRLVYSLRDPNADAQGYVRGTGIDLSVQMTNLIMAQRAYQANANTVSS 118

Query: 121 SHDMMTTTLDLLR 133
           +  M  + L + +
Sbjct: 119 ARYMYQSALQIGQ 131


>gi|91791420|ref|YP_561071.1| putative flagellar basal body rod protein FlgC [Shewanella
           denitrificans OS217]
 gi|91713422|gb|ABE53348.1| putative flagellar basal body rod protein FlgC [Shewanella
           denitrificans OS217]
          Length = 127

 Score =  106 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 13/128 (10%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----SGGVRVKK 65
           +A +G+A +  R++  S NIA A     T            F   + G     G V++  
Sbjct: 9   VAQTGMAFERNRIEAASLNIARANVVSSTAAQV-----EPLFMAALSGEELQPGNVKLTG 63

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
               ++     + P HP+A+  G +  P++++  E   +    R Y AN++      +M 
Sbjct: 64  YMKSKA----IYQPAHPLADKQGFIYMPDIDLAHEMVTLSSAKRAYEANIKVYNSYKEMS 119

Query: 126 TTTLDLLR 133
              L++ +
Sbjct: 120 AKALEIGK 127


>gi|39933177|ref|NP_945453.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris CGA009]
 gi|192288534|ref|YP_001989139.1| hypothetical protein Rpal_0101 [Rhodopseudomonas palustris TIE-1]
 gi|39652802|emb|CAE25541.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris CGA009]
 gi|192282283|gb|ACE98663.1| protein of unknown function DUF1078 domain protein
           [Rhodopseudomonas palustris TIE-1]
          Length = 136

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 8/134 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-------PYRRKTISFEEVMH 56
           + A A IA SGL   + R+++ + NIAN R+TG  PG+D       P   K +   +   
Sbjct: 1   MSAIASIAVSGLNAATRRLEVSASNIANQRSTGALPGADGTVPPGAPQAYKPLQVNQTDT 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +GG +        +T V   DP  P A+A G+V  PNV++  E          Y ANL 
Sbjct: 61  PTGGTQTSLATTSPAT-VPVSDPQAPFADADGMVAAPNVDLAQEFIGQMVAKYSYTANLA 119

Query: 117 TIKQSHDMMTTTLD 130
           +++   DM    LD
Sbjct: 120 SLQADRDMTKALLD 133


>gi|316931494|ref|YP_004106476.1| hypothetical protein Rpdx1_0099 [Rhodopseudomonas palustris DX-1]
 gi|315599208|gb|ADU41743.1| protein of unknown function DUF1078 domain protein
           [Rhodopseudomonas palustris DX-1]
          Length = 136

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 8/134 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPG-------SDPYRRKTISFEEVMH 56
           + A A IA SGL   + R+++ + NIAN R+TG  PG         P   K +   +   
Sbjct: 1   MSAIASIAVSGLNAATRRLEVSASNIANQRSTGTLPGANGTVPAGAPQAYKPLQVNQTDT 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +GG +        +T V   DP  P A+A G+V  PNV++  E          Y ANL 
Sbjct: 61  STGGTQTSLATTSPAT-VPVSDPQAPFADADGMVAAPNVDLAQEFIGQMVAKYSYAANLA 119

Query: 117 TIKQSHDMMTTTLD 130
           +++   DM    LD
Sbjct: 120 SLQADRDMTKALLD 133


>gi|239907806|ref|YP_002954547.1| putative flagellar basal-body rod protein [Desulfovibrio magneticus
           RS-1]
 gi|239797672|dbj|BAH76661.1| putative flagellar basal-body rod protein [Desulfovibrio magneticus
           RS-1]
          Length = 128

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 14/134 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +   A S L+  S  M + + N+AN  T G       Y+ +    E    G  GVRV
Sbjct: 1   MTDAISAAQSALSAFSTSMAVTANNVANVNTDG-------YKSQDARLETGPDGQ-GVRV 52

Query: 64  KKIGVDQST------FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             I  D S        V  ++       ++G+V+  NV++  +T DM +T+R + AN+ T
Sbjct: 53  SDIVRDASPGGYQPESVSAYNQAGVYEPSAGLVETSNVDLARQTVDMIQTSRAFEANVVT 112

Query: 118 IKQSHDMMTTTLDL 131
           I+    M+ T LD+
Sbjct: 113 IRSQDQMLGTLLDM 126


>gi|322806995|emb|CBZ04565.1| flagellar basal-body rod protein FlgC [Clostridium botulinum H04402
           065]
          Length = 67

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 34/66 (51%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            D S   + +DP HP A+  G V  PNVNVL E ADM  + R Y AN+  +     M   
Sbjct: 2   EDPSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGK 61

Query: 128 TLDLLR 133
            L++ +
Sbjct: 62  ALEIGK 67


>gi|269965426|ref|ZP_06179545.1| Flagellar basal-body rod protein flgC [Vibrio alginolyticus 40B]
 gi|269829905|gb|EEZ84135.1| Flagellar basal-body rod protein flgC [Vibrio alginolyticus 40B]
          Length = 70

 Score =  103 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 35/69 (50%)

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S  M
Sbjct: 2   GIVESDKPLSAEYNPDHPLANEEGYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQM 61

Query: 125 MTTTLDLLR 133
           +  TL + +
Sbjct: 62  LLRTLQMGQ 70


>gi|262166284|ref|ZP_06034021.1| flagellar basal-body rod protein FlgC [Vibrio mimicus VM223]
 gi|262026000|gb|EEY44668.1| flagellar basal-body rod protein FlgC [Vibrio mimicus VM223]
          Length = 71

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 36/69 (52%)

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I       V EF+P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S  M
Sbjct: 3   GIVESDKPLVAEFNPEHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQM 62

Query: 125 MTTTLDLLR 133
           +  TL + +
Sbjct: 63  LLRTLQMGQ 71


>gi|207110317|ref|ZP_03244479.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 113

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/113 (30%), Positives = 45/113 (39%), Gaps = 31/113 (27%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+           
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKAFDFNEILNQK 60

Query: 59  -------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANA 86
                                      V V KI  D S  + ++DP HP ANA
Sbjct: 61  IAQNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANA 113


>gi|256370953|ref|YP_003108777.1| protein of unknown function DUF1078 domain protein [Acidimicrobium
           ferrooxidans DSM 10331]
 gi|256007537|gb|ACU53104.1| protein of unknown function DUF1078 domain protein [Acidimicrobium
           ferrooxidans DSM 10331]
          Length = 144

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 16/142 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHG----- 57
           L  +  +A +G+  +   +  I+ N+AN      T    P Y+ + +  + V        
Sbjct: 3   LFPAIDVAATGVTTEQTWLDTIASNVANVNDQSATN--QPIYQEQEVLVQPVETSPVTGV 60

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV+V  I       V  +DP   +ANA G VK P +++  +  ++     
Sbjct: 61  ADTTTTPVGSGVQVDAIVTPLPNGVLSYDPTSTLANAQGYVKTPGISLAQQLGNLVNAQT 120

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            Y AN+  I Q+       L +
Sbjct: 121 SYQANVAVINQAKTAYEAILGI 142


>gi|288960379|ref|YP_003450719.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288912687|dbj|BAI74175.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 134

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 12/135 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD--------PYRRKTISFEEVM 55
           ++ S  IA  GL  Q+ R+   + N+AN R+T   P  D         Y+   +      
Sbjct: 1   MVGSIGIALGGLTAQTRRLDASASNVANVRSTSAVPAKDGSTDGKRAAYQPLAV---AQT 57

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
            G+ G R     +  + +++E+ P    AN SG+V  PNV++  E       NR Y AN+
Sbjct: 58  DGNPGTRTTFTPITPA-YLQEYAPDDSAANGSGMVAAPNVDLATERITQMAANRAYGANV 116

Query: 116 QTIKQSHDMMTTTLD 130
             ++   +MM + LD
Sbjct: 117 AVVRTQDEMMKSLLD 131


>gi|207093458|ref|ZP_03241245.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 72

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/70 (41%), Positives = 41/70 (58%)

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            KI  D S  + ++DP HP ANA G V YPNVN +VE AD+ E  R Y AN+   + + +
Sbjct: 2   DKIVRDDSEPLMKYDPSHPDANAQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKN 61

Query: 124 MMTTTLDLLR 133
           M    + +L+
Sbjct: 62  MAQNAIGMLQ 71


>gi|313901523|ref|ZP_07834970.1| flagellar basal-body rod protein FlgC [Thermaerobacter subterraneus
           DSM 13965]
 gi|313468218|gb|EFR63685.1| flagellar basal-body rod protein FlgC [Thermaerobacter subterraneus
           DSM 13965]
          Length = 188

 Score = 97.3 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 33/72 (45%)

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V  +  D S     +DP HP A   G V YPNV+ L E  ++    R Y AN+     +
Sbjct: 116 QVAAVVGDPSPPRLVYDPAHPDAGPDGYVAYPNVDPLAEMVNLLAATRAYEANVAVFAAA 175

Query: 122 HDMMTTTLDLLR 133
             +    LD+ R
Sbjct: 176 RTLALRALDIGR 187



 Score = 85.0 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          + ++  IA SG+  Q  R+ +I+ N+AN  +T  TP   PYRR    FEE
Sbjct: 5  MFSTFDIAASGMTAQRLRLDLIASNLANVDSTR-TPQGGPYRRLVPVFEE 53


>gi|86747251|ref|YP_483747.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris HaA2]
 gi|86570279|gb|ABD04836.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris HaA2]
          Length = 136

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 8/134 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD-------TPGSDPYRRKTISFEEVMH 56
           + + + IA SGL   + R+++ + N+AN ++TG         P   P     +   +   
Sbjct: 1   MSSISAIAVSGLKAATRRLEVSASNVANQQSTGALPTANGAVPAGAPQAYTPLQVTQTAV 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              G +         T     DP  P A+ SG+V  PNV++  E          Y ANL 
Sbjct: 61  PGSGTQTSVTPTTPGTIAIA-DPQAPFADESGMVAAPNVDLAQELIGQMVAKYSYTANLA 119

Query: 117 TIKQSHDMMTTTLD 130
           T+K   DM    LD
Sbjct: 120 TLKADRDMTKALLD 133


>gi|209966304|ref|YP_002299219.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
 gi|209959770|gb|ACJ00407.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
          Length = 146

 Score = 96.2 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 18/145 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD--------------PYRRKTI 49
           ++    IA SG+  Q+ R+   ++NIANAR+TG  PGS               PY     
Sbjct: 1   MVDPIAIAGSGMTAQARRLAAGADNIANARSTGALPGSAAGAPAGATGADTPRPY-APVS 59

Query: 50  SFEEVMHGSGGVRV---KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           S +  + G  G  +         Q  FV EF P  P A+A G+V  PNV+++ ET  M +
Sbjct: 60  SGQTAVTGPDGQGMGTRAVFRATQPAFVPEFSPDSPFADADGMVAAPNVDLVGETVAMTQ 119

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
               Y ANL+  + + ++    L+L
Sbjct: 120 GLDAYKANLRVFEAADELTREALNL 144


>gi|91975157|ref|YP_567816.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris BisB5]
 gi|91681613|gb|ABE37915.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris BisB5]
          Length = 136

 Score = 93.8 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 8/134 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD-------TPGSDPYRRKTISFEEVMH 56
           + + A IA SG+   + R+++ + N+AN ++TG         P   P   + +   +   
Sbjct: 1   MTSIASIAVSGMNAATRRLEVSASNVANQQSTGALPAANGAVPAGAPQAYRPLQVNQTAV 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GG +       Q   V   DP  P AN  G V  PNV++  E          Y ANL 
Sbjct: 61  AGGGTQTTVSATSQGA-VAISDPQAPFANQDGQVAAPNVDLAQEFIGQLVARYSYTANLA 119

Query: 117 TIKQSHDMMTTTLD 130
           ++K   DM    LD
Sbjct: 120 SLKADRDMSKALLD 133


>gi|296282281|ref|ZP_06860279.1| flagellar basal-body rod protein FlgC [Citromicrobium bathyomarinum
           JL354]
          Length = 130

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 4/121 (3%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---VRVKKIGVDQ 70
            ++ Q  RM   + N+ANA +   +   + YR     F E +    G   VRV ++    
Sbjct: 10  AMSAQMVRMNAAASNLANAGSVAGSAD-EAYRPIRTVFAEELDKQSGLSSVRVDRVVRSD 68

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  V   DPGHP+A+ +G V    V+   E  +M E +R Y   ++ +  +  +M  T+ 
Sbjct: 69  TAPVRRHDPGHPLADENGDVWEAPVDENAEMIEMLEASRQYSNMVEAMSTAKQLMLETMR 128

Query: 131 L 131
           +
Sbjct: 129 M 129


>gi|27378285|ref|NP_769814.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351432|dbj|BAC48439.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 149

 Score = 91.1 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 20/147 (13%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----------------PYRRK 47
           ++   IA SGL+  S R+ + + NIAN  TTG  P S                  P    
Sbjct: 1   MSIFSIATSGLSAASLRVSVAASNIANISTTGPLPASGGSSTSAGAGSSGIGPTFPAAYV 60

Query: 48  TISFEEVMHGSG---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
            +  ++V   SG   G  V  +     +++ + DP  P AN  G+V  PNV++  E  ++
Sbjct: 61  PLRVDQVSQSSGSTPGGSVATVSAVSPSYIAQSDPSAPFANEDGLVAAPNVDLAGEFVEL 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
                 ++AN + I+   +   + LD+
Sbjct: 121 VTAKYSFIANAKVIQAYAETTESLLDI 147


>gi|163794627|ref|ZP_02188597.1| putative flagellar basal-body rod protein flgC [alpha
           proteobacterium BAL199]
 gi|159179900|gb|EDP64425.1| putative flagellar basal-body rod protein flgC [alpha
           proteobacterium BAL199]
          Length = 138

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 8/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMH--- 56
           +  +   A SG+     R    + N+AN R+    T D P +D   R        +    
Sbjct: 3   ISNALSSALSGVQAAERRFGNSANNVANLRSQAAPTVDGPATDADGRTLFRAARSVDQTT 62

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +GGVR  ++ VD S  ++ ++P    A+A G+V  PNV+++ ETAD     R   ANL 
Sbjct: 63  ATGGVRSSQLLVDPS-SIQGYEPSAADADADGLVHRPNVDLVRETADQISGQRQLEANLA 121

Query: 117 TIKQSHDMMTTTLDL 131
           TI+ + +++  TLD+
Sbjct: 122 TIRAADELLQATLDI 136


>gi|330809235|ref|YP_004353697.1| flagellar basal-body rod protein flgC [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327377343|gb|AEA68693.1| Putative Flagellar basal-body rod protein flgC [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 131

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L   + I    +A + +R ++ S N+A A          P    ++S      G  G++
Sbjct: 2   PLDNISEIVRGSMAYERSRAEVASYNLAIANVAIGPGERSPL--LSVSPPTSFAGQLGLQ 59

Query: 63  VKKI-GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             ++    +S      +P HP+A+ +G+V YPN+    E A +    R Y AN+++    
Sbjct: 60  QPRVHAQARSDSRLVHEPSHPMADQNGMVHYPNIEAAREMATLVSATRAYEANIRSYNSL 119

Query: 122 HDMMTTTLDLLR 133
            +M     ++ +
Sbjct: 120 REMTLKAFEIGK 131


>gi|148252489|ref|YP_001237074.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. BTAi1]
 gi|146404662|gb|ABQ33168.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. BTAi1]
          Length = 125

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 8/124 (6%)

Query: 15  LAVQSARMQIISENIANARTTGDTPG-------SDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +   + R+++ + N+ANAR+TG  P          P     +   +     GG +     
Sbjct: 1   MNAATRRLEVSASNVANARSTGALPDANGKLPAGAPKAYDPLELVQSDVAGGGTQTTITR 60

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
             Q T    ++P  P AN  G+V  PNV++  E          + AN + +K S +M   
Sbjct: 61  ASQGTSAS-YEPSAPFANKDGLVAAPNVDLAQEMISQLVAKYSFAANARVLKASDEMSRI 119

Query: 128 TLDL 131
            +D+
Sbjct: 120 VVDM 123


>gi|146343395|ref|YP_001208443.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. ORS278]
 gi|146196201|emb|CAL80228.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. ORS278]
          Length = 136

 Score = 88.1 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 12/130 (9%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSD---------PYRRKTISFEEVMHGSGGV 61
           A SG+   + R+++ + N+ANAR+TG  P ++          Y    +   +V  G    
Sbjct: 8   AVSGMNAAARRLEVSASNVANARSTGALPDTNGNVPAGAPKAYDPLELVQSDVAGGGTQT 67

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            + K G   S     +DP  P AN  G+V  P V++  E          + AN + +K S
Sbjct: 68  TIAKAGNGTSAS---YDPTAPFANKEGLVAAPRVDLAQEMISQLVAKYSFAANARVLKAS 124

Query: 122 HDMMTTTLDL 131
            +M    +D+
Sbjct: 125 DEMSRIVIDM 134


>gi|313650476|gb|EFS14883.1| flagellar basal-body rod protein flgC [Shigella flexneri 2a str.
          2457T]
 gi|332758232|gb|EGJ88555.1| flagellar basal-body rod protein flgC [Shigella flexneri 4343-70]
 gi|332759647|gb|EGJ89952.1| flagellar basal-body rod protein flgC [Shigella flexneri 2747-71]
 gi|332761418|gb|EGJ91702.1| flagellar basal-body rod protein flgC [Shigella flexneri K-671]
 gi|332767680|gb|EGJ97873.1| flagella basal body rod family protein [Shigella flexneri
          2930-71]
 gi|333004882|gb|EGK24402.1| flagellar basal-body rod protein flgC [Shigella flexneri VA-6]
 gi|333005639|gb|EGK25157.1| flagellar basal-body rod protein flgC [Shigella flexneri K-218]
 gi|333019455|gb|EGK38738.1| flagellar basal-body rod protein flgC [Shigella flexneri K-304]
 gi|333019765|gb|EGK39037.1| flagellar basal-body rod protein flgC [Shigella flexneri K-227]
          Length = 90

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGSGG 60
          L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F+        +GG
Sbjct: 3  LLNIFDIAGSALTAQSQRLNVAASNLANADSV-TGPDGQPYRAKQVVFQVNAAPGAATGG 61

Query: 61 VRVKKI 66
          V+V  +
Sbjct: 62 VKVADV 67


>gi|333008275|gb|EGK27749.1| flagellar basal-body rod protein flgC [Shigella flexneri K-272]
          Length = 90

 Score = 86.1 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHGSGG 60
          L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F         +GG
Sbjct: 3  LLNIFDIAGSALTAQSQRLNVAASNLANADSV-TGPDGQPYRAKQVVFLVNAAPGAATGG 61

Query: 61 VRVKKI 66
          V+V  +
Sbjct: 62 VKVADV 67


>gi|289612744|emb|CBI60033.1| unnamed protein product [Sordaria macrospora]
          Length = 90

 Score = 86.1 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 48  TISFEEVMHGSGG---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
              F   +  + G   V  +++        + +DP +P+A+A G V    V+   E  DM
Sbjct: 2   KPVFRTSLDAASGLATVDAREVVKAGEAPAKRYDPSNPLADAEGNVWEAAVDEPRELVDM 61

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  R Y  N++ +  +  ++T TL L R
Sbjct: 62  LDAARTYQNNVEVMSTAKSLITETLRLGR 90


>gi|303248256|ref|ZP_07334519.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           fructosovorans JJ]
 gi|302490394|gb|EFL50305.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           fructosovorans JJ]
          Length = 128

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 14/134 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +   A S L   S  M + + N+AN  T G       Y+ +         G  G +V
Sbjct: 1   MTDAISAAQSALGAMSTSMAVTANNVANVNTDG-------YKSQDARLSTGPDGQ-GTQV 52

Query: 64  KKIGVDQS------TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             I  D S        V   +          +V+  NV+++ +  +M + +R + AN+  
Sbjct: 53  SSIVEDTSAGALRAETVAAENQAGAYEPQMDMVEMSNVDLVRQNVNMIQDSRAFEANVAV 112

Query: 118 IKQSHDMMTTTLDL 131
           I+ + +M  T LDL
Sbjct: 113 IRTADEMAGTLLDL 126


>gi|207091983|ref|ZP_03239770.1| flagellar basal body rod protein FlgC [Helicobacter pylori
          HPKX_438_AG0C1]
          Length = 89

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
           ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+ 
Sbjct: 2  FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGG-PYRRQEAVFKA 50


>gi|303327773|ref|ZP_07358213.1| putative flagellar basal-body rod protein [Desulfovibrio sp.
           3_1_syn3]
 gi|302862134|gb|EFL85068.1| putative flagellar basal-body rod protein [Desulfovibrio sp.
           3_1_syn3]
          Length = 133

 Score = 80.4 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 50/139 (35%), Gaps = 16/139 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +  S ++  S +   S  M + + N+AN  T G  P    Y            G  G
Sbjct: 1   MSGITGSMNLGASAMNAHSWGMAVTAHNVANVNTAGFAPQHAVY--------ATGPGGRG 52

Query: 61  VRVKKIGVDQS-----TFVEEFDP---GHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
           VR+  +  D             +P     P +  S  V     ++  E   M  T R Y 
Sbjct: 53  VRLDAVLQDSGVAGRLPAEVRNNPAVSTAPASMESDFVNPGGTDLGREMTQMISTQRTYE 112

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN Q ++    M+ T LDL
Sbjct: 113 ANAQVVRTGDAMLGTLLDL 131


>gi|2494522|sp|P70911|FLGC_BORHE RecName: Full=Flagellar basal-body rod protein flgC
 gi|1621621|gb|AAB51474.1| flagellar rod protein FLgC [Borrelia hermsii]
          Length = 59

 Score = 78.8 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          L +S + A++GL  Q  R+ +I+ NIAN  TT  + G   YRR+ + F  
Sbjct: 3  LFSSINTASTGLTAQRLRLDVIANNIANVETTRTSEGGS-YRRQRVIFAP 51


>gi|322806996|emb|CBZ04566.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
          H04402 065]
          Length = 77

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
            +  I+ SGL+ +  RM  I+ NIANA TT  T    PY+RK   F
Sbjct: 5  FDTMRISASGLSAERLRMDTIASNIANATTTR-TENGGPYKRKIAVF 50


>gi|332092901|gb|EGI97969.1| flagellar basal-body rod protein flgC [Shigella dysenteriae
          155-74]
          Length = 49

 Score = 77.3 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          L+    IA S L  QS R+ + + N+ANA +    P   PYR K + F
Sbjct: 3  LLNIFDIAGSALTAQSQRLNVAASNLANADSV-TGPDGQPYRAKQVVF 49


>gi|120601522|ref|YP_965922.1| hypothetical protein Dvul_0472 [Desulfovibrio vulgaris DP4]
 gi|120561751|gb|ABM27495.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris DP4]
          Length = 125

 Score = 75.0 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 13/124 (10%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            L      + + + NIAN  T G       +R     +E    G  GVRV +I    +  
Sbjct: 9   ALDAFGIGLGVTANNIANVNTDG-------FRASQTRYETGPGGE-GVRVGEIRESTTPG 60

Query: 74  VE-----EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                    +    +     +V+  N +   E   M ET R + AN+ +I+   DM    
Sbjct: 61  PLHEGMGIVEREGRMEQQRVLVEGSNTDTAREMVSMMETQRAHEANVASIRAHDDMTGVV 120

Query: 129 LDLL 132
           LD++
Sbjct: 121 LDIM 124


>gi|323697455|ref|ZP_08109367.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           sp. ND132]
 gi|323457387|gb|EGB13252.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans ND132]
          Length = 108

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 19/120 (15%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           S L+  S   ++ + NIAN  T G       +R   +S E    G  GV V  I    + 
Sbjct: 7   SALSALSTVQEVSANNIANMNTDG-------FRAGAVSLESGP-GGQGVEVASITESTA- 57

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                    P A  +G V+  N +V  E  DM  T+R + AN   I+ S +M    LD++
Sbjct: 58  ---------PGAFING-VETSNTDVGREMVDMIVTSRAFEANTTFIRASEEMTGHLLDMI 107


>gi|46581297|ref|YP_012105.1| flagellar basal-body rod protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450718|gb|AAS97365.1| flagellar basal-body rod protein, putative [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|311234961|gb|ADP87815.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris RCH1]
          Length = 125

 Score = 72.7 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 13/124 (10%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            L      + + + NIAN  T G       +R     +E    G  GVR+ +I    +  
Sbjct: 9   ALDAFGIGLGVTANNIANVNTDG-------FRASQTRYETGPGGE-GVRLGEIRESTTPG 60

Query: 74  VE-----EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                    +    +     +V+  N +   E   M ET R + AN+ +I+   DM    
Sbjct: 61  PLHEGMGIVEREGRMEQQRVLVEGSNTDTAREMVSMMETQRAHEANVASIRAHDDMTGVV 120

Query: 129 LDLL 132
           LD++
Sbjct: 121 LDIM 124


>gi|163760754|ref|ZP_02167834.1| probable flagellar basal body rod protein [Hoeflea phototrophica
           DFL-43]
 gi|162282076|gb|EDQ32367.1| probable flagellar basal body rod protein [Hoeflea phototrophica
           DFL-43]
          Length = 112

 Score = 70.7 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 28/129 (21%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SG+A QS RM  I+ N+AN  T    P    Y RKT+  E V    GGVR 
Sbjct: 2   ISSIINTAFSGMAAQSKRMDAIASNVANVDT----PD---YNRKTV--EMVTTAGGGVRA 52

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                             P    +G      V++  E  DM E+   Y ANL  ++   D
Sbjct: 53  V-----------------PREAPAG--SNSGVDLATELMDMAESKMAYEANLAVMETGMD 93

Query: 124 MMTTTLDLL 132
           M    +  L
Sbjct: 94  MWDMLMSAL 102


>gi|218781795|ref|YP_002433113.1| hypothetical protein Dalk_3959 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763179|gb|ACL05645.1| Putative flagellar basal body rod protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 117

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 17/132 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +IA  + + S L     + Q  + N AN  T G       Y++  ++  E  +GS   + 
Sbjct: 1   MIAGINASVSALNAYGRKFQSTANNTANIDTDG-------YKKTRVTMSEAANGSVEAKS 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASG--IVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +K+    S  V E         + G  +V+  NV++  E  +     R Y ANL ++K  
Sbjct: 54  EKV-NSPSPIVSELT-------SEGSVLVEKSNVDLAQEVTNQILAARGYEANLASVKAF 105

Query: 122 HDMMTTTLDLLR 133
            +M+ +TLDL++
Sbjct: 106 DEMLGSTLDLIK 117


>gi|217076897|ref|YP_002334613.1| flagellar basal-body rod protein FlgG [Thermosipho africanus
           TCF52B]
 gi|217036750|gb|ACJ75272.1| flagellar basal-body rod protein FlgG [Thermosipho africanus
           TCF52B]
          Length = 261

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NV+++ E  DM    R Y  N +TI+ + +M+ T   + R
Sbjct: 215 QGYVEKSNVDIVKEMVDMISAMRAYELNSRTIQTADEMLRTASSMKR 261



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I   + A +G+  Q  ++  +S NIAN  T G       Y++    F+++++
Sbjct: 1  MINGLYTAATGMWAQQFKLDTLSNNIANVDTAG-------YKKVKSEFQDLLY 46


>gi|94266975|ref|ZP_01290624.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93452330|gb|EAT02961.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 118

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 12/128 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +++    A SGL     +    + N+AN  T G       Y++  +S  E     GGV  
Sbjct: 1   MVSGIQAALSGLQALQQKNSATAHNVANVNTDG-------YKKVKVSLAETT-PPGGVEA 52

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +   +D +   +  +     A+   +V+  NV++  E  +M  + R + ANL+ ++   +
Sbjct: 53  RAEKID-TPGPQVSEQT---ADGPELVEKSNVDLAEEMPNMMLSRRYFQANLKVVQTEDE 108

Query: 124 MMTTTLDL 131
            +   L++
Sbjct: 109 RLGNLLNI 116


>gi|313650475|gb|EFS14882.1| flagellar basal-body rod protein flgC [Shigella flexneri 2a str.
           2457T]
 gi|332092840|gb|EGI97908.1| flagellar basal-body rod protein flgC [Shigella dysenteriae 155-74]
 gi|332758233|gb|EGJ88556.1| flagellar basal-body rod protein flgC [Shigella flexneri 4343-70]
 gi|332759610|gb|EGJ89915.1| flagellar basal-body rod protein flgC [Shigella flexneri 2747-71]
 gi|332761419|gb|EGJ91703.1| flagellar basal-body rod protein flgC [Shigella flexneri K-671]
 gi|332767681|gb|EGJ97874.1| hypothetical protein SF293071_1335 [Shigella flexneri 2930-71]
 gi|333004883|gb|EGK24403.1| flagellar basal-body rod protein flgC [Shigella flexneri VA-6]
 gi|333005580|gb|EGK25098.1| flagellar basal-body rod protein flgC [Shigella flexneri K-218]
 gi|333008276|gb|EGK27750.1| flagellar basal-body rod protein flgC [Shigella flexneri K-272]
 gi|333019432|gb|EGK38715.1| flagellar basal-body rod protein flgC [Shigella flexneri K-304]
 gi|333019766|gb|EGK39038.1| flagellar basal-body rod protein flgC [Shigella flexneri K-227]
          Length = 42

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            PNV+V+ E  +    +R Y AN++ +     MM  TL L +
Sbjct: 1   MPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ 42


>gi|254445900|ref|ZP_05059376.1| flagellar basal-body rod protein FlgG [Verrucomicrobiae bacterium
           DG1235]
 gi|198260208|gb|EDY84516.1| flagellar basal-body rod protein FlgG [Verrucomicrobiae bacterium
           DG1235]
          Length = 260

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)

Query: 80  GHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G+P A+       G ++  NVN++ E  +M    R Y  N ++I+ S  MM     L R
Sbjct: 202 GNPGADGSGTLQQGYLETSNVNIVEEMVNMILAQRAYEINSKSIQTSDSMMQQVAQLKR 260



 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 7/47 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          A SG+  Q   + +IS NIAN  TTG       +++  + F+++ + 
Sbjct: 8  AASGMEAQQTNLNVISNNIANVSTTG-------FKKSKVEFQDMFYQ 47


>gi|95929195|ref|ZP_01311939.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
 gi|95134693|gb|EAT16348.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
          Length = 111

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 19/127 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I +   A SGL  Q+ R+   + N+AN++T G       Y    ++  E   G    ++
Sbjct: 1   MIDAMSSAMSGLQAQTLRLNSTANNVANSQTEG-------YAPSQVTLAENEQGGVRAQL 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +K            +                V++  E  DM +T + Y ANL+T+  +  
Sbjct: 54  QKPVNGTGDAQTAENQT------------SKVDLAKEMVDMMQTKQFYSANLKTVSVADS 101

Query: 124 MMTTTLD 130
           M    LD
Sbjct: 102 MSGDLLD 108


>gi|150020364|ref|YP_001305718.1| flagellar basal-body rod protein FlgG [Thermosipho melanesiensis
           BI429]
 gi|149792885|gb|ABR30333.1| flagellar basal-body rod protein FlgG [Thermosipho melanesiensis
           BI429]
          Length = 261

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NV+++ E  DM    R Y  N +T++ + +M+ T  ++ R
Sbjct: 215 QGYVEKSNVDIVKEMVDMISAMRAYELNSRTVQTADEMLRTASNMKR 261



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I   + A +G+  Q  ++  +S NIAN  T G       Y++    F+++++
Sbjct: 1  MINGLYTAATGMWAQQFKLDTLSNNIANVDTAG-------YKKVKTEFQDLLY 46


>gi|94266018|ref|ZP_01289739.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|94270422|ref|ZP_01291737.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93450809|gb|EAT01850.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93453413|gb|EAT03835.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 118

 Score = 67.3 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 12/128 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++     A SGL     +    + N+AN  T G       Y++  +S  E     GGV  
Sbjct: 1   MVGGIQAALSGLQALQQKNSATAHNVANVNTDG-------YKKVKVSLAETT-PPGGVEA 52

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +   +D +   +  +     A+   +V+  NV++  E  +M  + R + ANL+ ++   +
Sbjct: 53  RAEKID-TPGPQVSEQT---ADGPELVEKSNVDLAEEMPNMMLSRRYFQANLKVVQTEDE 108

Query: 124 MMTTTLDL 131
            +   L++
Sbjct: 109 RLGNLLNI 116


>gi|183220929|ref|YP_001838925.1| flagellar basal-body rod protein FlgG [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189911025|ref|YP_001962580.1| endoflagellar distal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167775701|gb|ABZ94002.1| Endoflagellar distal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167779351|gb|ABZ97649.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 286

 Score = 67.3 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV+V+ E  DM E NR Y AN +T++    ++    +++R
Sbjct: 240 QGYLEASNVSVVTEMVDMIEVNRAYEANSKTMQTQDSLLGRLFEIMR 286



 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++   +   +G+  Q  RM +++ N+AN   TG    +  ++
Sbjct: 1  MLRGLYTGANGMISQQVRMDVVANNLANVDKTGFKKDTTVFK 42


>gi|254516991|ref|ZP_05129049.1| flagellar basal-body rod protein FlgG [gamma proteobacterium
           NOR5-3]
 gi|219674496|gb|EED30864.1| flagellar basal-body rod protein FlgG [gamma proteobacterium
           NOR5-3]
          Length = 261

 Score = 66.9 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 78  DPGHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            PG+P  N     + G V+  NVNV+ E  +M ET R Y  N + I  +  M+ 
Sbjct: 202 QPGNPGLNGLGTLSQGYVESSNVNVVEELVNMIETQRAYEMNSRAISTADQMLQ 255



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S  I+ +GL  Q  +M  I+ N+AN  TTG       ++R    FE++++ +
Sbjct: 1  MNQSLWISKTGLDAQQTKMSTIANNLANVGTTG-------FKRGRAIFEDLIYQN 48


>gi|302343757|ref|YP_003808286.1| flagellar basal-body rod protein FlgG [Desulfarculus baarsii DSM
           2075]
 gi|301640370|gb|ADK85692.1| flagellar basal-body rod protein FlgG [Desulfarculus baarsii DSM
           2075]
          Length = 260

 Score = 66.9 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 70  QSTFVEEFDPGHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +S       PG P A+     A G ++  NV+V+ E  +M    R Y AN ++I  S  M
Sbjct: 192 ESPASGVAVPGDPGADQFGTLAQGFLEMSNVSVVDEMVNMIVAQRAYEANSKSITTSDQM 251

Query: 125 MTTTLDLLR 133
           + T   + R
Sbjct: 252 LQTANQVKR 260



 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A +G+  Q   + +IS N+AN  TTG       +++    FE++M+ +
Sbjct: 1  MMRSLYTAATGMTAQQLNLDVISNNLANVNTTG-------FKKSRADFEDLMYQT 48


>gi|88704304|ref|ZP_01102018.1| Flagellar basal-body rod protein flgG [Congregibacter litoralis
           KT71]
 gi|88701355|gb|EAQ98460.1| Flagellar basal-body rod protein flgG [Congregibacter litoralis
           KT71]
          Length = 243

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 78  DPGHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            PG+P  N     + G V+  NVNV+ E  +M ET R Y  N + I  +  M+ 
Sbjct: 184 QPGNPGLNGLGTLSQGYVESSNVNVVEELVNMIETQRAYEMNSRAISTADQMLQ 237


>gi|300311354|ref|YP_003775446.1| flagellar basal-body rod protein FlgG [Herbaspirillum seropedicae
           SmR1]
 gi|300074139|gb|ADJ63538.1| flagellar basal-body rod FlgG protein [Herbaspirillum seropedicae
           SmR1]
          Length = 260

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 78  DPGHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +P +P  N       G V+  NVNV+ E  +M +T R Y  N + I  S  M+     L
Sbjct: 202 NPNNPGTNGAGALWQGYVETSNVNVVEELVNMIQTQRAYEINSKAITTSDQMLAKLSQL 260



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +GL  Q  ++ +IS N+AN  T G       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGLDAQQTQLDVISNNLANVSTNG-------FKRSRAVFEDLLYQT 48


>gi|86357860|ref|YP_469752.1| flagellar basal body rod protein [Rhizobium etli CFN 42]
 gi|86281962|gb|ABC91025.1| probable flagellar basal body rod protein [Rhizobium etli CFN 42]
          Length = 101

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 49/126 (38%), Gaps = 32/126 (25%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           +IA SG+  Q+ R+  I+ N+AN      TP    Y R   S   V   SGGV+      
Sbjct: 8   NIALSGVRAQTTRVGAIANNVAN----SSTPD---YARLNTSLTTV--ASGGVQAT---- 54

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                      G+P A         +V+   E  ++ E  + Y AN    +   DM    
Sbjct: 55  -----------GNPTA--------SDVDPATELTNLLEAEQSYKANATVFETGADMWEML 95

Query: 129 LDLLRD 134
           + + RD
Sbjct: 96  MSIKRD 101


>gi|222100099|ref|YP_002534667.1| Flagellar basal-body rod protein FlgG [Thermotoga neapolitana DSM
           4359]
 gi|221572489|gb|ACM23301.1| Flagellar basal-body rod protein FlgG [Thermotoga neapolitana DSM
           4359]
          Length = 268

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A   G ++  NV+V+ E  DM    R Y  N + I+ + +M+ T  ++ R
Sbjct: 219 AIKQGFLEKSNVDVVREMVDMITAQRAYEFNSRVIQTADEMLRTATNVKR 268



 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ S + A +G++ Q  ++  I+ N+AN  TTG       Y++    F+++++ 
Sbjct: 8  MMISLYSAATGMSAQQFKLDTIANNLANVDTTG-------YKKVRAEFQDLLYQ 54


>gi|218778846|ref|YP_002430164.1| flagellar basal body rod protein FlgG [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760230|gb|ACL02696.1| Flagellar basal-body rod protein FlgG [Desulfatibacillum
           alkenivorans AK-01]
          Length = 260

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           + G ++  NVNV+ E   M    R Y AN + I+ +  M+   
Sbjct: 213 SQGFLEMSNVNVVEEMVTMIIAQRAYEANSKAIQTADSMLQIA 255



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 9/62 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++     A +G+  Q   + ++S N+AN  TT        ++R    F+++M+ +  +RV
Sbjct: 1  MLRGLWTAATGMEAQQLNIDVVSNNLANINTTA-------FKRSRPDFQDLMYQT--IRV 51

Query: 64 KK 65
            
Sbjct: 52 AG 53


>gi|92114096|ref|YP_574024.1| flagellar basal-body rod FlgG [Chromohalobacter salexigens DSM
           3043]
 gi|91797186|gb|ABE59325.1| Flagellar basal-body rod FlgG [Chromohalobacter salexigens DSM
           3043]
          Length = 260

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E   M ET R Y  N + ++ S  M++    L
Sbjct: 216 QGYVETSNVNVVEEMVSMIETQRAYEINSKAVETSDQMLSRLTQL 260



 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          +I S   A +GL  Q  ++ +IS N++N  T G       ++R    FE++++ +    G
Sbjct: 1  MIRSLWTAKTGLESQQVKLDVISNNLSNVSTNG-------FKRSRPVFEDLLYQNVRQPG 53

Query: 61 VRVKKIGVDQSTFV 74
           +   +    S   
Sbjct: 54 AQASAVDTLPSGLQ 67


>gi|170288994|ref|YP_001739232.1| flagellar basal-body rod protein FlgG [Thermotoga sp. RQ2]
 gi|170176497|gb|ACB09549.1| flagellar basal-body rod protein FlgG [Thermotoga sp. RQ2]
          Length = 261

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A   G ++  NV+V+ E  DM    R Y  N + I+ + +M+ T  ++ R
Sbjct: 212 AIKQGFLEKSNVDVVREMVDMITAQRAYEFNSRVIQTADEMLRTATNVKR 261



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ S + A +G++ Q  ++  I+ N+AN  TTG       Y++    F+++++ 
Sbjct: 1  MMISLYSAATGMSAQQFKLDTIANNLANVDTTG-------YKKVRAEFQDLLYQ 47


>gi|332704840|ref|ZP_08424928.1| flagellar basal body rod protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554989|gb|EGJ52033.1| flagellar basal body rod protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 126

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 24/136 (17%)

Query: 8   AHIANS--GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +I+ S   L   + ++ + + N+AN  T       + +R   +  E+   G  GVRV  
Sbjct: 1   MNISPSLQALDAVAIQLMVTANNVANVNT-------EEFRAARVDLEDGYQGQ-GVRVAD 52

Query: 66  IGV--DQSTFVEEFDPGHP--------VANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           I    DQ        P +P           A G V+  N ++ VE   +      Y ANL
Sbjct: 53  IRRRSDQGP----HIPDNPERLAAAGYATAAEGWVQGSNTDLAVELTRLMREEATYTANL 108

Query: 116 QTIKQSHDMMTTTLDL 131
           + ++ +H+M    ++L
Sbjct: 109 RVMRTAHEMAGNIIEL 124


>gi|157363239|ref|YP_001470006.1| flagellar basal-body rod protein FlgG [Thermotoga lettingae TMO]
 gi|157313843|gb|ABV32942.1| flagellar basal-body rod protein FlgG [Thermotoga lettingae TMO]
          Length = 261

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A   G ++  NV+V+ E  DM    R Y  N + I+ + +M+ T   L R
Sbjct: 212 ALQQGYLEKANVDVVKEMVDMITAQRAYELNARAIQTADNMLQTVSTLKR 261



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ S + A +G+  Q  ++  IS N+AN  TTG       Y++    F+++++ 
Sbjct: 1  MMVSLYSAATGMWAQQYKLDTISNNLANVDTTG-------YKKVRAEFQDLVYQ 47


>gi|15644290|ref|NP_229342.1| flagellar basal-body rod protein FlgG [Thermotoga maritima MSB8]
 gi|148270380|ref|YP_001244840.1| flagellar basal-body rod protein FlgG [Thermotoga petrophila RKU-1]
 gi|281412686|ref|YP_003346765.1| flagellar basal-body rod protein FlgG [Thermotoga naphthophila
           RKU-10]
 gi|4982109|gb|AAD36609.1|AE001800_19 flagellar basal-body rod protein FlgG [Thermotoga maritima MSB8]
 gi|147735924|gb|ABQ47264.1| flagellar basal-body rod protein FlgG [Thermotoga petrophila RKU-1]
 gi|281373789|gb|ADA67351.1| flagellar basal-body rod protein FlgG [Thermotoga naphthophila
           RKU-10]
          Length = 261

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A   G ++  NV+V+ E  DM    R Y  N + I+ + +M+ T  ++ R
Sbjct: 212 AIKQGFLEKSNVDVVREMVDMITAQRAYEFNSRVIQTADEMLRTATNVKR 261



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ S + A +G++ Q  ++  I+ N+AN  TTG       Y++    F+++++ 
Sbjct: 1  MMISLYSAATGMSAQQFKLDTIANNLANVDTTG-------YKKVRAEFQDLLYQ 47


>gi|253996317|ref|YP_003048381.1| flagellar basal-body rod protein FlgG [Methylotenera mobilis JLW8]
 gi|253982996|gb|ACT47854.1| flagellar basal-body rod protein FlgG [Methylotenera mobilis JLW8]
          Length = 260

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + I  S  M+     +
Sbjct: 216 QGYVETSNVNVVEELVNMIQTQRAYEINSKAITTSDQMLQKLTQM 260



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +GL  Q  +M +IS N+AN  T G       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGLDAQQTQMDVISNNLANVSTNG-------FKRSRAVFEDLLYQT 48


>gi|74317650|ref|YP_315390.1| flagellar basal body rod protein FlgG [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057145|gb|AAZ97585.1| flagellar basal body rod protein FlgG [Thiobacillus denitrificans
           ATCC 25259]
          Length = 260

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + I+ S  M+     L
Sbjct: 216 QGYVETSNVNVVEELVNMIQTQRAYEINSKAIQTSDQMLQRLTQL 260



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q  +M +IS N+AN  T+G       ++R    FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTSG-------FKRARAVFEDLLYQT 48


>gi|154710440|gb|ABS84283.1| FlgG-2 [Treponema paraluiscuniculi]
          Length = 271

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 45  RRKTISFEEV--MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           R K ++FE V  +   G     +  V  +    E  P  P A   G V+  NVNV+ E  
Sbjct: 180 RLKIVTFENVRYLQKKGADTYMQTPVSGAPIAAE-GPERPAA-VQGFVEASNVNVVNEMV 237

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTT 128
            M E NR Y AN +TI+    MM   
Sbjct: 238 RMIEVNRAYEANQKTIQAEDGMMGRL 263



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 14/66 (21%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---FEEVMHGSGGVRVKKIG 67
          A SG++ Q  R+  I++N+AN  TT        Y+R       F E++      RV   G
Sbjct: 8  AASGMSAQQHRLDAIAQNLANVDTTS-------YKRDVAVHKSFPELLLR----RVNDDG 56

Query: 68 VDQSTF 73
          V ++ F
Sbjct: 57 VVKNPF 62


>gi|183220919|ref|YP_001838915.1| flagellar basal body rod protein FlgG [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189911015|ref|YP_001962570.1| flagellar basal body rod protein FlgG [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167775691|gb|ABZ93992.1| Endoflagellar distal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167779341|gb|ABZ97639.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 265

 Score = 64.6 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E  +M    R Y +N +TI+ S +M++T + L R
Sbjct: 219 QGFLEMSNVKIVEEMVNMIVAQRAYESNSKTIQTSDNMLSTAIGLKR 265



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 13/69 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE------EVMHG 57
          ++ S     +G+  Q   +  ++ N+AN  TTG       +++  + FE      +V+ G
Sbjct: 1  MMRSLWTGATGMIAQQFHIDTVANNLANVNTTG-------FKKNRVDFEDLVYQHQVLAG 53

Query: 58 SGGVRVKKI 66
          +    V +I
Sbjct: 54 TPATSVSEI 62


>gi|297538898|ref|YP_003674667.1| flagellar basal-body rod protein FlgG [Methylotenera sp. 301]
 gi|297258245|gb|ADI30090.1| flagellar basal-body rod protein FlgG [Methylotenera sp. 301]
          Length = 260

 Score = 64.6 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + I  S  M+     +
Sbjct: 216 QGYVETSNVNVVEELVNMIQTQRAYEINSKAITTSDQMLQKLTQM 260



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +GL  Q  +M +I+ N+AN  T G       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGLDAQQTQMDVIANNLANVSTNG-------FKRSRAVFEDLLYQN 48


>gi|218508323|ref|ZP_03506201.1| probable flagellar basal body rod protein [Rhizobium etli Brasil 5]
 gi|327191050|gb|EGE58103.1| putative flagellar basal body rod protein [Rhizobium etli CNPAF512]
          Length = 100

 Score = 64.6 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 44/126 (34%), Gaps = 33/126 (26%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           +IA SG+  Q  R+  I+ N+AN      TPG   Y R   S      G     V+ I  
Sbjct: 8   NIALSGMRAQMTRIGAIANNVAN----SSTPG---YARLNTSLTSTEPG-----VQAIVE 55

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             +                      +V+   E  +M E  + Y AN    +   DM    
Sbjct: 56  PTT---------------------SDVDPATELTEMIEAEQAYKANAAVFETGADMWEML 94

Query: 129 LDLLRD 134
           + + RD
Sbjct: 95  MSIKRD 100


>gi|15639945|ref|NP_219398.1| flagellar basal-body rod protein (flgG-2) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189026184|ref|YP_001933956.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|3323282|gb|AAC65916.1| flagellar basal-body rod protein (flgG-2) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189018759|gb|ACD71377.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|291060316|gb|ADD73051.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 271

 Score = 64.6 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 45  RRKTISFEEV--MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           R K ++FE V  +   G     +  V  +    E  P  P A   G V+  NVNV+ E  
Sbjct: 180 RLKIVTFENVRYLQKKGADTYMQTPVSGAPIAAE-GPERPAA-VQGFVEASNVNVVNEMV 237

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTT 128
            M E NR Y AN +TI+    MM   
Sbjct: 238 RMIEVNRAYEANQKTIQAEDGMMGRL 263



 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 14/66 (21%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---FEEVMHGSGGVRVKKIG 67
          A SG++ Q  R+  I++N+AN  TT        Y+R       F E++      RV   G
Sbjct: 8  AASGMSAQQRRLDAIAQNLANVDTTS-------YKRDVAVHKSFPELLLR----RVNDDG 56

Query: 68 VDQSTF 73
          V ++ F
Sbjct: 57 VVKNPF 62


>gi|218135322|ref|ZP_03464126.1| hypothetical protein BACPEC_03227 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990707|gb|EEC56718.1| hypothetical protein BACPEC_03227 [Bacteroides pectinophilus ATCC
           43243]
          Length = 276

 Score = 64.6 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 21/48 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NVNV  E  ++    R Y  N + I  S +M+     L R
Sbjct: 228 KQGYLEGSNVNVATEMVNLITAQRAYELNSKAINASDEMLQQANQLYR 275



 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A SG+  Q   +  I+ N+AN  TTG       Y+ ++  F+ +++ +   + 
Sbjct: 5  MMRSLWTAASGMTAQQTNVDTIANNLANVNTTG-------YKTESAEFKTLLYQNLQTKT 57

Query: 64 K 64
           
Sbjct: 58 T 58


>gi|154249604|ref|YP_001410429.1| flagellar basal-body rod protein FlgG [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153540|gb|ABS60772.1| flagellar basal-body rod protein FlgG [Fervidobacterium nodosum
           Rt17-B1]
          Length = 261

 Score = 64.6 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NV+V+ E  DM    R Y  N ++I  +  M+ T  +L R
Sbjct: 215 QGYVEKSNVDVVKEMVDMITAMRAYEFNSRSIITADQMLQTASNLRR 261



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +I S + A +G+  Q  +M  +S NIAN  T G       Y++    F+++++ 
Sbjct: 1  MINSLYTAATGMWTQQFKMDTVSNNIANVDTAG-------YKKIKAEFQDLIYS 47


>gi|197285508|ref|YP_002151380.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227355999|ref|ZP_03840391.1| flagellar basal-body rod protein (distal rod protein) [Proteus
           mirabilis ATCC 29906]
 gi|194682995|emb|CAR43442.1| flagellar basal-body rod protein (distal rod protein) [Proteus
           mirabilis HI4320]
 gi|227163987|gb|EEI48889.1| flagellar basal-body rod protein (distal rod protein) [Proteus
           mirabilis ATCC 29906]
          Length = 260

 Score = 64.6 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + I  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAISTSDQMLQKLTQL 260



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|220905030|ref|YP_002480342.1| hypothetical protein Ddes_1767 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869329|gb|ACL49664.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 133

 Score = 64.6 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 16/139 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR--------KTISFE 52
           M  +  S  +  S +   S  M + + N+AN      TPG +P R         + +  +
Sbjct: 1   MSGINTSMQLGASAMNTHSWGMAVSAHNVANV----STPGFEPQRAVYATGPAGQGVRLD 56

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
            V+  +G V       + +  V +   G P+  AS        N+  E   M  T   Y 
Sbjct: 57  AVLQRNGPVGTGGTAYNAAQAVYDVTAGLPLEAAS----PSGTNLAREMVSMISTQHAYK 112

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN  T++ +  M+ T LD+
Sbjct: 113 ANATTVRTADAMLGTLLDI 131


>gi|239817163|ref|YP_002946073.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
 gi|239803740|gb|ACS20807.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
          Length = 260

 Score = 64.6 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           + G V+  NVNV+ E  +M  T R Y  N + ++ S  M+     L
Sbjct: 215 SQGYVEASNVNVVEELVNMIATQRAYEINSKAVQTSDQMLQRLAQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +IA +GL  Q  ++ ++S N+AN  TTG       ++R    FE++M+ +
Sbjct: 1  MMRSLYIAKTGLDAQQTQLDVVSNNLANVGTTG-------FKRSRAVFEDLMYQN 48


>gi|152980126|ref|YP_001353113.1| FlgG flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
 gi|151280203|gb|ABR88613.1| FlgG flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
          Length = 260

 Score = 64.6 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +P  N +G V     +  NVNV+ E  +M +T R Y  N + I  S  M+     L
Sbjct: 204 NNPGTNGAGYVQQNYVETSNVNVVEEMVNMIQTQRAYEINSKAISTSDQMLQRLTQL 260



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q  +M +IS N+AN  T+G       ++R    FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTSG-------FKRSRAVFEDLLYQN 48


>gi|119503646|ref|ZP_01625729.1| hypothetical protein MGP2080_03865 [marine gamma proteobacterium
           HTCC2080]
 gi|119460708|gb|EAW41800.1| hypothetical protein MGP2080_03865 [marine gamma proteobacterium
           HTCC2080]
          Length = 261

 Score = 64.6 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%)

Query: 79  PGHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           PG+P  N       G V+  NVNV+ E  +M ET R Y  N + I  +  M+ 
Sbjct: 203 PGNPGLNGLGTLQQGFVEGSNVNVVEELVNMIETQRAYEMNSKAISTADQMLQ 255



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S  IA +GL  Q  +M  IS N+ANA T G       ++R  + FE++++ +
Sbjct: 1  MSQSLWIAKTGLDAQQTKMATISNNLANAGTNG-------FKRGRVIFEDLLYQN 48


>gi|82702455|ref|YP_412021.1| hypothetical protein Nmul_A1326 [Nitrosospira multiformis ATCC
           25196]
 gi|82410520|gb|ABB74629.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 260

 Score = 64.6 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N ++++ S  M+     L
Sbjct: 216 QGYVETSNVNVVEELVNMIQTQRAYEINSKSVQTSDQMLQRLTQL 260



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +GL  Q  +M +I+ N+AN  T G       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGLDAQQTQMDVIANNLANVSTNG-------FKRSRAVFEDLLYQT 48


>gi|317050615|ref|YP_004111731.1| flagellar basal-body rod protein FlgG [Desulfurispirillum indicum
           S5]
 gi|316945699|gb|ADU65175.1| flagellar basal-body rod protein FlgG [Desulfurispirillum indicum
           S5]
          Length = 262

 Score = 64.6 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 23/50 (46%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A A G ++  NV ++ E  +M    R Y  N + I    +M+ T   L R
Sbjct: 213 AIAQGFLEQSNVQLVEEMVNMISAQRAYEINSKAITTGDEMLQTATQLKR 262



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I +   A++G+  Q   +  IS N+AN  T     G   +++  + F+++M+ +
Sbjct: 1  MIRALWTASTGMMAQQTHIDNISNNLANVNT-----GG--FKKSRVEFQDLMYQT 48


>gi|220932494|ref|YP_002509402.1| flagellar basal-body rod protein FlgG [Halothermothrix orenii H
           168]
 gi|219993804|gb|ACL70407.1| flagellar basal-body rod protein FlgG [Halothermothrix orenii H
           168]
          Length = 262

 Score = 64.6 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV V+ E  +M    R Y  N + I+ + +M+ T   L R
Sbjct: 215 AQGFLEMSNVKVVEEMVNMIAAQRAYEINSKAIQAADEMLRTASQLRR 262



 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +I +   A +G+  Q   +  IS N+AN  TTG       +++  ++F+++M+ 
Sbjct: 1  MIGALWTAATGMDAQQTNIDTISNNLANVNTTG-------FKKTRVNFQDLMYQ 47


>gi|83647171|ref|YP_435606.1| flagellar basal body rod protein FlgG [Hahella chejuensis KCTC
           2396]
 gi|83635214|gb|ABC31181.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
          Length = 261

 Score = 64.2 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G+V+  NV ++ E  +M  T R Y  N + +  +  M+ 
Sbjct: 215 EQGMVETSNVEIVEEMVNMITTQRAYEMNAKVVTTADQMLQ 255



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 7/48 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +GLA Q   ++ IS N+AN  TTG       ++R    F+++++ 
Sbjct: 7  VSKTGLAAQDTALKTISNNLANVNTTG-------FKRDRAVFQDLLYQ 47


>gi|21672606|ref|NP_660673.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008454|sp|Q8K9K4|FLGG_BUCAP RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|21623237|gb|AAM67884.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 260

 Score = 64.2 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N ++I  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKSINTSDQMLQKLSQL 260



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +GL  Q   M +IS N+AN  T G       ++R    FE++M+ +
Sbjct: 1  MIPSLWISKTGLDAQQINMNVISNNLANVSTNG-------FKRSRAVFEDLMYQT 48


>gi|222148673|ref|YP_002549630.1| flagellar hook protein [Agrobacterium vitis S4]
 gi|221735659|gb|ACM36622.1| flagellar hook protein [Agrobacterium vitis S4]
          Length = 108

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 42/127 (33%), Gaps = 25/127 (19%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SG+  Q  R+  I+ NIANA T G       Y+R   +         GV      
Sbjct: 7   LNSATSGMLAQQTRLTNIASNIANADTPG-------YQRLNTTLSA---SGSGVAATTTR 56

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              +   +                  NV+ L E  DM        AN +  +   DM   
Sbjct: 57  STDAPATQ---------------DTSNVDPLREITDMIGAENGLAANAKVFETGADMWDM 101

Query: 128 TLDLLRD 134
            + + RD
Sbjct: 102 LMSVKRD 108


>gi|218689031|ref|YP_002397243.1| flagellar basal body rod protein FlgG [Escherichia coli ED1a]
 gi|218426595|emb|CAR07423.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli ED1a]
          Length = 260

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVEMSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|237752808|ref|ZP_04583288.1| flagellar basal-body rod protein distal rod protein [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376297|gb|EEO26388.1| flagellar basal-body rod protein distal rod protein [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 263

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 25/49 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           A G V+  NV ++ E  D+    R Y AN ++I+ +  M+     L R+
Sbjct: 215 AQGFVETSNVKLVEEMTDLIVGQRAYEANSKSIQTADSMLQIVNQLKRN 263



 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ + + A +G+  Q  ++ + S NI+N  T G       YR++   F ++ H 
Sbjct: 1  MMRALYTATTGMLGQQLQIDVTSNNISNVNTFG-------YRKERAEFADLFHQ 47


>gi|238758108|ref|ZP_04619288.1| Flagellar basal-body rod protein flgG [Yersinia aldovae ATCC 35236]
 gi|238703646|gb|EEP96183.1| Flagellar basal-body rod protein flgG [Yersinia aldovae ATCC 35236]
          Length = 260

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLTQL 260



 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|238782794|ref|ZP_04626823.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
           43970]
 gi|238716217|gb|EEQ08200.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
           43970]
          Length = 260

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQRLTQL 260



 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|226327742|ref|ZP_03803260.1| hypothetical protein PROPEN_01615 [Proteus penneri ATCC 35198]
 gi|225203446|gb|EEG85800.1| hypothetical protein PROPEN_01615 [Proteus penneri ATCC 35198]
          Length = 111

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + I  S  M+     L
Sbjct: 67  QGYVETSNVNVAEELVNMIQTQRAYEINSKAISTSDQMLQKLTQL 111


>gi|238764394|ref|ZP_04625344.1| Flagellar basal-body rod protein flgG [Yersinia kristensenii ATCC
           33638]
 gi|238697420|gb|EEP90187.1| Flagellar basal-body rod protein flgG [Yersinia kristensenii ATCC
           33638]
          Length = 260

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLTQL 260



 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|22126388|ref|NP_669811.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM 10]
 gi|45441407|ref|NP_992946.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108807175|ref|YP_651091.1| flagellar basal-body rod protein FlgG [Yersinia pestis Antiqua]
 gi|108812481|ref|YP_648248.1| flagellar basal-body rod protein FlgG [Yersinia pestis Nepal516]
 gi|145598608|ref|YP_001162684.1| flagellar basal-body rod protein FlgG [Yersinia pestis Pestoides F]
 gi|149366249|ref|ZP_01888284.1| flagellar basal-body rod protein FlgG [Yersinia pestis CA88-4125]
 gi|162420398|ref|YP_001606475.1| flagellar basal-body rod protein FlgG [Yersinia pestis Angola]
 gi|165925935|ref|ZP_02221767.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938754|ref|ZP_02227309.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010911|ref|ZP_02231809.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166210683|ref|ZP_02236718.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401156|ref|ZP_02306659.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419985|ref|ZP_02311738.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425757|ref|ZP_02317510.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467493|ref|ZP_02332197.1| flagellar basal-body rod protein FlgG [Yersinia pestis FV-1]
 gi|218928924|ref|YP_002346799.1| flagellar basal-body rod protein FlgG [Yersinia pestis CO92]
 gi|229896244|ref|ZP_04511414.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
 gi|229897179|ref|ZP_04512335.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229897905|ref|ZP_04513056.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902863|ref|ZP_04517980.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
 gi|270486643|ref|ZP_06203717.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
 gi|294504028|ref|YP_003568090.1| flagellar basal-body rod protein FlgG [Yersinia pestis Z176003]
 gi|21959374|gb|AAM86062.1|AE013853_10 cell-distal portion of basal-body rod [Yersinia pestis KIM 10]
 gi|45436267|gb|AAS61823.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108776129|gb|ABG18648.1| flagellar basal-body rod protein FlgG [Yersinia pestis Nepal516]
 gi|108779088|gb|ABG13146.1| flagellar basal-body rod protein FlgG [Yersinia pestis Antiqua]
 gi|115347535|emb|CAL20444.1| flagellar basal-body rod protein FlgG [Yersinia pestis CO92]
 gi|145210304|gb|ABP39711.1| flagellar basal-body rod protein FlgG [Yersinia pestis Pestoides F]
 gi|149292662|gb|EDM42736.1| flagellar basal-body rod protein FlgG [Yersinia pestis CA88-4125]
 gi|162353213|gb|ABX87161.1| flagellar basal-body rod protein FlgG [Yersinia pestis Angola]
 gi|165913368|gb|EDR31990.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922139|gb|EDR39316.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990255|gb|EDR42556.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166207863|gb|EDR52343.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961680|gb|EDR57701.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049545|gb|EDR60953.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055156|gb|EDR64953.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229680310|gb|EEO76409.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
 gi|229688946|gb|EEO81011.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693516|gb|EEO83565.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701167|gb|EEO89196.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
 gi|262361786|gb|ACY58507.1| flagellar basal-body rod protein FlgG [Yersinia pestis D106004]
 gi|262366078|gb|ACY62635.1| flagellar basal-body rod protein FlgG [Yersinia pestis D182038]
 gi|270335147|gb|EFA45924.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
 gi|294354487|gb|ADE64828.1| flagellar basal-body rod protein FlgG [Yersinia pestis Z176003]
 gi|320015465|gb|ADV99036.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 232

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 188 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLAQL 232


>gi|284007173|emb|CBA72457.1| flagellar basal-body rod protein FlgG [Arsenophonus nasoniae]
          Length = 260

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E   M +T R Y  N + +  S  M+   + L
Sbjct: 216 QGYVETSNVNVAEELVSMIQTQRAYEINSKAVSTSDQMLQRLMQL 260



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R    F+++M+ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNG-------FKRGRAVFQDLMYQT 48


>gi|238794000|ref|ZP_04637618.1| Flagellar basal-body rod protein flgG [Yersinia intermedia ATCC
           29909]
 gi|238726632|gb|EEQ18168.1| Flagellar basal-body rod protein flgG [Yersinia intermedia ATCC
           29909]
          Length = 260

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLTQL 260



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|332525064|ref|ZP_08401244.1| flagellar basal-body rod protein FlgG [Rubrivivax benzoatilyticus
           JA2]
 gi|332108353|gb|EGJ09577.1| flagellar basal-body rod protein FlgG [Rubrivivax benzoatilyticus
           JA2]
          Length = 260

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 23/48 (47%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A   G V+  NVNV+ E  +M  T R Y  N + I+ S  M+     L
Sbjct: 213 ALQQGFVETSNVNVVEELVNMIATQRAYELNSKAIQTSDQMLQKLGQL 260



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S  IA +G+  Q  ++ +IS N+AN  T G       ++R  + FE++++ +
Sbjct: 1  MLRSLWIAKTGMEGQQTKLDVISNNLANVGTNG-------FKRGGVQFEDLIYQN 48


>gi|116252321|ref|YP_768159.1| hypothetical protein RL2575 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256969|emb|CAK08063.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 101

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 47/133 (35%), Gaps = 38/133 (28%)

Query: 8   AHIAN------SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             I+       SG+  Q+ R+  I+ NIAN      TPG   Y R   S   V    GGV
Sbjct: 1   MSISGIASTALSGMRAQTTRVSAIANNIAN----SSTPG---YARLNTSLTSVE--PGGV 51

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +                   P A         +++   E AD+ E  + Y AN    +  
Sbjct: 52  QAVV---------------SPTA--------SDIDPATELADLIEAEQSYKANAVVFETG 88

Query: 122 HDMMTTTLDLLRD 134
            DM    + + RD
Sbjct: 89  ADMWEMLMSIKRD 101


>gi|238799109|ref|ZP_04642565.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
           43969]
 gi|238717056|gb|EEQ08916.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
           43969]
          Length = 260

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLTQL 260



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|309388846|gb|ADO76726.1| flagellar basal-body rod protein FlgG [Halanaerobium praevalens DSM
           2228]
          Length = 260

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E  +M    R Y  N ++I+ S +M+ T   L R
Sbjct: 214 QGFLEMSNVKVVEEMVNMIAAQRAYETNSKSIQASDEMLQTANQLKR 260



 Score = 41.5 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I++   + +G+  Q   + +IS N+AN  T+G
Sbjct: 1  MISALWTSATGMNSQQTNIDVISNNLANVNTSG 33


>gi|307546966|ref|YP_003899445.1| flagellar basal body rod protein FlgG [Halomonas elongata DSM 2581]
 gi|307218990|emb|CBV44260.1| flagellar basal body rod protein FlgG [Halomonas elongata DSM 2581]
          Length = 260

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           + G V+  NVNV+ E   M +T R Y  N + ++ S +M+     L
Sbjct: 215 SQGYVETSNVNVVEEMVGMIQTQRAYEINSKAVQTSDEMLARLTQL 260



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S   A +GL  Q  ++ +IS N+AN  T G       ++R    FE++++ +
Sbjct: 1  MINSLWTAKTGLESQQVKLDVISNNLANVNTNG-------FKRSRAVFEDLLYQN 48


>gi|34558104|ref|NP_907919.1| flagellar basal body rod protein FlgG [Wolinella succinogenes DSM
           1740]
 gi|34483822|emb|CAE10819.1| FLAGELLAR BASAL-BODY ROD PROTEIN DISTAL ROD PROTEIN [Wolinella
           succinogenes]
          Length = 263

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            G V+  NV ++ E  D+    R Y AN ++I+ +  M+ T   L R+
Sbjct: 216 QGFVELSNVKLVEEMTDLITGQRAYEANSKSIQTADSMLQTVNSLKRN 263



 Score = 41.5 bits (97), Expect = 0.046,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ + + A +G+  Q  ++ + S NIAN  T G       Y+++   F ++ + 
Sbjct: 1  MMRALYTATTGMMGQQLQIDVTSNNIANVNTIG-------YKKQRAEFADLFYQ 47


>gi|270262399|ref|ZP_06190670.1| flagellar basal-body rod protein FlgG [Serratia odorifera 4Rx13]
 gi|270043083|gb|EFA16176.1| flagellar basal-body rod protein FlgG [Serratia odorifera 4Rx13]
          Length = 260

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLTQL 260



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|123442782|ref|YP_001006759.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122089743|emb|CAL12596.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 217

 Score = 63.8 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 173 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLTQL 217


>gi|269138584|ref|YP_003295284.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|267984244|gb|ACY84073.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|304558594|gb|ADM41258.1| Flagellar basal-body rod protein FlgG [Edwardsiella tarda FL6-60]
          Length = 260

 Score = 63.8 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + I  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAISTSDQMLQRLTQL 260



 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S +IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|300871597|ref|YP_003786470.1| flagellar basal-body rod protein FlgG [Brachyspira pilosicoli
           95/1000]
 gi|300689298|gb|ADK31969.1| flagellar basal-body rod protein, FlgG [Brachyspira pilosicoli
           95/1000]
          Length = 264

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NV V+ E  DM    R Y  N + ++ S +++ T ++L R
Sbjct: 218 QGFVEMSNVKVVDEMVDMIVAQRAYEMNSKAVQTSDNLLATVVNLKR 264



 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A SG+     +   I+ N+AN  T G       Y++    FE++++ +  ++ 
Sbjct: 1  MLRSLWTAASGMNGMQFKTDTIANNLANVNTIG-------YKKVRADFEDLIYQNLKIQG 53

Query: 64 KKIGVDQSTFV 74
               D  T V
Sbjct: 54 TPATEDTVTPV 64


>gi|225619854|ref|YP_002721111.1| flagellar basal body rod protein FlgG [Brachyspira hyodysenteriae
           WA1]
 gi|225214673|gb|ACN83407.1| flagellar basal body rod protein FlgG [Brachyspira hyodysenteriae
           WA1]
          Length = 264

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NV V+ E  DM    R Y  N + ++ S +++ T ++L R
Sbjct: 218 QGFVEMSNVKVVDEMVDMIVAQRAYEMNSKAVQTSDNLLATVVNLKR 264



 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A SG+     +   I+ N+AN  T G       Y++    FE++++ +  ++ 
Sbjct: 1  MVRSLWTAASGMNGMQFKTDTIANNLANVNTIG-------YKKVRADFEDLIYQNLKIQG 53

Query: 64 KKIGVDQSTFV 74
               D  T V
Sbjct: 54 TPATEDTVTPV 64


>gi|261886055|ref|ZP_06010094.1| flagellar basal body rod protein FlgG [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 262

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G V+  NV ++ E  D+    R Y AN + I  + +M+ T   L R
Sbjct: 215 KQGFVEMSNVQLVEEMTDLITGQRAYEANSKAITTADEMLQTVNQLKR 262



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S + A +G+  Q  ++   S NIAN  T G       Y++    F ++M+ +
Sbjct: 1  MIRSLYTAATGMVAQQTQIDTTSHNIANVNTIG-------YKKNRAEFADLMYQT 48


>gi|302671949|ref|YP_003831909.1| flagellar basal-body rod protein FlgG1 [Butyrivibrio
           proteoclasticus B316]
 gi|302396422|gb|ADL35327.1| flagellar basal-body rod protein FlgG1 [Butyrivibrio
           proteoclasticus B316]
          Length = 276

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVNV  E  ++    R Y  N   I+ + +MM T   L R
Sbjct: 230 QGYLEGSNVNVATEMVNLIVAQRAYEMNSTAIQTTDEMMQTANGLKR 276



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A +G+  Q   +  IS N+AN  T G       Y+ +   F+ +++  
Sbjct: 1  MVRSLWSAATGMNAQQTNVDTISNNLANVNTAG-------YKAQGAQFKSLLYQE 48


>gi|238751764|ref|ZP_04613252.1| Flagellar basal-body rod protein flgG [Yersinia rohdei ATCC 43380]
 gi|238710035|gb|EEQ02265.1| Flagellar basal-body rod protein flgG [Yersinia rohdei ATCC 43380]
          Length = 260

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLTQL 260



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|186895116|ref|YP_001872228.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           PB1/+]
 gi|186698142|gb|ACC88771.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           PB1/+]
          Length = 260

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLAQL 260



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|118475132|ref|YP_891713.1| flagellar basal body rod protein FlgG [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414358|gb|ABK82778.1| flagellar basal-body rod protein FlgG [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 262

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G V+  NV ++ E  D+    R Y AN + I  + +M+ T   L R
Sbjct: 215 KQGFVEMSNVQLVEEMTDLITGQRAYEANSKAITTADEMLQTVNQLKR 262



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S + A +G+  Q  ++   S NIAN  T G       Y++    F ++M+ +
Sbjct: 1  MIRSLYTAATGMVAQQTQIDTTSHNIANVNTIG-------YKKNRAEFADLMYQT 48


>gi|238788317|ref|ZP_04632111.1| Flagellar basal-body rod protein flgG [Yersinia frederiksenii ATCC
           33641]
 gi|238723563|gb|EEQ15209.1| Flagellar basal-body rod protein flgG [Yersinia frederiksenii ATCC
           33641]
          Length = 260

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLTQL 260



 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|238755322|ref|ZP_04616665.1| Flagellar basal-body rod protein flgG [Yersinia ruckeri ATCC 29473]
 gi|238706458|gb|EEP98832.1| Flagellar basal-body rod protein flgG [Yersinia ruckeri ATCC 29473]
          Length = 260

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVTTSDQMLQKLTQL 260



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|157371205|ref|YP_001479194.1| flagellar basal body rod protein FlgG [Serratia proteamaculans 568]
 gi|157322969|gb|ABV42066.1| flagellar basal-body rod protein FlgG [Serratia proteamaculans 568]
          Length = 260

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLTQL 260



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|51596013|ref|YP_070204.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           IP 32953]
 gi|153947499|ref|YP_001401288.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           IP 31758]
 gi|170024645|ref|YP_001721150.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           YPIII]
 gi|51589295|emb|CAH20916.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Yersinia pseudotuberculosis IP 32953]
 gi|152958994|gb|ABS46455.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           IP 31758]
 gi|169751179|gb|ACA68697.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           YPIII]
          Length = 260

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLAQL 260



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|313141242|ref|ZP_07803435.1| flagellar basal-body rod protein distal rod protein [Helicobacter
           canadensis MIT 98-5491]
 gi|313130273|gb|EFR47890.1| flagellar basal-body rod protein distal rod protein [Helicobacter
           canadensis MIT 98-5491]
          Length = 262

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            G V+  NV ++ E  D+    R Y AN ++I+ +  M+     L R+
Sbjct: 215 QGFVETSNVKLVEEMTDLIVGQRAYEANSKSIQTADSMLQIVNQLKRN 262



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 7/47 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          A +G+  Q  ++ + S NI+N  T G       YR++   F ++ H 
Sbjct: 7  ATTGMLGQQLQIDVTSNNISNVNTFG-------YRKERAEFADLFHQ 46


>gi|238919261|ref|YP_002932776.1| flagellar basal body rod protein FlgG [Edwardsiella ictaluri
           93-146]
 gi|238868830|gb|ACR68541.1| flagellar basal-body rod protein FlgG, putative [Edwardsiella
           ictaluri 93-146]
          Length = 260

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + I  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAISTSDQMLQRLTQL 260



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S +IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|332161324|ref|YP_004297901.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318605244|emb|CBY26742.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325665554|gb|ADZ42198.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860604|emb|CBX70901.1| flagellar basal-body rod protein flgG [Yersinia enterocolitica
           W22703]
          Length = 260

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLTQL 260



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|294635612|ref|ZP_06714089.1| flagellar basal-body rod protein FlgG [Edwardsiella tarda ATCC
           23685]
 gi|291091064|gb|EFE23625.1| flagellar basal-body rod protein FlgG [Edwardsiella tarda ATCC
           23685]
          Length = 260

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + I  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAISTSDQMLQRLTQL 260



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S +IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|226944494|ref|YP_002799567.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
 gi|226719421|gb|ACO78592.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
          Length = 260

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E   M +T R Y  N + ++ S +M+     L
Sbjct: 216 QGYVETSNVNVVEEMVSMIQTQRAYEINSKAVETSDEMLARLTQL 260



 Score = 41.8 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S   A +GL  Q  +M +I+ N+AN  T G       ++R    FE++++ +
Sbjct: 1  MIRSLWTAKTGLESQQVQMDVIANNLANVATNG-------FKRTRAVFEDLLYQN 48


>gi|296127366|ref|YP_003634618.1| flagellar basal-body rod protein FlgG [Brachyspira murdochii DSM
           12563]
 gi|296019182|gb|ADG72419.1| flagellar basal-body rod protein FlgG [Brachyspira murdochii DSM
           12563]
          Length = 264

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NV V+ E  DM    R Y  N + ++ S +++ T ++L R
Sbjct: 218 QGFVEMSNVKVVDEMVDMIVAQRAYEMNSKAVQTSDNLLATVVNLKR 264



 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A SG+     +   I+ N+AN  T G       Y++    FE++++ +  ++ 
Sbjct: 1  MVRSLWTAASGMNGMQFKTDTIANNLANVNTIG-------YKKVRADFEDLIYQNLKIQG 53

Query: 64 KKIGVDQSTFV 74
               D    V
Sbjct: 54 TPATEDTVRPV 64


>gi|224417699|ref|ZP_03655705.1| flagellar basal body rod protein FlgG [Helicobacter canadensis MIT
           98-5491]
 gi|253827048|ref|ZP_04869933.1| flagellar distal rod protein FlgG [Helicobacter canadensis MIT
           98-5491]
 gi|253510454|gb|EES89113.1| flagellar distal rod protein FlgG [Helicobacter canadensis MIT
           98-5491]
          Length = 263

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            G V+  NV ++ E  D+    R Y AN ++I+ +  M+     L R+
Sbjct: 216 QGFVETSNVKLVEEMTDLIVGQRAYEANSKSIQTADSMLQIVNQLKRN 263



 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ + + A +G+  Q  ++ + S NI+N  T G       YR++   F ++ H 
Sbjct: 1  MMRALYTATTGMLGQQLQIDVTSNNISNVNTFG-------YRKERAEFADLFHQ 47


>gi|238785495|ref|ZP_04629478.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
           43970]
 gi|238713597|gb|EEQ05626.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
           43970]
          Length = 260

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLTQL 260



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|283850788|ref|ZP_06368074.1| flagellar basal body rod protein [Desulfovibrio sp. FW1012B]
 gi|283573711|gb|EFC21685.1| flagellar basal body rod protein [Desulfovibrio sp. FW1012B]
          Length = 121

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 9/128 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  IA S L+     M      +A A        +D YR +    E    G  GVRV
Sbjct: 1   MTDALSIAQSALSA----MGTT---MAVAANNVANAATDGYRSREARLETGPDGQ-GVRV 52

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             I  D        + G P      +    +V++  +   M   +R + AN   I+ + D
Sbjct: 53  ADIAPDAPPAGLPAE-GGPARPGVDLAAVSDVDLAGQVVSMTLASRTFEANAAVIRTADD 111

Query: 124 MMTTTLDL 131
           M  T LDL
Sbjct: 112 MAGTLLDL 119


>gi|224370168|ref|YP_002604332.1| FlgG1 [Desulfobacterium autotrophicum HRM2]
 gi|223692885|gb|ACN16168.1| FlgG1 [Desulfobacterium autotrophicum HRM2]
          Length = 117

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 15/126 (11%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           + + + S L     +M + + N+AN  +       D +++      E  + +  V+V   
Sbjct: 4   AINTSASALKAFGTKMAVSANNVANVYS-------DDFKKSRALVTEGQNDA--VKVDIS 54

Query: 67  GVDQSTFVEEFDPGHPVANASGIV-KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            VD    VE       + N   +V +  N ++  E  D   T R + AN +TI+    M+
Sbjct: 55  KVDTGGPVET-----RMMNGEAVVPELSNTDLAGEFTDQIITQRAFEANTRTIQTEDQML 109

Query: 126 TTTLDL 131
            T LD+
Sbjct: 110 GTLLDI 115


>gi|242309754|ref|ZP_04808909.1| flagellar basal body rod protein FlgG [Helicobacter pullorum MIT
           98-5489]
 gi|239523755|gb|EEQ63621.1| flagellar basal body rod protein FlgG [Helicobacter pullorum MIT
           98-5489]
          Length = 263

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            G V+  NV ++ E  D+    R Y AN ++I+ +  M+     L R+
Sbjct: 216 QGFVETSNVKLVEEMTDLIVGQRAYEANSKSIQTADSMLQIVNQLKRN 263



 Score = 38.0 bits (88), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ + + A +G+  Q  ++ + S NI+N  T G       YR++   F ++ H 
Sbjct: 1  MMRALYTATTGMLGQQLQIDVTSNNISNVNTFG-------YRKERAEFADLFHQ 47


>gi|294828153|ref|NP_712848.2| flagellar basal body rod protein FlgG [Leptospira interrogans
           serovar Lai str. 56601]
 gi|293386000|gb|AAN49866.2| endoflagellar distal basal body rod protein [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 264

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E   M    R Y +N + I+ S +M++T + L R
Sbjct: 218 QGFLEMSNVKIVEEMVAMIVAQRAYESNSKAIQTSDNMLSTAISLKR 264



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 13/68 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE------EVMHGS 58
          + S   A +G+  Q   +  IS N+AN  TTG       +++    FE      +V+ G+
Sbjct: 1  MRSLWTAATGMIAQQFHIDTISNNLANVNTTG-------FKKNRADFEDLVYQHQVLAGT 53

Query: 59 GGVRVKKI 66
              V +I
Sbjct: 54 PATSVSEI 61


>gi|190891944|ref|YP_001978486.1| flagellar basal body rod protein [Rhizobium etli CIAT 652]
 gi|190697223|gb|ACE91308.1| probable flagellar basal body rod protein [Rhizobium etli CIAT 652]
          Length = 100

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 33/126 (26%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           +IA SG+  Q+ R+  I+ N+AN+ T+G       Y R          G     V+ I  
Sbjct: 8   NIALSGMRAQATRIGAIANNVANSSTSG-------YARLNTGLTSTEPG-----VQAIVE 55

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             +                      +V+   E  +M E  + Y AN    +   DM    
Sbjct: 56  PTT---------------------SDVDPATELTEMIEAEQAYKANAAVFETGADMWEML 94

Query: 129 LDLLRD 134
           + + RD
Sbjct: 95  MSIKRD 100


>gi|182412221|ref|YP_001817287.1| flagellar basal-body rod protein FlgG [Opitutus terrae PB90-1]
 gi|177839435|gb|ACB73687.1| flagellar basal-body rod protein FlgG [Opitutus terrae PB90-1]
          Length = 261

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN++ E  ++    R Y  N ++I+ S +M+     + R
Sbjct: 215 QGYIESSNVNIVEEMVNLIVAQRAYEINSKSIQTSDEMLQNVAQMKR 261



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 7/47 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          A +G+  Q   +  I+ N+AN  T G       ++R  I F+++++ 
Sbjct: 8  AATGMEAQQLNLNTIANNLANVNTPG-------FKRSKIEFQDLLYQ 47


>gi|116331368|ref|YP_801086.1| flagellar basal body rod protein FlgG [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116125057|gb|ABJ76328.1| Endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 264

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E   M    R Y +N + I+ S +M++T + L R
Sbjct: 218 QGFLEMSNVKIVEEMVAMIVAQRAYESNSKAIQTSDNMLSTAISLKR 264



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 13/68 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE------EVMHGS 58
          + S   A +G+  Q   +  IS N+AN  TTG       +++    FE      +V+ G+
Sbjct: 1  MRSLWTAATGMIAQQFHIDTISNNLANVNTTG-------FKKNRADFEDLVYQHQVLAGT 53

Query: 59 GGVRVKKI 66
              V +I
Sbjct: 54 PATSVSEI 61


>gi|124268252|ref|YP_001022256.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
 gi|124261027|gb|ABM96021.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
          Length = 260

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 24/48 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A A G V+  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 213 AIAQGFVEGSNVNVVEELVAMIQTQRAYELNSKAIQTSDQMLQKLAQL 260



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S  I+ +G+  Q  ++  IS N+AN      T G   Y+R    FE++M+ +
Sbjct: 1  MMRSLWISKTGMEAQQTQLDHISHNLAN----SATNG---YKRSHAVFEDLMYQT 48


>gi|78043762|ref|YP_359848.1| flagellar basal-body rod protein FlgG [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995877|gb|ABB14776.1| flagellar basal-body rod protein FlgG [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 261

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M  T R Y AN + I  S  M+   L++ R
Sbjct: 215 SGYLEMSNVDLASEFTEMIVTQRGYQANARVITTSDQMLEELLNIKR 261



 Score = 38.0 bits (88), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 19/66 (28%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------------G 60
          SGL     +M +++ NI+N  T G       Y+   ++FE++++               G
Sbjct: 10 SGLKSHQYKMDVVANNISNVNTIG-------YKSSRVNFEDLIYQKTNQSGVYPSYVGLG 62

Query: 61 VRVKKI 66
          V V  +
Sbjct: 63 VNVSGV 68


>gi|323175233|gb|EFZ60846.1| flagellar basal-body rod protein flgG domain protein [Escherichia
           coli LT-68]
          Length = 202

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 158 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 202


>gi|15616948|ref|NP_240161.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681701|ref|YP_002468087.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682256|ref|YP_002468640.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|257471397|ref|ZP_05635396.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           LSR1 (Acyrthosiphon pisum)]
 gi|11386809|sp|P57424|FLGG_BUCAI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|25298916|pir||G84969 flagellar basal-body rod protein flgG [imported] - Buchnera sp.
           (strain APS)
 gi|10039013|dbj|BAB13047.1| flagellar basal-body rod protein flgG [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621989|gb|ACL30145.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|219624544|gb|ACL30699.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086079|gb|ADP66161.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           LL01 (Acyrthosiphon pisum)]
 gi|311086651|gb|ADP66732.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|311087237|gb|ADP67317.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
 gi|311087756|gb|ADP67835.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           JF98 (Acyrthosiphon pisum)]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N ++I  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKSISTSDQMLQKLSQL 260



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +GL  Q   M IIS N+AN  T G       ++R    FE++M+ +
Sbjct: 1  MIPSLWISKTGLDAQQINMNIISNNLANVSTNG-------FKRSRAVFEDLMYQT 48


>gi|317492426|ref|ZP_07950855.1| flagellar basal-body rod protein FlgG [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919765|gb|EFV41095.1| flagellar basal-body rod protein FlgG [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVTTSDQMLQRLTQL 260



 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S +IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++M+ +
Sbjct: 1  MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLMYQT 48


>gi|116327820|ref|YP_797540.1| flagellar basal body rod protein FlgG [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116120564|gb|ABJ78607.1| Endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
          Length = 265

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E   M    R Y +N + I+ S +M++T + L R
Sbjct: 219 QGFLEMSNVKIVEEMVAMIVAQRAYESNSKAIQTSDNMLSTAISLKR 265



 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 13/69 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE------EVMHG 57
          ++ S   A +G+  Q   +  IS N+AN  TTG       +++    FE      +V+ G
Sbjct: 1  MMRSLWTAATGMIAQQFHIDTISNNLANVNTTG-------FKKNRADFEDLVYQHQVLAG 53

Query: 58 SGGVRVKKI 66
          +    V +I
Sbjct: 54 TPATSVSEI 62


>gi|45657204|ref|YP_001290.1| flagellar basal body rod protein FlgG [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45600442|gb|AAS69927.1| FlgG [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
          Length = 265

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E   M    R Y +N + I+ S +M++T + L R
Sbjct: 219 QGFLEMSNVKIVEEMVAMIVAQRAYESNSKAIQTSDNMLSTAISLKR 265



 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 13/69 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE------EVMHG 57
          ++ S   A +G+  Q   +  IS N+AN  TTG       +++    FE      +V+ G
Sbjct: 1  MMRSLWTAATGMIAQQFHIDTISNNLANVNTTG-------FKKNRADFEDLVYQHQVLAG 53

Query: 58 SGGVRVKKI 66
          +    V +I
Sbjct: 54 TPATSVSEI 62


>gi|27904804|ref|NP_777930.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|38372207|sp|Q89AH7|FLGG_BUCBP RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|27904202|gb|AAO27035.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            V+  NVN+  E  +M +  R Y  N + I  +  M+   
Sbjct: 218 YVETSNVNIAEELVNMIQAQRAYEINSKVITTADQMLQKL 257



 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGG 60
          +I +  IA +GL  Q   M +I+ N+AN  T G       ++R    FE++++      G
Sbjct: 1  MIPALWIAKTGLDAQQINMNVIANNLANVNTNG-------FKRSKAIFEDLIYHTVQQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +  +  +  S F  
Sbjct: 54 SKSSEETISPSGFQL 68


>gi|261339378|ref|ZP_05967236.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
           ATCC 35316]
 gi|288318179|gb|EFC57117.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
           ATCC 35316]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|195940720|ref|ZP_03086102.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. EC4024]
 gi|295096223|emb|CBK85313.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|146311248|ref|YP_001176322.1| flagellar basal body rod protein FlgG [Enterobacter sp. 638]
 gi|145318124|gb|ABP60271.1| flagellar basal-body rod protein FlgG [Enterobacter sp. 638]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|296102906|ref|YP_003613052.1| flagellar basal body rod protein FlgG [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057365|gb|ADF62103.1| flagellar basal body rod protein FlgG [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|204930805|ref|ZP_03221678.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204320264|gb|EDZ05468.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|300722680|ref|YP_003711970.1| flagellar basal-body rod cell-distal protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629187|emb|CBJ89783.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Xenorhabdus nematophila ATCC 19061]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTSDQMLQKLTQL 260



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL VQ   M +I+ N+AN  T+G       ++R+ +  EE+++ +
Sbjct: 1  MIRSLWIAKTGLDVQQTNMDVIANNLANVSTSG-------FKRQRVVSEELIYQT 48


>gi|156934438|ref|YP_001438354.1| flagellar basal body rod protein FlgG [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532692|gb|ABU77518.1| hypothetical protein ESA_02269 [Cronobacter sakazakii ATCC BAA-894]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|260597447|ref|YP_003210018.1| flagellar basal body rod protein FlgG [Cronobacter turicensis
           z3032]
 gi|260216624|emb|CBA29921.1| Flagellar basal-body rod protein flgG [Cronobacter turicensis
           z3032]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|307627452|gb|ADN71756.1| flagellar basal body rod protein FlgG [Escherichia coli UM146]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|237731009|ref|ZP_04561490.1| flagellar basal body rod protein FlgG [Citrobacter sp. 30_2]
 gi|226906548|gb|EEH92466.1| flagellar basal body rod protein FlgG [Citrobacter sp. 30_2]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|218679061|ref|ZP_03526958.1| hypothetical protein RetlC8_09354 [Rhizobium etli CIAT 894]
          Length = 101

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 32/126 (25%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           + A SG+  Q+ R+  I+ N+AN+ T+G       Y R   S   V   SGGV+      
Sbjct: 8   NTALSGMRAQTTRIGAIANNVANSSTSG-------YARLNTSLTSV--ASGGVQATV--- 55

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                        P A         +V+   E  D+ E  + Y AN    +   DM    
Sbjct: 56  ------------SPTA--------SDVDPATELTDLLEAEQSYKANAVVFETGADMWEML 95

Query: 129 LDLLRD 134
           + + RD
Sbjct: 96  MSIKRD 101


>gi|83747652|ref|ZP_00944688.1| FlgG [Ralstonia solanacearum UW551]
 gi|207728348|ref|YP_002256742.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum MolK2]
 gi|207739735|ref|YP_002258128.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum IPO1609]
 gi|300696915|ref|YP_003747576.1| FlgG: flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
 gi|83725704|gb|EAP72846.1| FlgG [Ralstonia solanacearum UW551]
 gi|206591594|emb|CAQ57206.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum MolK2]
 gi|206593117|emb|CAQ60023.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum IPO1609]
 gi|299073639|emb|CBJ53159.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
          Length = 260

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%)

Query: 82  PVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P AN  G      V+  NVNV+ E  +M +T R Y  N + ++ S  M+     L
Sbjct: 206 PGANGVGVLNQNYVETSNVNVVEEMVNMIQTQRAYEINSKAVQTSDQMLEKLAQL 260



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTG-------FKRSRAVFEDLLYQN 48


>gi|114566479|ref|YP_753633.1| flagellar basal-body rod protein FlgG [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337414|gb|ABI68262.1| flagellar basal-body rod protein FlgG [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 261

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 82  PVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P ++      +G ++  NV ++ E  ++    R Y  N + I  S +M+ T  +L R
Sbjct: 205 PDSDNSVSLEAGYLEMSNVQIVEEMVNLITAQRAYEINSKVIISSDEMLQTAANLRR 261



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A+SG+  Q   +  +S N+AN  T G       ++++ + F+++++ +
Sbjct: 1  MMRSLYTASSGMYAQQLNIDTLSHNMANVNTVG-------FKKQRLEFQDLLYQT 48


>gi|187478187|ref|YP_786211.1| flagellar basal body rod protein FlgG [Bordetella avium 197N]
 gi|115422773|emb|CAJ49301.1| flagellar basal-body rod protein [Bordetella avium 197N]
          Length = 261

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 82  PVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P A+ +G      V+  NVNV  E  +M    R Y  N + +K S +M+     L
Sbjct: 207 PGADGAGSIMQNYVETSNVNVAEELVNMITAQRAYEMNSKAVKTSDEMLARLTQL 261



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 10/65 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S  IA +GL  Q   M +IS N+AN +T G       ++R+   F+++M+ +    G
Sbjct: 1  MMRSLWIAKTGLESQQTSMDVISHNLANVQTNG-------FKRERAVFQDLMYQTLRQPG 53

Query: 61 VRVKK 65
           +V  
Sbjct: 54 AQVGD 58


>gi|198244335|ref|YP_002215958.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197938851|gb|ACH76184.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|326623706|gb|EGE30051.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|322832566|ref|YP_004212593.1| flagellar basal-body rod protein FlgG [Rahnella sp. Y9602]
 gi|321167767|gb|ADW73466.1| flagellar basal-body rod protein FlgG [Rahnella sp. Y9602]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S +M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDEMLQKLSQL 260



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S +IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIPSLYIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|293414371|ref|ZP_06657020.1| flagellar basal-body rod protein FlgG [Escherichia coli B185]
 gi|291434429|gb|EFF07402.1| flagellar basal-body rod protein FlgG [Escherichia coli B185]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+   IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISLLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|283833628|ref|ZP_06353369.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
           29220]
 gi|291071311|gb|EFE09420.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
           29220]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|119899025|ref|YP_934238.1| flagellar basal body rod protein FlgG [Azoarcus sp. BH72]
 gi|119671438|emb|CAL95351.1| flagellar basal-body rod protein FlgG [Azoarcus sp. BH72]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M  T R Y  N + I+ S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIVTQRAYEMNSRAIQTSDSMLGRLTQL 260



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S   A +GL  Q   + +IS N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWTARTGLDAQQTSLDVISNNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|299068734|emb|CBJ39973.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum
           CMR15]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%)

Query: 82  PVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P AN  G      V+  NVNV+ E  +M +T R Y  N + ++ S  M+     L
Sbjct: 206 PGANGVGVLNQNYVETSNVNVVEEMVNMIQTQRAYEINSKAVQTSDQMLEKLAQL 260



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTG-------FKRSRAVFEDLLYQN 48


>gi|218887604|ref|YP_002436925.1| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758558|gb|ACL09457.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV V+ E  +M    R Y  N + I+ S  M+ T + L R
Sbjct: 213 AQGFLEMSNVEVVDEMVNMIVGQRAYEMNSKAIQTSDTMLQTAVQLKR 260



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A +G+  Q   + +IS N+AN  TT        +++    FE++M+ +
Sbjct: 1  MMRSLWTAATGMVAQQLNIDVISNNLANVNTTS-------FKKSRAEFEDLMYQN 48


>gi|205353083|ref|YP_002226884.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205272864|emb|CAR37793.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|326628163|gb|EGE34506.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINCKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|332342624|gb|AEE55958.1| flagellar basal-body rod protein FlgG [Escherichia coli UMNK88]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|311280015|ref|YP_003942246.1| flagellar basal-body rod protein FlgG [Enterobacter cloacae SCF1]
 gi|308749210|gb|ADO48962.1| flagellar basal-body rod protein FlgG [Enterobacter cloacae SCF1]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVTTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|320173530|gb|EFW48726.1| Flagellar basal-body rod protein FlgG [Shigella dysenteriae CDC
           74-1112]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|293395585|ref|ZP_06639868.1| flagellar basal-body rod protein FlgG [Serratia odorifera DSM 4582]
 gi|291421904|gb|EFE95150.1| flagellar basal-body rod protein FlgG [Serratia odorifera DSM 4582]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTSDQMLQKLTQL 260



 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|16760055|ref|NP_455672.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764535|ref|NP_460150.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142174|ref|NP_805516.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56413834|ref|YP_150909.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179696|ref|YP_216113.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161614598|ref|YP_001588563.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553033|ref|ZP_02346783.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167994043|ref|ZP_02575135.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234105|ref|ZP_02659163.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168237261|ref|ZP_02662319.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244778|ref|ZP_02669710.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264028|ref|ZP_02686001.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467131|ref|ZP_02700973.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168822622|ref|ZP_02834622.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194446556|ref|YP_002040433.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450313|ref|YP_002045178.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194472223|ref|ZP_03078207.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194734396|ref|YP_002114178.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197251031|ref|YP_002146864.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262058|ref|ZP_03162132.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197362757|ref|YP_002142394.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|200390304|ref|ZP_03216915.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|207857313|ref|YP_002243964.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213424682|ref|ZP_03357447.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582039|ref|ZP_03363865.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213613179|ref|ZP_03371005.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648928|ref|ZP_03378981.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865503|ref|ZP_03387622.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224584317|ref|YP_002638115.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911001|ref|ZP_04654838.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289828578|ref|ZP_06546403.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|60392289|sp|P0A1J3|FLGG_SALTY RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|60392290|sp|P0A1J4|FLGG_SALTI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|25298926|pir||AD0640 flagellar basal-body rod protein FlgG (distal rod protein)
           [imported] - Salmonella enterica subsp. enterica serovar
           Typhi (strain CT18)
 gi|47677|emb|CAA36314.1| flgG protein product (AA 1-260) [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|16419696|gb|AAL20109.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502349|emb|CAD08303.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29137804|gb|AAO69365.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56128091|gb|AAV77597.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|62127329|gb|AAX65032.1| flagellar biosynthesis, cell-distal portion of basal-body rod
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161363962|gb|ABX67730.1| hypothetical protein SPAB_02348 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194405219|gb|ACF65441.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194408617|gb|ACF68836.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194458587|gb|EDX47426.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194709898|gb|ACF89119.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630467|gb|EDX49093.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197094234|emb|CAR59739.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|197214734|gb|ACH52131.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197240313|gb|EDY22933.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289797|gb|EDY29158.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|199602749|gb|EDZ01295.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205322431|gb|EDZ10270.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328014|gb|EDZ14778.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331903|gb|EDZ18667.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336447|gb|EDZ23211.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205341038|gb|EDZ27802.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347402|gb|EDZ34033.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709116|emb|CAR33449.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|224468844|gb|ACN46674.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261246390|emb|CBG24199.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|267992953|gb|ACY87838.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157720|emb|CBW17212.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|312912166|dbj|BAJ36140.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320086381|emb|CBY96154.1| Flagellar basal-body rod protein flgG Distal rod protein
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321223797|gb|EFX48860.1| Flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616549|gb|EFY13458.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620510|gb|EFY17374.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622504|gb|EFY19349.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629655|gb|EFY26430.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632625|gb|EFY29371.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636880|gb|EFY33583.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641582|gb|EFY38220.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644072|gb|EFY40618.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650028|gb|EFY46446.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653953|gb|EFY50276.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658485|gb|EFY54747.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663343|gb|EFY59545.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670077|gb|EFY66217.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674859|gb|EFY70950.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676671|gb|EFY72738.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682593|gb|EFY78612.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686654|gb|EFY82633.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322714166|gb|EFZ05737.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129449|gb|ADX16879.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195768|gb|EFZ80944.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198340|gb|EFZ83444.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323209179|gb|EFZ94116.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209683|gb|EFZ94612.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217861|gb|EGA02576.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222149|gb|EGA06533.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224921|gb|EGA09179.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229663|gb|EGA13786.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232888|gb|EGA16984.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240623|gb|EGA24665.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242937|gb|EGA26958.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250254|gb|EGA34143.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252629|gb|EGA36467.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258843|gb|EGA42496.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261032|gb|EGA44625.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266941|gb|EGA50426.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269982|gb|EGA53431.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|332988070|gb|AEF07053.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|24112486|ref|NP_706996.1| flagellar basal body rod protein FlgG [Shigella flexneri 2a str.
           301]
 gi|30062614|ref|NP_836785.1| flagellar basal body rod protein FlgG [Shigella flexneri 2a str.
           2457T]
 gi|24051372|gb|AAN42703.1| flagellar basal body rod protein flgG [Shigella flexneri 2a str.
           301]
 gi|30040860|gb|AAP16591.1| flagellar basal body rod protein flgG [Shigella flexneri 2a str.
           2457T]
 gi|281600496|gb|ADA73480.1| Flagellar basal body rod protein flgG [Shigella flexneri 2002017]
 gi|313650470|gb|EFS14877.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2a str.
           2457T]
 gi|332758238|gb|EGJ88561.1| flagellar basal-body rod protein FlgG [Shigella flexneri 4343-70]
 gi|332759659|gb|EGJ89964.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2747-71]
 gi|332761424|gb|EGJ91708.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-671]
 gi|332767686|gb|EGJ97879.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2930-71]
 gi|333005399|gb|EGK24917.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-218]
 gi|333019426|gb|EGK38709.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-304]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|238796906|ref|ZP_04640410.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
           43969]
 gi|238719166|gb|EEQ10978.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
           43969]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 215 KQGYIETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQRLTQL 260



 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|118581849|ref|YP_903099.1| flagellar basal body rod protein FlgG [Pelobacter propionicus DSM
           2379]
 gi|118504559|gb|ABL01042.1| flagellar basal-body rod protein FlgG [Pelobacter propionicus DSM
           2379]
          Length = 262

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G+++  NV+V  E  +M    R Y AN + ++ + +M+ T  +L R
Sbjct: 215 AQGMLEMSNVSVAEEMVNMIIGQRAYEANSKAVQAADEMLQTANNLRR 262



 Score = 45.3 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++ +   A SG+  Q   + +++ N+AN  TTG       ++R    FE++++ + 
Sbjct: 1  MMRALWTAASGMQAQQKNIDVVAHNLANVNTTG-------FKRSRADFEDLIYQNQ 49


>gi|331652131|ref|ZP_08353150.1| flagellar basal-body rod protein FlgG [Escherichia coli M718]
 gi|331050409|gb|EGI22467.1| flagellar basal-body rod protein FlgG [Escherichia coli M718]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|170768358|ref|ZP_02902811.1| flagellar basal-body rod protein FlgG [Escherichia albertii
           TW07627]
 gi|170123124|gb|EDS92055.1| flagellar basal-body rod protein FlgG [Escherichia albertii
           TW07627]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|161503733|ref|YP_001570845.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865080|gb|ABX21703.1| hypothetical protein SARI_01818 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|157146224|ref|YP_001453543.1| flagellar basal body rod protein FlgG [Citrobacter koseri ATCC
           BAA-895]
 gi|157083429|gb|ABV13107.1| hypothetical protein CKO_01981 [Citrobacter koseri ATCC BAA-895]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|15801195|ref|NP_287212.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           EDL933]
 gi|15830710|ref|NP_309483.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. Sakai]
 gi|16129041|ref|NP_415596.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|26247218|ref|NP_753258.1| flagellar basal body rod protein FlgG [Escherichia coli CFT073]
 gi|89107924|ref|AP_001704.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. W3110]
 gi|91210230|ref|YP_540216.1| flagellar basal body rod protein FlgG [Escherichia coli UTI89]
 gi|110641254|ref|YP_668984.1| flagellar basal body rod protein FlgG [Escherichia coli 536]
 gi|110805095|ref|YP_688615.1| flagellar basal body rod protein FlgG [Shigella flexneri 5 str.
           8401]
 gi|117623264|ref|YP_852177.1| flagellar basal body rod protein FlgG [Escherichia coli APEC O1]
 gi|157156521|ref|YP_001462312.1| flagellar basal body rod protein FlgG [Escherichia coli E24377A]
 gi|168747146|ref|ZP_02772168.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4113]
 gi|168758629|ref|ZP_02783636.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4401]
 gi|168764490|ref|ZP_02789497.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4501]
 gi|168767737|ref|ZP_02792744.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4486]
 gi|168773923|ref|ZP_02798930.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4196]
 gi|168783608|ref|ZP_02808615.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4076]
 gi|168790013|ref|ZP_02815020.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC869]
 gi|168802023|ref|ZP_02827030.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC508]
 gi|170080729|ref|YP_001730049.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170679890|ref|YP_001744102.1| flagellar basal body rod protein FlgG [Escherichia coli SMS-3-5]
 gi|188492805|ref|ZP_03000075.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|191168453|ref|ZP_03030241.1| flagellar basal-body rod protein FlgG [Escherichia coli B7A]
 gi|191172450|ref|ZP_03033991.1| flagellar basal-body rod protein FlgG [Escherichia coli F11]
 gi|193064556|ref|ZP_03045636.1| flagellar basal-body rod protein FlgG [Escherichia coli E22]
 gi|193069501|ref|ZP_03050455.1| flagellar basal-body rod protein FlgG [Escherichia coli E110019]
 gi|194438123|ref|ZP_03070216.1| flagellar basal-body rod protein FlgG [Escherichia coli 101-1]
 gi|195935468|ref|ZP_03080850.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. EC4024]
 gi|208806632|ref|ZP_03248969.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4206]
 gi|208815071|ref|ZP_03256250.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4045]
 gi|208822750|ref|ZP_03263069.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4042]
 gi|209399139|ref|YP_002269924.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4115]
 gi|209918332|ref|YP_002292416.1| flagellar basal body rod protein FlgG [Escherichia coli SE11]
 gi|215486287|ref|YP_002328718.1| flagellar basal body rod protein FlgG [Escherichia coli O127:H6
           str. E2348/69]
 gi|217328263|ref|ZP_03444345.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. TW14588]
 gi|218553656|ref|YP_002386569.1| flagellar basal body rod protein FlgG [Escherichia coli IAI1]
 gi|218557960|ref|YP_002390873.1| flagellar basal body rod protein FlgG [Escherichia coli S88]
 gi|218694612|ref|YP_002402279.1| flagellar basal body rod protein FlgG [Escherichia coli 55989]
 gi|218700419|ref|YP_002408048.1| flagellar basal body rod protein FlgG [Escherichia coli IAI39]
 gi|218704486|ref|YP_002412005.1| flagellar basal body rod protein FlgG [Escherichia coli UMN026]
 gi|227886564|ref|ZP_04004369.1| flagellar basal body rod protein FlgG [Escherichia coli 83972]
 gi|237706936|ref|ZP_04537417.1| flagellar basal-body rod protein flgG [Escherichia sp. 3_2_53FAA]
 gi|238900332|ref|YP_002926128.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|253773898|ref|YP_003036729.1| flagellar basal body rod protein FlgG [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161184|ref|YP_003044292.1| flagellar basal body rod protein FlgG [Escherichia coli B str.
           REL606]
 gi|254792460|ref|YP_003077297.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. TW14359]
 gi|256018665|ref|ZP_05432530.1| flagellar basal body rod protein FlgG [Shigella sp. D9]
 gi|256023224|ref|ZP_05437089.1| flagellar basal body rod protein FlgG [Escherichia sp. 4_1_40B]
 gi|260843318|ref|YP_003221096.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|260854561|ref|YP_003228452.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|260867441|ref|YP_003233843.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|261227017|ref|ZP_05941298.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256251|ref|ZP_05948784.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282098|ref|YP_003498916.1| Flagellar basal-body rod protein flgG [Escherichia coli O55:H7 str.
           CB9615]
 gi|293404362|ref|ZP_06648356.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1412]
 gi|293409444|ref|ZP_06653020.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|293433368|ref|ZP_06661796.1| flagellar basal-body rod protein FlgG [Escherichia coli B088]
 gi|297516691|ref|ZP_06935077.1| flagellar basal body rod protein FlgG [Escherichia coli OP50]
 gi|298380142|ref|ZP_06989747.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1302]
 gi|300816780|ref|ZP_07097000.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
 gi|300821141|ref|ZP_07101290.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 119-7]
 gi|300899597|ref|ZP_07117836.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300902469|ref|ZP_07120451.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 84-1]
 gi|300918680|ref|ZP_07135261.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 115-1]
 gi|300922604|ref|ZP_07138704.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 182-1]
 gi|300928370|ref|ZP_07143904.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 187-1]
 gi|300938643|ref|ZP_07153372.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|300950173|ref|ZP_07164118.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 116-1]
 gi|300954382|ref|ZP_07166836.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 175-1]
 gi|300974382|ref|ZP_07172594.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 45-1]
 gi|300982619|ref|ZP_07176203.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 200-1]
 gi|301023265|ref|ZP_07187062.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 69-1]
 gi|301029707|ref|ZP_07192761.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 196-1]
 gi|301051138|ref|ZP_07197968.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 185-1]
 gi|301304983|ref|ZP_07211085.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 124-1]
 gi|301328552|ref|ZP_07221613.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 78-1]
 gi|301644990|ref|ZP_07244956.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
 gi|306814073|ref|ZP_07448246.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|307137713|ref|ZP_07497069.1| flagellar basal body rod protein FlgG [Escherichia coli H736]
 gi|307310144|ref|ZP_07589794.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|309798072|ref|ZP_07692447.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 145-7]
 gi|312968848|ref|ZP_07783055.1| flagellar basal-body rod protein FlgG [Escherichia coli 2362-75]
 gi|331641622|ref|ZP_08342757.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331646336|ref|ZP_08347439.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|331657140|ref|ZP_08358102.1| flagellar basal-body rod protein FlgG [Escherichia coli TA206]
 gi|331662484|ref|ZP_08363407.1| flagellar basal-body rod protein FlgG [Escherichia coli TA143]
 gi|331667478|ref|ZP_08368342.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
 gi|331672598|ref|ZP_08373387.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
 gi|331676869|ref|ZP_08377565.1| flagellar basal-body rod protein FlgG [Escherichia coli H591]
 gi|331682580|ref|ZP_08383199.1| flagellar basal-body rod protein FlgG [Escherichia coli H299]
 gi|332279734|ref|ZP_08392147.1| flagellar basal-body rod protein FlgG [Shigella sp. D9]
 gi|78100014|sp|P0ABX7|FLGG_ECO57 RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|78100015|sp|P0ABX6|FLGG_ECOL6 RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|78100016|sp|P0ABX5|FLGG_ECOLI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|12514619|gb|AAG55824.1|AE005318_1 flagellar biosynthesis, cell-distal portion of basal-body rod
           [Escherichia coli O157:H7 str. EDL933]
 gi|26107619|gb|AAN79818.1|AE016759_92 Flagellar basal-body rod protein flgG [Escherichia coli CFT073]
 gi|1787318|gb|AAC74162.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062656|dbj|BAA35887.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K12 substr. W3110]
 gi|13360920|dbj|BAB34879.1| flagellar basal body rod protein flgG [Escherichia coli O157:H7
           str. Sakai]
 gi|91071804|gb|ABE06685.1| flagellar basal body rod protein FlgG [Escherichia coli UTI89]
 gi|110342846|gb|ABG69083.1| flagellar basal-body rod protein FlgG [Escherichia coli 536]
 gi|110614643|gb|ABF03310.1| flagellar basal-body rod protein FlgG [Shigella flexneri 5 str.
           8401]
 gi|115512388|gb|ABJ00463.1| flagellar basal-body rod protein FlgG [Escherichia coli APEC O1]
 gi|157078551|gb|ABV18259.1| flagellar basal-body rod protein FlgG [Escherichia coli E24377A]
 gi|169888564|gb|ACB02271.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170517608|gb|ACB15786.1| flagellar basal-body rod protein FlgG [Escherichia coli SMS-3-5]
 gi|187770380|gb|EDU34224.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4196]
 gi|188018193|gb|EDU56315.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4113]
 gi|188488004|gb|EDU63107.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|188999095|gb|EDU68081.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4076]
 gi|189354587|gb|EDU73006.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4401]
 gi|189363057|gb|EDU81476.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4486]
 gi|189365523|gb|EDU83939.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4501]
 gi|189370495|gb|EDU88911.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC869]
 gi|189375944|gb|EDU94360.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC508]
 gi|190901472|gb|EDV61233.1| flagellar basal-body rod protein FlgG [Escherichia coli B7A]
 gi|190907334|gb|EDV66932.1| flagellar basal-body rod protein FlgG [Escherichia coli F11]
 gi|192927808|gb|EDV82422.1| flagellar basal-body rod protein FlgG [Escherichia coli E22]
 gi|192957249|gb|EDV87698.1| flagellar basal-body rod protein FlgG [Escherichia coli E110019]
 gi|194423059|gb|EDX39053.1| flagellar basal-body rod protein FlgG [Escherichia coli 101-1]
 gi|208726433|gb|EDZ76034.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4206]
 gi|208731719|gb|EDZ80407.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4045]
 gi|208738235|gb|EDZ85918.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4042]
 gi|209160539|gb|ACI37972.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4115]
 gi|209773358|gb|ACI84991.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773360|gb|ACI84992.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773362|gb|ACI84993.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773364|gb|ACI84994.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773366|gb|ACI84995.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209911591|dbj|BAG76665.1| flagellar basal-body rod protein FlgG [Escherichia coli SE11]
 gi|215264359|emb|CAS08716.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217318690|gb|EEC27116.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. TW14588]
 gi|218351344|emb|CAU97050.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli 55989]
 gi|218360424|emb|CAQ97978.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli IAI1]
 gi|218364729|emb|CAR02419.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli S88]
 gi|218370405|emb|CAR18212.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli IAI39]
 gi|218431583|emb|CAR12462.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli UMN026]
 gi|222032831|emb|CAP75570.1| flagellar basal-body rod protein flgG [Escherichia coli LF82]
 gi|226898146|gb|EEH84405.1| flagellar basal-body rod protein flgG [Escherichia sp. 3_2_53FAA]
 gi|227836768|gb|EEJ47234.1| flagellar basal body rod protein FlgG [Escherichia coli 83972]
 gi|238861100|gb|ACR63098.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|242376882|emb|CAQ31599.1| flagellar basal-body rod protein FlgG, subunit of Flagellar Motor
           Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324942|gb|ACT29544.1| flagellar basal-body rod protein FlgG [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973085|gb|ACT38756.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli B str. REL606]
 gi|253977299|gb|ACT42969.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli BL21(DE3)]
 gi|254591860|gb|ACT71221.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli O157:H7 str. TW14359]
 gi|257753210|dbj|BAI24712.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|257758465|dbj|BAI29962.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|257763797|dbj|BAI35292.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|260449782|gb|ACX40204.1| flagellar basal-body rod protein FlgG [Escherichia coli DH1]
 gi|281178187|dbj|BAI54517.1| flagellar basal-body rod protein FlgG [Escherichia coli SE15]
 gi|284920901|emb|CBG33964.1| flagellar basal-body rod protein FlgG [Escherichia coli 042]
 gi|290761971|gb|ADD55932.1| Flagellar basal-body rod protein flgG [Escherichia coli O55:H7 str.
           CB9615]
 gi|291324187|gb|EFE63609.1| flagellar basal-body rod protein FlgG [Escherichia coli B088]
 gi|291428948|gb|EFF01973.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1412]
 gi|291469912|gb|EFF12396.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|294490415|gb|ADE89171.1| flagellar basal-body rod protein FlgG [Escherichia coli IHE3034]
 gi|298279840|gb|EFI21348.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1302]
 gi|299877395|gb|EFI85606.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 196-1]
 gi|300297159|gb|EFJ53544.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 185-1]
 gi|300307084|gb|EFJ61604.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 200-1]
 gi|300318618|gb|EFJ68402.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 175-1]
 gi|300356868|gb|EFJ72738.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300397110|gb|EFJ80648.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 69-1]
 gi|300405501|gb|EFJ89039.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 84-1]
 gi|300410625|gb|EFJ94163.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 45-1]
 gi|300414174|gb|EFJ97484.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 115-1]
 gi|300421081|gb|EFK04392.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 182-1]
 gi|300450520|gb|EFK14140.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 116-1]
 gi|300456428|gb|EFK19921.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|300463628|gb|EFK27121.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 187-1]
 gi|300526440|gb|EFK47509.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 119-7]
 gi|300530554|gb|EFK51616.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
 gi|300839701|gb|EFK67461.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 124-1]
 gi|300844944|gb|EFK72704.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 78-1]
 gi|301076719|gb|EFK91525.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
 gi|305852710|gb|EFM53158.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|306909862|gb|EFN40356.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|307553080|gb|ADN45855.1| flagellar basal-body rod protein FlgG [Escherichia coli ABU 83972]
 gi|308118355|gb|EFO55617.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 145-7]
 gi|309701350|emb|CBJ00651.1| flagellar basal-body rod protein FlgG [Escherichia coli ETEC
           H10407]
 gi|312286250|gb|EFR14163.1| flagellar basal-body rod protein FlgG [Escherichia coli 2362-75]
 gi|312945640|gb|ADR26467.1| flagellar basal body rod protein FlgG [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|315060356|gb|ADT74683.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli W]
 gi|315135710|dbj|BAJ42869.1| flagellar basal-body rod protein flgG [Escherichia coli DH1]
 gi|315253879|gb|EFU33847.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 85-1]
 gi|315287367|gb|EFU46778.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 110-3]
 gi|315291072|gb|EFU50435.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 153-1]
 gi|315296709|gb|EFU56004.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 16-3]
 gi|315618248|gb|EFU98838.1| flagellar basal-body rod protein FlgG [Escherichia coli 3431]
 gi|320189761|gb|EFW64417.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC1212]
 gi|320196440|gb|EFW71063.1| Flagellar basal-body rod protein FlgG [Escherichia coli WV_060327]
 gi|320200974|gb|EFW75558.1| Flagellar basal-body rod protein FlgG [Escherichia coli EC4100B]
 gi|320637529|gb|EFX07329.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. G5101]
 gi|320643090|gb|EFX12291.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H-
           str. 493-89]
 gi|320648548|gb|EFX17203.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H-
           str. H 2687]
 gi|320653862|gb|EFX21936.1| flagellar basal body rod protein FlgG [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659342|gb|EFX26911.1| flagellar basal body rod protein FlgG [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320664477|gb|EFX31628.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. LSU-61]
 gi|323156885|gb|EFZ43019.1| flagellar basal-body rod protein FlgG [Escherichia coli EPECa14]
 gi|323163703|gb|EFZ49523.1| flagellar basal-body rod protein FlgG [Escherichia coli E128010]
 gi|323175691|gb|EFZ61285.1| flagellar basal-body rod protein FlgG [Escherichia coli 1180]
 gi|323185799|gb|EFZ71160.1| flagellar basal-body rod protein FlgG [Escherichia coli 1357]
 gi|323190590|gb|EFZ75862.1| flagellar basal-body rod protein FlgG [Escherichia coli RN587/1]
 gi|323379083|gb|ADX51351.1| flagellar basal-body rod protein FlgG [Escherichia coli KO11]
 gi|323937818|gb|EGB34082.1| flagellar basal-body rod protein FlgG [Escherichia coli E1520]
 gi|323942547|gb|EGB38714.1| flagellar basal-body rod protein FlgG [Escherichia coli E482]
 gi|323947620|gb|EGB43624.1| flagellar basal-body rod protein FlgG [Escherichia coli H120]
 gi|323953236|gb|EGB49102.1| flagellar basal-body rod protein FlgG [Escherichia coli H252]
 gi|323957902|gb|EGB53614.1| flagellar basal-body rod protein FlgG [Escherichia coli H263]
 gi|323962677|gb|EGB58255.1| flagellar basal-body rod protein FlgG [Escherichia coli H489]
 gi|323967019|gb|EGB62445.1| flagellar basal-body rod protein FlgG [Escherichia coli M863]
 gi|323973333|gb|EGB68522.1| flagellar basal-body rod protein FlgG [Escherichia coli TA007]
 gi|323976549|gb|EGB71637.1| flagellar basal-body rod protein FlgG [Escherichia coli TW10509]
 gi|324007918|gb|EGB77137.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 57-2]
 gi|324013352|gb|EGB82571.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 60-1]
 gi|324017418|gb|EGB86637.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 117-3]
 gi|324117351|gb|EGC11258.1| flagellar basal-body rod protein FlgG [Escherichia coli E1167]
 gi|326339300|gb|EGD63114.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. 1125]
 gi|326344739|gb|EGD68487.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. 1044]
 gi|327253477|gb|EGE65115.1| flagellar basal-body rod protein FlgG [Escherichia coli STEC_7v]
 gi|330910892|gb|EGH39402.1| flagellar basal-body rod protein FlgG [Escherichia coli AA86]
 gi|331038420|gb|EGI10640.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331045088|gb|EGI17215.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|331055388|gb|EGI27397.1| flagellar basal-body rod protein FlgG [Escherichia coli TA206]
 gi|331060906|gb|EGI32870.1| flagellar basal-body rod protein FlgG [Escherichia coli TA143]
 gi|331065063|gb|EGI36958.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
 gi|331070241|gb|EGI41607.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
 gi|331075558|gb|EGI46856.1| flagellar basal-body rod protein FlgG [Escherichia coli H591]
 gi|331080211|gb|EGI51390.1| flagellar basal-body rod protein FlgG [Escherichia coli H299]
 gi|332102086|gb|EGJ05432.1| flagellar basal-body rod protein FlgG [Shigella sp. D9]
 gi|333004888|gb|EGK24408.1| flagellar basal-body rod protein FlgG [Shigella flexneri VA-6]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|300693340|ref|YP_003749313.1| flgg: flagellar basal-body rod protein [Ralstonia solanacearum
           PSI07]
 gi|299075377|emb|CBJ34672.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum
           PSI07]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%)

Query: 82  PVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P AN  G      V+  NVNV+ E  +M +T R Y  N + ++ S  M+     L
Sbjct: 206 PGANGIGVLNQNYVETSNVNVVEEMVNMIQTQRAYEINSKAVQTSDQMLEKLAQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTG-------FKRSRAVFEDLLYQN 48


>gi|218549194|ref|YP_002382985.1| flagellar basal body rod protein FlgG [Escherichia fergusonii ATCC
           35469]
 gi|218356735|emb|CAQ89363.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
 gi|324113873|gb|EGC07847.1| flagellar basal-body rod protein FlgG [Escherichia fergusonii B253]
 gi|325497614|gb|EGC95473.1| flagellar basal body rod protein FlgG [Escherichia fergusonii
           ECD227]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|194432508|ref|ZP_03064795.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 1012]
 gi|194419395|gb|EDX35477.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 1012]
 gi|332092914|gb|EGI97982.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 155-74]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|302390533|ref|YP_003826354.1| flagellar basal-body rod protein FlgG [Thermosediminibacter oceani
           DSM 16646]
 gi|302201161|gb|ADL08731.1| flagellar basal-body rod protein FlgG [Thermosediminibacter oceani
           DSM 16646]
          Length = 268

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 28  NI-ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF----DPGHP 82
           NI AN   TG     +     TI+    ++  G + V     +Q+    E+    DP  P
Sbjct: 156 NISANGTITGRDADGNIEEIGTIALARFLNPEGLLAVGNNLFEQTAASGEYQLKEDPNEP 215

Query: 83  V--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                  G ++  NV V+ E  ++    R Y  N + I+ + +M+    +L R
Sbjct: 216 GFGTILQGFLEMSNVQVVDEMVNLIVAQRAYEINTKAIQTADEMLGQANNLRR 268



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-------RKTISFEEVMH 56
          ++ +   A+SG+  Q   + +IS N+AN  TTG       ++       R+   F+    
Sbjct: 1  MMRALWSASSGMLAQQLNVDVISNNLANVNTTGYKKSRVEFKDLLYETLRRPDVFQPGQG 60

Query: 57 GSGGVRVKKIGVDQSTFV 74
             G++V       ST  
Sbjct: 61 NPVGLQVGHGVRPASTTR 78


>gi|46578928|ref|YP_009736.1| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603471|ref|YP_967871.1| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris DP4]
 gi|46448340|gb|AAS94995.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563700|gb|ABM29444.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris DP4]
 gi|311232786|gb|ADP85640.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris RCH1]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV V+ E  +M    R Y  N + I  S  M+ T ++L R
Sbjct: 213 AQGFLEMSNVEVVDEMVNMIVGQRAYEMNSKAISTSDQMLQTAVNLKR 260



 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A +G+  Q   + +IS N+AN  T+G       +++    FE++M+ +
Sbjct: 1  MMRSLWTAATGMVAQQLNIDVISHNLANVNTSG-------FKKSRAEFEDLMYQN 48


>gi|157160605|ref|YP_001457923.1| flagellar basal body rod protein FlgG [Escherichia coli HS]
 gi|170020526|ref|YP_001725480.1| flagellar basal body rod protein FlgG [Escherichia coli ATCC 8739]
 gi|312971215|ref|ZP_07785393.1| flagellar basal-body rod protein FlgG [Escherichia coli 1827-70]
 gi|157066285|gb|ABV05540.1| flagellar basal-body rod protein FlgG [Escherichia coli HS]
 gi|169755454|gb|ACA78153.1| flagellar basal-body rod protein FlgG [Escherichia coli ATCC 8739]
 gi|310336417|gb|EFQ01603.1| flagellar basal-body rod protein FlgG [Escherichia coli 1827-70]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       Y+R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------YKRQRAVFEDLLYQT 48


>gi|296274032|ref|YP_003656663.1| flagellar basal-body rod protein FlgG [Arcobacter nitrofigilis DSM
           7299]
 gi|296098206|gb|ADG94156.1| flagellar basal-body rod protein FlgG [Arcobacter nitrofigilis DSM
           7299]
          Length = 263

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NV ++ E  D+    R Y AN + I+ +  ++T    L
Sbjct: 216 QGFVEMSNVKLVSEMVDLITAQRAYEANSKAIQTADKLLTIANQL 260



 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +I   + A SG+  Q  ++ + S NI+N  T G       +++    FE++M+ 
Sbjct: 1  MIKGMYTAASGMYAQQHQIDVTSNNISNVNTAG-------FKKDRAEFEDLMYQ 47


>gi|256830176|ref|YP_003158904.1| flagellar basal-body rod protein FlgG [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579352|gb|ACU90488.1| flagellar basal-body rod protein FlgG [Desulfomicrobium baculatum
           DSM 4028]
          Length = 260

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV ++ E  +M    R Y AN ++I  +  M+ T   L R
Sbjct: 213 AQGFLEMSNVEIVEEMVNMIVGQRAYEANSKSITTADMMLQTANQLKR 260



 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I +   + SG+  Q   + + + N+AN  TTG       +++    FE++M+ +
Sbjct: 1  MIRALWTSASGMIAQQLNLDVTANNLANVNTTG-------FKKNRAEFEDLMYQN 48


>gi|289804043|ref|ZP_06534672.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 179

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 135 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 179


>gi|323204838|gb|EFZ89832.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
          Length = 255

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 211 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 255



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 5  TGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 43


>gi|290474974|ref|YP_003467858.1| flagellar basal body rod cell-distal protein [Xenorhabdus bovienii
           SS-2004]
 gi|289174291|emb|CBJ81081.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Xenorhabdus bovienii SS-2004]
          Length = 260

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTSDQMLQKLTQL 260



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|309788147|ref|ZP_07682753.1| flagellar basal-body rod protein flgG [Shigella dysenteriae 1617]
 gi|308923999|gb|EFP69500.1| flagellar basal-body rod protein flgG [Shigella dysenteriae 1617]
          Length = 156

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 112 QGYVETSNVNVAEELVNMIQVQRAYEINSKAMSTTDQMLQKLTQL 156


>gi|218135323|ref|ZP_03464127.1| hypothetical protein BACPEC_03228 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990708|gb|EEC56719.1| hypothetical protein BACPEC_03228 [Bacteroides pectinophilus ATCC
           43243]
          Length = 256

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVNV+ E  +M   +R + AN + +  + D +   + L +
Sbjct: 209 QGYLEQSNVNVVSEMVEMITISRAFEANQKAMNAADDTLKKAVTLGQ 255



 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 13/81 (16%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS---------DPYRRKTISFEEV 54
          ++   + A +GL  Q  R+ ++S N+ANA TT                 Y+ K  S   V
Sbjct: 1  MVKGLYTAYTGLVNQQNRLDVVSNNLANAATTAYKKEGLTSQSFDEVMAYKVKDASVGTV 60

Query: 55 MHGSG----GVRVKKIGVDQS 71
              G    GV++ +   D S
Sbjct: 61 NQYIGDLNLGVKIGESYRDYS 81


>gi|291613040|ref|YP_003523197.1| flagellar basal-body rod protein FlgG [Sideroxydans lithotrophicus
           ES-1]
 gi|291583152|gb|ADE10810.1| flagellar basal-body rod protein FlgG [Sideroxydans lithotrophicus
           ES-1]
          Length = 260

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           + G V+  NVNV+ E  +M +T R Y  N + I  S  M+     +
Sbjct: 215 SQGYVETSNVNVVEELVNMIQTQRAYEINSKAITVSDQMLQKLAQM 260



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +GL  Q  +M +IS N+AN  T G       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGLEAQQTQMDVISNNLANVSTNG-------FKRSRAVFEDLLYQN 48


>gi|121534936|ref|ZP_01666755.1| flagellar basal-body rod protein FlgG [Thermosinus carboxydivorans
           Nor1]
 gi|121306535|gb|EAX47458.1| flagellar basal-body rod protein FlgG [Thermosinus carboxydivorans
           Nor1]
          Length = 262

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 81  HPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +P  + +G      ++  NV V+ E  +M    R Y  N + I  + DM+    +L R
Sbjct: 205 NPGTDGAGTLVQQYLEMSNVQVVEEMVNMIVAQRAYEINAKAITTADDMLGQVANLKR 262



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q A + +IS N+AN  TTG
Sbjct: 1  MMRALWTAGSGMVAQQANVDVISNNLANVNTTG 33


>gi|78358198|ref|YP_389647.1| flagellar basal body rod protein FlgG [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220603|gb|ABB39952.1| Flagellar basal body rod protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 261

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 12/77 (15%)

Query: 58  SGGVRVKKI-GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           + GV V+ + G D    +           A G ++  NV V+ E  +M    R Y  N +
Sbjct: 195 ASGVAVEGVPGEDNVGTI-----------AQGFLEMSNVEVVDEMVNMIVGQRAYEMNSK 243

Query: 117 TIKQSHDMMTTTLDLLR 133
            I+ S +M+ T   L R
Sbjct: 244 AIQASDNMLQTATQLKR 260



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A +G+  Q   +  IS N+AN  T G       +++    FE++M+ +  +  
Sbjct: 1  MMRSLWTAATGMIAQQLNIDTISNNLANVNTLG-------FKKSRAEFEDLMYQNMKIAG 53

Query: 64 KKIGVDQ 70
             G DQ
Sbjct: 54 SVTGNDQ 60


>gi|260893868|ref|YP_003239965.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
 gi|260866009|gb|ACX53115.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
          Length = 266

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 9/76 (11%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVK-----YPNVNVLVETADMRETNRLYMANLQT 117
           V     D +T      PG P  +  G ++       NV++  E  +M  T R Y AN + 
Sbjct: 195 VTPNVTDPATPT----PGAPGTDGRGYIRSGFLEMSNVDLAQEFTNMIITQRGYQANARV 250

Query: 118 IKQSHDMMTTTLDLLR 133
           I  S +++   +DL R
Sbjct: 251 ITTSDELLRELVDLKR 266



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 10/67 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
          ++ S     SGL V   RM +I+ NIAN  TTG       ++    +F++++  + G   
Sbjct: 1  MLRSLFSGVSGLRVHQIRMDVIANNIANINTTG-------FKAARANFQDILSQTLGRSA 53

Query: 61 VRVKKIG 67
          V   ++G
Sbjct: 54 VNTTQVG 60


>gi|213026919|ref|ZP_03341366.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 149

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 105 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 149


>gi|152990377|ref|YP_001356099.1| flagellar basal body and hook protein FlgE [Nitratiruptor sp.
           SB155-2]
 gi|151422238|dbj|BAF69742.1| flagellar basal body and hook protein FlgE [Nitratiruptor sp.
           SB155-2]
          Length = 533

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 28/47 (59%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV++  E  ++    R Y AN +TI  S  ++ TT+D+ R
Sbjct: 487 SGMLEMSNVDISQEFINLITAQRAYQANAKTITTSDQILQTTMDIKR 533



 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 27/115 (23%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           ++ S +  NSGL      + +IS+NIAN  T G       ++++ ++F +++  S     
Sbjct: 1   MLQSFYTGNSGLNANKTWLGVISDNIANVNTNG-------FKQERVNFSDLVASSLTTYS 53

Query: 59  -----------GGVRVKKIGVD--QSTFVEEFDPGHPVANASGI--VKYPNVNVL 98
                      GG  V     D  Q +F     P     +  G   VK P+ ++ 
Sbjct: 54  SSGAPRNKEIGGGAFVAGTIKDFSQGSFKNTNQPLSLALDGEGFFMVKNPSADLT 108


>gi|82544456|ref|YP_408403.1| flagellar basal body rod protein FlgG [Shigella boydii Sb227]
 gi|81245867|gb|ABB66575.1| cell-distal portion of basal-body rod [Shigella boydii Sb227]
 gi|320186975|gb|EFW61688.1| Flagellar basal-body rod protein FlgG [Shigella flexneri CDC
           796-83]
 gi|332094081|gb|EGI99133.1| flagellar basal-body rod protein FlgG [Shigella boydii 3594-74]
          Length = 260

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 19/45 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M      L
Sbjct: 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMQQKLTQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|218886418|ref|YP_002435739.1| hypothetical protein DvMF_1322 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757372|gb|ACL08271.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 136

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 45/140 (32%), Gaps = 20/140 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--- 60
           +I       S L      M + + N+AN  T       D +R   +  +       G   
Sbjct: 1   MIDGFGTPLSALDAFGTSMAVTANNVANMNT-------DEFRASDVRLQTGPASQDGQDG 53

Query: 61  ----VRVKKIGVDQSTFVEEFDPGHP-VAN-----ASGIVKYPNVNVLVETADMRETNRL 110
               V+V +I    +      D      A+      +  ++  N +V  E   M    R 
Sbjct: 54  QERGVQVAEIRQSTTEGPLRMDLRRVVHADGSVTVETSAIEGSNTDVANEMVSMLTDQRA 113

Query: 111 YMANLQTIKQSHDMMTTTLD 130
           + AN   ++   +M    +D
Sbjct: 114 FEANAAVVRARDEMTGILVD 133


>gi|17548568|ref|NP_521908.1| flagellar basal-body rod protein FlgG [Ralstonia solanacearum
           GMI1000]
 gi|17430816|emb|CAD17498.1| probable flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum GMI1000]
          Length = 260

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV+ E  +M +T R Y  N + ++ S  M+     L
Sbjct: 218 YVETSNVNVVEEMVNMIQTQRAYEINSKAVQTSDQMLEKLAQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTG-------FKRSRAVFEDLLYQN 48


>gi|222053732|ref|YP_002536094.1| flagellar basal-body rod protein FlgG [Geobacter sp. FRC-32]
 gi|221563021|gb|ACM18993.1| flagellar basal-body rod protein FlgG [Geobacter sp. FRC-32]
          Length = 262

 Score = 61.5 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+V  E  +M    R Y  N + ++ + +M+ T  +L R
Sbjct: 215 SQGYLEMSNVSVAEEMVNMIVGQRAYEINSKAVQAADEMLQTANNLKR 262



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I +   A SG+  Q   + +++ N+AN  TTG
Sbjct: 1  MIRALWTAASGMQAQQLNIDVVANNLANVNTTG 33


>gi|167568109|ref|ZP_02361025.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis
           EO147]
 gi|167574227|ref|ZP_02367101.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis
           C6786]
          Length = 262

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   + R
Sbjct: 215 KQGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQMSR 262



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q ++M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQSQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|315453484|ref|YP_004073754.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
 gi|315132536|emb|CBY83164.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
          Length = 262

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 80  GHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G+P  +       G ++  NV ++ E  D+    R Y AN +TI+ + +M+ T   L R
Sbjct: 204 GNPNGDGYGQLRQGFLELSNVRLVEEMTDLITAQRAYEANSKTIQTADNMLQTVNSLKR 262



 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S + A +G+  Q   +   S NIAN  T G
Sbjct: 1  MLRSLYSATTGMLGQQTHIDTTSNNIANVNTVG 33


>gi|291518270|emb|CBK73491.1| fagellar hook-basal body proteins [Butyrivibrio fibrisolvens 16/4]
          Length = 272

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NVNV  E  ++    R Y  N + I  S  M+    +L R
Sbjct: 225 AQGYLEGSNVNVADEMVNLIIAQRAYEMNSKAITTSDTMLEQANNLKR 272



 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 23/47 (48%), Gaps = 7/47 (14%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           SG+  Q  ++  I+ N+AN  T         Y+ ++  F+ +++ +
Sbjct: 9  ASGMKGQQVQVDTIANNLANVNTMA-------YKSQSAQFKTLLYQT 48


>gi|89902479|ref|YP_524950.1| flagellar basal-body rod FlgG [Rhodoferax ferrireducens T118]
 gi|89347216|gb|ABD71419.1| Flagellar basal-body rod FlgG [Rhodoferax ferrireducens T118]
          Length = 260

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 82  PVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P A+       G V+  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 206 PGADGMGALMQGYVETSNVNVVQELVTMIQTQRAYEMNSKAIQTSDQMLQKLGQL 260



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +G+  Q  ++ +IS N+AN  T G       ++R +  FE++M+ +
Sbjct: 1  MINSLWISKTGMEAQQMQLDVISNNLANVSTNG-------FKRASAVFEDLMYQN 48


>gi|192361762|ref|YP_001982398.1| flagellar basal body rod protein FlgG [Cellvibrio japonicus
           Ueda107]
 gi|190687927|gb|ACE85605.1| flagellar basal-body rod protein FlgG [Cellvibrio japonicus
           Ueda107]
          Length = 261

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G+++  NV+++ E  +M  T R Y  N + +  +  M+ 
Sbjct: 215 KQGMLESSNVDIVEEMVNMITTQRAYEMNSKVVSTADQMLQ 255



 Score = 43.0 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + ++ +++ +GLA Q  ++  IS N+AN  T G       ++R    FE++++ + 
Sbjct: 1  MHSALYVSKTGLAAQDRQLATISNNLANVATVG-------FKRDRAIFEDLLYQNQ 49


>gi|134300225|ref|YP_001113721.1| hypothetical protein Dred_2386 [Desulfotomaculum reducens MI-1]
 gi|134052925|gb|ABO50896.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum reducens MI-1]
          Length = 266

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E   M E  R Y AN +TI+ + +M     +L
Sbjct: 220 SGYLERSNVDLATEMIGMIEAQRAYAANSRTIQTADEMWDRANNL 264



 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I +     SG+     ++  I  NIAN  TT 
Sbjct: 2  IIKTLSSGASGMRAHQLKLDTIGNNIANINTTA 34


>gi|27380939|ref|NP_772468.1| flagellar basal body rod protein FlgG [Bradyrhizobium japonicum
           USDA 110]
 gi|27354105|dbj|BAC51093.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 262

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 7/62 (11%)

Query: 79  PGHPVANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P    AN  G        ++  NV+V+ E +D+    R Y  N + I  +  MM +T  L
Sbjct: 201 PQDGTANTEGYGKITQGSLEQANVDVVSEMSDLIAAQRAYEMNAKVISAADQMMQSTTAL 260

Query: 132 LR 133
            R
Sbjct: 261 FR 262



 Score = 41.5 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 8/72 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + + H A +G+A Q   +Q+IS NIAN RTTG       ++++T +F+++++     RV 
Sbjct: 1  MQALHTAATGMAAQELNVQVISNNIANLRTTG-------FKKQTAAFQDLIYEHVR-RVG 52

Query: 65 KIGVDQSTFVEE 76
              DQ T V  
Sbjct: 53 AQASDQGTIVPV 64


>gi|332088746|gb|EGI93858.1| flagellar basal-body rod protein FlgG [Shigella boydii 5216-82]
          Length = 260

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 19/45 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V   NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 216 QGYVDTSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|302878278|ref|YP_003846842.1| flagellar basal-body rod protein FlgG [Gallionella
           capsiferriformans ES-2]
 gi|302581067|gb|ADL55078.1| flagellar basal-body rod protein FlgG [Gallionella
           capsiferriformans ES-2]
          Length = 260

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV+ E  +M +T R Y  N ++I  S  M+     +
Sbjct: 218 YVETSNVNVVEEMVNMIQTQRAYEINSKSITTSDQMLQKLSQM 260



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +GL  Q  +M  I+ N+AN  T G       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGLDAQQTQMDTIANNLANVSTNG-------FKRSRAVFEDLLYQT 48


>gi|320179221|gb|EFW54179.1| Flagellar basal-body rod protein FlgG [Shigella boydii ATCC 9905]
          Length = 156

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 112 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 156


>gi|95929874|ref|ZP_01312615.1| Flagellar basal-body rod FlgG [Desulfuromonas acetoxidans DSM 684]
 gi|95134170|gb|EAT15828.1| Flagellar basal-body rod FlgG [Desulfuromonas acetoxidans DSM 684]
          Length = 261

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 26/47 (55%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           + G ++  NV+V+ E  +M    R Y  N + I+ + +M+  T +L+
Sbjct: 215 SQGYLEGSNVSVMEEMVNMIAGQRAYEVNSKAIQTADEMLQMTNNLI 261



 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I +   A +G+  Q   + +I+ N+AN  T+G       +++    F+E+++       
Sbjct: 1  MIRALWTAATGMDSQQTNIDVIANNLANVNTSG-------FKKSRADFQELLYQVSKTPG 53

Query: 64 KKIGVDQSTF 73
               D  + 
Sbjct: 54 SSTSADTVSP 63


>gi|37681979|gb|AAQ97867.1| FlgG [Photorhabdus luminescens]
          Length = 150

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVN+  E  +M +T R Y  N + +  S  M+     L
Sbjct: 108 YVETSNVNIAEELVNMIQTQRAYEVNSKAVSTSDQMLQKLTQL 150


>gi|94987183|ref|YP_595116.1| flagellar basal body rod protein FlgG [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731432|emb|CAJ54795.1| Flagellar basal body L-ring protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 261

 Score = 61.1 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV V+ E   M    R Y  N + I+ S +M+ T + L R
Sbjct: 213 AQGFLEMSNVEVVDEMVQMIVGQRAYEMNSKAIQTSDNMLQTAVQLKR 260



 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A +G+  Q   + +IS N+AN  T+G       +++    FE++M+ +
Sbjct: 1  MMRSLWTAATGMVAQQLNIDVISNNLANTNTSG-------FKKSRAEFEDLMYQT 48


>gi|83721615|ref|YP_440803.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           E264]
 gi|167579490|ref|ZP_02372364.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           TXDOH]
 gi|167617587|ref|ZP_02386218.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           Bt4]
 gi|257140546|ref|ZP_05588808.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           E264]
 gi|83655440|gb|ABC39503.1| flagellar basal-body rod protein FlgG [Burkholderia thailandensis
           E264]
          Length = 262

 Score = 61.1 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   + R
Sbjct: 215 KQGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQMSR 262



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|323703177|ref|ZP_08114830.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
           574]
 gi|323531836|gb|EGB21722.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
           574]
          Length = 256

 Score = 61.1 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M  T R Y AN + I  S  ++   + L R
Sbjct: 210 SGYLEMSNVDLTEEMTNMITTQRGYQANARVITVSDTLLEELIQLKR 256



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 23/70 (32%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------------- 58
          SGL     RM ++  NIAN  T G       ++   ++F++ +  +              
Sbjct: 10 SGLKNHQIRMDVVGNNIANVNTNG-------FKASRVNFQDAISQTMRSASGTPAINPSQ 62

Query: 59 --GGVRVKKI 66
             GV+V  I
Sbjct: 63 IGTGVKVGGI 72


>gi|308273544|emb|CBX30146.1| Flagellar basal-body rod protein flgG [uncultured Desulfobacterium
           sp.]
          Length = 260

 Score = 61.1 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV+V+ E   M    R Y  + ++I+ + +M+    ++ R
Sbjct: 213 AQGFIEMSNVDVVEEMVAMIMAQRAYEVSSKSIQTADNMLQMANNIKR 260



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++     A SG+  Q   + +IS N+AN  T G       +++    F+++M+ +
Sbjct: 1  MLRGMWSAASGMDAQKMMIDVISNNLANVNTVG-------FKKSRPDFQDLMYQT 48


>gi|303328380|ref|ZP_07358818.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3]
 gi|302861710|gb|EFL84646.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3]
          Length = 261

 Score = 61.1 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV V+ E  +M    R Y  N + I+ S  M+   + L R
Sbjct: 213 AQGFLEMSNVEVVDEMVNMIVGQRAYEVNSKAIQTSDSMLGMAVQLKR 260



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   +G+  Q   + +IS N+AN  TTG       +++    FE++M+ +
Sbjct: 1  MMRSLYTGATGMVAQQLNIDVISNNLANVNTTG-------FKKSRAEFEDLMYQT 48


>gi|15606190|ref|NP_213567.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5]
 gi|2983377|gb|AAC06963.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5]
          Length = 262

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN++ E  ++    R Y  N + I+ + +M++   +L R
Sbjct: 216 QGYLESSNVNIVEEMVNLIIAQRAYEFNTKGIQAADEMLSQAANLRR 262



 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 10/74 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          +  +   + SG+  Q   + +IS N+AN  T G       Y++   +F+++++ +    G
Sbjct: 1  MFRALWTSASGMTAQQTNLDVISHNMANVNTVG-------YKKMRATFQDLLYQTVEEPG 53

Query: 61 VRVKKIGVDQSTFV 74
                    S F 
Sbjct: 54 APTSPTTRSPSGFQ 67


>gi|329901232|ref|ZP_08272757.1| Flagellar basal-body rod protein flgG [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549164|gb|EGF33756.1| Flagellar basal-body rod protein flgG [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 260

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           + G V+  NV+V+ E  +M +T R Y  N + I  S  M+     L
Sbjct: 215 SQGYVETSNVSVVEELVNMIQTQRAYEINSKAISTSDQMLAKLSQL 260



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +GL  Q  +M +IS N+AN  T+G       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGLEAQQTQMDVISNNLANVSTSG-------FKRSRAVFEDLLYQT 48


>gi|188587423|ref|YP_001918968.1| flagellar basal-body rod protein FlgG [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179352110|gb|ACB86380.1| flagellar basal-body rod protein FlgG [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 265

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NVN+  E  +M    R Y  N ++I+ + +MM+   +L
Sbjct: 218 QQGFLEGSNVNIAEEMVNMITAQRAYETNSKSIQSTDEMMSIANNL 263



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S     SG+  Q   M ++S N+ANA TTG       Y+     F+++++ +
Sbjct: 1  MFRSLWTGASGMNAQQKNMDVVSNNLANANTTG-------YKNSRAEFQDLIYAT 48


>gi|323165588|gb|EFZ51375.1| flagellar basal-body rod protein flgG [Shigella sonnei 53G]
          Length = 125

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 81  QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 125


>gi|254251193|ref|ZP_04944511.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158]
 gi|124893802|gb|EAY67682.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158]
          Length = 262

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   + R
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQMSR 262



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANTSTNG-------FKASRAVFEDLLYQT 48


>gi|152990359|ref|YP_001356081.1| flagellar basal-body rod protein FlgG [Nitratiruptor sp. SB155-2]
 gi|151422220|dbj|BAF69724.1| flagellar basal-body rod protein FlgG [Nitratiruptor sp. SB155-2]
          Length = 266

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           + G ++  NVN++ E  ++    R Y  N + I  + +M+ T   L
Sbjct: 219 SQGFLEMSNVNIVEEMVNLIVAQRAYEMNSKGITTADEMLRTVATL 264



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I +   + SG+  Q   + ++S NIAN  TTG
Sbjct: 1  MIRALWTSASGMQAQQTNLDVVSNNIANVNTTG 33


>gi|333008282|gb|EGK27756.1| flagellar basal-body rod protein flgG domain protein [Shigella
           flexneri K-272]
 gi|333019772|gb|EGK39044.1| flagellar basal-body rod protein flgG domain protein [Shigella
           flexneri K-227]
          Length = 82

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +  R Y  N + +  +  M+     L
Sbjct: 38  QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 82


>gi|167909129|ref|ZP_02496220.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           112]
          Length = 262

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   + R
Sbjct: 215 KQGYVESSNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQMSR 262



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|302392939|ref|YP_003828759.1| flagellar basal-body rod protein FlgG [Acetohalobium arabaticum DSM
           5501]
 gi|302205016|gb|ADL13694.1| flagellar basal-body rod protein FlgG [Acetohalobium arabaticum DSM
           5501]
          Length = 262

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV V+ E  +M    R Y  N + IK S  M+    +L R
Sbjct: 215 SQGYLEKGNVKVVEEMTNMIAAQRAYEVNSKAIKASDQMLQQANNLKR 262



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S   A +G+  Q   +  IS N+AN  T G       +++  ++F+++M+ S
Sbjct: 1  MIRSLWTAATGMKAQQLNIDTISNNLANVNTNG-------FKKSRVNFQDLMYQS 48


>gi|254500847|ref|ZP_05112998.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11]
 gi|222436918|gb|EEE43597.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11]
          Length = 260

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 78  DPGHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G+P  +  G      ++  NV+ + E AD+    R Y  N + I+ +  M +TT  +
Sbjct: 201 QTGNPNEDGYGSTQQFFLEMANVDAVTEIADLISAQRAYEMNSKVIQAADQMYSTTTQI 259



 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A +G+  Q   +++IS N+AN RTTG       Y+++   F+++++ +
Sbjct: 7  AATGMKAQEYNVEVISNNVANMRTTG-------YKKQRADFQDLLYQN 47


>gi|37525843|ref|NP_929187.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36785272|emb|CAE14213.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 260

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVN+  E  +M +T R Y  N + +  S  M+     L
Sbjct: 218 YVETSNVNIAEELVNMIQTQRAYEVNSKAVSTSDQMLQKLTQL 260



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAIFEDLLYQN 48


>gi|114330363|ref|YP_746585.1| flagellar basal body rod protein FlgG [Nitrosomonas eutropha C91]
 gi|114307377|gb|ABI58620.1| flagellar basal-body rod protein FlgG [Nitrosomonas eutropha C91]
          Length = 260

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N ++I+ S  M++    L
Sbjct: 216 QGFVETSNVNVVEELVEMIQTQRAYEINSRSIQTSDQMLSRLTQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S  I+ +GL  Q  +M +I+ N+AN  T G       ++R    FE++++ +
Sbjct: 1  MVRSLWISKTGLDAQQTKMDVIANNLANISTNG-------FKRMRPVFEDLLYQT 48


>gi|53717916|ref|YP_106902.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           K96243]
 gi|53724567|ref|YP_104800.1| flagellar basal body rod protein FlgG [Burkholderia mallei ATCC
           23344]
 gi|67641540|ref|ZP_00440317.1| flagellar basal-body rod protein FlgG [Burkholderia mallei GB8
           horse 4]
 gi|76808723|ref|YP_331881.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           1710b]
 gi|121598854|ref|YP_994293.1| flagellar basal body rod protein FlgG [Burkholderia mallei SAVP1]
 gi|124386502|ref|YP_001028058.1| flagellar basal body rod protein FlgG [Burkholderia mallei NCTC
           10229]
 gi|126439033|ref|YP_001057324.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           668]
 gi|126450732|ref|YP_001082865.1| flagellar basal body rod protein FlgG [Burkholderia mallei NCTC
           10247]
 gi|126454438|ref|YP_001064566.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           1106a]
 gi|134283616|ref|ZP_01770315.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           305]
 gi|167001539|ref|ZP_02267334.1| flagellar basal-body rod protein FlgG [Burkholderia mallei PRL-20]
 gi|167717662|ref|ZP_02400898.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           DM98]
 gi|167736705|ref|ZP_02409479.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           14]
 gi|167813804|ref|ZP_02445484.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           91]
 gi|167822320|ref|ZP_02453791.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei 9]
 gi|167843910|ref|ZP_02469418.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           B7210]
 gi|167892412|ref|ZP_02479814.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           7894]
 gi|167900910|ref|ZP_02488115.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           NCTC 13177]
 gi|167917166|ref|ZP_02504257.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           BCC215]
 gi|217425015|ref|ZP_03456511.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           576]
 gi|226199816|ref|ZP_03795367.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810463|ref|YP_002894914.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           MSHR346]
 gi|242317698|ref|ZP_04816714.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1106b]
 gi|254175110|ref|ZP_04881771.1| flagellar basal-body rod protein FlgG [Burkholderia mallei ATCC
           10399]
 gi|254182138|ref|ZP_04888735.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1655]
 gi|254196575|ref|ZP_04902999.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           S13]
 gi|254201898|ref|ZP_04908262.1| flagellar basal-body rod protein FlgG [Burkholderia mallei FMH]
 gi|254207232|ref|ZP_04913583.1| flagellar basal-body rod protein FlgG [Burkholderia mallei JHU]
 gi|254261052|ref|ZP_04952106.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1710a]
 gi|254295816|ref|ZP_04963273.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           406e]
 gi|254359734|ref|ZP_04976005.1| flagellar basal-body rod protein FlgG [Burkholderia mallei
           2002721280]
 gi|52208330|emb|CAH34263.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243]
 gi|52427990|gb|AAU48583.1| flagellar basal-body rod protein FlgG [Burkholderia mallei ATCC
           23344]
 gi|76578176|gb|ABA47651.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1710b]
 gi|121227664|gb|ABM50182.1| flagellar basal-body rod protein FlgG [Burkholderia mallei SAVP1]
 gi|124294522|gb|ABN03791.1| flagellar basal-body rod protein FlgG [Burkholderia mallei NCTC
           10229]
 gi|126218526|gb|ABN82032.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           668]
 gi|126228080|gb|ABN91620.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1106a]
 gi|126243602|gb|ABO06695.1| flagellar basal-body rod protein FlgG [Burkholderia mallei NCTC
           10247]
 gi|134245025|gb|EBA45120.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           305]
 gi|147747792|gb|EDK54868.1| flagellar basal-body rod protein FlgG [Burkholderia mallei FMH]
 gi|147752774|gb|EDK59840.1| flagellar basal-body rod protein FlgG [Burkholderia mallei JHU]
 gi|148028948|gb|EDK86880.1| flagellar basal-body rod protein FlgG [Burkholderia mallei
           2002721280]
 gi|157806194|gb|EDO83364.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           406e]
 gi|160696155|gb|EDP86125.1| flagellar basal-body rod protein FlgG [Burkholderia mallei ATCC
           10399]
 gi|169653318|gb|EDS86011.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           S13]
 gi|184212676|gb|EDU09719.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1655]
 gi|217392035|gb|EEC32061.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           576]
 gi|225928167|gb|EEH24203.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504504|gb|ACQ96822.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           MSHR346]
 gi|238522491|gb|EEP85935.1| flagellar basal-body rod protein FlgG [Burkholderia mallei GB8
           horse 4]
 gi|242140937|gb|EES27339.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1106b]
 gi|243062740|gb|EES44926.1| flagellar basal-body rod protein FlgG [Burkholderia mallei PRL-20]
 gi|254219741|gb|EET09125.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1710a]
          Length = 262

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   + R
Sbjct: 215 KQGYVESSNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQMSR 262



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|253998486|ref|YP_003050549.1| flagellar basal-body rod protein FlgG [Methylovorus sp. SIP3-4]
 gi|313200561|ref|YP_004039219.1| flagellar basal-body rod protein flgg [Methylovorus sp. MP688]
 gi|253985165|gb|ACT50022.1| flagellar basal-body rod protein FlgG [Methylovorus sp. SIP3-4]
 gi|312439877|gb|ADQ83983.1| flagellar basal-body rod protein FlgG [Methylovorus sp. MP688]
          Length = 260

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E   M +T R Y  N + I  S  M+     L
Sbjct: 216 QGYVETSNVNVVEELVSMIQTQRAYEINSKAITTSDQMLQRLSQL 260



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +GL  Q  +M +I+ N+AN  T G       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGLDAQQTQMDVIANNLANVSTNG-------FKRSRAVFEDLLYQN 48


>gi|90021853|ref|YP_527680.1| flagellar basal body rod protein FlgG [Saccharophagus degradans
           2-40]
 gi|89951453|gb|ABD81468.1| Flagellar basal-body rod FlgG [Saccharophagus degradans 2-40]
          Length = 261

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G+++  NV+++ E  +M  T R Y  N + +  S  M+ 
Sbjct: 215 KQGMLENSNVDIVEEMVNMITTQRAYEMNSKVVSTSDQMLQ 255



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + A+ +++ +GLA Q  R+  I+ N+ANA T G       ++R    FE++++ 
Sbjct: 1  MHAALYVSKTGLAAQDTRLTTIANNLANASTVG-------FKRDRAVFEDLLYQ 47


>gi|168335333|ref|ZP_02693429.1| hypothetical protein Epulo_09785 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 270

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NVN+  E  ++    R Y  N + I  +  M+   + L
Sbjct: 223 AGYLEGSNVNIATEMVNLIVAQRAYELNSKAISTADTMLGQAVQL 267



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A +G+  Q   +  IS NIAN  T G       +++++++F+ +++ +
Sbjct: 1  MMRSLWTAATGMTSQQTHVDTISNNIANVNTVG-------FKQESVNFKTLLYQN 48


>gi|167835113|ref|ZP_02461996.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           MSMB43]
          Length = 262

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   + R
Sbjct: 215 KQGYVESSNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQMSR 262



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|187926952|ref|YP_001893297.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12J]
 gi|241665281|ref|YP_002983640.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
 gi|187728706|gb|ACD29870.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12J]
 gi|240867308|gb|ACS64968.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
          Length = 260

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 80  GHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +P +N  G      V+  NVNV+ E  +M +T R Y  N ++++ S  M+     L
Sbjct: 204 ANPGSNGVGVLNQNYVETSNVNVVEEMVNMIQTQRAYEINSKSVQTSDQMLEKLSQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTG-------FKRSRAVFEDLLYQN 48


>gi|303248239|ref|ZP_07334502.1| flagellar basal-body rod protein FlgG [Desulfovibrio fructosovorans
           JJ]
 gi|302490377|gb|EFL50288.1| flagellar basal-body rod protein FlgG [Desulfovibrio fructosovorans
           JJ]
          Length = 260

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV ++ E   +    R Y AN + I  +  M+ T +++ R
Sbjct: 213 AQGYLEMSNVELVDEMVGLIVGQRAYEANSKAITTADGMLQTAVNVKR 260



 Score = 38.0 bits (88), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          ++ S   A +G+     ++  +S N+AN  T G       +++    FE++M+ +  V
Sbjct: 1  MMRSLWTATTGMVAMQMQIDTMSNNLANVNTVG-------FKKSRAEFEDLMYQTLQV 51


>gi|325295417|ref|YP_004281931.1| fagellar hook-basal body protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065865|gb|ADY73872.1| fagellar hook-basal body protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 568

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV++  E  ++    R Y AN + I     ++  T+++ R
Sbjct: 522 SGMLEMSNVDIASEFINLITAQRAYQANARVITTDDQILQETMNIKR 568



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A +GL      + +IS+NIAN  T G       ++++   FE+++  S
Sbjct: 1  MLQSFYTAFTGLNADKTWLSVISDNIANVNTVG-------FKKENAVFEDLLARS 48


>gi|325982369|ref|YP_004294771.1| flagellar basal-body rod protein FlgG [Nitrosomonas sp. AL212]
 gi|325531888|gb|ADZ26609.1| flagellar basal-body rod protein FlgG [Nitrosomonas sp. AL212]
          Length = 260

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G V+  NV+V+ E  +M +T R Y  N ++I+ S  M+     L
Sbjct: 215 DQGFVETSNVSVVEELVNMIQTQRAYEMNSKSIETSDQMLQKLAQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +GL  Q  ++ +I+ N+AN  T G       ++R    FE++M+ +
Sbjct: 1  MIRSLWISKTGLEAQQTKLDVIANNLANVNTNG-------FKRSRAVFEDLMYQT 48


>gi|309779449|ref|ZP_07674210.1| flagellar basal-body rod protein FlgG [Ralstonia sp. 5_7_47FAA]
 gi|308921690|gb|EFP67326.1| flagellar basal-body rod protein FlgG [Ralstonia sp. 5_7_47FAA]
          Length = 260

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 80  GHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +P +N  G      V+  NVNV+ E  +M +T R Y  N ++++ S  M+     L
Sbjct: 204 ANPGSNGVGALNQNYVETSNVNVVEEMVNMIQTQRAYEINSKSVQTSDQMLEKLSQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTG-------FKRSRAVFEDLLYQN 48


>gi|116328474|ref|YP_798194.1| endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116331206|ref|YP_800924.1| endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116121218|gb|ABJ79261.1| Endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116124895|gb|ABJ76166.1| Endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 287

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 5/66 (7%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           + + F  + +P        G ++  NV+V+ E  +M E NR Y AN +T++    ++   
Sbjct: 226 EPTPFELKDEPS----ILQGYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKL 281

Query: 129 L-DLLR 133
           + ++LR
Sbjct: 282 INEVLR 287



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          ++   +   +G+ +Q  RM +IS N+AN   T        ++R T  F+ 
Sbjct: 1  MLRGMYTGANGMIIQQTRMDVISNNLANVDKTA-------FKRDTTVFKT 43


>gi|322380502|ref|ZP_08054691.1| flagellar basal body rod protein FlgG [Helicobacter suis HS5]
 gi|321147069|gb|EFX41780.1| flagellar basal body rod protein FlgG [Helicobacter suis HS5]
          Length = 262

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)

Query: 84  ANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           AN+ G        ++  NV ++ E  D+    R Y AN +TI+ + +M+ T   L R
Sbjct: 206 ANSDGYGQLRQGFLELSNVRLVEEMTDLITAQRAYEANSKTIQTADNMLQTVNSLKR 262



 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 10/70 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S + A +G+  Q   +   S NIAN  T G       ++R+   F ++ + +    G
Sbjct: 1  MLRSLYSATTGMLGQQTHIDTTSNNIANVNTVG-------FKRQRADFNDLFYQALQYAG 53

Query: 61 VRVKKIGVDQ 70
                    
Sbjct: 54 TSTSDTTRSP 63


>gi|39998142|ref|NP_954093.1| flagellar basal body rod protein FlgG [Geobacter sulfurreducens
           PCA]
 gi|39985088|gb|AAR36443.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens
           PCA]
 gi|298507079|gb|ADI85802.1| flagellar basal body rod protein FlgG [Geobacter sulfurreducens
           KN400]
          Length = 262

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV+V+ E  +M    R Y  N + ++ + +M+    +L R
Sbjct: 215 AQGFLEMSNVSVMEEMVNMIVGQRAYEVNSKAVQAADEMLQQANNLRR 262



 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I +   A SG+  Q   + +++ N+AN  T G       +++    F+++M+ +
Sbjct: 1  MIRALWTAASGMQAQQTNIDVVANNLANVNTAG-------FKKSRADFQDLMYQN 48


>gi|254785374|ref|YP_003072803.1| flagellar basal body rod protein FlgG [Teredinibacter turnerae
           T7901]
 gi|237683455|gb|ACR10719.1| flagellar basal-body rod protein FlgG [Teredinibacter turnerae
           T7901]
          Length = 261

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G+++  NV+++ E  +M  T R Y  N + +  +  M+ 
Sbjct: 215 EQGMLENSNVDIVEEMVNMITTQRAYEMNSKIVSTADQMLQ 255



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + A+ +++ +GLA Q  ++  ++ N+ANA T G       ++R    FE++++ 
Sbjct: 1  MHAALYVSKTGLAAQDTKLTTVANNLANASTVG-------FKRDRAVFEDLLYQ 47


>gi|163782718|ref|ZP_02177714.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159881839|gb|EDP75347.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 262

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN++ E  ++    R Y  N + I  + +M++   +L R
Sbjct: 216 QGYLESSNVNIVEEMVNLIIAQRAYEFNTKGITAADEMLSQAANLRR 262



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 18/107 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           +  +   + SG+  Q   + +IS N+AN  T G       +++   +F+++++ +    G
Sbjct: 1   MFRALWTSASGMTAQQTNLDVISHNMANVNTIG-------FKKMRPTFQDLIYQTVREPG 53

Query: 61  VRVKKIGVDQSTFVE---EFDPGHPVANASGIVKYPNVNVLVETADM 104
                     S F      +     +A+  GI    N+N    T D+
Sbjct: 54  APTSPTTRSPSGFQIGLGTY-----IADTYGIFTQGNINQTGNTLDL 95


>gi|327398888|ref|YP_004339757.1| flagellar basal-body rod protein FlgG [Hippea maritima DSM 10411]
 gi|327181517|gb|AEA33698.1| flagellar basal-body rod protein FlgG [Hippea maritima DSM 10411]
          Length = 262

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 17/118 (14%)

Query: 23  QIISENIANARTTGDTPGSD--PYRRKTISFEEVMHGSGGVRVKKIG-----VDQSTFVE 75
             ++ NI N  T          P +   I     ++ +G   +K IG        ++   
Sbjct: 145 DTVAINIGNDGTVSVLEAGQQTPSQIGQIQLAYFVNPAG---LKAIGHNLYQETTASGTA 201

Query: 76  EFDPGHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             D  +P +N       G+++  NV+V+ E  +M    R Y  N + I+ S +M+ T 
Sbjct: 202 TVD--NPGSNGLGTLEQGVLEMSNVSVVQEMVEMIAAQRAYETNAKAIQTSDEMLQTA 257



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +I S   A +G+  Q   +  I+ N+AN  T G       ++R    FE++++ 
Sbjct: 1  MIRSLWTAATGMEAQQLNVDTIANNLANVNTVG-------FKRSRADFEDLLYQ 47


>gi|260222470|emb|CBA32066.1| Flagellar basal-body rod protein flgG [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 260

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A G V+  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 215 AQGFVETSNVNVVQELVTMIQTQRAYEMNSKAIQTSDQMLQKLGQL 260



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +G+  Q  ++ +IS N+AN  T G       +++    FE++M+ +
Sbjct: 1  MINSLWISKTGMEAQQMQLDVISNNLANVSTNG-------FKKSHAVFEDLMYQN 48


>gi|189426330|ref|YP_001953507.1| flagellar basal body rod protein FlgG [Geobacter lovleyi SZ]
 gi|189422589|gb|ACD96987.1| flagellar basal-body rod protein FlgG [Geobacter lovleyi SZ]
          Length = 262

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV+V  E  +M    R Y AN + I  S +M+    +L R
Sbjct: 216 QGFLEMSNVDVATEMVNMIIGQRAYEANSKAITTSDEMLQLANNLKR 262



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S   A SG+  Q+  + +I+ N+AN  TTG
Sbjct: 1  MMRSLWTAASGMNTQTQNINVIANNLANVNTTG 33


>gi|332800000|ref|YP_004461499.1| flagellar basal-body rod protein FlgG [Tepidanaerobacter sp. Re1]
 gi|332697735|gb|AEE92192.1| flagellar basal-body rod protein FlgG [Tepidanaerobacter sp. Re1]
          Length = 270

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E  ++    R Y  N + ++ S +M+    +L R
Sbjct: 224 QGFLEMSNVQVVEEMVNLIIAQRAYEVNTKAVQASDEMLAQANNLRR 270



 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A+SG+  Q   M I S N+AN  T G
Sbjct: 1  MMRALWSASSGMQAQQLNMDITSNNLANVNTAG 33


>gi|147678402|ref|YP_001212617.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
 gi|146274499|dbj|BAF60248.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
          Length = 264

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++ PNVNV+ E   +    R Y AN + I+   +++   ++
Sbjct: 215 QGYLEAPNVNVVDEMVSLITATRAYEANQRIIQSQDELLAKAVN 258


>gi|209549487|ref|YP_002281404.1| hypothetical protein Rleg2_1893 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535243|gb|ACI55178.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 101

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 32/126 (25%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           + A SG+  Q+ R+  I+ N+AN+ T+G       Y R   S   V   SGGV+      
Sbjct: 8   NTALSGMRAQTPRIGAIANNVANSSTSG-------YARLNTSLTSV--ASGGVQATV--- 55

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                        P A         +V+   E  D+ +  + Y AN    +   DM    
Sbjct: 56  ------------SPTA--------SDVDPATELTDLLQAEQSYKANAVVFETGADMWEML 95

Query: 129 LDLLRD 134
           + + RD
Sbjct: 96  MSIKRD 101


>gi|313672412|ref|YP_004050523.1| flagellar basal-body rod protein flgg [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939168|gb|ADR18360.1| flagellar basal-body rod protein FlgG [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 262

 Score = 60.3 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A GI++  NVNV  E  +M    R Y  N + I+ S +M+    +L R
Sbjct: 215 AQGILEMSNVNVAEEMVNMITGQRAYELNSKAIQTSDEMLQVVNNLKR 262



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 11/67 (16%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMHGSG 59
          +  +   A SG+  Q   +  I+ N+AN    G       +++  I FE    + M  +G
Sbjct: 1  MFRAMWTAASGMTAQQMNIDNIANNLANVNNIG-------FKKSRIHFEDLLYQEMRPAG 53

Query: 60 GVRVKKI 66
          G     I
Sbjct: 54 GPTAAGI 60


>gi|302037628|ref|YP_003797950.1| flagellar basal-body rod protein FlgG [Candidatus Nitrospira
           defluvii]
 gi|300605692|emb|CBK42025.1| Flagellar basal-body rod protein FlgG [Candidatus Nitrospira
           defluvii]
          Length = 263

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NVN+  E  +M    R Y  N +TI+ S +MM    +L R
Sbjct: 216 QQGFLESSNVNLAEEMVNMIIAQRSYEINSKTIQASDEMMQIANNLRR 263



 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +I +   A +G+  Q   +  I+ N+AN  T       + ++R    F ++++ 
Sbjct: 1  MIRAMWTAATGMTAQQLNVDTIANNLANVNT-------NAFKRSRAEFGDLLYQ 47


>gi|149927800|ref|ZP_01916051.1| flagellar basal body rod protein FlgG [Limnobacter sp. MED105]
 gi|149823422|gb|EDM82653.1| flagellar basal body rod protein FlgG [Limnobacter sp. MED105]
          Length = 260

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           + G V+  NVNV+ E   + +  R Y  N + I  S  M+     L
Sbjct: 215 SQGFVETSNVNVVEELVGLIQAQRAYEINSKAISTSDQMLQRLSQL 260



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S  IA +GL  Q  ++ +IS N+AN  T G       ++R    FE++++ +
Sbjct: 1  MMRSLWIAKTGLDAQQTQLDVISNNLANTATNG-------FKRSRAVFEDLLYQT 48


>gi|24214555|ref|NP_712036.1| endoflagellar distal basal body rod protein [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45657887|ref|YP_001973.1| hook protein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|24195518|gb|AAN49054.1| endoflagellar distal basal body rod protein [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45601128|gb|AAS70610.1| hook protein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
          Length = 287

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NV+V+ E  +M E NR Y AN +T++    ++   + ++LR
Sbjct: 240 QGYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEVLR 287



 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          ++   +   +G+ +Q  RM +IS N+AN   T        ++R T  F+ 
Sbjct: 1  MLRGIYTGANGMIIQQTRMDVISNNLANVDKTA-------FKRDTTIFKT 43


>gi|160901817|ref|YP_001567398.1| flagellar basal-body rod protein FlgG [Petrotoga mobilis SJ95]
 gi|160359461|gb|ABX31075.1| flagellar basal-body rod protein FlgG [Petrotoga mobilis SJ95]
          Length = 261

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A   G ++  NV+V+ E  DM    R Y  N +TI  + +M+ 
Sbjct: 212 ALQQGYLEKSNVDVVKEMVDMIVAQRAYDINSKTITTADEMLR 254



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A +G+  +  ++ IIS N+AN  TTG       Y+++   F+++++ S
Sbjct: 1  MLVSLYNAATGMNAEQRKLDIISNNLANVDTTG-------YKKQRAEFQDLLYSS 48


>gi|300716220|ref|YP_003741023.1| flagellar basal-body rod protein [Erwinia billingiae Eb661]
 gi|299062056|emb|CAX59172.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661]
          Length = 260

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E   M +T R Y  N + I  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVSMIQTQRAYEINSKAISTSDQMLAKLTQL 260



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMYQT 48


>gi|78221652|ref|YP_383399.1| flagellar basal body rod protein FlgG [Geobacter metallireducens
           GS-15]
 gi|78192907|gb|ABB30674.1| Flagellar basal-body rod FlgG [Geobacter metallireducens GS-15]
          Length = 262

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV+V+ E  +M    R Y  N + ++ + +M+ T   L R
Sbjct: 215 AQGFLEMSNVSVMEEMVNMITGQRAYEVNSKAVQTADEMLQTANSLKR 262



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I +   A SG+  Q   + +++ N+AN  T G       +++    F+++M+ +
Sbjct: 1  MIRALWTAASGMQAQQTNIDVVANNLANVNTAG-------FKKSRADFQDLMYQN 48


>gi|242238971|ref|YP_002987152.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech703]
 gi|242131028|gb|ACS85330.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech703]
          Length = 260

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 19/45 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E   M +  R Y  N + +  S  M+     +
Sbjct: 216 QGYVETSNVNVAEELVSMIQVQRAYEINSKAVSTSDSMLQRLTQI 260



 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|317153861|ref|YP_004121909.1| flagellar basal body rod protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316944112|gb|ADU63163.1| flagellar basal body rod protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 108

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 19/120 (15%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           S L+  S   Q+ + NIAN  T G       +   +++ E       GVRV  I      
Sbjct: 7   SALSALSTVQQVSANNIANVNTDG-------FSASSVTLESGP-ADQGVRVGSIRESSVP 58

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                          G V+  N ++  E   M  T   + AN+  ++ S DM    L+++
Sbjct: 59  GPNI-----------GGVEGSNTDIGTEMVGMIRTGHAFSANVAAVRASEDMTGHLLNMI 107


>gi|268317781|ref|YP_003291500.1| flagellar basal-body rod protein FlgG [Rhodothermus marinus DSM
           4252]
 gi|262335315|gb|ACY49112.1| flagellar basal-body rod protein FlgG [Rhodothermus marinus DSM
           4252]
          Length = 262

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV+V+ E  ++    R Y  N + +  + +M+ T   + R
Sbjct: 215 KQGFLEAANVDVVQEMVNLITAQRAYEINSKMVTTTEEMLQTASQMKR 262



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +   A  G+  Q   +  I+ N+ANA TTG       ++   + F+++++ +
Sbjct: 1  MLRALRTAALGMNAQQTNVDNIAHNLANANTTG-------FKNARVVFQDLLYQT 48


>gi|91794993|ref|YP_564644.1| flagellar basal-body rod FlgG [Shewanella denitrificans OS217]
 gi|91716995|gb|ABE56921.1| Flagellar basal-body rod FlgG [Shewanella denitrificans OS217]
          Length = 261

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV V+ +  DQ+                G ++  NVNV+ E  +M  T R Y  N +
Sbjct: 196 AASGVAVEGVAGDQALGGLR----------QGSLEGSNVNVVEEMVEMISTQRAYEMNAK 245

Query: 117 TIKQSHDMM 125
            +  S DM+
Sbjct: 246 VVSASDDML 254



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +GLA Q  +M  I+ N+AN  TTG       ++R  ++F ++        G
Sbjct: 1  MQSALWVSKTGLAAQDTKMTTIANNLANVNTTG-------FKRDRVAFNDLFYQVQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V ++    S    
Sbjct: 54 GQVDELNQLPSGLQL 68


>gi|297183134|gb|ADI19277.1| flagellar basal body rod protein [uncultured delta proteobacterium
           HF0200_39L23]
          Length = 262

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 80  GHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             P AN+      G ++  NV+++ E  +M  + R Y  N + I+ + +M+  T +L+R
Sbjct: 204 DAPGANSMGSLTQGFLERSNVSLVEEMVNMITSQRAYEVNSKAIQSADEMLKNTNNLVR 262



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 9/73 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A +G+A Q   +   + N+AN  T+G       Y++  + F+++++ +   R 
Sbjct: 1  MMRALYTAATGMAAQQRNIDTTANNLANVNTSG-------YKKSKVHFQDLLYHNE--RT 51

Query: 64 KKIGVDQSTFVEE 76
            +    ST V  
Sbjct: 52 AGVPSSVSTQVPV 64


>gi|255322391|ref|ZP_05363537.1| flagellar basal-body rod protein FlgG [Campylobacter showae RM3277]
 gi|255300764|gb|EET80035.1| flagellar basal-body rod protein FlgG [Campylobacter showae RM3277]
          Length = 262

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G V+  NV ++ E  D+    R Y AN + I  S DM++
Sbjct: 216 QGFVEMSNVQLVEEMTDLITGQRAYEANSKAITTSDDMLS 255



 Score = 41.5 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ S + A +G+  Q  ++ + S NIAN  T G       Y++    F ++M+ 
Sbjct: 1  MMRSIYSAATGMIAQQTQIDVTSHNIANVNTIG-------YKKNRAEFADLMYQ 47


>gi|78357998|ref|YP_389447.1| flagellar basal-body rod protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220403|gb|ABB39752.1| flagellar basal-body rod protein, putative [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 125

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 27/129 (20%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG---VDQ 70
            L   S R  + ++NIANA T G       +R + +  E       GV+V  I      Q
Sbjct: 9   ALNAFSMRQAVTADNIANASTDG-------FRSREVVLETGPQDQ-GVQVADIRRRQESQ 60

Query: 71  STFVEEFDPG---------HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +      +            P A +         +++ E+  M E  R Y AN   I+  
Sbjct: 61  AMDELRREQALNAETHGAQEPAAPSD-------TDLVRESVTMMENQRAYEANAAAIRAQ 113

Query: 122 HDMMTTTLD 130
            +M  T +D
Sbjct: 114 DEMTGTFID 122


>gi|319790416|ref|YP_004152049.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1]
 gi|317114918|gb|ADU97408.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1]
          Length = 522

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV++  E  ++    R Y AN + I     ++  T+++ R
Sbjct: 476 SGMLEMSNVDIANEFINLITAQRSYQANARVITTDDQILQETMNIKR 522



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 24/103 (23%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          ++ S + A +GL      + IIS+NIAN  T G       ++ +   FE+++  S     
Sbjct: 1  MLQSFYTAFTGLTADKRWLSIISDNIANVNTVG-------FKAERAVFEDLLARSLTTFK 53

Query: 59 ----------GGVRVKKIGVD--QSTFVEEFDPGHPVANASGI 89
                    GGV V     D  Q TF+   +P     +  G 
Sbjct: 54 NGAPVNTEIGGGVFVSATVKDFSQGTFMNTNNPLDLALDGEGF 96


>gi|134300239|ref|YP_001113735.1| hypothetical protein Dred_2400 [Desulfotomaculum reducens MI-1]
 gi|134052939|gb|ABO50910.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum reducens MI-1]
          Length = 856

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M  T R Y AN + I  S  ++   + L R
Sbjct: 810 SGYLEMSNVDLTEEFTNMITTQRGYQANARVITVSDSLLEELIQLKR 856



 Score = 41.5 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 9/59 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS 71
          SG+     RM +   NIAN  T G       Y+   ++F++ +  S  VR    G + +
Sbjct: 10 SGMRNHQTRMDVTGNNIANVNTNG-------YKSSRVNFQDTL--SQTVRSAGNGTNPA 59


>gi|323703191|ref|ZP_08114844.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
           574]
 gi|323531850|gb|EGB21736.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
           574]
          Length = 260

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  NV++  E   M E  R Y AN +TI+ + +M     +L
Sbjct: 214 QGYLERSNVDLAQEMLGMIEAQRAYAANARTIQTADEMWDRANNL 258



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 19/106 (17%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I +     SG+     ++  I  NIAN  TT        Y+R  I F E+M  + G + 
Sbjct: 2   IIKTLATGASGMRAFQMKLDTIGNNIANINTTA-------YKRSRIEFAEMMRQAMGDQG 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                D              A  SG VK  +V  LVE  D+ +T R
Sbjct: 55  IPAASDPRP-----------AGGSG-VKMVSVARLVEQGDLLQTGR 88


>gi|114799186|ref|YP_758987.1| flagellar basal body rod protein FlgG [Hyphomonas neptunium ATCC
          15444]
 gi|114739360|gb|ABI77485.1| flagellar basal-body rod protein FlgG [Hyphomonas neptunium ATCC
          15444]
          Length = 261

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + S  IA SG+A Q  R+++IS NIAN  TT        YR +T  F ++M+  
Sbjct: 1  MKSLQIAASGMAAQQMRVEVISNNIANMSTTA-------YRPRTAEFSDLMYQQ 47



 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++   V+V+ E AD+ E  R Y  N + I  S +M++ T  L
Sbjct: 216 QGYIEDSAVDVVKEIADLIEAQRGYELNSKVITASDEMLSVTTRL 260


>gi|147678415|ref|YP_001212630.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
 gi|146274512|dbj|BAF60261.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
          Length = 269

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M  T R Y AN +TI  +  M+   L L R
Sbjct: 223 SGYLEMSNVDLTDEFTNMISTQRGYQANARTITVTDQMIEELLALKR 269



 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISF-EEVMHGSG 59
          ++ S +   SGL     RM +I  NIAN  T G       ++    +TI F       +G
Sbjct: 1  MLRSLYAGASGLRSHQTRMDVIGNNIANVNTIGFKGSRANFQDVLYQTIRFGSAGSDNTG 60

Query: 60 GVRVKKIG 67
          GV   ++G
Sbjct: 61 GVNKSQVG 68


>gi|291280520|ref|YP_003497355.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans
           SSM1]
 gi|290755222|dbj|BAI81599.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans
           SSM1]
          Length = 262

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A GI++  NVNV+ E  ++    R Y  N + I+   +M+    +L R
Sbjct: 215 AQGILEMSNVNVVEEMVNLITGQRAYEINSKAIQTGDEMLQIVNNLKR 262



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 11/67 (16%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMHGSG 59
          ++ +   A SG+  Q   +  IS N+AN  T G       +++  ++FE    + +  +G
Sbjct: 1  MLRTLWTAASGMTTQQINIDNISNNLANVNTAG-------FKKSRVNFEDLLYQELKPAG 53

Query: 60 GVRVKKI 66
          GV    I
Sbjct: 54 GVTAAGI 60


>gi|239834442|ref|ZP_04682770.1| flagellar basal body rod protein FlgG [Ochrobactrum intermedium LMG
           3301]
 gi|239822505|gb|EEQ94074.1| flagellar basal body rod protein FlgG [Ochrobactrum intermedium LMG
           3301]
          Length = 226

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+ + E  D+    R Y  N + I+ + +M 
Sbjct: 179 KQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAADEMA 218


>gi|315185553|gb|EFU19322.1| fagellar hook-basal body protein [Spirochaeta thermophila DSM 6578]
          Length = 269

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E   M E NR Y AN +TI+    ++   ++
Sbjct: 221 QGFLEGSNVNPVTEMVQMIEVNRAYEANQKTIETQDSLLGRLIN 264



 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 7/39 (17%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          +A Q  RM  I+ N+AN   TG       Y+R T  F+ 
Sbjct: 1  MASQLNRMDAIANNLANVDLTG-------YKRDTAIFKA 32


>gi|320354342|ref|YP_004195681.1| flagellar basal-body rod protein FlgG [Desulfobulbus propionicus
           DSM 2032]
 gi|320122844|gb|ADW18390.1| flagellar basal-body rod protein FlgG [Desulfobulbus propionicus
           DSM 2032]
          Length = 260

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVN++ E   M  T R +  N   I  S +MM T  ++
Sbjct: 215 QGYVENSNVNLVEEMTHMITTQRAFEINSNVITTSDEMMQTVTNM 259



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 7/69 (10%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + S   + +G++ Q+  M +I+ N+AN  TTG       +++    F+++++    V   
Sbjct: 1  MRSLWTSTTGMSAQNLNMDVIANNLANVSTTG-------FKKSRADFQDLLYQIMKVPGS 53

Query: 65 KIGVDQSTF 73
              D  + 
Sbjct: 54 PTSADTRSP 62


>gi|163856437|ref|YP_001630735.1| flagellar basal body rod protein FlgG [Bordetella petrii DSM 12804]
 gi|163260165|emb|CAP42467.1| flagellar basal-body rod protein FlgG [Bordetella petrii]
          Length = 261

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV  E  +M  T R Y  N + +K S +M+     L
Sbjct: 219 YVETSNVNVAEELVNMITTQRAYEMNSKAVKTSDEMLARLTQL 261



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 10/65 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S  IA +GL  Q   M +IS N+AN +T G       ++R    F+++M+ +    G
Sbjct: 1  MMRSLWIAKTGLEGQQTSMDVISNNLANVQTNG-------FKRGRAIFQDLMYQTLRQPG 53

Query: 61 VRVKK 65
           +V  
Sbjct: 54 AQVGD 58


>gi|297182936|gb|ADI19085.1| flagellar basal body rod protein [uncultured delta proteobacterium
           HF0070_15B21]
          Length = 262

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV+++ E  +M  + R Y  N + I+ + +M+  T +L+R
Sbjct: 216 QGFLERSNVSLVEEMVNMITSQRAYEVNSKAIQSADEMLKNTNNLVR 262



 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 9/73 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A +G+A Q   +   + N+AN  TTG       Y++  + F+++++ +   R 
Sbjct: 1  MMRALYTAATGMAAQQRNIDTTANNLANVNTTG-------YKKSKVHFQDLLYHNE--RT 51

Query: 64 KKIGVDQSTFVEE 76
            +    ST V  
Sbjct: 52 AGVPSSVSTQVPV 64


>gi|261840277|gb|ACY00043.1| flagellar basal body rod protein FlgG [Helicobacter pylori 52]
          Length = 262

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E  D+    R Y AN ++I+ +  M+ T   L R
Sbjct: 216 QGFLELSNVRLVEEMTDLITAQRAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S + A SG+  Q   +   S NIAN  TTG
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTG 33


>gi|308185371|ref|YP_003929504.1| flagellar basal body rod protein FlgG [Helicobacter pylori SJM180]
 gi|308061291|gb|ADO03187.1| flagellar basal body rod protein FlgG [Helicobacter pylori SJM180]
          Length = 262

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E  D+    R Y AN ++I+ +  M+ T   L R
Sbjct: 216 QGFLELSNVKLVEEMTDLITAQRAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S + A SG+  Q   +   S NIAN  TTG
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTG 33


>gi|223040682|ref|ZP_03610951.1| flagellar basal-body rod protein FlgG [Campylobacter rectus RM3267]
 gi|222878046|gb|EEF13158.1| flagellar basal-body rod protein FlgG [Campylobacter rectus RM3267]
          Length = 262

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G V+  NV ++ E  D+    R Y AN + I  S DM++
Sbjct: 216 QGFVEMSNVQLVEEMTDLITGQRAYEANSKAITTSDDMLS 255



 Score = 41.5 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ S + A +G+  Q  ++ + S NIAN  T G       Y++    F ++M+ 
Sbjct: 1  MMRSIYSAATGMIAQQTQIDVTSHNIANVNTIG-------YKKNRAEFADLMYQ 47


>gi|186477699|ref|YP_001859169.1| flagellar basal body rod protein FlgG [Burkholderia phymatum
           STM815]
 gi|184194158|gb|ACC72123.1| flagellar basal-body rod protein FlgG [Burkholderia phymatum
           STM815]
          Length = 262

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTLSQM 260



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M  IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDTISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|259908810|ref|YP_002649166.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
 gi|224964432|emb|CAX55941.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
 gi|283478792|emb|CAY74708.1| Flagellar basal-body rod protein flgG [Erwinia pyrifoliae DSM
           12163]
 gi|310767292|gb|ADP12242.1| Flagellar basal-body rod protein [Erwinia sp. Ejp617]
          Length = 260

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 78  DPGHPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +PG+  A     G V+  NVNV  E   M +T R Y  N + I  S  M+     +
Sbjct: 205 NPGNNGAGTLYQGYVETSNVNVAEELVSMIQTQRAYEINSKAISTSDQMLAKLTQI 260



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++M+ +
Sbjct: 1  MIRSLWIAKTGLDGQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLMYQT 48


>gi|157165544|ref|YP_001467096.1| flagellar basal body rod protein FlgG [Campylobacter concisus
           13826]
 gi|112799947|gb|EAT97291.1| flagellar basal-body rod protein FlgG [Campylobacter concisus
           13826]
          Length = 262

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G V+  NV ++ E  D+    R Y AN + I  S  M+
Sbjct: 216 QGFVEMSNVQLVEEMTDLITGQRAYEANSKAITTSDSML 254



 Score = 40.7 bits (95), Expect = 0.076,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ S + A +G+  +  ++ + S NIAN  T G       Y++    F ++M+ 
Sbjct: 1  MMRSLYTAATGMIAEQTQIDVTSHNIANVNTYG-------YKKNRAEFADLMYQ 47


>gi|15612557|ref|NP_224210.1| flagellar basal body rod protein FlgG [Helicobacter pylori J99]
 gi|4156115|gb|AAD07066.1| FLAGELLAR BASAL-BODY ROD PROTEIN (DISTAL ROD PROTEIN) [Helicobacter
           pylori J99]
 gi|317015022|gb|ADU82458.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           Gambia94/24]
          Length = 262

 Score = 59.6 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E  D+    R Y AN ++I+ +  M+ T   L R
Sbjct: 216 QGFLELSNVRLVEEMTDLITAQRAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S + A SG+  Q   +   S NIAN  TTG
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTG 33


>gi|71906393|ref|YP_283980.1| flagellar basal body rod protein FlgG [Dechloromonas aromatica RCB]
 gi|71846014|gb|AAZ45510.1| Protein of unknown function DUF1078 [Dechloromonas aromatica RCB]
          Length = 260

 Score = 59.6 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E   M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVTMIQTQRAYELNSKVVSTSDAMLGRLTQL 260



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q  ++ +IS N+AN  T G       ++R    FE++++ +
Sbjct: 1  MIRSLWIARTGLDAQQTQLDVISNNLANVSTNG-------FKRSRAVFEDLLYQT 48


>gi|15646192|ref|NP_208376.1| flagellar basal body rod protein FlgG [Helicobacter pylori 26695]
 gi|188528376|ref|YP_001911063.1| flagellar basal body rod protein FlgG [Helicobacter pylori Shi470]
 gi|217033804|ref|ZP_03439229.1| hypothetical protein HP9810_877g8 [Helicobacter pylori 98-10]
 gi|308183740|ref|YP_003927867.1| flagellar basal body rod protein FlgG [Helicobacter pylori PeCan4]
 gi|2314768|gb|AAD08623.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori 26695]
 gi|188144616|gb|ACD49033.1| flagellar basal body rod protein FlgG [Helicobacter pylori Shi470]
 gi|216943702|gb|EEC23145.1| hypothetical protein HP9810_877g8 [Helicobacter pylori 98-10]
 gi|261838871|gb|ACX98637.1| flagellar basal-body rod protein [Helicobacter pylori 51]
 gi|297380761|gb|ADI35648.1| flagellar basal-body rod protein FlgG [Helicobacter pylori v225d]
 gi|308062867|gb|ADO04755.1| flagellar basal body rod protein FlgG [Helicobacter pylori Cuz20]
 gi|308064367|gb|ADO06254.1| flagellar basal body rod protein FlgG [Helicobacter pylori Sat464]
 gi|308065925|gb|ADO07817.1| flagellar basal body rod protein FlgG [Helicobacter pylori PeCan4]
 gi|315585990|gb|ADU40371.1| flagellar basal-body rod protein FlgG [Helicobacter pylori 35A]
 gi|317178306|dbj|BAJ56095.1| flagellar basal body rod protein FlgG [Helicobacter pylori F16]
 gi|317179787|dbj|BAJ57575.1| flagellar basal body rod protein FlgG [Helicobacter pylori F30]
 gi|317181286|dbj|BAJ59072.1| flagellar basal body rod protein FlgG [Helicobacter pylori F32]
 gi|317182809|dbj|BAJ60593.1| flagellar basal body rod protein FlgG [Helicobacter pylori F57]
 gi|332674396|gb|AEE71213.1| flagellar basal-body rod protein FlgG [Helicobacter pylori 83]
          Length = 262

 Score = 59.6 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E  D+    R Y AN ++I+ +  M+ T   L R
Sbjct: 216 QGFLELSNVRLVEEMTDLITAQRAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S + A SG+  Q   +   S NIAN  TTG
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTG 33


>gi|325529016|gb|EGD06029.1| flagellar basal body rod protein FlgG [Burkholderia sp. TJI49]
          Length = 262

 Score = 59.6 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQM 260



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 20/31 (64%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANART 34
          +  S +IA +G+  Q A+M +IS N+AN  T
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVST 31


>gi|221199741|ref|ZP_03572784.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD2M]
 gi|221208654|ref|ZP_03581654.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD2]
 gi|221171465|gb|EEE03912.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD2]
 gi|221179980|gb|EEE12384.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD2M]
          Length = 262

 Score = 59.6 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQM 260



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|108563958|ref|YP_628274.1| flagellar basal body rod protein FlgG [Helicobacter pylori HPAG1]
 gi|207092034|ref|ZP_03239821.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           HPKX_438_AG0C1]
 gi|208435465|ref|YP_002267131.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|210135763|ref|YP_002302202.1| flagellar basal body rod protein FlgG [Helicobacter pylori P12]
 gi|217031740|ref|ZP_03437244.1| hypothetical protein HPB128_155g53 [Helicobacter pylori B128]
 gi|254780116|ref|YP_003058223.1| flagellar basal body rod protein FlgG [Helicobacter pylori B38]
 gi|298737122|ref|YP_003729652.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8]
 gi|107837731|gb|ABF85600.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
 gi|208433394|gb|ACI28265.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|210133731|gb|ACJ08722.1| flagellar basal-body rod protein [Helicobacter pylori P12]
 gi|216946587|gb|EEC25187.1| hypothetical protein HPB128_155g53 [Helicobacter pylori B128]
 gi|254002029|emb|CAX30288.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Helicobacter pylori B38]
 gi|298356316|emb|CBI67188.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8]
 gi|307638271|gb|ADN80721.1| Flagellar basal-body rod protein [Helicobacter pylori 908]
 gi|317010275|gb|ADU80855.1| flagellar basal body rod protein FlgG [Helicobacter pylori India7]
 gi|317011821|gb|ADU85568.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           SouthAfrica7]
 gi|325996863|gb|ADZ52268.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
 gi|325998456|gb|ADZ50664.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
          Length = 262

 Score = 59.6 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E  D+    R Y AN ++I+ +  M+ T   L R
Sbjct: 216 QGFLELSNVRLVEEMTDLITAQRAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S + A SG+  Q   +   S NIAN  TTG
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTG 33


>gi|163744349|ref|ZP_02151709.1| flagellar basal-body rod protein FlgG [Oceanibulbus indolifex
           HEL-45]
 gi|161381167|gb|EDQ05576.1| flagellar basal-body rod protein FlgG [Oceanibulbus indolifex
           HEL-45]
          Length = 261

 Score = 59.6 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 75  EEFDPGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  +PG P A     G ++  NVNV+ +  D+    R Y  N ++I+ +  M++    +
Sbjct: 202 QVVNPGDPGAGMIRQGYLEASNVNVIQQITDLISAQRAYEMNSKSIETADQMLSAANQI 260



 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   + +IS NIANA TTG       ++    +F+++++ S
Sbjct: 1  MKALSIAATGMMAQQTNVDVISNNIANANTTG-------FKASRAAFQDLIYQS 47


>gi|307293785|ref|ZP_07573629.1| flagellar basal-body rod protein FlgG [Sphingobium chlorophenolicum
           L-1]
 gi|306879936|gb|EFN11153.1| flagellar basal-body rod protein FlgG [Sphingobium chlorophenolicum
           L-1]
          Length = 262

 Score = 59.6 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           SG ++  NVNV+ E  DM ET R Y  N + IK + +M+ 
Sbjct: 217 SGYLETSNVNVVEELVDMIETQRAYEVNSKMIKATDEMLQ 256



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A+ H+A +GL  Q+ +M++I+ N+AN  TT        ++R    FE + +  
Sbjct: 4  AALHVARTGLDAQNTKMRVIANNLANVNTTA-------FKRDRADFETLAYQQ 49


>gi|220903671|ref|YP_002478983.1| flagellar basal body rod protein FlgG [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219867970|gb|ACL48305.1| flagellar basal-body rod protein FlgG [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 261

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV V+ E  +M    R Y  N ++I+ S  M+   + L R
Sbjct: 213 AQGFLEMSNVEVVDEMVNMIVGQRAYEVNSKSIQTSDSMLGIAVQLKR 260



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S     +G+  Q   + +IS N+AN  TTG       +++    FE++M+ +
Sbjct: 1  MMRSLWTGATGMVAQQLNIDVISNNLANVNTTG-------FKKSRAEFEDLMYQT 48


>gi|109946869|ref|YP_664097.1| flagellar basal body rod protein FlgG [Helicobacter acinonychis
           str. Sheeba]
 gi|109714090|emb|CAJ99098.1| flagellar basal-body rod protein FlgG [Helicobacter acinonychis
           str. Sheeba]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E  D+    R Y AN ++I+ +  M+ T   L R
Sbjct: 216 QGFLELSNVRLVEEMTDLITAQRAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S + A SG+  Q   +   S NIAN  TTG
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTG 33


>gi|294013088|ref|YP_003546548.1| flagellar basal-body rod protein FlgG [Sphingobium japonicum UT26S]
 gi|292676418|dbj|BAI97936.1| flagellar basal-body rod protein FlgG [Sphingobium japonicum UT26S]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 24/40 (60%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +G ++  NVNV+ E  DM ET R Y  N + IK + +M+ 
Sbjct: 217 AGYLETSNVNVVEELVDMIETQRAYEVNSKMIKATDEMLQ 256



 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A+ H+A +GL  Q+ +M++I+ N+AN  TTG       ++R    FE + +  
Sbjct: 4  AALHVARTGLDAQNTKMRVIANNLANVNTTG-------FKRDRADFETLAYQQ 49


>gi|332531620|ref|ZP_08407517.1| flagellar basal-body rod FlgG [Hylemonella gracilis ATCC 19624]
 gi|332038983|gb|EGI75412.1| flagellar basal-body rod FlgG [Hylemonella gracilis ATCC 19624]
          Length = 259

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 78  DPGHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           + G P AN       G ++  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 201 NTGAPSANGIGKLMQGYLESSNVNVVQELVTMIQTQRAYEMNSKAIQTSDQMLQKLGQL 259



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S  IA +G+  Q  ++  IS N+AN+ T G       ++R ++ FE++M+ +
Sbjct: 1  MFNSLWIAKTGMEAQQRQLDTISNNLANSSTNG-------FKRSSVVFEDLMYQN 48


>gi|161526184|ref|YP_001581196.1| flagellar basal body rod protein FlgG [Burkholderia multivorans
           ATCC 17616]
 gi|189349100|ref|YP_001944728.1| flagellar basal body rod protein FlgG [Burkholderia multivorans
           ATCC 17616]
 gi|221215573|ref|ZP_03588536.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD1]
 gi|160343613|gb|ABX16699.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           ATCC 17616]
 gi|189333122|dbj|BAG42192.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
           17616]
 gi|221164561|gb|EED97044.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD1]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQM 260



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|322421662|ref|YP_004200885.1| flagellar basal-body rod protein FlgG [Geobacter sp. M18]
 gi|320128049|gb|ADW15609.1| flagellar basal-body rod protein FlgG [Geobacter sp. M18]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV+V+ E   M  + R Y  N + I+ S DM+     L R
Sbjct: 215 EQGYIEQSNVSVMEEMVSMIVSQRAYEINSKAIQASDDMLQQAAALKR 262



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I +   A SG+  Q   + +++ N+AN+ TTG       +++    F+++M+ +
Sbjct: 1  MIRALWTAASGMQAQQLNIDVVANNLANSSTTG-------FKKSRADFQDLMYQT 48


>gi|46578723|ref|YP_009531.1| flagella basal body rod domain-containing protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120603713|ref|YP_968113.1| hypothetical protein Dvul_2674 [Desulfovibrio vulgaris DP4]
 gi|46448135|gb|AAS94790.1| flagella basal body rod domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563942|gb|ABM29686.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris DP4]
 gi|311232595|gb|ADP85449.1| flagellar hook-basal body protein [Desulfovibrio vulgaris RCH1]
          Length = 498

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  +M  T R +  N + +  +  M+   L+L R
Sbjct: 456 EQSNVDMAREMVNMIVTQRGFQTNSKVVTTADTMIQKALELKR 498



 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++   +   +G+  Q+  M ++  N+AN  T G
Sbjct: 1  MMHGLYTGATGMRTQAEGMNVVGNNLANVNTIG 33


>gi|116691038|ref|YP_836661.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia
           HI2424]
 gi|170734372|ref|YP_001766319.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia
           MC0-3]
 gi|254246967|ref|ZP_04940288.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184]
 gi|116649127|gb|ABK09768.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia
           HI2424]
 gi|124871743|gb|EAY63459.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184]
 gi|169817614|gb|ACA92197.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia
           MC0-3]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQM 260



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANTSTNG-------FKASRAVFEDLLYQT 48


>gi|294853175|ref|ZP_06793847.1| flagellar basal-body rod protein FlgG [Brucella sp. NVSL 07-0026]
 gi|294818830|gb|EFG35830.1| flagellar basal-body rod protein FlgG [Brucella sp. NVSL 07-0026]
          Length = 210

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+ + E  D+    R Y  N + I+ + +M 
Sbjct: 163 KQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAADEMA 202


>gi|317013400|gb|ADU84008.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           Lithuania75]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E  D+    R Y AN ++I+ +  M+ T   L R
Sbjct: 216 QGFLELSNVRLVEEMTDLITAQRAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S + A SG+  Q   +   S NIAN  TTG
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTG 33


>gi|134297196|ref|YP_001120931.1| flagellar basal body rod protein FlgG [Burkholderia vietnamiensis
           G4]
 gi|134140353|gb|ABO56096.1| flagellar basal-body rod protein FlgG [Burkholderia vietnamiensis
           G4]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQM 260



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANTSTNG-------FKASRAVFEDLLYQT 48


>gi|94495409|ref|ZP_01301989.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
 gi|94424797|gb|EAT09818.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 24/40 (60%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           SG ++  NVN++ E  DM ET R Y  N + IK + +M+ 
Sbjct: 217 SGYLETSNVNIVEELVDMIETQRAYEVNSKMIKATDEMLQ 256



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/31 (45%), Positives = 23/31 (74%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTG 36
          A+ H+A +GL  Q+ +M++I+ N+AN  TTG
Sbjct: 4  AALHVARTGLDAQNTKMRVIANNLANVNTTG 34


>gi|188534168|ref|YP_001907965.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
 gi|188029210|emb|CAO97082.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
          Length = 260

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 78  DPGHPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +PG+  A     G V+  NVNV  E   M +T R Y  N + I  S  M+     +
Sbjct: 205 NPGNNGAGTLYQGYVETSNVNVAEELVSMIQTQRAYEINSKAISTSDQMLAKLTQI 260



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++M+ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLMYQT 48


>gi|115353116|ref|YP_774955.1| flagellar basal body rod protein FlgG [Burkholderia ambifaria AMMD]
 gi|170703098|ref|ZP_02893918.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           IOP40-10]
 gi|171321840|ref|ZP_02910741.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           MEX-5]
 gi|172061970|ref|YP_001809622.1| flagellar basal body rod protein FlgG [Burkholderia ambifaria
           MC40-6]
 gi|115283104|gb|ABI88621.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria AMMD]
 gi|170131995|gb|EDT00503.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           IOP40-10]
 gi|171092878|gb|EDT38130.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           MEX-5]
 gi|171994487|gb|ACB65406.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           MC40-6]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQM 260



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANTSTNG-------FKASRAVFEDLLYQT 48


>gi|206558970|ref|YP_002229730.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia
           J2315]
 gi|198035007|emb|CAR50879.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Burkholderia cenocepacia J2315]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQM 260



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANTSTNG-------FKASRAVFEDLLYQT 48


>gi|32266580|ref|NP_860612.1| flagellar basal body rod protein FlgG [Helicobacter hepaticus ATCC
           51449]
 gi|32262631|gb|AAP77678.1| flagellar distal rod protein FlgG [Helicobacter hepaticus ATCC
           51449]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E  D+    R Y AN +TI+ +  M+ T   L R
Sbjct: 216 QGFLELSNVKLVEEMTDLITGQRAYEANSKTIQTADSMLQTVNGLKR 262



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 29/111 (26%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
          ++ S + A++G+  Q  ++   S NIAN  TTG       Y+++   F ++ +       
Sbjct: 1  MMRSLYTASTGMLGQQLQIDNTSNNIANVNTTG-------YKKQRAEFADLFYQVLQYAG 53

Query: 57 --------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
                     G+ V  IGV      + F  GHP    +      N+++ +
Sbjct: 54 TSTSETTISPTGIEV-GIGVRPVAIQKMFSQGHPKETEN------NLDIAI 97


>gi|107023951|ref|YP_622278.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia AU
           1054]
 gi|105894140|gb|ABF77305.1| Flagellar basal-body rod FlgG [Burkholderia cenocepacia AU 1054]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQM 260



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAAAGMNAQQAQMDVISNNLANTSTNG-------FKASRAVFEDLLYQT 48


>gi|30248324|ref|NP_840394.1| flagellar basal body rod protein FlgG [Nitrosomonas europaea ATCC
           19718]
 gi|30138210|emb|CAD84218.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 260

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N ++I  S  M+     L
Sbjct: 216 QGFVETSNVNVVEELVEMIQTQRAYEINSRSISTSDQMLARLTQL 260



 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S  I+ +GL  Q  +M +I+ N+AN  T G       ++R    FE++++ +
Sbjct: 1  MVRSLWISKTGLDAQQTKMDVIANNLANISTNG-------FKRMRPVFEDLLYQT 48


>gi|297570257|ref|YP_003691601.1| protein of unknown function DUF1078 domain protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296926172|gb|ADH86982.1| protein of unknown function DUF1078 domain protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 118

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 14/129 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSGGVR 62
           ++   H A SGL     +    + N AN  T G       Y++  ++  E V  G+   R
Sbjct: 1   MVTGIHSALSGLLALQQKTAATAHNTANVNTDG-------YKKVRVTLHEGVAPGTVEPR 53

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +KI       V+E     P      +V+  NV++  E  ++  + R Y ANL+ ++   
Sbjct: 54  AEKI-ETPGPVVQEQTAAGPE-----MVEKSNVDLAQEMPNLMLSRRYYQANLKVVQSED 107

Query: 123 DMMTTTLDL 131
           + + + L++
Sbjct: 108 ERLGSLLNI 116


>gi|218507129|ref|ZP_03505007.1| flagellar basal body rod protein FlgG [Rhizobium etli Brasil 5]
          Length = 217

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 5/52 (9%)

Query: 80  GHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G+P          G ++  NV+ + E  ++    R Y  N + I  + +M +
Sbjct: 159 GNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAYEMNSKVITTADEMAS 210


>gi|154174905|ref|YP_001408076.1| flagellar basal body rod protein FlgG [Campylobacter curvus 525.92]
 gi|112802860|gb|EAU00204.1| flagellar basal-body rod protein FlgG [Campylobacter curvus 525.92]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G V+  NV ++ E  D+    R Y AN + I  S  M+
Sbjct: 216 QGFVEMSNVQLVEEMTDLITGQRAYEANSKAITTSDSML 254



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ S + A +G+  Q  ++ + S NIAN  T G       Y++    F ++M+ 
Sbjct: 1  MMRSLYTAATGMIAQQTQIDVTSNNIANVNTYG-------YKKNRAEFADLMYQ 47


>gi|34497161|ref|NP_901376.1| flagellar basal body rod protein FlgG [Chromobacterium violaceum
           ATCC 12472]
 gi|34103018|gb|AAQ59381.1| flagellar basal-body rod protein flgG [Chromobacterium violaceum
           ATCC 12472]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             G ++  NV V+ E  DM    R Y  N + +  + +M+   
Sbjct: 215 KQGSLEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQQL 257



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 13/78 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
          M+    +  I+ +G+  Q AR+  I+ N+AN  TTG       ++R  + FE++ +    
Sbjct: 1  MNP---ALWISKTGIQAQDARLTAIANNLANVNTTG-------FKRDRMIFEDLFYQVEK 50

Query: 58 SGGVRVKKIGVDQSTFVE 75
            G +V    V  S    
Sbjct: 51 QPGSKVDDNNVSPSGVQM 68


>gi|330818583|ref|YP_004362288.1| flagellar basal-body rod protein FlgG [Burkholderia gladioli BSR3]
 gi|327370976|gb|AEA62332.1| flagellar basal-body rod protein FlgG [Burkholderia gladioli BSR3]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVESSNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQM 260



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|254698165|ref|ZP_05159993.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 246

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+ + E  D+    R Y  N + I+ + +M 
Sbjct: 199 KQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAADEMA 238


>gi|58039417|ref|YP_191381.1| flagellar basal body rod protein FlgG [Gluconobacter oxydans 621H]
 gi|58001831|gb|AAW60725.1| Flagellar basal-body rod protein FlgG [Gluconobacter oxydans 621H]
          Length = 263

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/46 (39%), Positives = 23/46 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G V+  NVNV+ E  D+    R Y  N + I  S DMM T  +L 
Sbjct: 216 QGYVENSNVNVVTEITDLITAQRAYEMNSKVITASDDMMKTVTNLG 261



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   ++ IS NIAN  TTG       Y+R    F+++++ +
Sbjct: 1  MRALDIAGTGMQAQQTNVETISNNIANMSTTG-------YKRSRAEFQDLIYQN 47


>gi|260886211|ref|ZP_05897474.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
 gi|330839793|ref|YP_004414373.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
 gi|260863930|gb|EEX78430.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
 gi|329747557|gb|AEC00914.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
          Length = 263

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+V+  N+ ++ E  +M    R Y +N + I  S  M+     L R
Sbjct: 217 QGVVEMSNIQIVEEMVNMIVAQRAYESNSKAITTSDSMLEIANSLKR 263



 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGD 37
          ++ +   A SG+  Q   M +++ NIAN  T G 
Sbjct: 1  MMRALWSAASGMKAQQDNMDVVAHNIANVNTFGS 34


>gi|254505064|ref|ZP_05117215.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11]
 gi|222441135|gb|EEE47814.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11]
          Length = 262

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 19/99 (19%)

Query: 29  IAN-ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           +AN A   G  P      R+T         + G  V  +  D    V             
Sbjct: 175 LANFANDVGLEPVGGNLFRETP--------ASGAPVAGVPGDPGFGVVR----------Q 216

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G ++  NV+ + E   +    R Y  N + +K + +M  
Sbjct: 217 GYLESSNVDPVKEITALISAQRGYEMNSKVMKAADEMAN 255



 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 11/71 (15%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
          + +  IA +G++ Q   +++++ NIAN  TT        ++R    F ++++ +    GV
Sbjct: 1  MKALAIAATGMSAQQLNVEVVANNIANMNTTS-------FKRAQAEFSDLLYQAERLQGV 53

Query: 62 RVKKIGVDQST 72
            +  G D   
Sbjct: 54 PNRG-GEDPVP 63


>gi|239907792|ref|YP_002954533.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus
           RS-1]
 gi|239797658|dbj|BAH76647.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus
           RS-1]
          Length = 260

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 79  PGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           PG+  A   A G ++  NV ++ E   +    R Y AN ++I  +  M+ T +++ R
Sbjct: 204 PGNQNAGTLAQGFLEMSNVELVDEMVGLIVGQRAYEANSKSITTADGMLQTAVNIKR 260



 Score = 37.2 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 7/58 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          ++ S   A++G+     ++  +S N+AN  T G       +++    FE++M+ +  V
Sbjct: 1  MMRSLWTASTGMVAMQMQIDTMSNNLANVNTVG-------FKKSRAEFEDLMYQTLQV 51


>gi|77918760|ref|YP_356575.1| flagellar basal body rod protein FlgG [Pelobacter carbinolicus DSM
           2380]
 gi|77544843|gb|ABA88405.1| flagellar biosynthesis protein [Pelobacter carbinolicus DSM 2380]
          Length = 261

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 81  HPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +P  +     + G ++  NV+++ E  +M    R Y  N + IK + +M+  T +L
Sbjct: 205 NPGEDGFGSLSQGFLEGSNVSIMEEMVNMIAGQRAYEINSKAIKTADEMLQMTNNL 260



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I +   + +G+  Q   M +I+ N+AN  + G       +++    F+++++ +  V+V
Sbjct: 1  MIRALWTSATGMEAQQVNMDVIAHNLANVNSAG-------FKKSRADFQDILYQT--VKV 51

Query: 64 KK 65
            
Sbjct: 52 AG 53


>gi|209521591|ref|ZP_03270289.1| flagellar basal-body rod protein FlgG [Burkholderia sp. H160]
 gi|209497974|gb|EDZ98131.1| flagellar basal-body rod protein FlgG [Burkholderia sp. H160]
          Length = 262

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTLSQM 260



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|306820920|ref|ZP_07454540.1| flagellar basal-body rod protein FlgG [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551034|gb|EFM39005.1| flagellar basal-body rod protein FlgG [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 270

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E   M    R Y  N +T++ + DM+ T   L R
Sbjct: 224 QGYLEMSNVQLVDEMVRMITAQRAYEINSKTVQTADDMLNTINQLKR 270



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 7/46 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A SG+  Q   + +IS NI+N  TTG       ++ +   F+++++
Sbjct: 7  AASGMKAQQLNVDVISNNISNVNTTG-------FKAQKTEFKDLLY 45


>gi|307718427|ref|YP_003873959.1| flagellar hook-basal body complex protein [Spirochaeta thermophila
           DSM 6192]
 gi|306532152|gb|ADN01686.1| flagellar hook-basal body complex protein [Spirochaeta thermophila
           DSM 6192]
          Length = 280

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E   M E NR Y AN +TI+    ++   ++
Sbjct: 232 QGFLEGSNVNPVTEMVQMIEVNRAYEANQKTIETQDTLLGRLIN 275



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 7/44 (15%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          I  SG+A Q  RM  I+ N+AN   TG       Y+R T  F+ 
Sbjct: 7  IGASGMASQLNRMDAIANNLANVDLTG-------YKRDTAIFKA 43


>gi|260762610|ref|ZP_05874944.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260673033|gb|EEX59854.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 243

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+ + E  D+    R Y  N + I+ + +M 
Sbjct: 196 KQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAADEMA 235


>gi|51246533|ref|YP_066417.1| flagellar hook basal body protein (FlgG) [Desulfotalea psychrophila
           LSv54]
 gi|50877570|emb|CAG37410.1| probable flagellar hook basal body protein (FlgG) [Desulfotalea
           psychrophila LSv54]
          Length = 261

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/43 (39%), Positives = 22/43 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN++ E A M  T R Y  N   +K S  MM T  DL
Sbjct: 218 YLEGSNVNLVAEMAAMISTQRAYEINSSMVKTSDQMMQTVNDL 260



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 32/70 (45%), Gaps = 7/70 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S     +G+  Q   + II+ N+AN  TTG       +++ +  F+++++ +  V  
Sbjct: 1  MFRSLWTGTTGMQAQQLNIDIIANNLANVNTTG-------FKKSSADFQDLLYQTMKVPG 53

Query: 64 KKIGVDQSTF 73
           +   D  + 
Sbjct: 54 SQTSPDTESP 63


>gi|295678056|ref|YP_003606580.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1002]
 gi|295437899|gb|ADG17069.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1002]
          Length = 262

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTLSQM 260



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|193222346|emb|CAL62046.2| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Herminiimonas arsenicoxydans]
          Length = 260

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 78  DPGHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +   P +N +G      V+  NVNV+ E   M +T R Y  N + I  S  M+     +
Sbjct: 202 NTNTPGSNGAGLLKQNYVETSNVNVVEELVSMIQTQRAYEINSKAITTSDQMLQRLTQI 260



 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +GL  Q  +M +IS N+AN  TTG       ++R    FE++++ +
Sbjct: 1  MIRSLWISKTGLDAQQTQMDVISNNLANVSTTG-------FKRSRAVFEDLLYQT 48


>gi|292487941|ref|YP_003530816.1| flagellar basal-body rod protein FlgG [Erwinia amylovora CFBP1430]
 gi|292899160|ref|YP_003538529.1| flagellar basal-body rod protein FlgG [Erwinia amylovora ATCC
           49946]
 gi|291199008|emb|CBJ46119.1| flagellar basal-body rod protein FlgG (distal rod protein) [Erwinia
           amylovora ATCC 49946]
 gi|291553363|emb|CBA20408.1| Flagellar basal-body rod protein flgG [Erwinia amylovora CFBP1430]
 gi|312172062|emb|CBX80319.1| Flagellar basal-body rod protein flgG [Erwinia amylovora ATCC
           BAA-2158]
          Length = 260

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E   M +T R Y  N + I  S  M+     +
Sbjct: 216 QGYVETSNVNVAEELVSMIQTQRAYEINSKAISTSDQMLAKLTQI 260



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++M+ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLMYQT 48


>gi|330721006|gb|EGG99167.1| Flagellar basal-body rod protein FlgG [gamma proteobacterium
           IMCC2047]
          Length = 261

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G+++  NVN++ E  DM  T R Y  N + I  S  M+ 
Sbjct: 215 EQGVLENSNVNIVEELVDMITTQRAYEMNTKVISTSDQMLQ 255



 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++AS  I+ +GL+ Q   +  IS N+AN  TTG       Y+R+   F+++++ 
Sbjct: 1  MLASLWISKTGLSAQDQALASISNNLANVSTTG-------YKRERAVFQDLLYP 47


>gi|33592481|ref|NP_880125.1| flagellar basal body rod protein FlgG [Bordetella pertussis Tohama
           I]
 gi|33572127|emb|CAE41669.1| flagellar basal-body rod protein FlgG [Bordetella pertussis Tohama
           I]
 gi|332381898|gb|AEE66745.1| flagellar basal body rod protein FlgG [Bordetella pertussis CS]
          Length = 261

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV  E  +M  T R Y  N + +K S +M+     L
Sbjct: 219 YVETSNVNVAEELVNMITTQRAYEMNSKAVKTSDEMLARLTQL 261



 Score = 41.1 bits (96), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S  +A +GL  Q   M +IS N+AN +T G   G          F+++M+ +    G
Sbjct: 1  MMRSLWVAKTGLEGQQTSMDVISNNLANVQTNGFKWG-------RAVFQDLMYQTLRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V       S    
Sbjct: 54 AQVGDANQLPSGLQL 68


>gi|167585196|ref|ZP_02377584.1| flagellar basal-body rod protein FlgG [Burkholderia ubonensis Bu]
          Length = 262

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+     +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQNVTQM 260



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       Y+     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------YKGSRAVFEDLLYQT 48


>gi|303326311|ref|ZP_07356754.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3]
 gi|302864227|gb|EFL87158.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3]
          Length = 503

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NV++  E  +M  T R + +N + +  +  M+   ++L R
Sbjct: 460 VENSNVDMATEMVNMIITQRGFQSNSKVVTTADQMLQKAMELKR 503


>gi|296157454|ref|ZP_06840289.1| flagellar basal-body rod protein FlgG [Burkholderia sp. Ch1-1]
 gi|295892226|gb|EFG72009.1| flagellar basal-body rod protein FlgG [Burkholderia sp. Ch1-1]
          Length = 262

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTLSQM 260



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|323527711|ref|YP_004229864.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1001]
 gi|323384713|gb|ADX56804.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1001]
          Length = 262

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTLSQM 260



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|224825779|ref|ZP_03698883.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
 gi|224602003|gb|EEG08182.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
          Length = 262

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 80  GHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G+P ++A      G ++  NV V+ E  DM    R Y  N + +  + +MM 
Sbjct: 204 GNPGSDALGKLKQGALEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAADNMMQ 255



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 13/78 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
          M+    +  I+ +G+  Q AR+  I+ N+AN  T G       ++R  + FE++ +    
Sbjct: 1  MNP---ALWISKTGIQAQDARLGAIANNLANVNTVG-------FKRDRMVFEDLFYQVER 50

Query: 58 SGGVRVKKIGVDQSTFVE 75
            G RV       S    
Sbjct: 51 QPGARVDANNASPSGVQL 68


>gi|170694394|ref|ZP_02885548.1| flagellar basal-body rod protein FlgG [Burkholderia graminis C4D1M]
 gi|170140817|gb|EDT08991.1| flagellar basal-body rod protein FlgG [Burkholderia graminis C4D1M]
          Length = 262

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTLSQM 260



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q ++M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQSQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|167626157|ref|YP_001676451.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis
           HAW-EB4]
 gi|167356179|gb|ABZ78792.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis
           HAW-EB4]
          Length = 261

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  V+ I  DQ+                G ++  NVNV+ E  +M  T R Y  N +
Sbjct: 196 GASGAAVEGIAGDQALGQIR----------QGALEGANVNVVEEMVEMISTQRAYEMNAK 245

Query: 117 TIKQSHDMM 125
            +  S DM+
Sbjct: 246 VVSASDDML 254



 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       ++R  ++F ++        G
Sbjct: 1  MQSALWVSKTGLTAQDTKMTTIANNLANVNTTG-------FKRDRVAFNDLFYQVQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V +     S    
Sbjct: 54 GQVDEQNELPSGLQL 68


>gi|33601543|ref|NP_889103.1| flagellar basal body rod protein FlgG [Bordetella bronchiseptica
           RB50]
 gi|33575979|emb|CAE33058.1| flagellar basal-body rod protein [Bordetella bronchiseptica RB50]
          Length = 261

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV  E  +M  T R Y  N + +K S +M+     L
Sbjct: 219 YVETSNVNVAEELVNMITTQRAYEMNSKAVKTSDEMLARLTQL 261



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S  +A +GL  Q   M +IS N+AN +T G       ++R    F+++M+ +    G
Sbjct: 1  MMRSLWVAKTGLEGQQTSMDVISNNLANVQTNG-------FKRGRAVFQDLMYQTLRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V       S    
Sbjct: 54 AQVGDANQLPSGLQL 68


>gi|239815249|ref|YP_002944159.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
 gi|239801826|gb|ACS18893.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
          Length = 262

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 23/40 (57%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           A G ++  NV +  E  ++    R+Y AN++ ++ S +M+
Sbjct: 215 AQGFLEGSNVKLTEEMVNLMVAQRVYEANVKVMQASDEML 254



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +  + +I+ +G+  Q   +  I+ N+AN  TTG       +++  + F ++M    G
Sbjct: 1  MFDALYISATGMQAQQLNVDTIANNLANVNTTG-------FKKSKVGFSDLMVREAG 50


>gi|148266116|ref|YP_001232822.1| flagellar basal body rod protein FlgG [Geobacter uraniireducens
           Rf4]
 gi|146399616|gb|ABQ28249.1| flagellar basal-body rod protein FlgG [Geobacter uraniireducens
           Rf4]
          Length = 262

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+V+ E  +M    R Y  N + ++ + +M+ T  +L R
Sbjct: 215 SQGFLEMSNVSVMEEMVNMIVGQRAYEINSKAVQAADEMLQTANNLRR 262



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I +   A SG+  Q   + +++ N+AN  TTG       +++    F+++M+ +
Sbjct: 1  MIRALWTAASGMQAQQLNIDVVANNLANVNTTG-------FKKSRADFQDLMYQN 48


>gi|149375032|ref|ZP_01892805.1| Flagellar basal body rod protein [Marinobacter algicola DG893]
 gi|149360921|gb|EDM49372.1| Flagellar basal body rod protein [Marinobacter algicola DG893]
          Length = 262

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G+V+  NV V+ E  +M  T R Y  N + +  +  M+ 
Sbjct: 215 EQGMVEASNVEVVEELVNMITTQRAYEMNSKVVSATDQMLQ 255



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +GL+ Q   M  IS N+AN  TTG       ++R    F+++++ 
Sbjct: 7  VSKTGLSAQDTNMSTISNNLANVNTTG-------FKRDRAVFQDLLYQ 47


>gi|188592119|ref|YP_001796717.1| flagellar basal body rod protein flgg [Cupriavidus taiwanensis LMG
           19424]
 gi|170938493|emb|CAP63480.1| FlgG: Flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
           19424]
          Length = 261

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            V+  NVNV+ E   M +T R Y  N + ++ S  M+     L 
Sbjct: 218 YVEASNVNVVEELVSMIQTQRAYEINSKAVQASDQMLQRLAQLG 261



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q  +M +IS N+AN  T G       ++R    FEE+M+ +
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNG-------FKRGRAVFEELMYQT 48


>gi|91785632|ref|YP_560838.1| flagellar basal body rod protein FlgG [Burkholderia xenovorans
           LB400]
 gi|91689586|gb|ABE32786.1| flgG; flagellar basal-body rod protein [Burkholderia xenovorans
           LB400]
          Length = 262

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTLSQM 260



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|307731361|ref|YP_003908585.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1003]
 gi|307585896|gb|ADN59294.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1003]
          Length = 262

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTLSQM 260



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|317047693|ref|YP_004115341.1| flagellar basal-body rod protein FlgG [Pantoea sp. At-9b]
 gi|316949310|gb|ADU68785.1| flagellar basal-body rod protein FlgG [Pantoea sp. At-9b]
          Length = 260

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E   M +T R Y  N + +  S  M+     L
Sbjct: 216 QGYVETSNVNVAEELVSMIQTQRAYEINSKAVSTSDQMLAKLTQL 260



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R    FE++M+ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRSRAVFEDLMYQT 48


>gi|241204820|ref|YP_002975916.1| hypothetical protein Rleg_2100 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858710|gb|ACS56377.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 101

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 48/131 (36%), Gaps = 32/131 (24%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L   A  A SG+  Q+ R+  I+ NIAN      TP    Y R   S   V+  SGGV+ 
Sbjct: 3   LSDIASTALSGMRAQATRVSAIANNIAN----TSTPD---YARLNTSLTSVV--SGGVQA 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
               V  +T                      V+   E  D+ E  + Y AN    +   D
Sbjct: 54  ---VVSPTT--------------------SEVDQATELTDLIEAEQSYKANAVVFETGAD 90

Query: 124 MMTTTLDLLRD 134
           M    + + RD
Sbjct: 91  MWEMLMSIKRD 101


>gi|307266107|ref|ZP_07547652.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918889|gb|EFN49118.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 266

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 220 QGFLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 16/99 (16%)

Query: 12  NSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSG--------- 59
            +G+  Q   + +I+ N+AN  TT        ++    +T+  E V  G G         
Sbjct: 9   ATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGKPVNMQVGV 68

Query: 60  GVRVKKIGVD--QSTFVEEFDPGHPVANASGI--VKYPN 94
           GVR   I  D  + +  +  +P     +  G   V  P+
Sbjct: 69  GVRPSAIVKDFTEGSLQQTENPLDLALDGEGFFAVLGPD 107


>gi|306846278|ref|ZP_07478839.1| flagellar basal-body rod protein FlgG [Brucella sp. BO1]
 gi|306273273|gb|EFM55142.1| flagellar basal-body rod protein FlgG [Brucella sp. BO1]
          Length = 262

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 4/76 (5%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV--ANASGIVKYPNVNVLVETADMRETNR 109
           E  +   GG   ++     S  V    PG P   +   G ++  NV+ + E  D+    R
Sbjct: 181 EAGLEPLGGNLYRETEASGSPLVGV--PGDPGYGSIKQGYLEASNVDPVKEITDLITAQR 238

Query: 110 LYMANLQTIKQSHDMM 125
            Y  N + I+ + +M 
Sbjct: 239 AYEMNSKVIQAADEMA 254



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ S
Sbjct: 1  MKALTIAATGMNAQQLNLEVIANNIANINTTG-------FKRARAEFTDLLYQS 47


>gi|317406199|gb|EFV86448.1| flagellar basal-body rod protein FlgG [Achromobacter xylosoxidans
           C54]
          Length = 261

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV  E  +M  T R Y  N + +K S +M+     L
Sbjct: 219 YVETSNVNVAEELVNMITTQRAYEMNSKAVKTSDEMLARLTQL 261



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S  IA +GL  Q   M +IS N+AN  T G       ++R    F+++M+ +    G
Sbjct: 1  MMRSLWIAKTGLEGQQTSMDVISNNLANVATNG-------FKRGRAVFQDLMYQTLRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V       S    
Sbjct: 54 AQVGDATQLPSGLQL 68


>gi|227112523|ref|ZP_03826179.1| flagellar basal body rod protein FlgG [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 260

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 80  GHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +P  N +G      V+  NVNV  E   M +T R Y  N + I  S  M+     L
Sbjct: 204 TNPGLNGAGLLYQKYVETSNVNVAEELVSMIQTQRAYEINSKAISSSDQMLQKLTQL 260



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+ +
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMYQT 48


>gi|221069320|ref|ZP_03545425.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni KF-1]
 gi|220714343|gb|EED69711.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni KF-1]
          Length = 260

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 215 QQGYLEASNVNVVQELVTMIQTQRAYEMNSKAIQTSDQMLAKLAQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +G+  Q  ++ +IS N+AN  TTG       Y+R    FE++++ +
Sbjct: 1  MINSLFIAKTGMEAQQTQLDVISHNLANVSTTG-------YKRANAVFEDLIYQN 48


>gi|261821155|ref|YP_003259261.1| flagellar basal body rod protein FlgG [Pectobacterium wasabiae
           WPP163]
 gi|261605168|gb|ACX87654.1| flagellar basal-body rod protein FlgG [Pectobacterium wasabiae
           WPP163]
          Length = 260

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 80  GHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +P  N +G      V+  NVNV  E   M +T R Y  N + I  S  M+     L
Sbjct: 204 SNPGLNGAGLLFQKYVETSNVNVAEELVSMIQTQRAYEINSKAISSSDQMLQKLTQL 260



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+ +
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMYQT 48


>gi|187925759|ref|YP_001897401.1| flagellar basal body rod protein FlgG [Burkholderia phytofirmans
           PsJN]
 gi|187716953|gb|ACD18177.1| flagellar basal-body rod protein FlgG [Burkholderia phytofirmans
           PsJN]
          Length = 262

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTLSQM 260



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|326389274|ref|ZP_08210842.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994637|gb|EGD53061.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 266

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 220 QGFLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 16/107 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSG- 59
           ++ +   A +G+  Q   + +I+ N+AN  TT        ++    +T+  E V  G G 
Sbjct: 1   MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60

Query: 60  --------GVRVKKIGVD--QSTFVEEFDPGHPVANASGI--VKYPN 94
                   GVR   I  D  + +  +  +P     +  G   V  P+
Sbjct: 61  PVNMQVGVGVRPSAIVKDFTEGSLQQTENPLDLALDGEGFFAVLGPD 107


>gi|90422610|ref|YP_530980.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisB18]
 gi|90104624|gb|ABD86661.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB18]
          Length = 262

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 10/69 (14%)

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           S GV V  +  D   F + +   H        ++  NV+ + E  ++    R Y  N + 
Sbjct: 197 SSGVPVVGVPGDPG-FGKIY--HH-------YLESSNVDPVKEITELISAQRSYEMNSKV 246

Query: 118 IKQSHDMMT 126
           I  + +M  
Sbjct: 247 ITAADEMAQ 255



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 7/53 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + +  IA +G++ Q   +++I+ NIAN  TT        Y+R    F ++ + 
Sbjct: 1  MRALAIAATGMSAQQLNVEVIANNIANINTTS-------YKRARAEFTDLFYQ 46


>gi|264676572|ref|YP_003276478.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni
           CNB-2]
 gi|299531284|ref|ZP_07044694.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni S44]
 gi|262207084|gb|ACY31182.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni
           CNB-2]
 gi|298720691|gb|EFI61638.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni S44]
          Length = 260

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 215 QQGYLEASNVNVVQELVTMIQTQRAYEMNSKAIQTSDQMLAKLAQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +G+  Q  ++ +IS N+AN  TTG       Y+R    FE++++ +
Sbjct: 1  MINSLFIAKTGMEAQQTQLDVISHNLANVSTTG-------YKRANAVFEDLIYQN 48


>gi|134095095|ref|YP_001100170.1| basal-body rod protein [Herminiimonas arsenicoxydans]
          Length = 242

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 78  DPGHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +   P +N +G      V+  NVNV+ E   M +T R Y  N + I  S  M+     +
Sbjct: 184 NTNTPGSNGAGLLKQNYVETSNVNVVEELVSMIQTQRAYEINSKAITTSDQMLQRLTQI 242



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 7/37 (18%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M +IS N+AN  TTG       ++R    FE++++ +
Sbjct: 1  MDVISNNLANVSTTG-------FKRSRAVFEDLLYQT 30


>gi|17989431|ref|NP_542064.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 1
           str. 16M]
 gi|23499916|ref|NP_699356.1| flagellar basal body rod protein FlgG [Brucella suis 1330]
 gi|62317103|ref|YP_222956.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 1 str.
           9-941]
 gi|83269095|ref|YP_418386.1| flagellar basal body rod protein FlgG [Brucella melitensis biovar
           Abortus 2308]
 gi|148557926|ref|YP_001257213.1| flagellar basal body rod protein FlgG [Brucella ovis ATCC 25840]
 gi|161620236|ref|YP_001594122.1| flagellar basal body rod protein FlgG [Brucella canis ATCC 23365]
 gi|163844346|ref|YP_001622001.1| flagellar basal body rod protein FlgG [Brucella suis ATCC 23445]
 gi|189022368|ref|YP_001932109.1| flagellar basal body rod protein FlgG [Brucella abortus S19]
 gi|225628625|ref|ZP_03786659.1| flagellar basal-body rod protein FlgG [Brucella ceti str. Cudo]
 gi|237816665|ref|ZP_04595657.1| flagellar basal-body rod protein FlgG [Brucella abortus str. 2308
           A]
 gi|254691412|ref|ZP_05154666.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 6 str.
           870]
 gi|254695290|ref|ZP_05157118.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 3 str.
           Tulya]
 gi|254702576|ref|ZP_05164404.1| flagellar basal body rod protein FlgG [Brucella suis bv. 3 str.
           686]
 gi|254706292|ref|ZP_05168120.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis
           M163/99/10]
 gi|254711414|ref|ZP_05173225.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis
           B2/94]
 gi|254720610|ref|ZP_05182421.1| flagellar basal body rod protein FlgG [Brucella sp. 83/13]
 gi|254731833|ref|ZP_05190411.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 4 str.
           292]
 gi|256029956|ref|ZP_05443570.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis
           M292/94/1]
 gi|256043073|ref|ZP_05446017.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256059608|ref|ZP_05449806.1| flagellar basal body rod protein FlgG [Brucella neotomae 5K33]
 gi|256111943|ref|ZP_05452894.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 3
           str. Ether]
 gi|256158118|ref|ZP_05456036.1| flagellar basal body rod protein FlgG [Brucella ceti M490/95/1]
 gi|256252928|ref|ZP_05458464.1| flagellar basal body rod protein FlgG [Brucella ceti B1/94]
 gi|256256598|ref|ZP_05462134.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 9 str.
           C68]
 gi|260544341|ref|ZP_05820162.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260564303|ref|ZP_05834788.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260568516|ref|ZP_05838985.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|260757026|ref|ZP_05869374.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 6 str.
           870]
 gi|260759602|ref|ZP_05871950.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 4 str.
           292]
 gi|260882836|ref|ZP_05894450.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 9 str.
           C68]
 gi|261215659|ref|ZP_05929940.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 3 str.
           Tulya]
 gi|261220019|ref|ZP_05934300.1| flagellar basal-body rod protein FlgG [Brucella ceti B1/94]
 gi|261313736|ref|ZP_05952933.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           M163/99/10]
 gi|261319022|ref|ZP_05958219.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           B2/94]
 gi|261323577|ref|ZP_05962774.1| flagellar basal-body rod protein FlgG [Brucella neotomae 5K33]
 gi|261753156|ref|ZP_05996865.1| flagellar basal-body rod protein FlgG [Brucella suis bv. 3 str.
           686]
 gi|265985650|ref|ZP_06098385.1| flagellar basal-body rod protein FlgG [Brucella sp. 83/13]
 gi|265986975|ref|ZP_06099532.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           M292/94/1]
 gi|265989511|ref|ZP_06102068.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265993390|ref|ZP_06105947.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 3
           str. Ether]
 gi|265996635|ref|ZP_06109192.1| flagellar basal-body rod protein FlgG [Brucella ceti M490/95/1]
 gi|297249954|ref|ZP_06933655.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 5 str.
           B3196]
 gi|306838572|ref|ZP_07471409.1| flagellar basal-body rod protein FlgG [Brucella sp. NF 2653]
 gi|306841049|ref|ZP_07473773.1| flagellar basal-body rod protein FlgG [Brucella sp. BO2]
 gi|17985308|gb|AAL54328.1| flagellar basal-body rod protein flgg [Brucella melitensis bv. 1
           str. 16M]
 gi|23463493|gb|AAN33361.1| flagellar basal-body rod protein FlgG [Brucella suis 1330]
 gi|62197296|gb|AAX75595.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 1 str.
           9-941]
 gi|82939369|emb|CAJ12317.1| Flagellar basal body rod protein [Brucella melitensis biovar
           Abortus 2308]
 gi|148369211|gb|ABQ62083.1| flagellar basal-body rod protein FlgG [Brucella ovis ATCC 25840]
 gi|161337047|gb|ABX63351.1| flagellar basal-body rod protein FlgG [Brucella canis ATCC 23365]
 gi|163675069|gb|ABY39179.1| flagellar basal-body rod protein FlgG [Brucella suis ATCC 23445]
 gi|189020942|gb|ACD73663.1| Flagellar basal body rod protein [Brucella abortus S19]
 gi|225616471|gb|EEH13519.1| flagellar basal-body rod protein FlgG [Brucella ceti str. Cudo]
 gi|237787478|gb|EEP61694.1| flagellar basal-body rod protein FlgG [Brucella abortus str. 2308
           A]
 gi|260097612|gb|EEW81486.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260151946|gb|EEW87039.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260155181|gb|EEW90262.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|260669920|gb|EEX56860.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 4 str.
           292]
 gi|260677134|gb|EEX63955.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 6 str.
           870]
 gi|260872364|gb|EEX79433.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 9 str.
           C68]
 gi|260917266|gb|EEX84127.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 3 str.
           Tulya]
 gi|260918603|gb|EEX85256.1| flagellar basal-body rod protein FlgG [Brucella ceti B1/94]
 gi|261298245|gb|EEY01742.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           B2/94]
 gi|261299557|gb|EEY03054.1| flagellar basal-body rod protein FlgG [Brucella neotomae 5K33]
 gi|261302762|gb|EEY06259.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           M163/99/10]
 gi|261742909|gb|EEY30835.1| flagellar basal-body rod protein FlgG [Brucella suis bv. 3 str.
           686]
 gi|262550932|gb|EEZ07093.1| flagellar basal-body rod protein FlgG [Brucella ceti M490/95/1]
 gi|262764260|gb|EEZ10292.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 3
           str. Ether]
 gi|263000180|gb|EEZ12870.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 1
           str. Rev.1]
 gi|264659172|gb|EEZ29433.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           M292/94/1]
 gi|264664242|gb|EEZ34503.1| flagellar basal-body rod protein FlgG [Brucella sp. 83/13]
 gi|297173823|gb|EFH33187.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 5 str.
           B3196]
 gi|306288938|gb|EFM60238.1| flagellar basal-body rod protein FlgG [Brucella sp. BO2]
 gi|306406358|gb|EFM62600.1| flagellar basal-body rod protein FlgG [Brucella sp. NF 2653]
          Length = 262

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+ + E  D+    R Y  N + I+ + +M 
Sbjct: 215 KQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAADEMA 254



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ S
Sbjct: 1  MKALTIAATGMNAQQLNLEVIANNIANINTTG-------FKRARAEFTDLLYQS 47


>gi|325295399|ref|YP_004281913.1| flagellar basal-body rod protein FlgG [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065847|gb|ADY73854.1| flagellar basal-body rod protein FlgG [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 266

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A G ++  NVN++ E  ++    R Y  N + I  + +M+ 
Sbjct: 219 AQGFLEASNVNIVEEMVNLIVAQRAYEVNSKGITTADEMLR 259



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   + +G+  Q   + +IS NIAN  T G
Sbjct: 1  MLRALWTSATGMEAQQTNLDVISHNIANVNTVG 33


>gi|237653581|ref|YP_002889895.1| flagellar basal body rod protein FlgG [Thauera sp. MZ1T]
 gi|237624828|gb|ACR01518.1| flagellar basal-body rod protein FlgG [Thauera sp. MZ1T]
          Length = 260

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 19/45 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E   M  T R Y  N + I  S  M+     L
Sbjct: 216 QGYVEVSNVNVAEELVSMIVTQRAYELNSRAISTSDQMLGRLTQL 260



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S   A +GL  Q   + +IS N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWTARTGLDAQQTSLDVISNNLANVSTNG-------FKRQRAIFEDLLYQT 48


>gi|73539452|ref|YP_299819.1| flagellar basal body rod protein FlgG [Ralstonia eutropha JMP134]
 gi|72122789|gb|AAZ64975.1| Protein of unknown function DUF1078 [Ralstonia eutropha JMP134]
          Length = 261

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            V+  NVNV+ E   M +T R Y  N + ++ S  M+     + 
Sbjct: 218 YVEASNVNVVEELVSMIQTQRAYEINSKAVQTSDQMLQRLTQMG 261



 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q  +M +IS N+AN  T G       ++R    FE++M+ +
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNG-------FKRGRAVFEDLMYQN 48


>gi|303249022|ref|ZP_07335267.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ]
 gi|302489608|gb|EFL49548.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ]
          Length = 519

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 87  SGI-VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG  ++  NV++  E  ++    R + +N + +  + +MM   L++ R
Sbjct: 472 SGYTLESSNVDMATEMVNLITLQRAFQSNSKVVTTADEMMQKALEIKR 519


>gi|50120641|ref|YP_049808.1| flagellar basal body rod protein FlgG [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611167|emb|CAG74613.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 260

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 80  GHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +P  N +G      V+  NVNV  E   M +T R Y  N + I  S  M+     L
Sbjct: 204 TNPGLNGAGLLYQKYVETSNVNVAEELVSMIQTQRAYEINSKAISSSDQMLQKLTQL 260



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+ +
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMYQT 48


>gi|297616912|ref|YP_003702071.1| flagellar basal-body rod protein FlgG [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144749|gb|ADI01506.1| flagellar basal-body rod protein FlgG [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 261

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 82  PVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P A+      +G ++  N+ ++ E  ++    R Y  N + I+ + +M+    +L R
Sbjct: 205 PEADTTVSLHAGYLEAANIQIVEEMVNLITAQRAYEINSKVIQSADEMLGMAANLRR 261



 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ + + +++G+  Q   +  I+ NIAN  TTG       Y++  + F+++++ 
Sbjct: 1  MLRALYTSSTGMFAQQLNIDNIAHNIANVNTTG-------YKKSRVEFQDLIYQ 47


>gi|283850807|ref|ZP_06368093.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. FW1012B]
 gi|283573730|gb|EFC21704.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. FW1012B]
          Length = 260

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV ++ E   +    R Y AN + I  +  M+ T +++ R
Sbjct: 213 AQGFLEMSNVELVDEMVGLIVGQRAYEANSKAITTADGMLQTAVNVKR 260



 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          ++ S   A +G+     ++  +S N+AN  T G       +++    FE++M+ +  V
Sbjct: 1  MMRSLWTATTGMVAMQMQIDTMSNNLANVNTVG-------FKKSRAEFEDLMYQTQQV 51


>gi|293605005|ref|ZP_06687401.1| flagellar basal-body rod protein FlgG [Achromobacter piechaudii
           ATCC 43553]
 gi|292816610|gb|EFF75695.1| flagellar basal-body rod protein FlgG [Achromobacter piechaudii
           ATCC 43553]
          Length = 261

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV  E  +M  T R Y  N + +K S +M+     L
Sbjct: 219 YVETSNVNVAEELVNMITTQRAYEMNSKAVKTSDEMLARLTQL 261



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S  IA +GL  Q   M +IS N+AN  T G       ++R    F+++M+ +    G
Sbjct: 1  MMRSLWIAKTGLEGQQTSMDVISNNLANVSTNG-------FKRGRAVFQDLMYQTLRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V       S    
Sbjct: 54 AQVGDATQLPSGLQL 68


>gi|167038473|ref|YP_001666051.1| hypothetical protein Teth39_2092 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116868|ref|YP_004187027.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166857307|gb|ABY95715.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319929959|gb|ADV80644.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 266

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 220 QGFLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 16/107 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSG- 59
           ++ +   A +G+  Q   + +I+ N+AN  TT        ++    +T+  E V  G G 
Sbjct: 1   MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60

Query: 60  --------GVRVKKIGVD--QSTFVEEFDPGHPVANASGI--VKYPN 94
                   GVR   I  D  + +  +  +P     +  G   V  P+
Sbjct: 61  PVNMQVGVGVRPSAIVKDFTEGSLQQTENPLDLALDGEGFFAVLGPD 107


>gi|297543694|ref|YP_003675996.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841469|gb|ADH59985.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 266

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 220 QGFLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 16/107 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSG- 59
           ++ +   A SG+  Q   + +I+ N+AN  TT        ++    +T+  E +  G G 
Sbjct: 1   MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENIYGGQGR 60

Query: 60  --------GVRVKKIGVD--QSTFVEEFDPGHPVANASGI--VKYPN 94
                   GVR   I  D  + +  +  +P     +  G   V  P+
Sbjct: 61  PVNMQVGVGVRPSAIVKDFTEGSLQQTDNPLDLALDGEGFFAVLGPD 107


>gi|289548122|ref|YP_003473110.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484]
 gi|289181739|gb|ADC88983.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484]
          Length = 454

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 29/47 (61%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV++  E  ++    R Y AN +TI  ++ ++  T++L+R
Sbjct: 408 SGMLEMSNVDIATEFVNLISAQRAYQANAKTITATNAVLDETVNLVR 454



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ S   A +GL      M I S+N+AN  T G       ++     F++V+  
Sbjct: 1  MLRSFFNAVTGLNAYRTWMDITSDNLANVNTIG-------FKASRPIFQDVISS 47


>gi|289577407|ref|YP_003476034.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter italicus
           Ab9]
 gi|289527120|gb|ADD01472.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter italicus
           Ab9]
          Length = 266

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 220 QGFLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 16/107 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSG- 59
           ++ +   A SG+  Q   + +I+ N+AN  TT        ++    +T+  E +  G G 
Sbjct: 1   MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENIYGGQGR 60

Query: 60  --------GVRVKKIGVD--QSTFVEEFDPGHPVANASGI--VKYPN 94
                   GVR   I  D  + +  +  +P     +  G   V  P+
Sbjct: 61  PVNMQVGVGVRPSAIVKDFTEGSLQQTDNPLDLALDGEGFFAVLGPD 107


>gi|268680164|ref|YP_003304595.1| flagellar basal-body rod protein FlgG [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618195|gb|ACZ12560.1| flagellar basal-body rod protein FlgG [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 262

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            V+  NV ++ E  D+    R Y AN + I  S +M+ 
Sbjct: 218 FVEMSNVQLVEEMTDLITGQRAYEANSKAITTSDEMLQ 255



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S + A +G+  Q  ++   S NI+N  T G       Y+++   F ++M+ +
Sbjct: 1  MIRSLYTAATGMIAQQTQIDTTSNNISNVNTIG-------YKKQRAEFADLMYQT 48


>gi|303248240|ref|ZP_07334503.1| flagellar basal-body rod protein FlgF [Desulfovibrio fructosovorans
           JJ]
 gi|302490378|gb|EFL50289.1| flagellar basal-body rod protein FlgF [Desulfovibrio fructosovorans
           JJ]
          Length = 261

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 27/47 (57%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A G ++ PNV V+ E  +M ET R Y A  + +  ++D+ T ++ + 
Sbjct: 211 AQGYLEKPNVQVVEEMVNMIETQRTYEAYQKVMTNTNDLDTKSIRMG 257



 Score = 41.5 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 12/55 (21%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M  L A        L+ +  R+ + + N+AN  TTG       Y+R  +SFE+  
Sbjct: 3  MSMLSAVFG----ALSTE-LRLNLSANNLANVNTTG-------YKRDRVSFEDTF 45


>gi|241766922|ref|ZP_04764728.1| flagellar basal-body rod protein FlgG [Acidovorax delafieldii 2AN]
 gi|241362626|gb|EER58474.1| flagellar basal-body rod protein FlgG [Acidovorax delafieldii 2AN]
          Length = 259

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 214 KQGFLETSNVNVVEELVTMIQTQRAYEMNSKAIQTSDQMLAKLAQL 259



 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +G++ Q  ++ +IS N+AN  TTG       Y+R    FE++++ +
Sbjct: 1  MINSLWIAKTGMSAQQTQLDVISHNLANVSTTG-------YKRNNAVFEDLIYQN 48


>gi|227328340|ref|ZP_03832364.1| flagellar basal body rod protein FlgG [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
 gi|253688970|ref|YP_003018160.1| flagellar basal-body rod protein FlgG [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755548|gb|ACT13624.1| flagellar basal-body rod protein FlgG [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 260

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 80  GHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +P  N +G      V+  NVNV  E   M +T R Y  N + I  S  M+     L
Sbjct: 204 TNPGLNGAGLLYQKYVETSNVNVAEELVSMIQTQRAYEINSKAISSSDQMLQKLTQL 260



 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+ +
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMYQT 48


>gi|225686012|ref|YP_002733984.1| flagellar basal body rod protein FlgG [Brucella melitensis ATCC
           23457]
 gi|256262865|ref|ZP_05465397.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|225642117|gb|ACO02030.1| flagellar basal-body rod protein FlgG [Brucella melitensis ATCC
           23457]
 gi|263092700|gb|EEZ16909.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|326410335|gb|ADZ67399.1| flagellar basal body rod protein FlgG [Brucella melitensis M28]
 gi|326553627|gb|ADZ88266.1| flagellar basal body rod protein FlgG [Brucella melitensis M5-90]
          Length = 262

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+ + E  D+    R Y  N + I+ + +M 
Sbjct: 215 KQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAADEMA 254



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ S
Sbjct: 1  MKALTIAATGMNAQQLNLEVIANNIANINTTG-------FKRARAEFTDLLYQS 47


>gi|20806699|ref|NP_621870.1| flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|20515153|gb|AAM23474.1| Flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
          Length = 266

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 220 QGFLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 13/92 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSG- 59
          ++ +   A +G+  Q   + +I+ N+AN  TT        ++    +T+  E V  G G 
Sbjct: 1  MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGR 60

Query: 60 --------GVRVKKIGVDQSTFVEEFDPGHPV 83
                  GVR   I  D S     +  G+P+
Sbjct: 61 PVNMQVGVGVRPSAIVKDFSEGNL-YQTGNPL 91


>gi|311105937|ref|YP_003978790.1| flagellar basal-body rod protein FlgG [Achromobacter xylosoxidans
           A8]
 gi|310760626|gb|ADP16075.1| flagellar basal-body rod protein FlgG [Achromobacter xylosoxidans
           A8]
          Length = 261

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV  E  +M  T R Y  N + +K S +M+     L
Sbjct: 219 YVETSNVNVAEELVNMITTQRAYEMNSKAVKTSDEMLARLTQL 261



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S  IA +GL  Q   M +IS N+AN  T G       ++R    F+++M+ +    G
Sbjct: 1  MMRSLWIAKTGLEGQQTSMDVISNNLANVSTNG-------FKRGRAVFQDLMYQTLRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V       S    
Sbjct: 54 AQVGDATQLPSGLQL 68


>gi|256014942|ref|YP_003104951.1| flagellar basal-body rod protein FlgG [Brucella microti CCM 4915]
 gi|255997602|gb|ACU49289.1| flagellar basal-body rod protein FlgG [Brucella microti CCM 4915]
          Length = 262

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+ + E  D+    R Y  N + I+ + +M 
Sbjct: 215 KQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAADEMA 254



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ S
Sbjct: 1  MKALMIAATGMNAQQLNLEVIANNIANINTTG-------FKRARAEFTDLLYQS 47


>gi|34498338|ref|NP_902553.1| flagellar basal-body rod protein FlgG [Chromobacterium violaceum
           ATCC 12472]
 gi|34104192|gb|AAQ60551.1| flagellar basal-body rod protein FlgG [Chromobacterium violaceum
           ATCC 12472]
          Length = 260

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           A  SG ++  NVNV  E  +M    R +  N + +  +  M+   
Sbjct: 213 AIKSGFLESSNVNVTEELVNMITAQRSFEMNSRAVTTADQMLQKL 257



 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + +IA +G+     ++ ++S N+AN  T G
Sbjct: 1  MMRALYIAKTGMDTSQFQLDVVSNNLANVNTVG 33


>gi|254478074|ref|ZP_05091457.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653]
 gi|214035936|gb|EEB76627.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653]
          Length = 266

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 220 QGFLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 13/92 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSG- 59
          ++ +   A +G+  Q   + +I+ N+AN  TT        ++    +T+  E V  G G 
Sbjct: 1  MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGR 60

Query: 60 --------GVRVKKIGVDQSTFVEEFDPGHPV 83
                  GVR   I  D S     +  G+P+
Sbjct: 61 PVNMQVGVGVRPSAIVKDFSEGNL-YQTGNPL 91


>gi|238028847|ref|YP_002913078.1| flagellar basal body rod protein FlgG [Burkholderia glumae BGR1]
 gi|237878041|gb|ACR30374.1| Flagellar basal-body rod protein [Burkholderia glumae BGR1]
          Length = 262

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 216 QGYVESSNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQM 260



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 48


>gi|242278484|ref|YP_002990613.1| flagellar basal body rod protein FlgG [Desulfovibrio salexigens DSM
           2638]
 gi|242121378|gb|ACS79074.1| flagellar basal-body rod protein FlgG [Desulfovibrio salexigens DSM
           2638]
          Length = 260

 Score = 58.4 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV ++ E   +    R Y  N + I  S  M+ T +++ R
Sbjct: 213 AQGYLEGSNVELVDEMVGLIVGQRAYETNSKAITTSDSMLQTAINVKR 260



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A +G+  Q   + ++S N+AN  T         +++  + FE++M+ +
Sbjct: 1  MMRSLWTAATGMVAQQTHIDVLSNNLANVNT-------QGFKKSRVEFEDLMYQT 48


>gi|227820858|ref|YP_002824828.1| flagellar basal body rod protein FlgG [Sinorhizobium fredii NGR234]
 gi|227339857|gb|ACP24075.1| flagellar basal-body rod protein FlgG [Sinorhizobium fredii NGR234]
          Length = 262

 Score = 58.4 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 79  PGHP--VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           P  P       G ++  NV+ + E  D+    R Y  N + I+ + +M 
Sbjct: 206 PADPGFAQIKQGYLESSNVDPVKEITDLISAQRAYEMNSKVIQAADEMA 254



 Score = 54.2 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       Y+R    F ++++ +
Sbjct: 1  MKALSIAATGMNAQQLNLEVIANNIANINTTG-------YKRARAEFSDLLYQT 47


>gi|163781856|ref|ZP_02176856.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883076|gb|EDP76580.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1]
          Length = 494

 Score = 58.4 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 28/47 (59%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV++  E  ++    R Y AN + I  S+ ++  T++L+R
Sbjct: 448 SGMLEMSNVDIAKEFINLITAQRAYQANARVITTSNTILDETVNLVR 494



 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ S   A +G+      + + S+N++N  T         ++     F++V+  
Sbjct: 1  MLRSFFNAVTGMDASRFWIDVTSDNLSNVNTVA-------FKAHRPLFQDVISS 47


>gi|153011524|ref|YP_001372738.1| flagellar basal body rod protein FlgG [Ochrobactrum anthropi ATCC
           49188]
 gi|151563412|gb|ABS16909.1| flagellar basal-body rod protein FlgG [Ochrobactrum anthropi ATCC
           49188]
          Length = 262

 Score = 58.4 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+ + E  D+    R Y  N + I+ + +M 
Sbjct: 215 KQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAADEMA 254



 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ S
Sbjct: 1  MKALTIAATGMNAQQLNLEVIANNIANINTTG-------FKRARAEFSDLLYQS 47


>gi|86356330|ref|YP_468222.1| flagellar hook protein FlgE [Rhizobium etli CFN 42]
 gi|86280432|gb|ABC89495.1| flagellar hook protein [Rhizobium etli CFN 42]
          Length = 434

 Score = 58.4 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 16/78 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG+  Q+ R+  +S+NIAN  TTG       Y+  + SF  ++       +
Sbjct: 3  IFGSMKTAVSGMNAQANRLSTVSDNIANVNTTG-------YKAVSTSFSSLVLPSSGGNY 55

Query: 57 GSGGVR--VKKIGVDQST 72
           SGGV+  V++   DQ  
Sbjct: 56 NSGGVQTSVRQAVSDQGD 73



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 387 KSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 434


>gi|116694221|ref|YP_728432.1| flagellar basal body rod protein FlgG [Ralstonia eutropha H16]
 gi|113528720|emb|CAJ95067.1| flagellar basal body rod protein [Ralstonia eutropha H16]
          Length = 261

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            V+  NVNV+ E   M +T R Y  N + ++ S  M+     L 
Sbjct: 218 YVEASNVNVVEELVSMIQTQRAYEINSKAVQASDQMLQRLSQLG 261



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q  +M +IS N+AN  T G       ++R    FEE+M+ +
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNG-------FKRGRAVFEELMYQT 48


>gi|146294548|ref|YP_001184972.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens
           CN-32]
 gi|145566238|gb|ABP77173.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens
           CN-32]
          Length = 261

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV V+ +  DQ+                G ++  NVNV+ E  +M  T R Y  N +
Sbjct: 196 AASGVAVEGVAGDQALGALR----------QGALEGANVNVVEEMVEMISTQRAYEMNAK 245

Query: 117 TIKQSHDMM 125
            +  S DM+
Sbjct: 246 VVSASDDML 254



 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       ++R  ++F ++        G
Sbjct: 1  MQSALWVSKTGLTAQDTKMTAIANNLANVNTTG-------FKRDRVAFNDLFYQVQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V  +    S    
Sbjct: 54 GQVDALNNLPSGLQL 68


>gi|126176154|ref|YP_001052303.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155]
 gi|304412506|ref|ZP_07394112.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
 gi|307307165|ref|ZP_07586903.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
 gi|125999359|gb|ABN63434.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155]
 gi|304349148|gb|EFM13560.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
 gi|306910404|gb|EFN40835.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
          Length = 261

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV V+ +  DQ+                G ++  NVNV+ E  +M  T R Y  N +
Sbjct: 196 AASGVAVEGVAGDQALGALR----------QGALEGANVNVVEEMVEMISTQRAYEMNAK 245

Query: 117 TIKQSHDMM 125
            +  S DM+
Sbjct: 246 VVSASDDML 254



 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       ++R  ++F ++        G
Sbjct: 1  MQSALWVSKTGLTAQDTKMTAIANNLANVNTTG-------FKRDRVAFNDLFYQVQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V  +    S    
Sbjct: 54 GQVDALNNLPSGLQL 68


>gi|320536024|ref|ZP_08036083.1| putative flagellar basal-body rod protein FlgF [Treponema
           phagedenis F0421]
 gi|320147123|gb|EFW38680.1| putative flagellar basal-body rod protein FlgF [Treponema
           phagedenis F0421]
          Length = 271

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NVNV+ E   M E NR Y AN +TI+    MM   
Sbjct: 222 QGFIEASNVNVVNEMVRMIEVNRAYEANQKTIQSEDTMMAKL 263



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 7/36 (19%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          A SG+  Q  ++ +IS N+AN  TT        Y+R
Sbjct: 8  AASGMNAQQQQLDVISNNLANVDTTS-------YKR 36


>gi|162147478|ref|YP_001601939.1| flagellar basal body rod protein FlgG [Gluconacetobacter
          diazotrophicus PAl 5]
 gi|209545587|ref|YP_002277816.1| flagellar basal body rod protein FlgG [Gluconacetobacter
          diazotrophicus PAl 5]
 gi|161786055|emb|CAP55637.1| putative flagellar basal-body rod protein flgG [Gluconacetobacter
          diazotrophicus PAl 5]
 gi|209533264|gb|ACI53201.1| flagellar basal-body rod protein FlgG [Gluconacetobacter
          diazotrophicus PAl 5]
          Length = 262

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 8/73 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S  IA +G+  Q+  +  IS NIAN  TTG       Y+R+   F+++++     RV
Sbjct: 1  MMPSLDIAATGMQAQTTNVDTISNNIANMTTTG-------YKRRRAEFQDLIYQDVR-RV 52

Query: 64 KKIGVDQSTFVEE 76
            +  D    V  
Sbjct: 53 GTMSSDTGDLVPA 65



 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  +VNV+ E  D+    R Y  N + I  S +M+ T  +L
Sbjct: 216 QQGFIEESSVNVVTEITDLITAQRAYEMNSKVITASDEMLQTLTNL 261


>gi|120597307|ref|YP_961881.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1]
 gi|120557400|gb|ABM23327.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1]
          Length = 261

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV V+ +  DQ+                G ++  NVNV+ E  +M  T R Y  N +
Sbjct: 196 AASGVAVEGVAGDQALGALR----------QGALEGANVNVVEEMVEMISTQRAYEMNAK 245

Query: 117 TIKQSHDMM 125
            +  S DM+
Sbjct: 246 VVSASDDML 254



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       ++R  ++F ++        G
Sbjct: 1  MQSALWVSKTGLTAQDTKMTAIANNLANVNTTG-------FKRDRVAFNDLFYQVQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V  +    S    
Sbjct: 54 GQVDALNNLPSGLQL 68


>gi|160896077|ref|YP_001561659.1| flagellar basal-body rod protein FlgG [Delftia acidovorans SPH-1]
 gi|160361661|gb|ABX33274.1| flagellar basal-body rod protein FlgG [Delftia acidovorans SPH-1]
          Length = 260

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 215 KQGYLEGSNVNVVQELVTMIQTQRAYEMNSKAIQTSDQMLAKLAQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  I+ +G+  Q  ++ +IS N+AN  TTG       Y+R +  FE++++ +
Sbjct: 1  MINSLFISKTGMEAQQTQLDVISHNLANVSTTG-------YKRASAVFEDLIYQN 48


>gi|323704841|ref|ZP_08116418.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535767|gb|EGB25541.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 266

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E  +M    R Y  N + I+ + DM++   +L R
Sbjct: 220 QGFLETSNVQVVNEMVNMIAAQRAYELNSKAIQAADDMLSIANNLRR 266



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 30/110 (27%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV---------------- 54
           A SG+  Q   + +IS N+AN  TT        ++R    F+++                
Sbjct: 8   AASGMNAQQLNVDVISNNLANVNTTA-------FKRDRAEFQDLIYQTLQTEDVNGGQGK 60

Query: 55  ---MHGSGGVRVKKIGVD--QSTFVEEFDPGHPVANASGI--VKYPNVNV 97
              M    GVR   I  D  + +  E  +P     +  G   V  P+ N 
Sbjct: 61  PVNMQVGVGVRPSAIVKDFSEGSLQETDNPLDVALDGEGFFAVLGPDGNT 110


>gi|319944133|ref|ZP_08018411.1| flagellar basal-body rod protein FlgG [Lautropia mirabilis ATCC
           51599]
 gi|319742627|gb|EFV95036.1| flagellar basal-body rod protein FlgG [Lautropia mirabilis ATCC
           51599]
          Length = 260

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 215 QQGYLETSNVNVVEELVSMIQTQRAYEINSKAIQTSDQMLARISQL 260



 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q  +M +IS N+AN  T G       Y+R    FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISHNLANVSTNG-------YKRSQAVFEDLIYQN 48


>gi|218677554|ref|ZP_03525451.1| flagellar basal body rod protein FlgG [Rhizobium etli CIAT 894]
          Length = 205

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 5/52 (9%)

Query: 80  GHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G+P          G ++  NV+ + E  ++    R Y  N + I  + +M +
Sbjct: 147 GNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAYEMNSKVITTADEMAS 198


>gi|114765244|ref|ZP_01444376.1| Flagellar basal body rod protein [Pelagibaca bermudensis HTCC2601]
 gi|114542379|gb|EAU45407.1| Flagellar basal body rod protein [Roseovarius sp. HTCC2601]
          Length = 261

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  NV+++ +  D+ +  R Y  N + I+ +  MM+    +
Sbjct: 216 QGYLEASNVDIIRQITDLIQAQRAYEMNSKAIETADQMMSAANQI 260



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 20/32 (62%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
          + +  IA +G+  Q   + +IS NIANA TTG
Sbjct: 1  MKALGIAATGMMAQQTNVDVISNNIANANTTG 32


>gi|328948268|ref|YP_004365605.1| flagellar basal-body rod protein FlgF [Treponema succinifaciens DSM
           2489]
 gi|328448592|gb|AEB14308.1| flagellar basal-body rod protein FlgF [Treponema succinifaciens DSM
           2489]
          Length = 266

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G  +  NVNV+ E   M E NR Y AN ++++    MM
Sbjct: 216 QGYTEASNVNVVNEMVQMIEVNRAYEANQKSVQTEDSMM 254



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG 36
          I  SG+  Q  R+  IS N+AN  TTG
Sbjct: 7  IGASGMNAQQNRLDTISNNLANVDTTG 33


>gi|319764541|ref|YP_004128478.1| flagellar basal-body rod protein flgg [Alicycliphilus denitrificans
           BC]
 gi|317119102|gb|ADV01591.1| flagellar basal-body rod protein FlgG [Alicycliphilus denitrificans
           BC]
          Length = 260

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 215 KQGFLETSNVNVVEELVTMIQTQRAYEMNSKAIQTSDQMLAKLSQL 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +G++ Q  ++ +IS N+AN  TTG       ++R +  FE++++ +
Sbjct: 1  MINSLWIAKTGMSAQQTQLDVISHNLANVSTTG-------FKRNSAVFEDLIYQN 48


>gi|241203124|ref|YP_002974220.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii
          WSM1325]
 gi|240857014|gb|ACS54681.1| protein of unknown function DUF1078 domain protein [Rhizobium
          leguminosarum bv. trifolii WSM1325]
          Length = 432

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 16/78 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG+  Q+ R+  +++NIAN  TTG       Y+  + SF  ++       +
Sbjct: 3  IFGSMKTAVSGMNAQANRLSTVADNIANVNTTG-------YKAVSTSFSSLVLPSSGGNY 55

Query: 57 GSGGVR--VKKIGVDQST 72
           SGGV+  V++   DQ  
Sbjct: 56 NSGGVQTSVRQAVSDQGD 73



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E+ R Y AN +  +   D+M   ++L R
Sbjct: 385 KSGALEGSNVDLAGELTEMIESQRSYTANSKVFQTGSDIMDVLVNLKR 432


>gi|42526517|ref|NP_971615.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC
           35405]
 gi|41816710|gb|AAS11496.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC
           35405]
          Length = 270

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NVNV+ E   M E NR Y AN ++I+    MM   
Sbjct: 222 QGFIEASNVNVVNEMVRMIEVNRAYEANQKSIQAEDTMMAKL 263



 Score = 45.3 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 11 ANSGLAVQSARMQIISENIANARTTG 36
          A SG+  Q  ++ +IS N+AN  TT 
Sbjct: 8  AASGMLAQQRQLDVISNNLANLDTTS 33


>gi|327193059|gb|EGE59971.1| flagellar hook protein [Rhizobium etli CNPAF512]
          Length = 434

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 16/78 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG+  Q+ R+  +S+NIAN  TTG       Y+  + SF  ++       +
Sbjct: 3  IFGSMKTAVSGMNAQANRLSTVSDNIANVNTTG-------YKAVSTSFSSLVLPSSGGNY 55

Query: 57 GSGGVR--VKKIGVDQST 72
           SGGV+  V++   DQ  
Sbjct: 56 NSGGVQTSVRQAVSDQGD 73



 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 387 KSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 434


>gi|84502379|ref|ZP_01000515.1| flagellar basal body rod protein FlgG [Oceanicola batsensis
           HTCC2597]
 gi|84389191|gb|EAQ01988.1| flagellar basal body rod protein FlgG [Oceanicola batsensis
           HTCC2597]
          Length = 261

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 78  DPGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +PG P       G ++  NVN++ +  D+    R Y  N ++I+ +  MM+T   +
Sbjct: 205 NPGDPAVGILRQGYLETSNVNIIQQITDLISAQRAYEMNSKSIETADQMMSTANQI 260



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 7/52 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + +  IA +G+  Q   + +IS NIANA TTG       ++    SF+++++
Sbjct: 1  MKALGIAATGMMAQQTNVDVISNNIANASTTG-------FKSARASFQDLLY 45


>gi|209547946|ref|YP_002279863.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii
          WSM2304]
 gi|209533702|gb|ACI53637.1| protein of unknown function DUF1078 domain protein [Rhizobium
          leguminosarum bv. trifolii WSM2304]
          Length = 433

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 16/78 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG+  Q+ R+  +++NIAN  TTG       Y+  + SF  ++       +
Sbjct: 3  IFGSMKTAVSGMNAQANRLSTVADNIANVNTTG-------YKAVSTSFSSLVLPSSGGNY 55

Query: 57 GSGGVR--VKKIGVDQST 72
           SGGV+  V++   DQ  
Sbjct: 56 NSGGVQSSVRQAVSDQGD 73



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E+ R Y AN +  +   D+M   ++L R
Sbjct: 386 KSGALEGSNVDLAGELTEMIESQRSYTANSKVFQTGSDIMDVLVNLKR 433


>gi|167905092|ref|ZP_02492297.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           NCTC 13177]
          Length = 258

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             G ++  NV V+ E  DM    R Y  N + +  + +M+   
Sbjct: 211 KQGALEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQQL 253



 Score = 45.3 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 7/66 (10%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I+ +GL  Q A++Q ++ N+AN  T G       ++R  + FE++ +        ++ 
Sbjct: 1  MWISKTGLQAQDAKLQAVANNLANVNTVG-------FKRDRVVFEDLFYRVERQPGAQLD 53

Query: 68 VDQSTF 73
           D ++ 
Sbjct: 54 QDNASP 59


>gi|94312671|ref|YP_585880.1| flagellar basal body distal rod protein [Cupriavidus metallidurans
           CH34]
 gi|93356523|gb|ABF10611.1| flagellar basal body distal rod protein [Cupriavidus metallidurans
           CH34]
          Length = 261

 Score = 58.0 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +  V+  NVNV+ E   M +T R Y  N + ++ S  M+     + 
Sbjct: 215 QNNYVEASNVNVVEELVSMIQTQRAYEINSKAVQTSDQMLQRLTQMG 261



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q  +M +IS N+AN  TTG       ++R    FEE+M+ +
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTTG-------FKRSRAVFEEMMYQT 48


>gi|296135671|ref|YP_003642913.1| flagellar basal-body rod protein FlgG [Thiomonas intermedia K12]
 gi|295795793|gb|ADG30583.1| flagellar basal-body rod protein FlgG [Thiomonas intermedia K12]
          Length = 261

 Score = 58.0 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NVNV+ E  DM  T R Y  N + +  S  M+ 
Sbjct: 215 QQGYLESSNVNVVAELVDMISTQRAYEVNSKAVTASDQMLQ 255



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S ++A +GL  +  RM +I+ N+AN  T+G       ++     F+++++ +
Sbjct: 1  MIRSLYVAKTGLEAEQTRMDVIANNLANVNTSG-------FKGSRAVFQDLLYQN 48


>gi|225158946|ref|ZP_03725258.1| flagellar basal-body rod protein FlgG [Opitutaceae bacterium TAV2]
 gi|224802441|gb|EEG20701.1| flagellar basal-body rod protein FlgG [Opitutaceae bacterium TAV2]
          Length = 260

 Score = 58.0 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN++ E  ++    R Y  + + I+ S +M+     L R
Sbjct: 216 YIESSNVNIVEEMVNLIVAQRAYEVSSKAIQTSDEMLQNVTQLKR 260



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A +G+  Q   +  I+ N+AN  T G       ++R  I F ++++ S
Sbjct: 8  AATGMEAQQLNLNTIANNLANVNTAG-------FKRSKIEFHDMLYQS 48


>gi|190890382|ref|YP_001976924.1| flagellar hook protein [Rhizobium etli CIAT 652]
 gi|190695661|gb|ACE89746.1| flagellar hook protein [Rhizobium etli CIAT 652]
          Length = 433

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 16/78 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG+  Q+ R+  +S+NIAN  TTG       Y+  + SF  ++       +
Sbjct: 3  IFGSMKTAVSGMNAQANRLSTVSDNIANVNTTG-------YKAVSTSFSSLVLPSSGGNY 55

Query: 57 GSGGVR--VKKIGVDQST 72
           SGGV+  V++   DQ  
Sbjct: 56 NSGGVQTSVRQAVSDQGD 73



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 386 KSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 433


>gi|331007439|ref|ZP_08330616.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC1989]
 gi|330418746|gb|EGG93235.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC1989]
          Length = 261

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NV+++ E  +M  T R Y  N + +  +  M+ 
Sbjct: 216 QGSLENSNVDIVEEMVNMITTQRAYEMNSKVVSTADQMLQ 255



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 10/57 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          M+    + +++ +GL+ Q  ++  IS N+ANA T G       ++R  ++FE++++ 
Sbjct: 1  MNP---ALYVSKTGLSAQDRQLTSISNNLANASTIG-------FKRDRVNFEDLLYQ 47


>gi|182680548|ref|YP_001834694.1| flagellar basal body rod protein FlgG [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636431|gb|ACB97205.1| flagellar basal-body rod protein FlgG [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 262

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NV+ + E  D+    R Y  N + I+ + +M T
Sbjct: 216 QGYLETSNVDPVKEITDLISAQRAYEMNSKVIQAADEMAT 255



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+A Q   +Q+I+ NIAN  TT        ++R    F ++++ +
Sbjct: 1  MKALSIAATGMAAQDLNVQVIANNIANMNTTA-------FKRARAEFTDLLYQA 47


>gi|325473455|gb|EGC76650.1| flagellar basal-body rod protein FlgG [Treponema denticola F0402]
          Length = 270

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NVNV+ E   M E NR Y AN ++I+    MM   
Sbjct: 222 QGFIEASNVNVVNEMVRMIEVNRAYEANQKSIQAEDTMMAKL 263



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 11 ANSGLAVQSARMQIISENIANARTTG 36
          A SG+  Q  ++ +IS N+AN  TT 
Sbjct: 8  AASGMLAQQRQLDVISNNLANLDTTS 33


>gi|320354701|ref|YP_004196040.1| hypothetical protein Despr_2613 [Desulfobulbus propionicus DSM
           2032]
 gi|320123203|gb|ADW18749.1| protein of unknown function DUF1078 domain protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 117

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 17/130 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I+    A SG    SA+++  + NIAN  T G       YR+  +     +  S    V
Sbjct: 1   MISGIQSALSGAQAFSAKIESNAHNIANLNTEG-------YRKSRVVLSAGVAQSVQATV 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIV--KYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            ++    +      +       A G    +  NV++  E  D+      Y ANL+T++ S
Sbjct: 54  GRV---DAPGPVVNEET-----AQGYAVRELSNVDLGEEIPDLMRNTHGYAANLRTVQVS 105

Query: 122 HDMMTTTLDL 131
            +M+ T LD+
Sbjct: 106 DNMLQTLLDI 115


>gi|304438315|ref|ZP_07398256.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368681|gb|EFM22365.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 264

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 5/91 (5%)

Query: 48  TISFEEVMHGSGGVRVKK---IGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETA 102
            I+    ++ +G   V K   +  D S    E +PG   A     G ++  NV ++ E  
Sbjct: 174 QITLARFVNPAGLTSVGKNLFVVSDASGEAIESNPGEDGAGTLTQGTLEMSNVQIVEEMV 233

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +M  + R Y +N + I  S  M+     L R
Sbjct: 234 NMIVSQRAYESNSKAITTSDSMLEIANQLKR 264



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGD 37
          ++ +   A SG+  Q ++M +++ NIAN  T G 
Sbjct: 1  MMRALWSAASGMKAQQSQMDVVAHNIANVNTYGG 34


>gi|253990125|ref|YP_003041481.1| flagellar basal-body rod protein flgg [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253781575|emb|CAQ84738.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Photorhabdus asymbiotica]
          Length = 260

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN+  E  +M +T R Y  N + +  S  M+     L
Sbjct: 218 YLETSNVNIAEELVNMIQTQRAYEVNSKAVSTSDQMLQKLTQL 260



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|238916189|ref|YP_002929706.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
           27750]
 gi|238871549|gb|ACR71259.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
           27750]
          Length = 256

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  N+NV+ E  DM    R + +N + +    +M+   + +
Sbjct: 209 QGYLEASNINVVTEMVDMISIARDFESNQKIMNTIDEMLGKMVSI 253



 Score = 47.2 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++   + A SGL VQ  R+ ++S N+ANA TTG
Sbjct: 1  MVKGLYTAYSGLTVQQKRLDVVSNNLANATTTG 33


>gi|299131785|ref|ZP_07024980.1| flagellar basal-body rod protein FlgG [Afipia sp. 1NLS2]
 gi|298591922|gb|EFI52122.1| flagellar basal-body rod protein FlgG [Afipia sp. 1NLS2]
          Length = 262

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 7/62 (11%)

Query: 79  PGHPVANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P   +ANA G        ++  NV V+ E +D+    R Y  N + +  +  MM +T  +
Sbjct: 201 PQDGLANADGFGDIQQGNLEQANVEVVSEISDLIAAQRAYEMNAKVVSAADQMMQSTTGM 260

Query: 132 LR 133
           LR
Sbjct: 261 LR 262



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          A +G+A Q   +Q+IS NIAN RTTG       Y+++  SF+++++     RV     DQ
Sbjct: 7  AATGMAAQELSVQVISNNIANLRTTG-------YKKQMASFQDLLYEHV-QRVGAQASDQ 58

Query: 71 STFVEE 76
           T +  
Sbjct: 59 GTVLPV 64


>gi|224437199|ref|ZP_03658180.1| flagellar basal body rod protein FlgG [Helicobacter cinaedi CCUG
           18818]
 gi|313143665|ref|ZP_07805858.1| flagellar basal body rod protein FlgG [Helicobacter cinaedi CCUG
           18818]
 gi|313128696|gb|EFR46313.1| flagellar basal body rod protein FlgG [Helicobacter cinaedi CCUG
           18818]
          Length = 262

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E  D+    R Y AN ++I+ +  M+ T   L R
Sbjct: 216 QGFLELSNVKLVEEMTDLITGQRAYEANSKSIQTADSMLQTVNGLKR 262



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 29/111 (26%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
          ++ S + A +G+  Q  ++   S NIAN  TTG       Y+++   F ++ +       
Sbjct: 1  MMRSLYTATTGMLGQQMQIDNTSNNIANVNTTG-------YKKQRAEFADLFYQVLQYAG 53

Query: 57 --------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
                     G+ V  IGV      + F  GHP    +      N++V +
Sbjct: 54 TSTSETTISPTGIEV-GIGVRPVAVQKMFSQGHPKETEN------NLDVAI 97


>gi|304317903|ref|YP_003853048.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779405|gb|ADL69964.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 266

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E  +M    R Y  N + I+ + DM++   +L R
Sbjct: 220 QGFLETSNVQVVNEMVNMIAAQRAYELNSKAIQAADDMLSIANNLRR 266



 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 30/110 (27%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------------ 58
           A SG+  Q   + +IS N+AN  TT        ++R    F+++M+ +            
Sbjct: 8   AASGMNAQQLNVDVISNNLANVNTTS-------FKRDRAEFQDLMYQTLQTEDVNAGQGK 60

Query: 59  -------GGVRVKKIGVD--QSTFVEEFDPGHPVANASGI--VKYPNVNV 97
                   GVR   I  D  + +  E  +P     +  G   V  P+ N 
Sbjct: 61  PVNMQVGVGVRPSAIVKDFSEGSLQETDNPLDVALDGEGFFAVLGPDGNT 110


>gi|120613061|ref|YP_972739.1| flagellar basal-body rod protein FlgG [Acidovorax citrulli AAC00-1]
 gi|326319099|ref|YP_004236771.1| flagellar basal-body rod protein FlgG [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|120591525|gb|ABM34965.1| flagellar basal-body rod protein FlgG [Acidovorax citrulli AAC00-1]
 gi|323375935|gb|ADX48204.1| flagellar basal-body rod protein FlgG [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 260

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 216 QGFLETSNVNVVEELVSMIQTQRAYEMNSKAIQTSDQMLAKLAQL 260



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +G++ Q  ++ +IS N+AN  TTG       Y+R    FE++++ +
Sbjct: 1  MINSLWIAKTGMSAQQTQLDVISHNLANVSTTG-------YKRNNAVFEDLIYQN 48


>gi|315185552|gb|EFU19321.1| flagellar basal-body rod protein FlgG [Spirochaeta thermophila DSM
           6578]
          Length = 264

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+V+ E  +M    R Y  N + ++ S  M+ T ++L R
Sbjct: 220 FLEMSNVSVVNEMVEMIVAQRAYELNSKAVQTSDSMLGTAVNLKR 264



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 34/74 (45%), Gaps = 10/74 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S   A SG+  Q   +  ++ N++N  TTG       +++  + F+++++ +    G
Sbjct: 1  MMRSLWTAASGMVGQQYHIDTVANNLSNVNTTG-------FKKNRVDFQDLIYQTVRMAG 53

Query: 61 VRVKKIGVDQSTFV 74
              ++ V  +   
Sbjct: 54 TPATEVTVVPTPTQ 67


>gi|330826757|ref|YP_004390060.1| flagellar basal-body rod protein FlgG [Alicycliphilus denitrificans
           K601]
 gi|329312129|gb|AEB86544.1| flagellar basal-body rod protein FlgG [Alicycliphilus denitrificans
           K601]
          Length = 260

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 215 KQGFLETSNVNVVEELVTMIQTQRAYEMNSKAIQTSDQMLAKLSQL 260



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +G++ Q  ++ +IS N+AN  TTG       ++R +  FE++++ +
Sbjct: 1  MINSLWIAKTGMSAQQTQLDVISHNLANVSTTG-------FKRNSAVFEDLIYQN 48


>gi|218461961|ref|ZP_03502052.1| flagellar hook protein FlgE [Rhizobium etli Kim 5]
          Length = 316

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 16/78 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG+  Q+ R+  +++NIAN  TTG       Y+  + SF  ++       +
Sbjct: 3  IFGSMKTAVSGMNAQANRLSTVADNIANVNTTG-------YKAVSTSFSSLVLPSSGGNY 55

Query: 57 GSGGVR--VKKIGVDQST 72
           SGGV+  V++   DQ  
Sbjct: 56 NSGGVQTSVRQAVSDQGD 73


>gi|307718428|ref|YP_003873960.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM 6192]
 gi|306532153|gb|ADN01687.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM 6192]
          Length = 264

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+V+ E  +M    R Y  N + ++ S  M+ T ++L R
Sbjct: 220 FLEMSNVSVVNEMVEMIVAQRAYELNSKAVQTSDSMLGTAVNLKR 264



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 34/74 (45%), Gaps = 10/74 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S   A SG+  Q   +  ++ N++N  TTG       +++  + F+++++ +    G
Sbjct: 1  MMRSLWTAASGMVGQQYHIDTVANNLSNVNTTG-------FKKNRVDFQDLIYQTVRMAG 53

Query: 61 VRVKKIGVDQSTFV 74
              ++ V  +   
Sbjct: 54 TPATEVTVVPTPTQ 67


>gi|188997557|ref|YP_001931808.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932624|gb|ACD67254.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 266

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN++ E  ++    R Y  N + I  + +M+  T+  L+
Sbjct: 220 QGFLEMSNVNIVEEMVNLIVAQRAYEVNSKGIITADEML-KTVSTLK 265



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 38/131 (29%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           ++ +   + SG+  Q   + +IS NIAN  T G       ++R   +FE++++       
Sbjct: 1   MLRALWTSASGMEAQQTNLDVISHNIANVNTVG-------FKRSRANFEDLIYQDVRDPG 53

Query: 58  ---------------SGGVRVKKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                            GV+V  +     Q + ++  +P        G  K       +E
Sbjct: 54  VLSSTQNRVPAGIQIGLGVKVSDVAKMFSQGSLMKTDNPLDVAIQGEGFFK-------IE 106

Query: 101 TADMRET-NRL 110
             D  E   R 
Sbjct: 107 MPDGSEAFTRA 117


>gi|116250500|ref|YP_766338.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. viciae
          3841]
 gi|115255148|emb|CAK06222.1| flagellar hook protein (agr_c_1012p) [Rhizobium leguminosarum bv.
          viciae 3841]
          Length = 433

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 16/78 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG+  Q+ R+  +++NIAN  TTG       Y+  + SF  ++       +
Sbjct: 3  IFGSMKTAVSGMNAQANRLSTVADNIANVNTTG-------YKAVSTSFSSLVLPSSGGNY 55

Query: 57 GSGGVR--VKKIGVDQST 72
           SGGV+  V++   DQ  
Sbjct: 56 NSGGVQTSVRQAVSDQGD 73



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV++  E  +M E+ R Y AN +  +   D+M   ++L R
Sbjct: 386 KAGALEGSNVDLAGELTEMIESQRSYTANSKVFQTGSDIMDVLVNLKR 433


>gi|312794500|ref|YP_004027423.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312876698|ref|ZP_07736678.1| fagellar hook-basal body protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796538|gb|EFR12887.1| fagellar hook-basal body protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|312181640|gb|ADQ41810.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 255

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NVN + E  DM    R Y AN +      + +   + ++ R
Sbjct: 207 QGYLEGSNVNSVQEMVDMISVLRAYEANQKAFTIQDETLQKAVNEIAR 254



 Score = 35.3 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I   + + SG+ +    M I + N+AN  TTG
Sbjct: 1  MIRGIYTSASGMILNQKLMDITANNVANVSTTG 33


>gi|87306342|ref|ZP_01088489.1| FlgF [Blastopirellula marina DSM 3645]
 gi|87290521|gb|EAQ82408.1| FlgF [Blastopirellula marina DSM 3645]
          Length = 255

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 79  PGHPVANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLL 132
           P  P+A        G ++   VN + E   M E  R Y AN+  IK   +M+   +  +L
Sbjct: 193 PVEPLALEERQTRAGYLEGSGVNSITEMMTMIEAQRAYEANVNLIKNHDEMLGNLISRVL 252

Query: 133 R 133
           R
Sbjct: 253 R 253


>gi|310659662|ref|YP_003937383.1| flagellar component of cell-distal portion of basal-body rod
           [Clostridium sticklandii DSM 519]
 gi|308826440|emb|CBH22478.1| flagellar component of cell-distal portion of basal-body rod
           [Clostridium sticklandii]
          Length = 266

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  D+S   + +          G ++  NV ++ E   M    R Y  N ++I+ + DMM
Sbjct: 208 IEEDESKDTKLY---------QGFLETSNVQLVDEMVRMIMAQRAYEINSKSIQTADDMM 258

Query: 126 TTTLDLLR 133
            T   L R
Sbjct: 259 QTVNSLKR 266



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 11 ANSGLAVQSARMQIISENIANARTTG 36
          A SG+  Q   M  IS N+AN  TTG
Sbjct: 7  AASGMRAQQLNMDTISNNLANVNTTG 32


>gi|254182892|ref|ZP_04889485.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1655]
 gi|254299684|ref|ZP_04967133.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           406e]
 gi|157809479|gb|EDO86649.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           406e]
 gi|184213426|gb|EDU10469.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1655]
          Length = 262

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             G ++  NV V+ E  DM    R Y  N + +  + +M+   
Sbjct: 215 KQGALEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQQL 257



 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +  I+ +GL  Q A++Q ++ N+AN  T G       ++R  + FE++ +       
Sbjct: 1  MNQAMWISKTGLQAQDAKLQAVANNLANVNTVG-------FKRDRVVFEDLFYRVERQPG 53

Query: 64 KKIGVDQSTF 73
           ++  D ++ 
Sbjct: 54 AQLDQDNASP 63


>gi|332298513|ref|YP_004440435.1| flagellar basal-body rod protein FlgF [Treponema brennaborense DSM
           12168]
 gi|332181616|gb|AEE17304.1| flagellar basal-body rod protein FlgF [Treponema brennaborense DSM
           12168]
          Length = 265

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G  +  NVNV+ E   M E NR Y AN +TI+    MM+T 
Sbjct: 216 QGYTETSNVNVVNEMVSMIEVNRAYEANQKTIQTEDTMMSTL 257



 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 7/41 (17%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          I +SG+  Q  R+  IS N+ANA TT        Y+R    
Sbjct: 7  IGSSGMNAQQNRLDAISNNLANADTTA-------YKRDVTV 40


>gi|296283228|ref|ZP_06861226.1| flagellar basal body rod protein FlgG [Citromicrobium bathyomarinum
           JL354]
          Length = 261

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A G V+  NVN + E   +    R Y  N + +K + +M+ TT  L
Sbjct: 215 AQGFVEASNVNPVAEITALITAQRAYEMNSRVVKTADEMLGTTSQL 260



 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + S  IA +G+  Q   + +IS NIAN  TTG       ++R+   F+++++  
Sbjct: 1  MRSLSIAGTGMLAQQTNVDVISNNIANMNTTG-------FKRQRAQFQDLLYQQ 47


>gi|294339841|emb|CAZ88204.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Thiomonas sp. 3As]
          Length = 261

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ E  DM  T R Y  N + +  S  M+ 
Sbjct: 216 QGYLESSNVNVVAELVDMISTQRAYEVNSKAVTASDQMLQ 255



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S ++A +GL  +  RM +I+ N+AN  T+G       ++     F+++++ +
Sbjct: 1  MIRSLYVAKTGLEAEQTRMDVIANNLANVNTSG-------FKGSRAVFQDLLYQN 48


>gi|197122909|ref|YP_002134860.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter sp. K]
 gi|220917701|ref|YP_002493005.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|196172758|gb|ACG73731.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter sp. K]
 gi|219955555|gb|ACL65939.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 266

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A G ++  NV  + E  DM  T R Y  N + ++ +  M+     L
Sbjct: 220 AQGFLEGANVKAVEEMIDMIATQRAYELNSRVVQTADQMLQRLTSL 265



 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
           ++ S + A +G+  Q  RM +I+ N+AN  TTG       ++R+   FE+++
Sbjct: 5  PVLRSLYTAATGMEAQQLRMDVIANNLANTGTTG-------FKRQRAEFEDLL 50


>gi|126444737|ref|YP_001061248.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           668]
 gi|126224228|gb|ABN87733.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           668]
          Length = 262

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             G ++  NV V+ E  DM    R Y  N + +  + +M+   
Sbjct: 215 KQGALEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQQL 257



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +  I+ +GL  Q A++Q ++ N+AN  T G       ++R  + FE++ +       
Sbjct: 1  MNQAMWISKTGLQAQDAKLQAVANNLANVNTVG-------FKRDRVVFEDLFYRVERQPG 53

Query: 64 KKIGVDQSTF 73
           ++  D ++ 
Sbjct: 54 AQLDQDNASP 63


>gi|218460753|ref|ZP_03500844.1| flagellar basal body rod protein FlgG [Rhizobium etli Kim 5]
          Length = 244

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 5/52 (9%)

Query: 80  GHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G+P          G ++  NV+ + E  ++    R Y  N + I  + +M +
Sbjct: 186 GNPDEEGFGYMKQGYLESSNVDPVKEITELISAQRAYEMNSKVITTADEMAS 237


>gi|89056684|ref|YP_512135.1| flagellar basal body rod protein FlgG [Jannaschia sp. CCS1]
 gi|88866233|gb|ABD57110.1| flagellar basal-body rod protein FlgG [Jannaschia sp. CCS1]
          Length = 261

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 8/72 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA +G++ Q  R+ +IS NIAN  TTG +P       +   F + +H    VR  
Sbjct: 1  MRALDIAATGMSAQQLRVDVISNNIANMSTTGYSP-------RRADFAD-LHYQQMVRAG 52

Query: 65 KIGVDQSTFVEE 76
           I     T V  
Sbjct: 53 AINASDGTVVPA 64



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G V+  +V+ + E  D+ E  R Y  N + +  +  ++  T
Sbjct: 216 QGYVEQSSVDAVREITDLIEAQRGYELNAKVLTAADQILGAT 257


>gi|146295641|ref|YP_001179412.1| hypothetical protein Csac_0595 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409217|gb|ABP66221.1| protein of unknown function DUF1078 domain protein
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 267

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E   +    R Y  N + I+ + DM++   +L R
Sbjct: 221 QGFLEMSNVQVVDEMVKLIIAQRAYEINSKAIQTADDMLSMANNLKR 267



 Score = 41.5 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + + A  G+  Q   + IIS N+AN  TT 
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTA 33


>gi|146341904|ref|YP_001206952.1| flagellar basal body rod protein FlgG [Bradyrhizobium sp. ORS278]
 gi|146194710|emb|CAL78735.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Bradyrhizobium sp. ORS278]
          Length = 262

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV+V+ E +++    R Y  N + I  +  MM +T  L R
Sbjct: 216 QGSLEQANVDVVSEMSELIAAQRAYEMNAKVISAADQMMQSTTALFR 262



 Score = 41.1 bits (96), Expect = 0.059,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + + H A +G+A Q   +Q+IS NIAN RTTG       ++++T +F+++
Sbjct: 1  MQALHTAATGMAAQELNVQVISNNIANLRTTG-------FKKQTAAFQDL 43


>gi|157373205|ref|YP_001471805.1| flagellar basal-body rod protein FlgG [Shewanella sediminis
           HAW-EB3]
 gi|157315579|gb|ABV34677.1| flagellar basal-body rod protein FlgG [Shewanella sediminis
           HAW-EB3]
          Length = 261

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  ++ +  DQ+                G ++  NVNV+ E  +M  T R Y  N +
Sbjct: 196 GASGAAIEGVAGDQAIGQLR----------QGALEGANVNVVEEMVEMISTQRAYEMNAK 245

Query: 117 TIKQSHDMM 125
            +  S DM+
Sbjct: 246 VVSASDDML 254



 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       ++R  ++F ++        G
Sbjct: 1  MQSALWVSKTGLTAQDVKMTTIANNLANVNTTG-------FKRDRVAFNDLFYQTQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V ++    S    
Sbjct: 54 GQVDELNELPSGLQL 68


>gi|134280724|ref|ZP_01767434.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           305]
 gi|167725932|ref|ZP_02409168.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           DM98]
 gi|125657220|gb|ABN48708.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei]
 gi|134247746|gb|EBA47830.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           305]
          Length = 262

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             G ++  NV V+ E  DM    R Y  N + +  + +M+   
Sbjct: 215 KQGALEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQQL 257



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +  I+ +GL  Q A++Q ++ N+AN  T G       ++R  + FE++ +       
Sbjct: 1  MNQAMWISKTGLQAQDAKLQAVANNLANVNTVG-------FKRDRVVFEDLFYRVERQPG 53

Query: 64 KKIGVDQSTF 73
           ++  D ++ 
Sbjct: 54 AQLDQDNASP 63


>gi|209884526|ref|YP_002288383.1| flagellar basal-body rod protein FlgG [Oligotropha carboxidovorans
           OM5]
 gi|209872722|gb|ACI92518.1| flagellar basal-body rod protein FlgG [Oligotropha carboxidovorans
           OM5]
          Length = 262

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV V+ E +D+    R Y  N + +  +  MM +T  +LR
Sbjct: 215 QQGNLEQANVEVVSEISDLIAAQRAYEMNAKVVSAADQMMQSTTGMLR 262



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          A +G+A Q   +Q+IS NIAN RTTG       Y+++  SF+++++     RV     DQ
Sbjct: 7  AATGMAAQELSVQVISNNIANLRTTG-------YKKQMASFQDLLYEHV-QRVGAQASDQ 58

Query: 71 STFVEE 76
           T +  
Sbjct: 59 GTVLPV 64


>gi|312794499|ref|YP_004027422.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312876700|ref|ZP_07736680.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796540|gb|EFR12889.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|312181639|gb|ADQ41809.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 267

 Score = 57.2 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E   +    R Y  N + I+ + DM++   +L R
Sbjct: 221 QGFLEMSNVQVVDEMVKLIIAQRAYEINSKAIQTADDMLSMANNLKR 267



 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + + A  G+  Q   + IIS N+AN  TT 
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTA 33


>gi|255021356|ref|ZP_05293404.1| Flagellar basal-body rod protein flgG [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969219|gb|EET26733.1| Flagellar basal-body rod protein flgG [Acidithiobacillus caldus
           ATCC 51756]
          Length = 261

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVNV+ E  DM  T R Y  N + +  S  M+   + 
Sbjct: 215 QQGYLESSNVNVVSELVDMIATQRAYEINSKAVSTSDSMLGYAIQ 259



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S ++A +GL  +  +M +I+ N+AN  TTG       +++    F+++++ +
Sbjct: 1  MMRSLYVAATGLEGEQTKMDVIANNLANVNTTG-------FKQSRAVFQDLLYQN 48


>gi|90415316|ref|ZP_01223250.1| flagellar basal-body rod protein FlgG (distal rod protein) [marine
           gamma proteobacterium HTCC2207]
 gi|90332639|gb|EAS47809.1| flagellar basal-body rod protein FlgG (distal rod protein) [marine
           gamma proteobacterium HTCC2207]
          Length = 261

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 5/50 (10%)

Query: 82  PVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           P A+ +G++     +  NVNV+ E  +M ET R Y  N + I  +  M+ 
Sbjct: 206 PGADGAGMLMQGALEASNVNVVEEMVNMIETQRAYEVNSKAISAADGMLR 255



 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 13/78 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
          MD   AS  IA +GL  Q  RM +IS N+AN  TTG       +++    FE++++ +  
Sbjct: 1  MD---ASLWIAKTGLTAQQTRMSVISNNLANVNTTG-------FKKDRAVFEDLLYQNIV 50

Query: 59 -GGVRVKKIGVDQSTFVE 75
            G +V       +  + 
Sbjct: 51 PAGGQVDAESETPTGLML 68


>gi|312126442|ref|YP_003991316.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776461|gb|ADQ05947.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 267

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E   +    R Y  N + I+ + DM++   +L R
Sbjct: 221 QGFLEMSNVQVVDEMVKLIIAQRAYEINSKAIQTADDMLSMANNLKR 267



 Score = 41.1 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + + A  G+  Q   + IIS N+AN  TT 
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTA 33


>gi|148256792|ref|YP_001241377.1| flagellar basal body rod protein FlgG [Bradyrhizobium sp. BTAi1]
 gi|146408965|gb|ABQ37471.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Bradyrhizobium sp. BTAi1]
          Length = 262

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV+V+ E +++    R Y  N + I  +  MM +T  L R
Sbjct: 216 QGSLEQANVDVVSEMSELIAAQRAYEMNAKVISAADQMMQSTTALFR 262



 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + + H A +G+A Q   +Q+IS NIAN RTTG       ++++T +F+++
Sbjct: 1  MQALHTAATGMAAQELNVQVISNNIANLRTTG-------FKKQTAAFQDL 43


>gi|117926379|ref|YP_866996.1| flagellar basal-body rod protein FlgG [Magnetococcus sp. MC-1]
 gi|117610135|gb|ABK45590.1| flagellar basal-body rod protein FlgG [Magnetococcus sp. MC-1]
          Length = 263

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN++ E  +M  + R Y  N +T++ + DM+     + R
Sbjct: 219 YLELSNVNMVEEMVNMIASQRAYEINSKTVQTADDMLGKVASMKR 263



 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I +   + +G+  Q   + +I+ N+AN  T G       ++R    F+++++ +
Sbjct: 1  MIRALWTSATGMQAQQTNIDVIANNLANTNTAG-------FKRSRADFQDLLYQN 48


>gi|257095357|ref|YP_003168998.1| flagellar basal-body rod protein FlgG [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047881|gb|ACV37069.1| flagellar basal-body rod protein FlgG [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 260

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 5/58 (8%)

Query: 79  PGHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P  P  N SG      V+  NVNV  E   M +T R Y  N + +  S  M+     L
Sbjct: 203 PNTPGTNGSGVVVQNYVEASNVNVAQELVLMIQTQRAYELNAKVVSTSDQMLARLTQL 260



 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANART 34
          +I S   A++GL  Q  ++ II+ N+AN  T
Sbjct: 1  MIRSLWTASTGLTAQQVQIDIIANNLANVST 31


>gi|329297209|ref|ZP_08254545.1| Flagellar basal-body rod protein flgG [Plautia stali symbiont]
          Length = 260

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV  E   M +T R Y  N + I  S  M+     L
Sbjct: 218 YVETSNVNVAEELVTMIQTQRAYEINSKAISTSDQMLQKLTQL 260



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R    FE++M+ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRSRAVFEDLMYQT 48


>gi|86157777|ref|YP_464562.1| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774288|gb|ABC81125.1| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 266

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A G ++  NV  + E  DM  T R Y  N + ++ +  M+     L
Sbjct: 220 AQGFLEGANVKAVEEMIDMIATQRAYELNSRVVQTADQMLQRLTSL 265



 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
            ++ S + A +G+  Q  RM +I+ N+AN  TTG       ++R+   FE+++
Sbjct: 4  SPVLRSLYTAATGMEAQQLRMDVIANNLANTGTTG-------FKRQRAEFEDLL 50


>gi|302872712|ref|YP_003841348.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575571|gb|ADL43362.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 267

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E   +    R Y  N + I+ + DM++   +L R
Sbjct: 221 QGFLEMSNVQVVDEMVKLIIAQRAYEINSKAIQTADDMLSMANNLKR 267



 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + + A  G+  Q   + IIS N+AN  TT 
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTA 33


>gi|296531727|ref|ZP_06894555.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
           49957]
 gi|296267943|gb|EFH13742.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
           49957]
          Length = 260

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NVNV+ E   +    R Y  N + I+ +  M+ T 
Sbjct: 215 QGYLEASNVNVVQEITQLIAAQRAYEMNSKVIEATDQMLQTA 256



 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + + +IA +G+  Q   +++I+ NIAN  TT  T       R+   F+++++ SG
Sbjct: 1  MRAMNIAATGMQAQQTNVEVIAHNIANVSTTAFT-------RRKAEFQDLLYQSG 48


>gi|163758015|ref|ZP_02165103.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
 gi|162284304|gb|EDQ34587.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
          Length = 262

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV+ + E  D+    R Y  N + I+ + +M +T    LR
Sbjct: 215 QQGYLEGSNVDPIKEITDLISAQRAYEMNSKIIQAADEMASTVSKNLR 262



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + +  IA +G+  Q   +++I+ N+AN  TTG       ++R    F ++++ 
Sbjct: 1  MKALAIAATGMNAQQLNLEVIANNVANINTTG-------FKRARAEFADLLYQ 46


>gi|171059410|ref|YP_001791759.1| flagellar basal-body rod protein FlgG [Leptothrix cholodnii SP-6]
 gi|170776855|gb|ACB34994.1| flagellar basal-body rod protein FlgG [Leptothrix cholodnii SP-6]
          Length = 260

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           + G ++  NVNV+ E   M +T R Y  N + I  S  M+     L
Sbjct: 215 SQGFLETSNVNVVEELVTMIQTQRAYELNSKAISTSDQMLQKLGQL 260



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +  I+ +G+  Q  ++ ++S N+AN  T G       Y++    FE++M+ +
Sbjct: 1  MMRALWISKTGMEAQQTQLDVVSNNLANVATNG-------YKKSHAVFEDLMYQT 48


>gi|168699693|ref|ZP_02731970.1| flagellar basal body rod protein FlgG [Gemmata obscuriglobus UQM
           2246]
          Length = 263

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV+V+ E  ++    R Y  N + ++ + +M+ +T DL+R
Sbjct: 217 QGFLERSNVDVVTELINLILAQRAYEFNTRAVRTADNMLASTTDLIR 263



 Score = 41.5 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 34/110 (30%), Gaps = 22/110 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTG----------------DTPGSDPYRRK 47
           +I +   + +G+ VQ+  +   S NIAN  T G                  PGSD     
Sbjct: 1   MIKALFTSATGMNVQTTAIDNTSNNIANVNTNGFKKGQADFQDLLYVSQRAPGSDAAAGL 60

Query: 48  TISFEEVMHGSGGVRVKKIGV--DQSTFVEEFDPGHPVANASGI--VKYP 93
            +     +    G RV  I         V   +P        G   V  P
Sbjct: 61  QVP--TGLQIGSGARVAGITKVFTPGALVNTQNPFDVAVEGEGFFQVTLP 108


>gi|237755437|ref|ZP_04584062.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692401|gb|EEP61384.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 266

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN++ E  ++    R Y  N + I  + +M+  T+  L+
Sbjct: 220 QGFLEMSNVNIVEEMVNLIVAQRAYEVNSKGIITADEML-RTVSTLK 265



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 38/131 (29%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           ++ +   + SG+  Q   + +IS NIAN  T G       ++R   +FE++++       
Sbjct: 1   MLRALWTSASGMEAQQTNLDVISHNIANVNTVG-------FKRSRANFEDLIYQDVRDPG 53

Query: 58  ---------------SGGVRVKKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                            GV+V  +     Q + ++  +P        G  K       +E
Sbjct: 54  VLSSTQNRVPAGIQIGLGVKVSDVAKMFSQGSLMKTDNPLDVAIQGEGFFK-------IE 106

Query: 101 TADMRET-NRL 110
             D  E   R 
Sbjct: 107 MPDGSEAFTRA 117


>gi|42526518|ref|NP_971616.1| flagellar basal body rod protein FlgG [Treponema denticola ATCC
           35405]
 gi|41816711|gb|AAS11497.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC
           35405]
 gi|325473456|gb|EGC76651.1| flagellar basal-body rod protein FlgG [Treponema denticola F0402]
          Length = 264

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+ + E  +M    R Y  N + I+ S +M+ T + L R
Sbjct: 220 FLEMSNVSTVSEMVNMIVAQRAYEFNSKAIQTSDNMLGTAVSLKR 264



 Score = 40.7 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 34/73 (46%), Gaps = 9/73 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A +G+  Q A +  ++ N+AN  T+G       ++++   FE++++ +  V+ 
Sbjct: 1  MVRSLWTAATGMNTQQANIDTVANNLANVNTSG-------FKKQRAEFEDLIYQT--VKT 51

Query: 64 KKIGVDQSTFVEE 76
                + T    
Sbjct: 52 AGTPATEDTITPV 64


>gi|90423017|ref|YP_531387.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisB18]
 gi|90105031|gb|ABD87068.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB18]
          Length = 262

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 7/62 (11%)

Query: 79  PGHPVANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P   +ANA G        ++  NV V+ E +D+    R Y  N + +  +  M+ +T ++
Sbjct: 201 PQDGIANADGYGDIQQQTLEQANVEVVTEISDLIAAQRAYEMNAKVVSAADQMLQSTSNM 260

Query: 132 LR 133
            R
Sbjct: 261 FR 262



 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 7/44 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          A +G+A Q   +Q+IS NIAN RTTG       ++++  +F+++
Sbjct: 7  AATGMAAQELNVQVISNNIANMRTTG-------FKKQRAAFQDL 43


>gi|206889889|ref|YP_002248123.1| flagellar hook protein FlgE [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741827|gb|ACI20884.1| flagellar hook protein FlgE [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 434

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M    R Y AN++ I  + +M+   ++++R
Sbjct: 392 EASNVDLAEEFIRMIAAQRAYQANVRVITTTDNMLNELMNIVR 434



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 8/66 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVR 62
          ++ S     SGL      + +I +NIANA T G       ++    +F +++  + GG  
Sbjct: 1  MLTSLFTGISGLNANGLALSVIGDNIANANTVG-------FKASRANFADILSQTLGGAS 53

Query: 63 VKKIGV 68
            ++G 
Sbjct: 54 AMQVGR 59


>gi|145297456|ref|YP_001140297.1| lateral flagellar basal-body rod protein LfgG [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142850228|gb|ABO88549.1| lateral flagellar basal-body rod protein LfgG [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 261

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            NVNV+ E  DM  T R Y  N + +  +  M+
Sbjct: 222 SNVNVVEEMVDMITTQRAYEMNAKVVSAADQML 254



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + A+  ++ +GL+ Q A+M  IS N+AN  T G       ++R  ++FE++ + 
Sbjct: 1  MHAALWVSKTGLSAQDAKMASISNNLANVNTVG-------FKRDRVAFEDLFYQ 47


>gi|237755390|ref|ZP_04584017.1| flagellar basal body and hook protein FlgE [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692431|gb|EEP61412.1| flagellar basal body and hook protein FlgE [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 413

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  ++    R Y AN + I     ++   +++ R
Sbjct: 367 SGFLELSNVDISREFINLITAQRAYQANARVITTDDQILQEAMNIKR 413



 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          ++ S + A +GL      + +IS+NIAN  T G       ++ + ++FE++
Sbjct: 1  MLQSFYTAITGLNGNQQWLNVISDNIANVNTIG-------FKSERVTFEDL 44


>gi|167576664|ref|ZP_02369538.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           TXDOH]
          Length = 258

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV V+ E  DM    R Y  N + +  + +M+ 
Sbjct: 211 KQGALEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQ 251



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 7/66 (10%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I+ +GL  Q A++Q ++ N+AN  T G       ++R  + FE++ +        ++ 
Sbjct: 1  MWISKTGLQAQDAKLQAVANNLANVNTVG-------FKRDRVVFEDLFYRVERQPGAQLD 53

Query: 68 VDQSTF 73
           D ++ 
Sbjct: 54 QDNASP 59


>gi|15639944|ref|NP_219397.1| flagellar basal body rod protein FlgG [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189026183|ref|YP_001933955.1| flagellar basal body rod protein FlgG [Treponema pallidum subsp.
           pallidum SS14]
 gi|3323281|gb|AAC65915.1| flagellar basal-body rod protein (flgG-1) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189018758|gb|ACD71376.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|291060315|gb|ADD73050.1| flagellar basal-body rod protein FlgG [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 264

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+ + E  +M    R Y  N + I+ S +M+ T + L R
Sbjct: 220 FLEMSNVSTVSEMVNMIVAQRAYEFNSKAIQTSDNMLGTAVALKR 264



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A +G+  Q A +  ++ N+AN  T+G       ++R+   FE++++ +
Sbjct: 1  MVRSLWTAATGMNGQQANIDTVANNLANVNTSG-------FKRQRAEFEDLLYQT 48


>gi|225849153|ref|YP_002729317.1| flagellar hook protein FlgE [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643172|gb|ACN98222.1| flagellar hook protein FlgE [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 409

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  ++    R Y AN + I     ++   +++ R
Sbjct: 363 SGFLELSNVDISKEFINLITAQRAYQANARVITTDDQILQEAMNIKR 409



 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL      + +IS+NIAN  T G       ++ + ++FE+++  S
Sbjct: 1  MLQSFYTAVSGLNGNQKWIDVISDNIANVNTIG-------FKSERVTFEDLVAKS 48


>gi|221636048|ref|YP_002523924.1| flagellar hook protein FlgE [Thermomicrobium roseum DSM 5159]
 gi|221157294|gb|ACM06412.1| flagellar hook protein FlgE [Thermomicrobium roseum DSM 5159]
          Length = 423

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ASG ++  NV++  E   M    R + AN + I  S +++   ++L R
Sbjct: 376 ASGYLEMSNVDLAQEFTSMIMAQRGFQANSRVITTSDEVLQELVNLRR 423



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 4/36 (11%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
          M  + ++     SGL      M +I  NIAN  TTG
Sbjct: 2  MRSMFSAI----SGLRAHQTWMDVIGNNIANVNTTG 33


>gi|312621332|ref|YP_004022945.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201799|gb|ADQ45126.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 267

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E   +    R Y  N + I+ + DM++   +L R
Sbjct: 221 QGFLEMSNVQVVDEMVKLIIAQRAYEINSKAIQTADDMLSMANNLKR 267



 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + + A  G+  Q   + IIS N+AN  TT 
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTA 33


>gi|224370760|ref|YP_002604924.1| flagellar basal body rod protein FlgG [Desulfobacterium
           autotrophicum HRM2]
 gi|223693477|gb|ACN16760.1| FlgG2 [Desulfobacterium autotrophicum HRM2]
          Length = 260

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A+  ++  NV+V+ E  +M    R Y AN ++I+ +  M+     L R
Sbjct: 213 ANNFLEMSNVSVVEEMVNMIVGQRAYEANSKSIQTADTMLGLANGLKR 260



 Score = 40.7 bits (95), Expect = 0.075,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 31/58 (53%), Gaps = 7/58 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          +I +   + +G+  Q  +  +++ N+AN+ T G       +++   +F+++M+ +  V
Sbjct: 1  MIRALWTSATGMNAQQIQTDVVANNLANSSTAG-------FKKSRANFQDLMYQTMLV 51


>gi|323341378|ref|ZP_08081622.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
           25644]
 gi|323091255|gb|EFZ33883.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
           25644]
          Length = 301

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  + + M   +R Y AN ++I  S +M+   L+L R
Sbjct: 254 ESGFLEMSNVDLADQFSQMIIASRAYQANSRSITTSDEMLQELLNLKR 301


>gi|238927617|ref|ZP_04659377.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
 gi|238884542|gb|EEQ48180.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
          Length = 264

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 5/91 (5%)

Query: 48  TISFEEVMHGSGGVRVKK---IGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETA 102
            I+    ++ +G   V K   +  D S    E +PG   A     G ++  NV ++ E  
Sbjct: 174 QITLARFVNPAGLTAVGKNLFVVSDASGEAIESNPGEDGAGTLTQGTLEMSNVQIVEEMV 233

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +M  + R Y +N + I  S  M+     L R
Sbjct: 234 NMIVSQRAYESNSKAITTSDSMLEIANQLKR 264



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGD 37
          ++ +   A SG+  Q ++M +++ NIAN  T G 
Sbjct: 1  MMRALWSAASGMKAQQSQMDVVAHNIANVNTYGG 34


>gi|289523332|ref|ZP_06440186.1| flagellar basal-body rod protein FlgG [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503024|gb|EFD24188.1| flagellar basal-body rod protein FlgG [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 262

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E   M  + R Y AN +TI+ + +++    +L R
Sbjct: 216 QGALEMSNVQVVEEMVSMIVSQRAYEANSKTIQTADELLQIANNLRR 262



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           +G+  Q + + +IS N+AN  TTG       Y++    FE++++  G
Sbjct: 9  ATGMIAQQSNLDVISNNLANVNTTG-------YKKIRAEFEDLIYQIG 49


>gi|256751339|ref|ZP_05492218.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256749721|gb|EEU62746.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 266

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  N+ ++ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 220 QGFLETSNIQIVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 12/78 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSG- 59
          ++ +   A SG+  Q   + +I+ N+AN  TT        ++    +T+  E V  G G 
Sbjct: 1  MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60

Query: 60 --------GVRVKKIGVD 69
                  GVR+  I  D
Sbjct: 61 PVNMQVGVGVRLSAIVKD 78


>gi|222530298|ref|YP_002574180.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222457145|gb|ACM61407.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 267

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E   +    R Y  N + I+ + DM++   +L R
Sbjct: 221 QGFLEMSNVQVVDEMVKLIIAQRAYEINSKAIQTADDMLSMANNLKR 267



 Score = 41.1 bits (96), Expect = 0.057,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + + A  G+  Q   + IIS N+AN  TT 
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTA 33


>gi|116626490|ref|YP_828646.1| flagellar basal-body rod protein FlgG [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116229652|gb|ABJ88361.1| flagellar basal-body rod protein FlgG [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 263

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G  +  NV+V+ E  ++    R Y AN + +K + DM     +L R
Sbjct: 217 QGYTEQSNVSVVEEFINLIVAQRGYEANSKVVKAADDMYQQVNNLTR 263



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + A SG+  Q   +  I+ N+ANA T G       Y+ +   F+++++ +
Sbjct: 1  MIRALYSAASGMTAQQLNVDNIAHNLANANTAG-------YKMRRAQFQDLIYQT 48


>gi|167038784|ref|YP_001661769.1| hypothetical protein Teth514_0111 [Thermoanaerobacter sp. X514]
 gi|300913631|ref|ZP_07130948.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307723354|ref|YP_003903105.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
 gi|166853024|gb|ABY91433.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter sp. X514]
 gi|300890316|gb|EFK85461.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307580415|gb|ADN53814.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
          Length = 266

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  N+ ++ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 220 QGFLETSNIQIVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 16/107 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSG- 59
           ++ +   A SG+  Q   + +I+ N+AN  TT        ++    +T+  E V  G G 
Sbjct: 1   MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60

Query: 60  --------GVRVKKIGVD--QSTFVEEFDPGHPVANASGI--VKYPN 94
                   GVR   I  D  + +  +  +P     +  G   V  P+
Sbjct: 61  PVNMQVGVGVRPSAIVKDFTEGSLQQTENPLDLALDGEGFFAVLGPD 107


>gi|295097201|emb|CBK86291.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 260

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVNV  E  +M +  R Y  N + +  S  M+     L
Sbjct: 218 YIETSNVNVAEELVNMIQVQRAYEINSKAVSASDQMLQRLTQL 260



 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   F+++++ +
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVNTNG-------FKRQRAVFQDLLYQT 48


>gi|226225729|ref|YP_002759835.1| flagellar hook protein FlgE [Gemmatimonas aurantiaca T-27]
 gi|226088920|dbj|BAH37365.1| flagellar hook protein FlgE [Gemmatimonas aurantiaca T-27]
          Length = 506

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M    R + AN + +  S +M+   + + R
Sbjct: 460 SGALEMSNVDLAQEFTNMIVAQRGFQANGKVVSTSDEMLQELMTIKR 506



 Score = 41.1 bits (96), Expect = 0.050,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          ++ S +   SGL     RM +I  NIAN  T         ++   ++F+E
Sbjct: 1  MLRSLYAGVSGLRNNQVRMDVIGNNIANVNTVA-------FKAGRVTFKE 43


>gi|86356312|ref|YP_468204.1| flagellar basal body rod protein FlgG [Rhizobium etli CFN 42]
 gi|86280414|gb|ABC89477.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
          Length = 262

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 5/52 (9%)

Query: 80  GHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G+P          G ++  NV+ + E  ++    R Y  N + I  + +M +
Sbjct: 204 GNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAYEMNSKVITTADEMAS 255



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTG-------FKRARAEFTDLLYQT 47


>gi|328545505|ref|YP_004305614.1| flagellar basal-body rod protein FlgG [polymorphum gilvum
          SL003B-26A1]
 gi|326415246|gb|ADZ72309.1| Flagellar basal-body rod protein FlgG [Polymorphum gilvum
          SL003B-26A1]
          Length = 262

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 11/71 (15%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
          + +  IA +G++ Q   +++I+ NIAN  TT        Y+R    F ++++ +    GV
Sbjct: 1  MKALAIAATGMSAQQLNVEVIANNIANMNTTA-------YKRARAEFSDLLYQAERLQGV 53

Query: 62 RVKKIGVDQST 72
            +  G D   
Sbjct: 54 PNRG-GEDPVP 63



 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G  +  NV+ + E  ++    R Y  N + I+ + DM 
Sbjct: 216 QGYQEASNVDPVKEITELISAQRGYEMNSKVIQAADDMA 254


>gi|218886713|ref|YP_002436034.1| hypothetical protein DvMF_1618 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757667|gb|ACL08566.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 525

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV+V  E  D+    R Y AN + I    +M+ T L L R
Sbjct: 485 SNVDVSTEMVDLIVMQRAYQANSKVITTVDEMLQTALGLKR 525



 Score = 33.4 bits (76), Expect = 10.0,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 11/57 (19%)

Query: 4  LIASAHIANSGL--AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L +S + + SGL    +S  + +I  N+AN+ TTG       Y+  ++ FE+V + S
Sbjct: 3  LSSSMYASVSGLLSTAES--ISVIGNNLANSSTTG-------YKSMSMLFEDVFYSS 50


>gi|103488389|ref|YP_617950.1| flagellar basal body rod protein FlgG [Sphingopyxis alaskensis
           RB2256]
 gi|98978466|gb|ABF54617.1| Flagellar basal-body rod FlgG [Sphingopyxis alaskensis RB2256]
          Length = 261

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G+++  NVNV+ E  DM ET R Y  N + I  + +MM   
Sbjct: 217 GMLEGSNVNVVEELVDMIETQRAYEVNSKMISATDEMMKNA 257



 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + + H+A +GL  QS RMQ+I+ N+AN  TTG       ++R   SFE +
Sbjct: 3  LGALHVARTGLDAQSFRMQVIANNLANVNTTG-------FKRDRASFETL 45


>gi|271500068|ref|YP_003333093.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech586]
 gi|270343623|gb|ACZ76388.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech586]
          Length = 260

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV  E   M +T R Y  N + I  +  M+     L
Sbjct: 218 YVETSNVNVAEELVSMIQTQRAYEINSKAISSTDQMLQKLTQL 260



 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+ +
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMYQT 48


>gi|225850267|ref|YP_002730501.1| flagellar basal body and hook protein FlgE [Persephonella marina
           EX-H1]
 gi|225644919|gb|ACO03105.1| flagellar basal body and hook protein FlgE [Persephonella marina
           EX-H1]
          Length = 540

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  ++    R Y AN +TI  S  ++  T+++ R
Sbjct: 495 GFLELSNVDISREFINLITAQRAYQANARTITTSDQVLQETMNIKR 540



 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S +  N+GL      + +IS+NIAN  T G       ++ + ++FE+++  S
Sbjct: 1  MIQSFYTGNAGLNANKNWLSVISDNIANVNTIG-------FKAERVNFEDLISSS 48


>gi|74101660|gb|AAZ99750.1| FlgGL [Aeromonas hydrophila]
          Length = 275

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            NVNV+ E  DM  T R Y  N + +  +  M+
Sbjct: 236 SNVNVVEEMVDMITTQRAYEMNAKVVSAADQML 268



 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + A+  ++ +GL+ Q A+M  IS N+AN  T G       ++R  ++FE++ + 
Sbjct: 15 MHAALWVSKTGLSAQDAKMASISNNLANVNTVG-------FKRDRVAFEDLFYQ 61


>gi|302338304|ref|YP_003803510.1| flagellar basal-body rod protein FlgG [Spirochaeta smaragdinae DSM
           11293]
 gi|301635489|gb|ADK80916.1| flagellar basal-body rod protein FlgG [Spirochaeta smaragdinae DSM
           11293]
          Length = 264

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 5/60 (8%)

Query: 79  PGHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           PG P  +  G      ++  NV+V+ E  +M    R Y  N + I+ S  M+     L R
Sbjct: 205 PGRPGFDGMGQTVQRFLEMSNVSVVQEMVNMIVAQRAYELNSKAIQTSDTMLGIANSLKR 264



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 7/58 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          ++ S   A SG+  Q   +  IS N++N  TTG       +++    FE++++ +  V
Sbjct: 1  MMRSLWTAASGMTGQQFNIDTISNNLSNVNTTG-------FKKNRADFEDLLYQTSRV 51


>gi|307721135|ref|YP_003892275.1| flagellar basal-body rod protein FlgG [Sulfurimonas autotrophica
           DSM 16294]
 gi|306979228|gb|ADN09263.1| flagellar basal-body rod protein FlgG [Sulfurimonas autotrophica
           DSM 16294]
          Length = 262

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NV ++VE  D+    R Y AN + I  S +M+ TT +L R
Sbjct: 216 QGFVELSNVELVVELTDLITGQRAYDANSKIITTSDEMLQTTNNLKR 262



 Score = 34.9 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S + A++G+     ++   + NIAN  T G
Sbjct: 1  MMQSLYTASTGMLGMQTQIDTTANNIANVNTIG 33


>gi|220934396|ref|YP_002513295.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995706|gb|ACL72308.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 263

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVN + E  +M ET R Y  N + I  +  M+ 
Sbjct: 216 QGFLESSNVNTVEELVNMIETQRAYEMNSKAISTADQMLQ 255



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  IA +GL  Q  RM +IS N+AN  TTG       +++    F+++++ +
Sbjct: 1  MNKALWIAKTGLDAQQTRMSVISNNLANVNTTG-------FKKGRAVFQDLIYQT 48


>gi|225850285|ref|YP_002730519.1| flagellar basal-body rod protein FlgG [Persephonella marina EX-H1]
 gi|225645911|gb|ACO04097.1| flagellar basal-body rod protein FlgG [Persephonella marina EX-H1]
          Length = 266

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A G ++  NVN++ E  ++    R Y  N + I  + +M+ 
Sbjct: 219 AQGFLEASNVNIVEEMVNLIVAQRAYEINSKGIITADEMLR 259



 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          +I +   + SG+  Q   + +IS NIAN  T G       ++R   +FE++
Sbjct: 1  MIRALWTSASGMGAQQTNLDVISNNIANVNTVG-------FKRSRANFEDL 44


>gi|241203106|ref|YP_002974202.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856996|gb|ACS54663.1| flagellar basal-body rod protein FlgG [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 262

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 5/52 (9%)

Query: 80  GHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G+P          G ++  NV+ + E  ++    R Y  N + I  + +M +
Sbjct: 204 GNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAYEMNSKVITTADEMAS 255



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTG-------FKRARAEFSDLLYQT 47


>gi|167626155|ref|YP_001676449.1| flagellar hook protein FlgE [Shewanella halifaxensis HAW-EB4]
 gi|167356177|gb|ABZ78790.1| flagellar basal body FlaE domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 402

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           A G ++  NV+   E  ++    R Y +N + +  +  M    L+
Sbjct: 356 AGGYLEGSNVDQTAEMVNLMTAQRNYQSNAKVLDTNSTMQQALLN 400



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 9/59 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRV 63
          S +IA SGL   +  +  IS NIAN+ T G       +R     F  + +G  +GGV V
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANSSTVG-------FRSGRSEFSAIYNGGQAGGVNV 53


>gi|116250482|ref|YP_766320.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115255130|emb|CAK06204.1| flgG [Rhizobium leguminosarum bv. viciae 3841]
          Length = 262

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 5/52 (9%)

Query: 80  GHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G+P          G ++  NV+ + E  ++    R Y  N + I  + +M +
Sbjct: 204 GNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAYEMNSKVITTADEMAS 255



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTG-------FKRARAEFSDLLYQT 47


>gi|307945666|ref|ZP_07661002.1| flagellar basal-body rod protein FlgG [Roseibium sp. TrichSKD4]
 gi|307771539|gb|EFO30764.1| flagellar basal-body rod protein FlgG [Roseibium sp. TrichSKD4]
          Length = 260

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 80  GHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            +P  N  G V     +  NV+ + E AD+    R Y  N + IK + +M +TT
Sbjct: 203 DNPGGNGFGNVQQYFLEMANVDAVTEIADLISAQRAYEMNSRVIKAADEMYSTT 256



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + + HIA +G+  Q   +++IS N+AN RTTG       Y+R+ + F+++M+ +
Sbjct: 1  MKALHIAATGMKAQERNVEVISNNVANLRTTG-------YKRQRVDFQDLMYQN 47


>gi|149183418|ref|ZP_01861851.1| flagellar basal-body rod protein [Bacillus sp. SG-1]
 gi|148848863|gb|EDL63080.1| flagellar basal-body rod protein [Bacillus sp. SG-1]
          Length = 280

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 1/67 (1%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMT 126
            D     + ++ G       G ++  NV+      DM    R + AN + ++     M  
Sbjct: 211 EDNEPLADAYNSGATFNMQQGFIERSNVDTARTMTDMMTAYRAFEANQKILQAYDRSMEK 270

Query: 127 TTLDLLR 133
              ++ R
Sbjct: 271 AVNEIGR 277


>gi|188997539|ref|YP_001931790.1| protein of unknown function DUF1078 domain protein
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932606|gb|ACD67236.1| protein of unknown function DUF1078 domain protein
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 413

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  ++    R Y AN + I     ++   +++ R
Sbjct: 367 SGFLELSNVDISREFINLITAQRAYQANARVITTDDQILQEAMNIKR 413



 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A +GL      + +IS+NIAN  T G       ++ + ++FE+++  S
Sbjct: 1  MLQSFYTAITGLNGNQQWLNVISDNIANVNTIG-------FKSERVTFEDLVAHS 48


>gi|320537132|ref|ZP_08037104.1| flagellar basal-body rod protein FlgG [Treponema phagedenis F0421]
 gi|320146005|gb|EFW37649.1| flagellar basal-body rod protein FlgG [Treponema phagedenis F0421]
          Length = 264

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+ + E  +M    R Y  N + I+ S +M+ T + L R
Sbjct: 220 FLEMSNVSTVSEMVNMIVAQRAYEFNSKAIQTSDNMLGTAVGLKR 264



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S   A SG+  Q A +  ++ N+AN  T+G       ++++   FE++++ +
Sbjct: 1  MIRSLWTAASGMNSQQANIDTVANNLANVNTSG-------FKKQRAEFEDLLYQT 48


>gi|224825166|ref|ZP_03698272.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
 gi|224602837|gb|EEG09014.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
          Length = 260

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NVNV  E  +M    R +  N + IK + +M+     L
Sbjct: 216 SGFLEDSNVNVTEELVNMITAQRSFEMNSRAIKTADEMLQRIAQL 260



 Score = 37.2 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ + +IA +G+     ++ ++S N+AN+ T G       +++    FE++ + +
Sbjct: 1  MMRALYIAKTGMDSSQFQLDVVSNNLANSNTKG-------FKKGHAVFEDLYYQT 48


>gi|257457574|ref|ZP_05622741.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
           35580]
 gi|257444960|gb|EEV20036.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
           35580]
          Length = 264

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+ + E  +M    R Y  N + I+ S +M+ T + L R
Sbjct: 220 FLEMSNVSTVSEMVNMIVAQRAYEFNSKAIQTSDNMLGTAVGLKR 264



 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A +G+  Q A +  ++ N+AN  T+G       ++++   FE++++ +
Sbjct: 1  MVRSLWTAATGMNSQQANIDTVANNLANVNTSG-------FKKQRAEFEDLLYQT 48


>gi|56551505|ref|YP_162344.1| flagellar basal body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241761149|ref|ZP_04759238.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260752888|ref|YP_003225781.1| flagellar basal body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|4378856|gb|AAD19724.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|56543079|gb|AAV89233.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374768|gb|EER64229.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552251|gb|ACV75197.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 263

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 82  PVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           P  +  G +     +  NVN++ E  DM ET R Y  N + +K S +M+ 
Sbjct: 207 PQQDGMGYILQGELEQSNVNIVQELVDMIETQRAYEVNSKMVKASDEMLQ 256



 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 7/51 (13%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
            +A +GL  Q+ RM+II+ N+AN  TT        ++R   +FE + + +
Sbjct: 6  LQVARTGLDAQNTRMRIIANNLANVNTTA-------FKRDRAAFETLAYQA 49


>gi|229825258|ref|ZP_04451327.1| hypothetical protein GCWU000182_00611 [Abiotrophia defectiva ATCC
           49176]
 gi|229790630|gb|EEP26744.1| hypothetical protein GCWU000182_00611 [Abiotrophia defectiva ATCC
           49176]
          Length = 274

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV+   E  +M  T R Y  N + I  S +M+    +L R
Sbjct: 227 KSGYLEGSNVSAADEMVNMIVTQRAYQLNSKAITASDEMLEQANNLRR 274



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S   A SG+  Q   +  IS NIAN  TTG
Sbjct: 1  MLRSLWSAASGMMAQQVNLDTISNNIANINTTG 33


>gi|126463746|ref|YP_001044860.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides
          ATCC 17029]
 gi|126105410|gb|ABN78088.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          ATCC 17029]
          Length = 261

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R+ +IS N+AN  TTG       Y  +   F ++
Sbjct: 1  MKALQIAATGMSAQQTRVDVISNNLANMSTTG-------YNARRADFADL 43



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  ++ +  R Y  N + I  +  M+  T
Sbjct: 216 QGYLEESSVDSVQEITELIKAQRGYELNAKVITAADQMLAAT 257


>gi|37360908|dbj|BAC98362.1| flagellar basal-body rod protein [Burkholderia glumae]
          Length = 251

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV  E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 205 QGYVESSNVNVXQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQM 249



 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNAQQAQMDVISNNLANVSTNG-------FKGSRAVFEDLLYQT 37


>gi|115523556|ref|YP_780467.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisA53]
 gi|115517503|gb|ABJ05487.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           BisA53]
          Length = 262

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 7/62 (11%)

Query: 79  PGHPVANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P    ANA G        ++  NV  + E +D+    R Y  N + +  +  M+ +T ++
Sbjct: 201 PQDGTANADGYGDIQQQTLEQANVEAVTEISDLISAQRAYEMNAKVVSAADQMLQSTSNM 260

Query: 132 LR 133
            R
Sbjct: 261 FR 262



 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 8/66 (12%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          A +G+  Q   +Q+IS NIAN RTT        ++++  +F+++++     RV     DQ
Sbjct: 7  AATGMMAQELNVQVISNNIANMRTTA-------FKKQRAAFQDLIYDHVK-RVGAQASDQ 58

Query: 71 STFVEE 76
           T +  
Sbjct: 59 GTILPV 64


>gi|258511107|ref|YP_003184541.1| hypothetical protein Aaci_1117 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257477833|gb|ACV58152.1| protein of unknown function DUF1078 domain protein
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 69

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN+  +  D+ +  R Y AN      +  M  T L + +
Sbjct: 30  NVNLTTQMVDLIQATRAYQANATAFDAAKQMAVTALSIGK 69



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPG----SDPYRRKTISFEEVMH 56
          S +I+ SGLA     + +I+ NIAN   T         +  Y+    +F+    
Sbjct: 6  SMNISASGLAANQLWLNVIANNIANVNLTTQMVDLIQATRAYQANATAFDAAKQ 59


>gi|190890363|ref|YP_001976905.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|218516082|ref|ZP_03512922.1| flagellar basal body rod protein FlgG [Rhizobium etli 8C-3]
 gi|190695642|gb|ACE89727.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 262

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 5/52 (9%)

Query: 80  GHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G+P          G ++  NV+ + E  ++    R Y  N + I  + +M +
Sbjct: 204 GNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAYEMNSKVITTADEMAS 255



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTG-------FKRARAEFTDLLYQT 47


>gi|163794152|ref|ZP_02188125.1| Flagellar basal body rod protein [alpha proteobacterium BAL199]
 gi|159180766|gb|EDP65285.1| Flagellar basal body rod protein [alpha proteobacterium BAL199]
          Length = 261

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G V+  NV+ + E  ++    R Y  N + I+ S  MM+
Sbjct: 215 QQGFVEASNVDPVHEITNLITAQRAYELNSKIIETSDQMMS 255



 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 7/53 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + S +IA++G+A Q   +++IS NIAN  TTG       Y+R+   F+++++ 
Sbjct: 1  MQSLNIASTGMAAQQFNVEVISNNIANMNTTG-------YKRQRAEFQDLLYQ 46


>gi|83944162|ref|ZP_00956618.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. EE-36]
 gi|83845029|gb|EAP82910.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. EE-36]
          Length = 261

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  NVN++ +  D+    R Y  N + I+ +  +MTTT  +
Sbjct: 216 QGYLEQSNVNIIQQITDLISAQRAYEMNSKAIETADQIMTTTNQI 260



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q   + +I+ NIANA TTG   G   ++
Sbjct: 1  MKALGIAATGMLAQQTNVDVIANNIANANTTGFKSGRAAFQ 41


>gi|77464904|ref|YP_354408.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides
          2.4.1]
 gi|77389322|gb|ABA80507.1| putative flagellar basal body rod protein [Rhodobacter
          sphaeroides 2.4.1]
          Length = 261

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + +  IA +G++ Q  R+ +IS N+AN  TTG       Y  +   F ++ +   
Sbjct: 1  MKALQIAATGMSAQQTRVDVISNNLANMSTTG-------YNARRADFADLHYQQA 48



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  ++ +  R Y  N + I  +  M+  T
Sbjct: 216 QGYLEESSVDSVQEITELIKAQRGYELNAKVITAADQMLAAT 257


>gi|110632656|ref|YP_672864.1| flagellar basal body rod protein FlgG [Mesorhizobium sp. BNC1]
 gi|110283640|gb|ABG61699.1| flagellar basal-body rod protein FlgG [Chelativorans sp. BNC1]
          Length = 262

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV+ + E  ++    R Y  N + I  + +M  T    +R
Sbjct: 215 EQGYLEASNVDPVKEITELISAQRAYEMNSKVITAADEMAATVTQAMR 262



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + +  IA +G++ Q   +++I+ NIAN  TTG       ++R    F ++++ 
Sbjct: 1  MKALSIAATGMSAQQTNLEVIANNIANINTTG-------FKRARAEFSDLLYQ 46


>gi|332980934|ref|YP_004462375.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
 gi|332698612|gb|AEE95553.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
          Length = 264

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E A M    R Y  N + ++ + +M+     + R
Sbjct: 218 QGFLEASNVDIADEMARMIRAQRAYQLNARVLQTADEMIGLANSIRR 264



 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I +   A +GL  Q   +  I+ NIAN  TT 
Sbjct: 1  MIQALWTAGAGLISQQYNVDTIANNIANVDTTA 33


>gi|304317904|ref|YP_003853049.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779406|gb|ADL69965.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 248

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           A   G ++  NVN + E   M    R Y AN +T+    + +   + ++ R
Sbjct: 197 AVKQGYLEGSNVNPVDEMVTMISAMRTYEANQKTVSAFDETLDKAVNEVGR 247



 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++   + A+SG+  Q   + ++S NIAN  T+G
Sbjct: 1  MLRGLYTASSGMIAQQKIVDVLSNNIANVNTSG 33


>gi|241113584|ref|YP_002973419.1| protein of unknown function DUF1078 domain protein [Rhizobium
          leguminosarum bv. trifolii WSM1325]
 gi|240861792|gb|ACS59458.1| protein of unknown function DUF1078 domain protein [Rhizobium
          leguminosarum bv. trifolii WSM1325]
          Length = 430

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 31/61 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A SG++ Q+ R+  +S+NIANA TTG    S  +    +      + SGGV+ 
Sbjct: 3  IFGSMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSGNYNSGGVQT 62

Query: 64 K 64
           
Sbjct: 63 S 63



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 383 QSGALESSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 430


>gi|83955138|ref|ZP_00963794.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. NAS-14.1]
 gi|83840467|gb|EAP79640.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. NAS-14.1]
          Length = 261

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  NVN++ +  D+    R Y  N + I+ +  +MTTT  +
Sbjct: 216 QGYLEQSNVNIIQQITDLISAQRAYEMNSKAIETADQIMTTTNQI 260



 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q   + +I+ NIANA TTG   G   ++
Sbjct: 1  MKALGIAATGMLAQQTNVDVIANNIANANTTGFKSGRAAFQ 41


>gi|68164544|gb|AAY87273.1| predicted flagellar basal body rod protein [uncultured bacterium
          BAC17H8]
          Length = 262

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 12/66 (18%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +S H+A +GL  Q  RMQII+ N+AN  TTG       ++R   +FE +++     +V+
Sbjct: 3  TSSMHVAKTGLNAQQTRMQIIANNLANVNTTG-------FKRDRANFETLLY-----QVR 50

Query: 65 KIGVDQ 70
          ++  DQ
Sbjct: 51 RVAGDQ 56



 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ E  +M ET R Y  + ++I    +M+ 
Sbjct: 217 QGALESSNVNVVTELVEMIETQRAYEVSSKSITSVDEMLR 256


>gi|221640825|ref|YP_002527087.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides
          KD131]
 gi|332559802|ref|ZP_08414124.1| FlgG2 [Rhodobacter sphaeroides WS8N]
 gi|221161606|gb|ACM02586.1| Flagellar basal-body rod protein FlgG precursor [Rhodobacter
          sphaeroides KD131]
 gi|332277514|gb|EGJ22829.1| FlgG2 [Rhodobacter sphaeroides WS8N]
          Length = 261

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R+ +IS N+AN  TTG       Y  +   F ++
Sbjct: 1  MKALQIAATGMSAQQTRVDVISNNLANMSTTG-------YNARRADFADL 43



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  ++ +  R Y  N + I  +  M+  T
Sbjct: 216 QGYLEESSVDSVQEITELIKAQRGYELNAKVITAADQMLAAT 257


>gi|157959902|ref|YP_001499936.1| flagellar hook protein FlgE [Shewanella pealeana ATCC 700345]
 gi|157844902|gb|ABV85401.1| flagellar basal body FlaE domain protein [Shewanella pealeana ATCC
           700345]
          Length = 402

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++G ++  NV+   E  ++    R Y +N + +  +  M    L+
Sbjct: 356 SAGYLEGSNVDQTAEMVNLMTAQRNYQSNAKVLDTNSTMQQALLN 400



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 9/61 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIAN+ T G       +R     F  + +G  +GGV V 
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANSSTVG-------FRSGRSEFSAIYNGGQAGGVNVM 54

Query: 65 K 65
           
Sbjct: 55 S 55


>gi|261344140|ref|ZP_05971784.1| flagellar basal-body rod protein FlgG [Providencia rustigianii DSM
           4541]
 gi|282567732|gb|EFB73267.1| flagellar basal-body rod protein FlgG [Providencia rustigianii DSM
           4541]
          Length = 260

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G+++  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGMLETSNVNVAEELVNMIQTQRAYEINSKAVSASDQMLQRLTQL 260



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   + +IS N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNG-------FKRQRAVFEDLLYQN 48


>gi|121596119|ref|YP_988015.1| flagellar basal-body rod protein FlgG [Acidovorax sp. JS42]
 gi|222112274|ref|YP_002554538.1| flagellar basal-body rod protein flgg [Acidovorax ebreus TPSY]
 gi|120608199|gb|ABM43939.1| flagellar basal-body rod protein FlgG [Acidovorax sp. JS42]
 gi|221731718|gb|ACM34538.1| flagellar basal-body rod protein FlgG [Acidovorax ebreus TPSY]
          Length = 260

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 215 KQGFLENSNVNVVEELVTMIQTQRAYEMNSKAIQTSDQMLAKLSQL 260



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S  IA +G+  Q  ++ +IS N+AN  TTG       ++R    FE++++ +
Sbjct: 1  MMNSLWIAKTGMTAQQTQLDVISHNLANVSTTG-------FKRNNAVFEDLIYQN 48


>gi|308050022|ref|YP_003913588.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
           9799]
 gi|307632212|gb|ADN76514.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
           9799]
          Length = 261

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV ++ I  D +    +           G ++  NVNV+ E  +M  T R Y  N +
Sbjct: 196 AASGVAIEGIPGDAAIGQLK----------QGTLEGANVNVVEEMVEMISTQRAYEMNAK 245

Query: 117 TIKQSHDMM 125
            +  + DM+
Sbjct: 246 VVSSTDDML 254



 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       ++R  +SF ++ + + 
Sbjct: 1  MQSALWVSKTGLTAQDTKMTTIANNLANVNTTG-------FKRDRVSFNDLFYQTQ 49


>gi|311694363|gb|ADP97236.1| flagellar basal-body rod protein FlgG [marine bacterium HP15]
          Length = 262

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G V+  NV V+ E  +M  T R Y  N + +  +  M+ 
Sbjct: 215 EQGSVESSNVEVVEELVNMITTQRAYEMNSKVVSTTDQMLQ 255



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +GL+ Q   M  IS N+AN  TTG       ++R    F+++++ 
Sbjct: 7  VSKTGLSAQDTNMSTISNNLANVNTTG-------FKRDRAVFQDLLYQ 47


>gi|209547928|ref|YP_002279845.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533684|gb|ACI53619.1| flagellar basal-body rod protein FlgG [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 262

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 5/52 (9%)

Query: 80  GHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G+P          G ++  NV+ + E  ++    R Y  N + I  + +M +
Sbjct: 204 GNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAYEMNSKVITTADEMAS 255



 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTG-------FKRARAEFSDLLYQT 47


>gi|119384847|ref|YP_915903.1| flagellar basal body rod protein FlgG [Paracoccus denitrificans
          PD1222]
 gi|119374614|gb|ABL70207.1| flagellar basal-body rod protein FlgG [Paracoccus denitrificans
          PD1222]
          Length = 261

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + +  IA SG++ Q  R+ +IS N+AN  TTG       Y  +   F ++ +   
Sbjct: 1  MRALQIAASGMSAQQMRVDVISNNLANMSTTG-------YNARRAEFADLQYQQA 48



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +G ++  +V+ + E A++ +  R Y  N + I  +  M+ TT+ 
Sbjct: 216 AGFLEESSVDPVREIAELIKAQRGYELNSKVITAADQMLGTTVQ 259


>gi|212709494|ref|ZP_03317622.1| hypothetical protein PROVALCAL_00536 [Providencia alcalifaciens DSM
           30120]
 gi|212687832|gb|EEB47360.1| hypothetical protein PROVALCAL_00536 [Providencia alcalifaciens DSM
           30120]
          Length = 260

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G+++  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 216 QGMLETSNVNVAEELVNMIQTQRAYEINSKAVSASDQMLQRLTQL 260



 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   + +IS N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNG-------FKRQRAVFEDLLYQN 48


>gi|116248740|ref|YP_764581.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. viciae
          3841]
 gi|115253390|emb|CAK11778.1| putative flagellar hook protein flgE [Rhizobium leguminosarum bv.
          viciae 3841]
          Length = 430

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 31/61 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A SG++ Q+ R+  +S+NIANA TTG    S  +    +      + SGGV+ 
Sbjct: 3  IFGSMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSGNYNSGGVQT 62

Query: 64 K 64
           
Sbjct: 63 S 63



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 383 QSGALESSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 430


>gi|258592496|emb|CBE68805.1| putative Flagellar hook protein flgE [NC10 bacterium 'Dutch
           sediment']
          Length = 412

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E  ++    R Y AN Q I  ++ +  TTL+LLR
Sbjct: 366 AGALEQSNVDLGTELVNLIIAQRGYEANAQVISVANQIQQTTLNLLR 412



 Score = 41.1 bits (96), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 7/51 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          +++   A +GL      + +I  NIANA TTG       Y+     F E++
Sbjct: 1  MSTFSTAITGLKAYQTDLGVIGNNIANANTTG-------YKASRAQFSELL 44


>gi|83716996|ref|YP_438391.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           E264]
 gi|167614839|ref|ZP_02383474.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           Bt4]
 gi|257141424|ref|ZP_05589686.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           E264]
 gi|83650821|gb|ABC34885.1| flagellar basal-body rod protein FlgG [Burkholderia thailandensis
           E264]
          Length = 262

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             G ++  NV V+ E  DM    R Y  N + +  + +M+   
Sbjct: 215 KQGALEGANVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQQL 257



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +  I+ +GL  Q A++Q I+ N+AN  T G       ++R  + FE++ +       
Sbjct: 1  MNQAMWISKTGLQAQDAKLQAIANNLANVNTIG-------FKRDRVVFEDLFYRIERQPG 53

Query: 64 KKIGVDQSTF 73
           ++  D ++ 
Sbjct: 54 AQLDQDNASP 63


>gi|222084865|ref|YP_002543394.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722313|gb|ACM25469.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 262

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV+ + E  D+    R Y  N + I  + DM  
Sbjct: 215 KQGYLESSNVDPVKEITDLITAQRAYEMNSKVITTADDMAQ 255



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       Y+R    F ++++ +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTG-------YKRSRAEFSDLLYQT 47


>gi|144897832|emb|CAM74696.1| flagellar basal body distal rod protein; FlgG [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 261

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  NVNV+ E  ++    R Y  N + I+ S +MM+T   L
Sbjct: 216 QGFLETSNVNVVAEVTNLISAQRAYEMNSKVIQTSDEMMSTINQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + S +IA +G+  Q   +++IS NIAN  TT        Y ++   F ++++ +
Sbjct: 1  MRSLNIAATGMLAQQTNVEVISNNIANMNTTA-------YTKRRPEFSDLLYQN 47


>gi|312876506|ref|ZP_07736489.1| fagellar hook-basal body protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796717|gb|EFR13063.1| fagellar hook-basal body protein [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 494

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E  DM  T R Y AN + I  S +++   +++ R
Sbjct: 448 QGTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDLVNIKR 494



 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 11/55 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M  + +S     S L     RM +I +NIAN  T G       ++   ++F  V 
Sbjct: 2  MRSMFSSI----SALRAHQTRMDVIGDNIANVNTVG-------FKSSRVTFASVF 45


>gi|260767925|ref|ZP_05876859.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|260615955|gb|EEX41140.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|315179628|gb|ADT86542.1| flagellar basal-body rod protein FlgG [Vibrio furnissii NCTC 11218]
          Length = 261

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G+++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGVLEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 10/68 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPG 53

Query: 61 VRVKKIGV 68
           +V ++  
Sbjct: 54 AQVDQVNE 61


>gi|257457573|ref|ZP_05622740.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
           35580]
 gi|257444959|gb|EEV20035.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
           35580]
          Length = 271

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G V+  N+ V+ E   M E NR Y AN +TI+    MM+  
Sbjct: 222 QGFVEASNIKVVNEMVRMIEVNRAYEANQKTIQSEDTMMSKL 263



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 7/36 (19%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          A SG+  Q  ++ +I++N+ANA TT        Y+R
Sbjct: 8  AASGMNAQQKQLDVIAQNLANADTTS-------YKR 36


>gi|312136040|ref|YP_004003378.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
           OL]
 gi|311776091|gb|ADQ05578.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
           OL]
          Length = 255

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NVN + E  +M    R Y AN +      + +   + ++ R
Sbjct: 207 QGYLEGSNVNSVQEMVNMINVLRAYEANQKAFTIQDETLQKAISEIAR 254



 Score = 35.3 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I   + + SG+ +    M I + N+AN  TTG
Sbjct: 1  MIRGIYTSASGMILNQKLMDITANNVANVSTTG 33


>gi|77463650|ref|YP_353154.1| flagellar distal rod protein [Rhodobacter sphaeroides 2.4.1]
 gi|126462482|ref|YP_001043596.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          ATCC 17029]
 gi|221639493|ref|YP_002525755.1| Flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          KD131]
 gi|332558506|ref|ZP_08412828.1| FlgG [Rhodobacter sphaeroides WS8N]
 gi|11095160|gb|AAG29749.1|AF205139_1 flagellar distal rod protein [Rhodobacter sphaeroides]
 gi|77388068|gb|ABA79253.1| Flagellar distal rod protein [Rhodobacter sphaeroides 2.4.1]
 gi|126104146|gb|ABN76824.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          ATCC 17029]
 gi|221160274|gb|ACM01254.1| Flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          KD131]
 gi|332276218|gb|EGJ21533.1| FlgG [Rhodobacter sphaeroides WS8N]
          Length = 262

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 10/71 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
            + H+A++GL  Q  RMQ+IS N+AN  TTG       ++R   +FE +++ +   GG 
Sbjct: 3  TNAMHVASTGLNAQQTRMQVISNNLANVNTTG-------FKRDRANFESLLYQTWKPGGA 55

Query: 62 RVKKIGVDQST 72
          +  +     S 
Sbjct: 56 QTSEATAMTSP 66



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 23/40 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ E  DM ET R Y  N ++I  S +MM 
Sbjct: 217 QGSLEASNVNVVQELVDMIETQRAYEVNSKSISASDEMMQ 256


>gi|291276427|ref|YP_003516199.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
 gi|290963621|emb|CBG39453.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
          Length = 262

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV ++ E  D+    R Y AN ++I+ +  M+ T   L R
Sbjct: 215 KQGFLELSNVRLVEEMTDLITGQRAYEANSKSIQTADAMLQTVNGLKR 262



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A +G+  Q  ++   S NIAN  T G       Y+R+   F ++ + +
Sbjct: 1  MMRSLYSATTGMLGQQLQIDTTSNNIANVNTVG-------YKRQRAEFNDLFYQN 48


>gi|163789641|ref|ZP_02184079.1| flagellar hook protein [Carnobacterium sp. AT7]
 gi|159875173|gb|EDP69239.1| flagellar hook protein [Carnobacterium sp. AT7]
          Length = 289

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M  T+R Y AN ++I  S  M+   ++L R
Sbjct: 243 SGFLEMSNVDLANEFTEMIVTSRSYQANSRSITTSDTMLEELINLKR 289



 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 21/82 (25%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
          ++ S +   +G+     +M +IS NIAN  TT    G        + FE+++  +     
Sbjct: 1  MLKSLYSGVTGMKNIQTKMDVISNNIANVNTTAFKTG-------RVRFEDMLSQTNASAQ 53

Query: 60 ----------GVRVKKIGVDQS 71
                    GV+V  I    S
Sbjct: 54 TGINAQQVGLGVQVGSIDTVMS 75


>gi|292669970|ref|ZP_06603396.1| flagellar basal-body rod protein FlgG [Selenomonas noxia ATCC
           43541]
 gi|292648382|gb|EFF66354.1| flagellar basal-body rod protein FlgG [Selenomonas noxia ATCC
           43541]
          Length = 275

 Score = 56.1 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E  +M  + R Y +N + I  S  M+     L R
Sbjct: 229 QGTLEMSNVQIVEEMVNMIVSQRAYESNSKAITTSDSMLEIANTLKR 275



 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 7/43 (16%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          +    +IA SG+  ++    +I+ N+ANA TTG       Y+R
Sbjct: 1  MWRGLYIAASGMITETKHTDMIANNLANAATTG-------YKR 36


>gi|237750021|ref|ZP_04580501.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879]
 gi|229374432|gb|EEO24823.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879]
          Length = 262

 Score = 56.1 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV ++ E  D+    R Y AN ++I+ +  M+ T   L R
Sbjct: 216 AGFLELSNVRLVSEMTDLITGQRAYEANSKSIQTADSMLQTVNGLKR 262



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 21/98 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S + A +G+  Q  ++   S NIAN  T G       ++R+   F ++ + +    G
Sbjct: 1  MMRSLYTATTGMLGQQLQIDTTSNNIANVNTVG-------FKRQRAEFNDLFYQTLQFAG 53

Query: 61 VRVK-----------KIGVDQSTFVEEFDPGHPVANAS 87
           +              +GV        +  G P    +
Sbjct: 54 TQTSETTLTPTGIEVGVGVRTGAINRIYSQGSPKETEN 91


>gi|212637787|ref|YP_002314312.1| flagellar basal body rod protein [Shewanella piezotolerans WP3]
 gi|212559271|gb|ACJ31725.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3]
          Length = 261

 Score = 56.1 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  ++ +  DQ+                G ++  NVNV+ E  +M  T R Y  N +
Sbjct: 196 GASGAAIEGVAGDQALGQIR----------QGALEGANVNVVEEMVEMISTQRAYEMNAK 245

Query: 117 TIKQSHDMM 125
            +  S DM+
Sbjct: 246 VVSASDDML 254



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       ++R  ++F ++        G
Sbjct: 1  MQSALWVSKTGLTAQDTKMTTIANNLANVNTTG-------FKRDRVAFNDLFYQVQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V +     S    
Sbjct: 54 GQVDEQNELPSGLQL 68


>gi|254780378|ref|YP_003064791.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040055|gb|ACT56851.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 262

 Score = 56.1 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV+ + E ++M    R Y  N + I+ + +M +
Sbjct: 216 KQGYLEASNVDAVKEISEMISAQRAYEMNSKVIEAADEMSS 256


>gi|119953549|ref|YP_945759.1| flagellar basal body rod protein FlgG [Borrelia turicatae 91E135]
 gi|119862320|gb|AAX18088.1| flagellar basal-body rod protein FlgG [Borrelia turicatae 91E135]
          Length = 264

 Score = 56.1 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 218 QGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMKAQQYNVDTIANNLSNVNTTG 33


>gi|312136039|ref|YP_004003377.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor
           owensensis OL]
 gi|311776090|gb|ADQ05577.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           owensensis OL]
          Length = 267

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E   +    R Y  N + I+ + DM++   +L R
Sbjct: 221 QGFLEMSNVQVVDEMVKLIIAQRAYEINSKAIQTADDMLSIANNLKR 267



 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + + A  G+  Q   + IIS N+AN  TT 
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTA 33


>gi|319781681|ref|YP_004141157.1| flagellar basal-body rod protein FlgG [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167569|gb|ADV11107.1| flagellar basal-body rod protein FlgG [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 262

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 79  PGHP--VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           PG P       G ++  NV+ + E  ++    R Y  N + I+ + DM +
Sbjct: 206 PGDPGFATIQQGYLEASNVDPVKEITELISAQRAYEMNSKVIQAADDMAS 255



 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 10/60 (16%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGV 61
          + +  IA +G+  Q   +++I+ NIAN  TTG       Y+R    F +++     + GV
Sbjct: 1  MKALAIAATGMNAQQTNLEVIANNIANINTTG-------YKRARAEFSDLLYQVDRTQGV 53


>gi|315121847|ref|YP_004062336.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495249|gb|ADR51848.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 262

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV+ + E ++M    R Y  N + I+ + +M +
Sbjct: 216 KQGYLEASNVDAVKEISEMISAQRAYEMNSKVIQAADEMSS 256


>gi|149908757|ref|ZP_01897418.1| putative flagellar basal-body rod protein [Moritella sp. PE36]
 gi|149808299|gb|EDM68238.1| putative flagellar basal-body rod protein [Moritella sp. PE36]
          Length = 261

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV+V+ E  DM  T R Y  N + +  +  M+ 
Sbjct: 220 EGSNVSVVEEMVDMISTQRAYEMNAKVVSAADKMLQ 255



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + ++   + +GLA Q  +M II+ N+AN  TTG       +++  ++F ++ +
Sbjct: 1  MSSALWTSKTGLAAQDVKMSIIANNLANVNTTG-------FKKDRVAFSDLFY 46


>gi|312792656|ref|YP_004025579.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179796|gb|ADQ39966.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 494

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E  DM  T R Y AN + I  S +++   +++ R
Sbjct: 448 QGTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDLVNIKR 494



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 11/55 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M  + +S     S L     RM +I +NIAN  T G       ++   ++F  V 
Sbjct: 2  MRSMFSSI----SALRAHQTRMDVIGDNIANVNTVG-------FKSSRVTFASVF 45


>gi|225158947|ref|ZP_03725259.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2]
 gi|224802442|gb|EEG20702.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2]
          Length = 261

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NV+ L E  D+   +R Y AN + I+   D +  TL+ L
Sbjct: 214 QGYIESSNVSQLREMVDLITISRAYEANQKMIQSRDDTIGKTLEAL 259


>gi|170748107|ref|YP_001754367.1| flagellar basal body rod protein FlgG [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654629|gb|ACB23684.1| flagellar basal-body rod protein FlgG [Methylobacterium
           radiotolerans JCM 2831]
          Length = 262

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+ + E  ++    R +  N + I+ + +M 
Sbjct: 215 QQGYLETSNVDPVREITNLISAQRAFEMNSKVIQAADEMA 254



 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 10/64 (15%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
          + +  IA +G+  Q   +++I+ NI+N  TT        ++     F+++++ +    GV
Sbjct: 1  MRALAIAATGMNAQQLNVEVIANNISNLNTTA-------FKAARAEFKDLIYQAERPAGV 53

Query: 62 RVKK 65
           ++ 
Sbjct: 54 PIQA 57


>gi|13472576|ref|NP_104143.1| flagellar basal body rod protein FlgG [Mesorhizobium loti
           MAFF303099]
 gi|14023322|dbj|BAB49929.1| flagellar basal body distal rod protein; FlgG [Mesorhizobium loti
           MAFF303099]
          Length = 262

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 79  PGHP--VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           PG P       G ++  NV+ + E  ++    R Y  N + I+ + DM +
Sbjct: 206 PGDPGFATIQQGYLEASNVDPVKEITELISAQRAYEMNSKVIQAADDMAS 255



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 10/60 (16%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGV 61
          + +  IA +G+  Q   +++I+ NIAN  TTG       Y+R    F +++     + GV
Sbjct: 1  MKALAIAATGMNAQQTNLEVIANNIANINTTG-------YKRARAEFSDLLYQVDRTQGV 53


>gi|332187904|ref|ZP_08389637.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. S17]
 gi|332012065|gb|EGI54137.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. S17]
          Length = 262

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 24/40 (60%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G+++  NVNV+ E  DM ET R Y  N + IK + +M+ 
Sbjct: 217 QGMLEGSNVNVVEELVDMIETQRAYEVNSKMIKSTDEMLQ 256



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A+ HIA +GL  Q  RM++IS N+AN  TTG       ++R   +FE + + +
Sbjct: 4  AAMHIARTGLDAQDMRMRVISNNLANVNTTG-------FKRDRAAFETLAYQT 49


>gi|224531677|ref|ZP_03672309.1| flagellar basal-body rod protein FlgG [Borrelia valaisiana VS116]
 gi|224511142|gb|EEF81548.1| flagellar basal-body rod protein FlgG [Borrelia valaisiana VS116]
          Length = 265

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 217 KQGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|157959900|ref|YP_001499934.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC
           700345]
 gi|157844900|gb|ABV85399.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC
           700345]
          Length = 261

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  ++ I  D++                G ++  NVNV+ E  +M  T R Y  N +
Sbjct: 196 GASGAAIEGIAGDEALGQVR----------QGALEGANVNVVEEMVEMISTQRAYEMNAK 245

Query: 117 TIKQSHDMM 125
            +  S DM+
Sbjct: 246 VVSASDDML 254



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 11/61 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMHGSG 59
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       ++R  ++F     +V    G
Sbjct: 1  MQSALWVSKTGLTAQDTKMTTIANNLANVNTTG-------FKRDRVAFNDLFYQVQRQPG 53

Query: 60 G 60
          G
Sbjct: 54 G 54


>gi|206890777|ref|YP_002249848.1| flagellar basal-body rod protein FlgG [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742715|gb|ACI21772.1| flagellar basal-body rod protein FlgG [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 262

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN++ E A+M    R +  N + ++ S +M+ T   L R
Sbjct: 216 QGFLEMSNVNIVEELANMIIAQRAFDINSKAVQTSDEMLQTVAALKR 262



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S   A++G+  Q   + +IS N+AN  TTG
Sbjct: 1  MLRSLFTASTGMYAQQLNLDVISHNLANVNTTG 33


>gi|312115249|ref|YP_004012845.1| flagellar basal-body rod protein FlgG [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311220378|gb|ADP71746.1| flagellar basal-body rod protein FlgG [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 261

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 18/38 (47%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            V+  NV+ + E  ++    R Y  N + I+ + +M  
Sbjct: 217 YVESSNVDPVQEITNLISAQRNYEMNSKVIQAADEMFQ 254



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  +A +G+  Q   +++I+ NIANA T         ++R    F ++++ S
Sbjct: 1  MRALSVAATGMVAQQTNVEVIANNIANANTVA-------FKRSRAEFADLLYQS 47


>gi|260466619|ref|ZP_05812807.1| flagellar basal-body rod protein FlgG [Mesorhizobium opportunistum
           WSM2075]
 gi|259029625|gb|EEW30913.1| flagellar basal-body rod protein FlgG [Mesorhizobium opportunistum
           WSM2075]
          Length = 262

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 79  PGHP--VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           PG P       G ++  NV+ + E  ++    R Y  N + I+ + DM +
Sbjct: 206 PGDPGFATIQQGYLEASNVDPVKEITELISAQRAYEMNSKVIQAADDMAS 255



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 10/60 (16%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGV 61
          + +  IA +G+  Q   +++I+ NIAN  TTG       Y+R    F +++     + GV
Sbjct: 1  MKALAIAATGMNAQQTNLEVIANNIANINTTG-------YKRARAEFSDLLYQVDRTQGV 53


>gi|332981440|ref|YP_004462881.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
 gi|332699118|gb|AEE96059.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
          Length = 265

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 82  PVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P  + +G +     +  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 209 PGQDGTGYLTPGALEMSNVDLSRELTDMIITQRGFQANSRVITTSDEMLQELVNLKR 265



 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  + +      SGL     RM +I  NIAN  T G       ++   ++F++V + +
Sbjct: 2  MRSMFSGV----SGLRAHQTRMDVIGNNIANVNTVG-------FKSSRVTFQDVFNQT 48


>gi|332284021|ref|YP_004415932.1| flagellar basal body rod protein FlgG [Pusillimonas sp. T7-7]
 gi|330427974|gb|AEC19308.1| flagellar basal body rod protein FlgG [Pusillimonas sp. T7-7]
          Length = 261

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +  NVNV  E  +M  T R Y  N + I+ S  M+     L
Sbjct: 219 YTETSNVNVAEELVNMITTQRAYEMNSKAIETSDQMLARLTQL 261



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 10/74 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          +I S  IA +GL  Q   M +IS N+AN  TTG       ++R   +FE++M+ +    G
Sbjct: 1  MIRSLWIAKTGLESQQTNMDVISNNLANVNTTG-------FKRSRANFEDLMYQTIRQPG 53

Query: 61 VRVKKIGVDQSTFV 74
           +V       S   
Sbjct: 54 AQVGAANQLPSGLQ 67


>gi|312880335|ref|ZP_07740135.1| flagellar basal-body rod protein FlgG [Aminomonas paucivorans DSM
           12260]
 gi|310783626|gb|EFQ24024.1| flagellar basal-body rod protein FlgG [Aminomonas paucivorans DSM
           12260]
          Length = 262

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV V+ E  +M    R Y AN +TI  + +++    +L R
Sbjct: 220 EMANVQVVEEMVNMIVAQRAYEANSKTISTADELLRIANNLRR 262



 Score = 42.6 bits (100), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +I S     +G+  Q   + ++S N+AN  T+G       Y++    F+++M+ 
Sbjct: 1  MIRSLWSGATGMIAQQTNLDVVSNNLANVNTSG-------YKKVRADFQDLMYQ 47


>gi|302338085|ref|YP_003803291.1| fagellar hook-basal body protein [Spirochaeta smaragdinae DSM
           11293]
 gi|301635270|gb|ADK80697.1| fagellar hook-basal body protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 460

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  +  DM  T R + AN +TI  S  M+   L L R
Sbjct: 414 AGALEMSNVDLAEQFTDMIVTQRGFQANSRTITTSDQMLQELLTLKR 460



 Score = 37.2 bits (86), Expect = 0.81,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          SGL     RM +I  NI+N  T G       +++  ++F++++  +
Sbjct: 9  SGLQNHQTRMDVIGNNISNVNTVG-------FKKGRVNFQDLLSQT 47


>gi|89072313|ref|ZP_01158892.1| putative flagellar basal-body rod protein [Photobacterium sp.
           SKA34]
 gi|89051845|gb|EAR57297.1| putative flagellar basal-body rod protein [Photobacterium sp.
           SKA34]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V ++    S    
Sbjct: 54 AQVDQLNQLPSGVQL 68


>gi|54307272|ref|YP_128292.1| putative FlgG flagellar basal-body rod protein [Photobacterium
           profundum SS9]
 gi|46911692|emb|CAG18490.1| Putative FlgG flagellar basal-body rod protein [Photobacterium
           profundum SS9]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  NVNV+ E  +M  T R Y  N + +  +  M+
Sbjct: 220 EGSNVNVVEEMVNMITTQRAYEMNAKVVSSADQML 254



 Score = 43.0 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + A+  I+ +GLA Q  +MQ+IS N+AN  T G       +++    FE++ + 
Sbjct: 1  MHAALWISKTGLAAQDTQMQVISNNLANVNTVG-------FKQDRAVFEDLFYQ 47


>gi|90577346|ref|ZP_01233157.1| putative flagellar basal-body rod protein [Vibrio angustum S14]
 gi|90440432|gb|EAS65612.1| putative flagellar basal-body rod protein [Vibrio angustum S14]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V ++    S    
Sbjct: 54 AQVDQLNQLPSGVQL 68


>gi|220905353|ref|YP_002480665.1| hypothetical protein Ddes_2091 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869652|gb|ACL49987.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 499

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV+V  E A+M  T R + +N + +  +  M+   ++L R
Sbjct: 459 SNVDVATEMANMIITQRGFQSNSKVVTTADQMLQKAVELKR 499



 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          + +S +I  +G+   +  M + + N+AN  T G       Y+++ I F ++ +   G
Sbjct: 1  MNSSLYIGATGMKGLAEGMNVTTNNLANVSTIG-------YKQQGILFSDIFYAEQG 50


>gi|330447905|ref|ZP_08311553.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492096|dbj|GAA06050.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V ++    S    
Sbjct: 54 AQVDQLNQLPSGVQL 68


>gi|218662054|ref|ZP_03517984.1| hypothetical protein RetlI_22525 [Rhizobium etli IE4771]
          Length = 88

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 41/120 (34%), Gaps = 32/120 (26%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +  Q+ R+  I+ NIAN      TP    Y R   S   V   SGGV+            
Sbjct: 1   MRAQTTRIGAIANNIAN----SSTPD---YARLNTSLTAVT--SGGVKAVV--------- 42

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
                  P A         +V+   E  D+ E    Y AN    +   D+    + + RD
Sbjct: 43  ------SPTA--------SDVDPATELTDLLEAELAYKANAVVFETGADLWEMLMSITRD 88


>gi|149189838|ref|ZP_01868118.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
 gi|148836324|gb|EDL53281.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 10/66 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPG 53

Query: 61 VRVKKI 66
           +V ++
Sbjct: 54 AQVDQV 59


>gi|15964432|ref|NP_384785.1| flagellar hook protein FlgE [Sinorhizobium meliloti 1021]
 gi|307311574|ref|ZP_07591215.1| fagellar hook-basal body protein [Sinorhizobium meliloti BL225C]
 gi|20141447|sp|Q9X5Y0|FLGE_RHIME RecName: Full=Flagellar hook protein flgE
 gi|15073609|emb|CAC45251.1| Flagellar hook protein [Sinorhizobium meliloti 1021]
 gi|306899591|gb|EFN30220.1| fagellar hook-basal body protein [Sinorhizobium meliloti BL225C]
          Length = 406

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 14/67 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          L  +     SG+  QS R+  ++ENIANA TTG       Y+R +  F  ++       +
Sbjct: 3  LYGTMRTGVSGMNAQSNRLSTVAENIANANTTG-------YKRASTEFSSMILPSGNGSY 55

Query: 57 GSGGVRV 63
           SGGV+ 
Sbjct: 56 NSGGVQT 62



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E   M E+ R Y AN +  +   +++   ++L R
Sbjct: 360 SGALESSNVDIAEELTAMIESQRNYTANSKVFQTGSELLEVLVNLKR 406


>gi|254458078|ref|ZP_05071505.1| flagellar basal-body rod protein FlgG [Campylobacterales bacterium
           GD 1]
 gi|207085471|gb|EDZ62756.1| flagellar basal-body rod protein FlgG [Campylobacterales bacterium
           GD 1]
          Length = 262

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NV ++VE  D+    R Y +N + I  S +M+ TT +L R
Sbjct: 216 QGFVELSNVELVVELTDLITGQRAYDSNSKVITTSDEMLQTTNNLKR 262



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 10/71 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S + A++G+     ++   + NIAN  T G       +++    F ++M+      G
Sbjct: 1  MMQSLYTASTGMLGMQTQIDTTANNIANVNTIG-------FKKSRAEFSDLMYKVMSYAG 53

Query: 61 VRVKKIGVDQS 71
               +    +
Sbjct: 54 TATSDVTKSPT 64


>gi|326792665|ref|YP_004310486.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
           5427]
 gi|326543429|gb|ADZ85288.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
           5427]
          Length = 271

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV +  E  ++    R Y  N   IK + DM+     L
Sbjct: 225 TGYLEGSNVQIAQEMVNLIIAQRAYEINSTAIKAADDMLGQANQL 269



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +I + + A SG+  Q   +  IS N+AN  T         Y+++T +F+ +++ + G
Sbjct: 1  MIRALYTAASGMTAQQLNVDTISNNMANVNTAA-------YKKETTNFKSLLYTTMG 50


>gi|187918627|ref|YP_001884192.1| flagellar basal body rod protein FlgG [Borrelia hermsii DAH]
 gi|119861475|gb|AAX17270.1| flagellar basal-body rod protein FlgG [Borrelia hermsii DAH]
          Length = 265

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 218 QGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMKAQQYNVDTIANNLSNVNTTG 33


>gi|288940409|ref|YP_003442649.1| fagellar hook-basal body protein [Allochromatium vinosum DSM 180]
 gi|288895781|gb|ADC61617.1| fagellar hook-basal body protein [Allochromatium vinosum DSM 180]
          Length = 436

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN +TI  S  M  T L++
Sbjct: 397 SNVDLSQELVNMITAQRNYEANAKTISTSDQMTQTILNI 435


>gi|160878401|ref|YP_001557369.1| flagellar basal body rod protein [Clostridium phytofermentans ISDg]
 gi|160427067|gb|ABX40630.1| flagellar basal body rod protein [Clostridium phytofermentans ISDg]
          Length = 257

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 19/83 (22%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           E +     G RVK    D +  +             G  +  NVNV+ E  +M    R Y
Sbjct: 189 ESMYEAVDGARVK----DTAAGIR-----------QGYTEQSNVNVVSEMVNMIAITRAY 233

Query: 112 MANLQTIKQSHDMMTTTLDLLRD 134
            AN + ++        TL+L  +
Sbjct: 234 EANQKVLQSIDG----TLELAAN 252



 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          +G+  +  R+ IIS N+AN+ T G
Sbjct: 10 TGMENEQKRLDIISNNLANSATVG 33


>gi|312621577|ref|YP_004023190.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202044|gb|ADQ45371.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 488

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV++  E  DM  T R Y AN + I  S +++   +++ R
Sbjct: 441 SQGTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDLVNIKR 488



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 11/55 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M  + +S     S L     RM +I +NIAN  T G       ++   ++F  V 
Sbjct: 2  MRSMFSSI----SALRAHQTRMDVIGDNIANVNTVG-------FKSSRVTFASVF 45


>gi|302872562|ref|YP_003841198.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575421|gb|ADL43212.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 489

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV++  E  DM  T R Y AN + I  S +++   +++ R
Sbjct: 442 SQGTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDLVNIKR 489



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 11/55 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M  + +S     S L     RM +I +NIAN  T G       ++   ++F  V 
Sbjct: 2  MRSMFSSI----SALRAHQTRMDVIGDNIANVNTVG-------FKSSRVTFASVF 45


>gi|209963565|ref|YP_002296480.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum SW]
 gi|209957031|gb|ACI97667.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum SW]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVN++ E   +    R Y  N + ++    M+ T   +
Sbjct: 216 QGYVEAANVNIVQEITSLISAQRAYEMNSRVVEAGDQMLNTVTQM 260



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 8/72 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + + +IA +G+  Q   +++IS NIAN  T G       ++R    F+++M+ +  VR  
Sbjct: 1  MRTLNIAATGMMAQQLNVEVISNNIANLNTVG-------FKRSRAEFQDLMYQAQ-VRPG 52

Query: 65 KIGVDQSTFVEE 76
              DQ T V  
Sbjct: 53 SESSDQDTIVPA 64


>gi|218249434|ref|YP_002375273.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi ZS7]
 gi|218164622|gb|ACK74683.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi ZS7]
          Length = 265

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 218 QGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|262396033|ref|YP_003287886.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|262339627|gb|ACY53421.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
          Length = 243

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 197 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 236



 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 10/57 (17%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGVRVKKIGVDQSTFVE 75
          M  IS N+AN  T G       ++R  + FE++        G +V ++    S    
Sbjct: 1  MTAISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPGAQVDQVNEVPSGIQL 50


>gi|150395503|ref|YP_001325970.1| flagellar hook protein FlgE [Sinorhizobium medicae WSM419]
 gi|150027018|gb|ABR59135.1| flagellar basal body FlaE domain protein [Sinorhizobium medicae
          WSM419]
          Length = 402

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 14/67 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L  +     SG+  QS R+  ++ENIANA TTG       Y+R +  F  +        +
Sbjct: 3  LYGTMRTGVSGMNAQSNRLSTVAENIANANTTG-------YKRASTEFSSMILPSGNGAY 55

Query: 57 GSGGVRV 63
           SGGV+ 
Sbjct: 56 NSGGVQT 62



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E   M E+ R Y AN +  +   +++   ++L R
Sbjct: 356 SGALESSNVDIAEELTAMIESQRNYTANSKVFQTGSELLEVLVNLKR 402


>gi|42522134|ref|NP_967514.1| flagellar basal-body rod protein FlgG [Bdellovibrio bacteriovorus
           HD100]
 gi|39574665|emb|CAE78507.1| flagellar basal-body rod protein FlgG [Bdellovibrio bacteriovorus
           HD100]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           A G ++  NVN++ E  +M    R    N + ++ S  M+  
Sbjct: 215 AQGQLESSNVNIVDEMVNMITAQRAMETNSKVMQASDQMLQA 256



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++ S + A +G+A Q   M +I+ NIAN  T G       ++R    FE++M+ + 
Sbjct: 1  MLKSLNTAATGMAAQQTNMDVIANNIANVSTAG-------FKRSRAEFEDLMYQTQ 49


>gi|260779345|ref|ZP_05888237.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605509|gb|EEX31804.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGSLEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
            V ++    +    
Sbjct: 54 ALVDQVNELPAGVQL 68


>gi|283850806|ref|ZP_06368092.1| flagellar basal-body rod protein FlgF [Desulfovibrio sp. FW1012B]
 gi|283573729|gb|EFC21703.1| flagellar basal-body rod protein FlgF [Desulfovibrio sp. FW1012B]
          Length = 260

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A G ++ PNV V+ E   M ET R + A  + +  S+++ T  + + 
Sbjct: 211 AQGYLEKPNVEVVEEMVTMIETQRTFEAYQKVMTNSNELDTKAIRMG 257



 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 8/43 (18%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           L+ ++ R+ + + N+AN  TTG       Y+R  ++FE+   
Sbjct: 12 ALSTET-RLNLSANNLANINTTG-------YKRDRVAFEDTFK 46


>gi|153831580|ref|ZP_01984247.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
 gi|156976143|ref|YP_001447049.1| flagellar basal body rod protein [Vibrio harveyi ATCC BAA-1116]
 gi|269960118|ref|ZP_06174494.1| Putative flagellar basal-body rod protein flgG [Vibrio harveyi
           1DA3]
 gi|148872090|gb|EDL70907.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
 gi|156527737|gb|ABU72822.1| hypothetical protein VIBHAR_04914 [Vibrio harveyi ATCC BAA-1116]
 gi|269835089|gb|EEZ89172.1| Putative flagellar basal-body rod protein flgG [Vibrio harveyi
           1DA3]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V ++    S    
Sbjct: 54 AQVDQVNELPSGVQL 68


>gi|254227985|ref|ZP_04921415.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|151939481|gb|EDN58309.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V ++    S    
Sbjct: 54 AQVDQVNEVPSGIQL 68


>gi|329849714|ref|ZP_08264560.1| flagellar basal-body rod protein FlgG [Asticcacaulis biprosthecum
           C19]
 gi|328841625|gb|EGF91195.1| flagellar basal-body rod protein FlgG [Asticcacaulis biprosthecum
           C19]
          Length = 263

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 19/47 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G  +  NV+ + E   +    R Y  N + I  +  M+ T   + R
Sbjct: 216 QGYTEASNVDAVGEITALIVAQRAYEMNSKVITTADQMLQTASQIAR 262



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +   A +G+A Q   +++IS NIAN  T G       ++++   F+++++ +
Sbjct: 1  MRALRTATTGMAAQQLNVEVISNNIANMNTVG-------FKKQRAEFQDLLYQN 47


>gi|118588711|ref|ZP_01546119.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
 gi|118438697|gb|EAV45330.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
          Length = 260

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 24/43 (55%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV+ + E AD+    R Y  N Q I+ + +M +TT +L
Sbjct: 217 FLEMANVDAVTEIADLISAQRAYEMNSQIIQAADEMYSTTTNL 259



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 33/54 (61%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + + HIA +G+  Q   +++IS N+AN RTTG       ++++   F+++++ +
Sbjct: 1  MKALHIAATGMKAQELNVEVISNNVANMRTTG-------FKKQRADFQDLLYQN 47


>gi|297516833|ref|ZP_06935219.1| flagellar basal body rod protein FlgC [Escherichia coli OP50]
          Length = 37

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGD 37
          L+    IA S L  QS R+ + + N+ANA +   
Sbjct: 3  LLNIFDIAGSALTAQSQRLNVAASNLANADSVTG 36


>gi|291334316|gb|ADD93977.1| flagellar basal body rod protein FlgG [uncultured marine bacterium
           MedDCM-OCT-S09-C247]
          Length = 257

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G V+  NVNV+ +  DM ET R Y  + ++I    +MM 
Sbjct: 212 QGYVESSNVNVVQQLVDMIETQRAYEVSSKSITAVDEMMQ 251



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 10/69 (14%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVK 64
           H+A +GL  Q  +MQ+I+ N+AN  TTG       ++R   +FE + +    + G +  
Sbjct: 1  MHVAKTGLNAQQYKMQVIANNLANVNTTG-------FKRDRANFESLFYQIVKTAGAQTA 53

Query: 65 KIGVDQSTF 73
                S  
Sbjct: 54 DDTALTSPL 62


>gi|218674739|ref|ZP_03524408.1| flagellar hook protein FlgE [Rhizobium etli GR56]
          Length = 433

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 16/78 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          +  S   A SG+  Q+ R+  +++NIAN  T+G       Y+  + SF  ++       +
Sbjct: 3  IFGSMKTAVSGMNAQANRLSTVADNIANVNTSG-------YKAVSTSFSSLVLPSSGGNY 55

Query: 57 GSGGVR--VKKIGVDQST 72
           SGGV+  V++   DQ  
Sbjct: 56 NSGGVQTSVRQAVSDQGD 73



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E+ R Y AN +  +   D+M   ++L R
Sbjct: 386 KSGALEGSNVDLAGELTEMIESQRSYTANSKVFQTGSDIMDVLVNLKR 433


>gi|15595119|ref|NP_212908.1| flagellar basal body rod protein FlgG [Borrelia burgdorferi B31]
 gi|195941595|ref|ZP_03086977.1| flagellar basal body rod protein FlgG [Borrelia burgdorferi 80a]
 gi|216264940|ref|ZP_03436932.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 156a]
 gi|221217835|ref|ZP_03589302.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 72a]
 gi|223889350|ref|ZP_03623936.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 64b]
 gi|224532949|ref|ZP_03673558.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi
           WI91-23]
 gi|224533277|ref|ZP_03673871.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi
           CA-11.2a]
 gi|225548956|ref|ZP_03769933.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 94a]
 gi|225549893|ref|ZP_03770854.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 118a]
 gi|226320636|ref|ZP_03796195.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 29805]
 gi|226321474|ref|ZP_03797001.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi Bol26]
 gi|3913655|sp|O51715|FLGG_BORBU RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|2688724|gb|AAC67132.1| flagellar basal-body rod protein (flgG) [Borrelia burgdorferi B31]
 gi|215981413|gb|EEC22220.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 156a]
 gi|221192141|gb|EEE18361.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 72a]
 gi|223885036|gb|EEF56140.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 64b]
 gi|224512113|gb|EEF82505.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi
           WI91-23]
 gi|224513442|gb|EEF83799.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi
           CA-11.2a]
 gi|225369352|gb|EEG98804.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 118a]
 gi|225370559|gb|EEG99995.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 94a]
 gi|226233270|gb|EEH32022.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi Bol26]
 gi|226233959|gb|EEH32681.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 29805]
 gi|312149206|gb|ADQ29277.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi N40]
          Length = 265

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 218 QGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|222530130|ref|YP_002574012.1| hypothetical protein Athe_2164 [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456977|gb|ACM61239.1| protein of unknown function DUF1078 domain protein
           [Caldicellulosiruptor bescii DSM 6725]
          Length = 488

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV++  E  DM  T R Y AN + I  S +++   +++ R
Sbjct: 441 SQGTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDLVNIKR 488



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 11/55 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M  + +S     S L     RM +I +NIAN  T G       ++   ++F  V 
Sbjct: 2  MRSMFSSI----SALRAHQTRMDVIGDNIANVNTVG-------FKSSRVTFASVF 45


>gi|241589578|ref|YP_002979603.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
 gi|240868290|gb|ACS65949.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV+ E   + +T R Y  N + ++ +  M+     L
Sbjct: 218 YVETSNVNVVEEMIQLIQTQRAYEINSKAVQTADRMLEKIAQL 260



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          +I S  I+ +G+  Q  ++ ++S N+AN  TTG       ++R    FE++++ + 
Sbjct: 1  MIRSLWISKTGMEAQQTQLDVVSNNLANVNTTG-------FKRSRAVFEDLLYQNA 49


>gi|331005440|ref|ZP_08328819.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC1989]
 gi|330420716|gb|EGG95003.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC1989]
          Length = 258

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NVN++ E   +    R Y  N + ++ + DM++
Sbjct: 211 QQGFIESSNVNLVEELTSLMSAQRGYELNARVVQAADDMLS 251



 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 34/68 (50%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + +I+ +GL  Q  +++ I+ N++N  T G       Y++  + F++++    G+  
Sbjct: 1  MLDAFNISATGLQSQQTQVETIANNLSNVNTDG-------YKKSKVIFQDIVSKQLGINT 53

Query: 64 KKIGVDQS 71
            +    S
Sbjct: 54 NGLINQAS 61


>gi|328948267|ref|YP_004365604.1| flagellar basal-body rod protein FlgG [Treponema succinifaciens DSM
           2489]
 gi|328448591|gb|AEB14307.1| flagellar basal-body rod protein FlgG [Treponema succinifaciens DSM
           2489]
          Length = 264

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+V+ E   M    R Y  N + I+ S +M+ T   L R
Sbjct: 220 FLEMSNVSVVNEMVQMIVAQRAYEFNSKAIQTSDNMLQTAAGLKR 264



 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 11 ANSGLAVQSARMQIISENIANARTTG 36
          A +G+  Q   +  IS N++N  TTG
Sbjct: 8  AATGMNGQQMNIDTISNNLSNVNTTG 33


>gi|323492336|ref|ZP_08097489.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
           20546]
 gi|323313383|gb|EGA66494.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
           20546]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V ++    S    
Sbjct: 54 AQVDQVNELPSGVQL 68


>gi|312148533|gb|ADQ31192.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi JD1]
          Length = 265

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 218 QGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|312126828|ref|YP_003991702.1| fagellar hook-basal body protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776847|gb|ADQ06333.1| fagellar hook-basal body protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 486

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV++  E  DM  T R Y AN + I  S +++   +++ R
Sbjct: 439 SQGTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDLVNIKR 486



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 11/55 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M  + +S     S L     RM +I +NIAN  T G       ++   ++F  V 
Sbjct: 2  MRSMFSSI----SALRAHQTRMDVIGDNIANVNTVG-------FKSSRVTFASVF 45


>gi|216263448|ref|ZP_03435443.1| flagellar basal-body rod protein FlgG [Borrelia afzelii ACA-1]
 gi|215980292|gb|EEC21113.1| flagellar basal-body rod protein FlgG [Borrelia afzelii ACA-1]
          Length = 265

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 218 QGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|258514026|ref|YP_003190248.1| hypothetical protein Dtox_0711 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777731|gb|ACV61625.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 262

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G  +  NV+++ E   + E  R Y  N ++IK + DM    
Sbjct: 215 QGFTEMSNVDLIQEMVRLIEAQRAYEINARSIKTADDMWGMA 256



 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 21/91 (23%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANART-------TGDTP-------GSDPYRRKTI 49
          +I +  I  S L      +   + NIAN  T       T  T            Y   T+
Sbjct: 1  MIKTLGIGASALNANQTYIDSAANNIANVNTDEYKAERTRFTDLLYNYYYRGTTYPAPTV 60

Query: 50 SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
            +       GVR+ ++        + F+PG
Sbjct: 61 DEKATESSGNGVRIGEV-------KKVFEPG 84


>gi|329898287|ref|ZP_08272370.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC3088]
 gi|328920852|gb|EGG28295.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC3088]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ E  +M ET R Y  N + I  +  M+ 
Sbjct: 216 QGSLEASNVNVVEEMVNMIETQRAYEVNSKAISAADGMLR 255



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 10/58 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          MD   AS  +A +GL  Q  RM +I+ N+AN  T G       +++    FE++++ +
Sbjct: 1  MD---ASLWVAKTGLTAQQMRMTVIANNLANVNTVG-------FKKDRAVFEDLLYQN 48


>gi|327192294|gb|EGE59259.1| flagellar hook protein FlgE [Rhizobium etli CNPAF512]
          Length = 483

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 30/61 (49%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  S   A SG++ Q+ R+  +S+NIANA T G    S  +    +      + SGGV+ 
Sbjct: 56  IFGSMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSGNYNSGGVQT 115

Query: 64  K 64
            
Sbjct: 116 S 116



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 436 QSGALESSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 483


>gi|153837069|ref|ZP_01989736.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ3810]
 gi|149749657|gb|EDM60402.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ3810]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M +IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTVISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V ++    S    
Sbjct: 54 AQVDQVNELPSGVQL 68


>gi|182412222|ref|YP_001817288.1| hypothetical protein Oter_0398 [Opitutus terrae PB90-1]
 gi|177839436|gb|ACB73688.1| protein of unknown function DUF1078 [Opitutus terrae PB90-1]
          Length = 249

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NV  L E  D+   +R Y AN + I      M   LD+L
Sbjct: 203 QGYLENSNVTPLREMVDLVIISRAYEANQRMITTLDQQMQKALDML 248


>gi|157147100|ref|YP_001454419.1| flagellar basal body rod protein FlgG [Citrobacter koseri ATCC
           BAA-895]
 gi|157084305|gb|ABV13983.1| hypothetical protein CKO_02877 [Citrobacter koseri ATCC BAA-895]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM    R Y  N + +  + DM+
Sbjct: 215 EQGSLEGSNVQVVEEMVDMITVQRAYEMNAKMVSAADDML 254



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 10/59 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M+    +  I+ +GLA Q A+M  IS N+AN  TTG       ++R    F ++ + + 
Sbjct: 1  MNP---ALWISKTGLAAQDAKMTAISNNLANVNTTG-------FKRDRAMFADLFYQNQ 49


>gi|94500243|ref|ZP_01306776.1| flagellar basal-body rod protein FlgG [Oceanobacter sp. RED65]
 gi|94427542|gb|EAT12519.1| flagellar basal-body rod protein FlgG [Oceanobacter sp. RED65]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV V+ E   M    R Y  N + +  +  M+ 
Sbjct: 215 EQGFLENSNVKVVEEMVKMITVQRAYEMNSKVVSSADQMLQ 255



 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + ++  ++ +GL  Q   +  IS N+AN  TTG       +++    FE++++ 
Sbjct: 1  MHSALWVSKTGLNAQDHGLTTISNNLANVSTTG-------FKKDRAVFEDLIYQ 47


>gi|146278639|ref|YP_001168798.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides
          ATCC 17025]
 gi|145556880|gb|ABP71493.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          ATCC 17025]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTP 39
          + +  IA +G++ Q  R+ +IS N+AN  TTG  P
Sbjct: 1  MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNP 35



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  ++ +  R Y  N + I  +  M+  T
Sbjct: 216 QGYLEESSVDSVQEITELIKAQRGYELNAKVITAADQMLAAT 257


>gi|328958276|ref|YP_004375662.1| flagellar basal body rod protein FlgG [Carnobacterium sp. 17-4]
 gi|328674600|gb|AEB30646.1| flagellar basal body rod protein FlgG [Carnobacterium sp. 17-4]
          Length = 289

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M  T+R Y AN ++I  S  M+   ++L R
Sbjct: 243 SGFLEMSNVDLANEFTEMIVTSRSYQANSRSITTSDTMLEELINLKR 289



 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 21/77 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
          ++ S +   +G+     +M +IS NIAN  TT    G        + FE+++  +     
Sbjct: 1  MLKSLYSGVTGMKNIQTKMDVISNNIANVNTTAFKTG-------RVRFEDMLSQTNASAQ 53

Query: 60 ----------GVRVKKI 66
                    GV+V  I
Sbjct: 54 AGINAQQVGLGVQVGSI 70


>gi|111115606|ref|YP_710224.1| flagellar basal body rod protein FlgG [Borrelia afzelii PKo]
 gi|110890880|gb|ABH02048.1| flagellar basal-body rod protein [Borrelia afzelii PKo]
          Length = 265

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 218 QGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|28900124|ref|NP_799779.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|260365774|ref|ZP_05778270.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           K5030]
 gi|260880696|ref|ZP_05893051.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AN-5034]
 gi|260897698|ref|ZP_05906194.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           Peru-466]
 gi|260899391|ref|ZP_05907786.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ4037]
 gi|28808407|dbj|BAC61612.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308086222|gb|EFO35917.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           Peru-466]
 gi|308092230|gb|EFO41925.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AN-5034]
 gi|308109302|gb|EFO46842.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ4037]
 gi|308115005|gb|EFO52545.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           K5030]
 gi|328470103|gb|EGF41014.1| flagellar basal body rod protein FlgG [Vibrio parahaemolyticus
           10329]
          Length = 261

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V ++    S    
Sbjct: 54 AQVDQVNELPSGVQL 68


>gi|209547530|ref|YP_002279448.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii
          WSM2304]
 gi|209538774|gb|ACI58708.1| protein of unknown function DUF1078 domain protein [Rhizobium
          leguminosarum bv. trifolii WSM2304]
          Length = 430

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 30/61 (49%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A SG++ Q+ R+  +S+NIANA T G    S  +    +      + SGGV+ 
Sbjct: 3  IFGSMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSGNYNSGGVQT 62

Query: 64 K 64
           
Sbjct: 63 S 63



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 383 QSGALESSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 430


>gi|307318929|ref|ZP_07598360.1| fagellar hook-basal body protein [Sinorhizobium meliloti AK83]
 gi|306895343|gb|EFN26098.1| fagellar hook-basal body protein [Sinorhizobium meliloti AK83]
          Length = 402

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 14/67 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          L  +     SG+  QS R+  ++ENIANA TTG       Y+R +  F  ++       +
Sbjct: 3  LYGTMRTGVSGMNAQSNRLSTVAENIANANTTG-------YKRASTEFSSMILPSGNGSY 55

Query: 57 GSGGVRV 63
           SGGV+ 
Sbjct: 56 NSGGVQT 62



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E   M E+ R Y AN +  +   +++   ++L R
Sbjct: 356 SGALESSNVDIAEELTAMIESQRNYTANSKVFQTGSELLEVLVNLKR 402


>gi|307131607|ref|YP_003883623.1| flagellar basal-body rod protein flgG [Dickeya dadantii 3937]
 gi|306529136|gb|ADM99066.1| Flagellar basal-body rod protein flgG [Dickeya dadantii 3937]
          Length = 260

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV  E   M +T R Y  N + I  +  M+     L
Sbjct: 218 FVETSNVNVAEELVSMIQTQRAYEINSKAISSTDQMLQKLTQL 260



 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+ +
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMYQT 48


>gi|260437439|ref|ZP_05791255.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM
           2876]
 gi|292810071|gb|EFF69276.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM
           2876]
          Length = 284

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V  E  ++    R Y  N + I+ + DM+     L R
Sbjct: 238 QGRLEASNVQVADEMVNLIVAQRAYEMNSKAIQAADDMLGQANQLKR 284



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A SG+  Q   + +IS N+AN  +TG       Y+  T  F+ +++ +   R 
Sbjct: 1  MMRALYTAASGMIAQQTNVDVISNNLANVNSTG-------YKASTAEFKSLLYQTLQSRS 53

Query: 64 KKIGVDQSTFV 74
               D     
Sbjct: 54 TSANGDDKPIP 64


>gi|152997580|ref|YP_001342415.1| flagellar basal-body rod protein FlgG [Marinomonas sp. MWYL1]
 gi|150838504|gb|ABR72480.1| flagellar basal-body rod protein FlgG [Marinomonas sp. MWYL1]
          Length = 261

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           A G+++  NVN + E  +M  T R Y  N + I  +  MM+  + 
Sbjct: 215 AQGMLEASNVNSIEELVNMITTQRAYEMNSKVIASADGMMSFAIQ 259



 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + ++  ++ +GL+    ++ +++ N+AN  TT        +++    FE++M+ +
Sbjct: 1  MNSALWVSKTGLSAMDKQLNVVANNLANVSTTA-------FKKDRAVFEDLMYKT 48


>gi|91224197|ref|ZP_01259460.1| putative flagellar basal-body rod protein [Vibrio alginolyticus
           12G01]
 gi|269965646|ref|ZP_06179759.1| Putative flagellar basal-body rod protein flgG [Vibrio
           alginolyticus 40B]
 gi|91191108|gb|EAS77374.1| putative flagellar basal-body rod protein [Vibrio alginolyticus
           12G01]
 gi|269829714|gb|EEZ83950.1| Putative flagellar basal-body rod protein flgG [Vibrio
           alginolyticus 40B]
          Length = 261

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V ++    S    
Sbjct: 54 AQVDQVNELPSGIQL 68


>gi|304397206|ref|ZP_07379085.1| flagellar basal-body rod protein FlgG [Pantoea sp. aB]
 gi|308186395|ref|YP_003930526.1| Flagellar basal-body rod protein flgG [Pantoea vagans C9-1]
 gi|304355355|gb|EFM19723.1| flagellar basal-body rod protein FlgG [Pantoea sp. aB]
 gi|308056905|gb|ADO09077.1| Flagellar basal-body rod protein flgG [Pantoea vagans C9-1]
          Length = 260

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 19/45 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G  +  NVNV  E   M +T R Y  N + I  S  M+     L
Sbjct: 216 QGYTETSNVNVAEELVTMIQTQRAYEINSKAISTSDQMLAKLTQL 260



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R    FE++M+ +
Sbjct: 1  MIRSLWIAKTGLDAQQMNMDVIANNLANVSTNG-------FKRSRAVFEDLMYQT 48


>gi|86360902|ref|YP_472789.1| flagellar hook protein FlgE [Rhizobium etli CFN 42]
 gi|86285004|gb|ABC94062.1| flagellar hook protein [Rhizobium etli CFN 42]
          Length = 430

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 30/61 (49%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A SG++ Q+ R+  +S+NIANA T G    S  +    +      + SGGV+ 
Sbjct: 3  IFGSMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSGNYNSGGVQT 62

Query: 64 K 64
           
Sbjct: 63 S 63



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 383 QSGALESSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 430


>gi|258404727|ref|YP_003197469.1| flagellar basal-body rod protein FlgG [Desulfohalobium retbaense
           DSM 5692]
 gi|257796954|gb|ACV67891.1| flagellar basal-body rod protein FlgG [Desulfohalobium retbaense
           DSM 5692]
          Length = 262

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 23/48 (47%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A A   ++  NV+ + E  +M    R Y  N + +K + +M+  T  L
Sbjct: 214 ALAQNFLEDSNVSTMQEMVNMISAQRAYEINSKAVKTADEMLQMTNQL 261



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 28/56 (50%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          +  +   A +G+  Q   + +I+ N+AN  TTG       +++  + F+++++   
Sbjct: 1  MTTALSTAATGMEAQQTIVDVIANNLANVNTTG-------FKKSRVDFQDLLYQDA 49


>gi|212637785|ref|YP_002314310.1| flagellar hook protein FlgE [Shewanella piezotolerans WP3]
 gi|212559269|gb|ACJ31723.1| Flagellar basal body rod protein FlaE [Shewanella piezotolerans
           WP3]
          Length = 402

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ASG ++  NV+   E   +    R Y +N + +  +  M    L+
Sbjct: 356 ASGYLEGSNVDTTAEMVSLMTAQRNYQSNAKVLDANSTMQQALLN 400



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 9/61 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIAN+ T G       +R     F  + +G  +GGV V 
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANSSTVG-------FRSGRSEFSAIYNGGQAGGVNVM 54

Query: 65 K 65
           
Sbjct: 55 S 55


>gi|163803171|ref|ZP_02197054.1| putative flagellar basal-body rod protein [Vibrio sp. AND4]
 gi|159173071|gb|EDP57904.1| putative flagellar basal-body rod protein [Vibrio sp. AND4]
          Length = 261

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVG-------FKRDRVVFEDLFYSIQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V ++    S    
Sbjct: 54 AQVDQVNELPSGVQL 68


>gi|307546968|ref|YP_003899447.1| flagellar hook protein FlgE [Halomonas elongata DSM 2581]
 gi|307218992|emb|CBV44262.1| flagellar hook protein FlgE [Halomonas elongata DSM 2581]
          Length = 422

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 28/46 (60%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG+V+  NV++  E  DM  T R Y AN QTIK   +++ T ++L
Sbjct: 376 QSGVVESSNVDMAQELVDMIVTQRAYQANSQTIKTQDEVLQTAINL 421



 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + ++  NIAN++T G       ++     F +V   S    G +V ++ 
Sbjct: 6  ALSGLNAASSSLDVLGNNIANSQTVG-------FKGSDTLFADVYANSKVGLGTKVSRVL 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|302343734|ref|YP_003808263.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
 gi|301640347|gb|ADK85669.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
          Length = 786

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E   M    R Y AN ++I  +  M+   ++L R
Sbjct: 739 ESGALEQSNVDLATEMVKMILYQRAYQANSKSISTTDQMLQELINLKR 786


>gi|219685570|ref|ZP_03540386.1| flagellar basal-body rod protein FlgG [Borrelia garinii Far04]
 gi|219672848|gb|EED29871.1| flagellar basal-body rod protein FlgG [Borrelia garinii Far04]
          Length = 265

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 218 QGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|157373207|ref|YP_001471807.1| flagellar hook protein FlgE [Shewanella sediminis HAW-EB3]
 gi|157315581|gb|ABV34679.1| flagellar basal body FlaE [Shewanella sediminis HAW-EB3]
          Length = 398

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           G ++  NV+   E   +    R Y +N + +  +  M    L+
Sbjct: 354 GYLEGSNVDTTAEMVSLMTAQRNYQSNAKVLDANSTMQQALLN 396



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 9/61 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIAN+ T G       YR     F  V +G  +GGV V 
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANSSTVG-------YRGGRSEFSAVYNGGQAGGVNVM 54

Query: 65 K 65
           
Sbjct: 55 S 55


>gi|22127325|ref|NP_670748.1| flagellar basal body rod protein FlgG [Yersinia pestis KIM 10]
 gi|45442798|ref|NP_994337.1| flagellar basal body rod protein FlgG [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51597635|ref|YP_071826.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           IP 32953]
 gi|108809053|ref|YP_652969.1| flagellar basal body rod protein FlgG [Yersinia pestis Antiqua]
 gi|108810750|ref|YP_646517.1| flagellar basal body rod protein FlgG [Yersinia pestis Nepal516]
 gi|145597819|ref|YP_001161895.1| flagellar basal body rod protein FlgG [Yersinia pestis Pestoides F]
 gi|150260247|ref|ZP_01916975.1| lateral flagellar basal body rod protein [Yersinia pestis
           CA88-4125]
 gi|153947407|ref|YP_001399636.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           IP 31758]
 gi|162421910|ref|YP_001604845.1| flagellar basal body rod protein FlgG [Yersinia pestis Angola]
 gi|165925150|ref|ZP_02220982.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939077|ref|ZP_02227629.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008679|ref|ZP_02229577.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212222|ref|ZP_02238257.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399088|ref|ZP_02304612.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419078|ref|ZP_02310831.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425222|ref|ZP_02316975.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167466335|ref|ZP_02331039.1| flagellar basal-body rod protein FlgG [Yersinia pestis FV-1]
 gi|186896769|ref|YP_001873881.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           PB1/+]
 gi|218927914|ref|YP_002345789.1| flagellar basal body rod protein FlgG [Yersinia pestis CO92]
 gi|229837410|ref|ZP_04457573.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
 gi|229840625|ref|ZP_04460784.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842824|ref|ZP_04462976.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900947|ref|ZP_04516071.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
 gi|270487670|ref|ZP_06204744.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
 gi|294502791|ref|YP_003566853.1| putative flagellar basal-body rod protein [Yersinia pestis Z176003]
 gi|21960406|gb|AAM86999.1|AE013948_7 flagellar biosynthesis protein, cell-distal portion of basal-body
           rod [Yersinia pestis KIM 10]
 gi|45437664|gb|AAS63214.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51590917|emb|CAH22573.1| putative flagellar basal-body rod protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774398|gb|ABG16917.1| flagellar basal-body rod protein [Yersinia pestis Nepal516]
 gi|108780966|gb|ABG15024.1| putative flagellar basal-body rod protein [Yersinia pestis Antiqua]
 gi|115346525|emb|CAL19402.1| putative flagellar basal-body rod protein [Yersinia pestis CO92]
 gi|145209515|gb|ABP38922.1| flagellar basal-body rod protein [Yersinia pestis Pestoides F]
 gi|149289655|gb|EDM39732.1| lateral flagellar basal body rod protein [Yersinia pestis
           CA88-4125]
 gi|152958902|gb|ABS46363.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           IP 31758]
 gi|162354725|gb|ABX88673.1| flagellar basal-body rod protein FlgG [Yersinia pestis Angola]
 gi|165913033|gb|EDR31658.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923350|gb|EDR40501.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992018|gb|EDR44319.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206968|gb|EDR51448.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166963072|gb|EDR59093.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051592|gb|EDR63000.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055985|gb|EDR65766.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|186699795|gb|ACC90424.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           PB1/+]
 gi|229682286|gb|EEO78378.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
 gi|229690091|gb|EEO82148.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696991|gb|EEO87038.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705533|gb|EEO91543.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
 gi|262360823|gb|ACY57544.1| putative flagellar basal-body rod protein [Yersinia pestis D106004]
 gi|262364768|gb|ACY61325.1| putative flagellar basal-body rod protein [Yersinia pestis D182038]
 gi|270336174|gb|EFA46951.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
 gi|294353250|gb|ADE63591.1| putative flagellar basal-body rod protein [Yersinia pestis Z176003]
 gi|320016709|gb|ADW00281.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 261

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM    R Y  N + +  + DM+
Sbjct: 215 EQGALEGSNVQVVEEMVDMITVQRAYEMNAKMVSAADDML 254



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + ++  ++ +GLA Q A+M  IS N+AN  T G       ++R  + F ++ + + 
Sbjct: 1  MNSALWVSKTGLAAQDAKMGAISNNLANVNTDG-------FKRDRVVFADLFYQNQ 49


>gi|326796595|ref|YP_004314415.1| flagellar basal-body rod protein FlgG [Marinomonas mediterranea
           MMB-1]
 gi|326547359|gb|ADZ92579.1| flagellar basal-body rod protein FlgG [Marinomonas mediterranea
           MMB-1]
          Length = 261

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G+++  NVN + E  +M  T R Y  N + I  +  M+
Sbjct: 216 QGMLEASNVNSVEELVNMITTQRAYEMNSKVISTADGML 254



 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +   A +GL     ++ +IS N+AN  TTG       ++++   FE +M+ +
Sbjct: 1  MQTALWTAKTGLTAMDRQLSVISNNLANVSTTG-------FKKERAVFENLMYQT 48


>gi|251789170|ref|YP_003003891.1| flagellar basal-body rod protein FlgG [Dickeya zeae Ech1591]
 gi|247537791|gb|ACT06412.1| flagellar basal-body rod protein FlgG [Dickeya zeae Ech1591]
          Length = 260

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV  E   M +T R Y  N + I  +  M+     L
Sbjct: 218 FVETSNVNVAEELVSMIQTQRAYEINSKAISSTDQMLQKLTQL 260



 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++M+ +
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLMYQT 48


>gi|224534580|ref|ZP_03675156.1| flagellar basal-body rod protein FlgG [Borrelia spielmanii A14S]
 gi|224514257|gb|EEF84575.1| flagellar basal-body rod protein FlgG [Borrelia spielmanii A14S]
          Length = 265

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 218 QGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|225551864|ref|ZP_03772807.1| flagellar basal-body rod protein FlgG [Borrelia sp. SV1]
 gi|225371659|gb|EEH01086.1| flagellar basal-body rod protein FlgG [Borrelia sp. SV1]
          Length = 265

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 218 QGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|219685599|ref|ZP_03540415.1| flagellar hook-basal body complex protein [Borrelia garinii Far04]
 gi|219672877|gb|EED29900.1| flagellar hook-basal body complex protein [Borrelia garinii Far04]
          Length = 282

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            +G ++  NVN + E   M E NR Y AN +TI+    ++   + ++ +
Sbjct: 233 ETGALEASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 11 ANSGLAVQSARMQIISENIANARTTG 36
          A SG+  +  ++ ++S N+AN    G
Sbjct: 8  AASGMMAERHKLDVVSNNLANIDLVG 33


>gi|219684370|ref|ZP_03539314.1| flagellar hook-basal body complex protein [Borrelia garinii PBr]
 gi|219672359|gb|EED29412.1| flagellar hook-basal body complex protein [Borrelia garinii PBr]
          Length = 282

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            +G ++  NVN + E   M E NR Y AN +TI+    ++   + ++ +
Sbjct: 233 ETGALEASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 11 ANSGLAVQSARMQIISENIANARTTG 36
          A SG+  +  ++ ++S N+AN    G
Sbjct: 8  AASGMMAERHKLDVVSNNLANIDLVG 33


>gi|51599026|ref|YP_073214.1| flagellar hook-basal body complex protein [Borrelia garinii PBi]
 gi|51573597|gb|AAU07622.1| flagellar hook-basal body complex protein [Borrelia garinii PBi]
          Length = 282

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            +G ++  NVN + E   M E NR Y AN +TI+    ++   + ++ +
Sbjct: 233 ETGALEASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 14/23 (60%)

Query: 11 ANSGLAVQSARMQIISENIANAR 33
          A SG+  +  ++ ++S N+AN  
Sbjct: 8  AASGMMAERHKLDVVSNNLANID 30


>gi|229544402|ref|ZP_04433460.1| protein of unknown function DUF1078 domain protein [Bacillus
           coagulans 36D1]
 gi|229324887|gb|EEN90564.1| protein of unknown function DUF1078 domain protein [Bacillus
           coagulans 36D1]
          Length = 254

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 48  TISFEEVMHGSGGVRVKK----IGVDQSTFVEEFDPGHPVAN--ASGIVKYPNVNVLVET 101
           TIS     + +G  +V           +  V    PG   A    SG ++  NV++  E 
Sbjct: 163 TISIATFQNPAGLTKVGGNLYTTTNSNAGTVTVSQPGQNGAGTIKSGYLEMSNVDLSEEL 222

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +M    R + AN + I  S +++   ++L R
Sbjct: 223 TNMIVAERGFQANTRIITTSDEILQELVNLKR 254



 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 12/69 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-----EEVMHGS 58
          ++ S +   SG+      +  I  NIAN  T G       Y++  ++F     + +   +
Sbjct: 1  MLRSLYSGVSGMKNFQTELDTIGNNIANVNTYG-------YKKGRVTFKDAISQTLASAT 53

Query: 59 GGVRVKKIG 67
           G   +++G
Sbjct: 54 PGTSAQQVG 62


>gi|291617022|ref|YP_003519764.1| FlgG [Pantoea ananatis LMG 20103]
 gi|291152052|gb|ADD76636.1| FlgG [Pantoea ananatis LMG 20103]
 gi|327393473|dbj|BAK10895.1| flagellar basal-body rod protein FlgG [Pantoea ananatis AJ13355]
          Length = 260

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 19/45 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G  +  NVNV  E   M +T R Y  N + I  S  M+     L
Sbjct: 216 QGYAETSNVNVAEELVTMIQTQRAYEINSKAISTSDQMLAKLTQL 260



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +I+ N+AN  T G       ++R    FE++M+ +
Sbjct: 1  MIRSLWIAKTGLDAQQMNMDVIANNLANVSTNG-------FKRSRAVFEDLMYQT 48


>gi|261341492|ref|ZP_05969350.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316288|gb|EFC55226.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
           ATCC 35316]
          Length = 261

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM    R Y  N + +  + DM+
Sbjct: 215 EQGSLEGSNVQVVEEMVDMITVQRAYEMNAKMVSAADDML 254



 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 10/59 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M+    +  I+ +GLA Q A+M  IS N+AN  TTG       ++R  + F ++ + + 
Sbjct: 1  MNP---ALWISKTGLAAQDAKMSAISNNLANVNTTG-------FKRDRVMFADLFYQNQ 49


>gi|78067835|ref|YP_370604.1| flagellar basal body rod protein FlgG [Burkholderia sp. 383]
 gi|77968580|gb|ABB09960.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 262

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 218 YVESSNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQM 260



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S +IA +G+  Q A+M +IS N+AN  T G       ++     FE++++ +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANTSTNG-------FKASRAVFEDLLYQT 48


>gi|296103609|ref|YP_003613755.1| Flagellar basal-body rod protein, FlgG [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058068|gb|ADF62806.1| Flagellar basal-body rod protein, FlgG [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 260

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVNV  E   M +  R Y  N + +  S  M+     L
Sbjct: 218 YVEISNVNVAEELVTMIQVQRAYEINSKAVSASDQMLQRLSQL 260



 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   F+++++ +
Sbjct: 1  MIRSLWIAKTGLEAQQLNMDVISNNLANVNTNG-------FKRQRAVFQDLLYQN 48


>gi|283852232|ref|ZP_06369505.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
 gi|283572458|gb|EFC20445.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
          Length = 518

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 87  SGI-VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG  ++  NV++  E  ++    R + +N + +  +  MM   L++
Sbjct: 471 SGYSLESSNVDMATEMVNLITLQRAFQSNSKVVTTADTMMEKALEI 516


>gi|121607559|ref|YP_995366.1| flagellar basal-body rod protein FlgG [Verminephrobacter eiseniae
           EF01-2]
 gi|121552199|gb|ABM56348.1| flagellar basal-body rod protein FlgG [Verminephrobacter eiseniae
           EF01-2]
          Length = 260

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  N+N++ E   M +T R Y  N + I+ S  M+     L
Sbjct: 215 KQGFLEASNINIVEELVTMIQTQRAYEMNSKAIQTSDQMLAKLSQL 260



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I +  IA +G++ Q  ++ +I+ N+AN  TTG       Y+R    FE++++ +
Sbjct: 1  MIDALWIAKTGMSAQQTQLDVIAHNLANVSTTG-------YKRSNAMFEDLIYQN 48


>gi|219684180|ref|ZP_03539124.1| flagellar basal-body rod protein FlgG [Borrelia garinii PBr]
 gi|219672169|gb|EED29222.1| flagellar basal-body rod protein FlgG [Borrelia garinii PBr]
          Length = 265

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 218 QGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|167567752|ref|ZP_02360668.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis
           EO147]
 gi|167574703|ref|ZP_02367577.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis
           C6786]
          Length = 258

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV V+ E  +M    R Y  N + +  +  M+ 
Sbjct: 211 KQGSLEASNVKVVDEMVEMIAAQRTYEMNTKVLSAADSMLQ 251


>gi|28211323|ref|NP_782267.1| flagellar hook protein flgE [Clostridium tetani E88]
 gi|28203763|gb|AAO36204.1| flagellar hook protein flgE [Clostridium tetani E88]
          Length = 365

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 7/63 (11%)

Query: 78  DPGHPVANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           DP +  +N  G        ++  NV++  +  +M   +R + AN + I    +++   ++
Sbjct: 303 DPTNDKSNEKGYGDIIQGRLEMSNVDLAEQFTEMIVASRAFQANGKIITTGDEILQDLVN 362

Query: 131 LLR 133
           L R
Sbjct: 363 LKR 365



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          Y++ S     SGL     ++ +I  NIAN  TT        ++ + I F++V+  +
Sbjct: 23 YMLRSMFSGISGLKANQTKLDVIGNNIANVNTTA-------FKNQRIRFQDVLSQN 71


>gi|322435952|ref|YP_004218164.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9]
 gi|321163679|gb|ADW69384.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9]
          Length = 262

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV+V+ E   M    R Y +N + +  + DM      ++R
Sbjct: 215 EQGYLENSNVDVVTEFVQMILAQRAYESNSKVVHVADDMYQQINGMIR 262



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + A SG++ Q A +  I+ N+AN+ T G       +R + + FE++++ +
Sbjct: 1  MIRALYTAASGMSAQQANLDTIANNLANSATAG-------FRSRRVQFEDMIYQN 48


>gi|313682110|ref|YP_004059848.1| flagellar basal-body rod protein flgg [Sulfuricurvum kujiense DSM
           16994]
 gi|313154970|gb|ADR33648.1| flagellar basal-body rod protein FlgG [Sulfuricurvum kujiense DSM
           16994]
          Length = 262

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NV ++VE  D+    R Y AN + I  S +M+ TT  L R
Sbjct: 216 QGFVELSNVQLVVELTDLITGQRAYDANSKVITTSDEMLATTNGLKR 262



 Score = 37.2 bits (86), Expect = 0.81,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 10/71 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S + +++G+     ++   + NIAN  T G       Y++    F ++M+      G
Sbjct: 1  MMQSLYTSSTGMLSMQTQIDTTANNIANVNTMG-------YKKSRAEFADLMYKVMTYAG 53

Query: 61 VRVKKIGVDQS 71
                    +
Sbjct: 54 TSTSDTTKSPT 64


>gi|225849135|ref|YP_002729299.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225644492|gb|ACN99542.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 266

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN++ E  ++    R Y  N + I  + +M+  T+  L+
Sbjct: 220 QGFLEASNVNIVEEMVNLIVAQRAYEVNSKGIITADEML-RTVSTLK 265



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 38/131 (29%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
           ++ +   + SG+  Q   + +IS NIAN  T G       ++R   +FE++++       
Sbjct: 1   MLRALWTSASGMEAQQTNLDVISHNIANVNTVG-------FKRSRANFEDLIYQDIRDPG 53

Query: 58  ---------------SGGVRVKKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                            GV+V  +     Q + ++  +P        G  K       +E
Sbjct: 54  VLSSTQNRVPAGIQIGLGVKVSDVAKIFSQGSLIKTDNPLDLAIQGDGFFK-------IE 106

Query: 101 TADMRET-NRL 110
             D  E   R 
Sbjct: 107 MPDGSEAFTRA 117


>gi|209964690|ref|YP_002297605.1| flagellar basal body rod protein FlgG [Rhodospirillum centenum SW]
 gi|209958156|gb|ACI98792.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum SW]
          Length = 261

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 5/53 (9%)

Query: 80  GHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           G+P A   G V     +  NVN++ E  ++    R Y  N + I  S  MM +
Sbjct: 204 GNPGAPGFGRVIQQALETSNVNIVSEITNLITAQRAYEMNSRVISTSDQMMQS 256



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 8/71 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + S  I  +G+  Q   +++IS NIAN  TTG       ++R+   F+++++ +   RV 
Sbjct: 1  MRSLSIGATGMLAQQLNVEVISNNIANMTTTG-------FKRQRAEFQDLLYQNMR-RVG 52

Query: 65 KIGVDQSTFVE 75
              D  T V 
Sbjct: 53 STSSDAGTVVP 63


>gi|150388209|ref|YP_001318258.1| flagellar basal body rod protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149948071|gb|ABR46599.1| flagellar basal body rod protein [Alkaliphilus metalliredigens
           QYMF]
          Length = 363

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  N+N + E  +M  T R Y AN + ++   +++   + ++ +
Sbjct: 315 QGYLEESNINSIQEMVEMISTFRDYEANQKVVQAYDEILQKAVGEIGK 362



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 44/137 (32%)

Query: 4   LIASAHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----FEEVM--- 55
           +    + A SG+   Q   + + S NIAN  TTG         +K +     F EV+   
Sbjct: 1   MFRGLYTATSGMQTAQRK-LDVTSNNIANINTTG--------FKKDVVAAESFPEVLIRK 51

Query: 56  ----------HGSGGVRVKKIGV------DQSTFVEEFDPG---HPVA----NASGIVKY 92
                     + + GV V + G       D   F  E D G   +  A    +  G ++ 
Sbjct: 52  INHDIRPRPFNLNSGVEVTREGEALGLSTDAGFFRVETDQGISHNREASFAPDEDGFLRT 111

Query: 93  PNVNVLVETADMRETNR 109
              ++  E     + +R
Sbjct: 112 YRRDLNGE----IDASR 124


>gi|288958675|ref|YP_003449016.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288910983|dbj|BAI72472.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 261

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G+P A   G V     +  NVNV+ E   +    R Y  N + IK + +MM     +
Sbjct: 204 GNPGAPGFGRVTQGALETSNVNVVQEITTLITAQRAYEMNSKVIKTTDEMMQQASQM 260



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + S  I  +G+  Q   ++ IS NIAN+ TTG       Y+++   F+++++ +
Sbjct: 1  MRSLAIGATGMIAQQLNVETISNNIANSTTTG-------YKKQRAEFQDLLYQN 47


>gi|99082800|ref|YP_614954.1| flagellar basal body rod protein FlgG [Ruegeria sp. TM1040]
 gi|99039080|gb|ABF65692.1| Flagellar basal-body rod protein flgG [Ruegeria sp. TM1040]
          Length = 261

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R++ IS N+AN  TT        Y  +   F ++
Sbjct: 1  MRALKIAATGMSAQQLRVETISNNLANMNTTA-------YNARRAEFADL 43



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 78  DPGHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +   P A+  G      ++  +V+ + E  ++ E  R Y  N + I     MM+ T
Sbjct: 202 NTTEPGADGIGFLRQKYLEDSSVDAVREITELIEAQRGYEMNSKVISAVDQMMSAT 257


>gi|218463663|ref|ZP_03503754.1| hypothetical protein RetlK5_31494 [Rhizobium etli Kim 5]
          Length = 106

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 39/114 (34%), Gaps = 32/114 (28%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           + A SG+  Q+ R+  I+ NIAN      TP    Y R   S   V   SGGV+      
Sbjct: 8   NTALSGMRAQTTRIGAIANNIAN----SSTPD---YARLNTSLTAVT--SGGVKAVV--- 55

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
                        P A         +V+   E  D+ E    Y AN    +   
Sbjct: 56  ------------SPTA--------SDVDPATELTDLLEAELAYKANAVVFETRR 89


>gi|260574401|ref|ZP_05842405.1| flagellar basal-body rod protein FlgG [Rhodobacter sp. SW2]
 gi|259023297|gb|EEW26589.1| flagellar basal-body rod protein FlgG [Rhodobacter sp. SW2]
          Length = 261

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA SG+A Q  R+ ++S N+AN  TTG       Y  +   F ++
Sbjct: 1  MNALQIAASGMAAQQMRVDVVSNNLANMSTTG-------YNARRADFADL 43



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  +V+ + E  ++ +  R Y  N + I  +  M++ T  L
Sbjct: 216 QGYLEESSVDAVREVTELIKAQRGYELNAKVITAADQMLSATTQL 260


>gi|238923133|ref|YP_002936646.1| flagellar basal body and hook protein [Eubacterium rectale ATCC
           33656]
 gi|238874805|gb|ACR74512.1| flagellar basal body and hook protein [Eubacterium rectale ATCC
           33656]
          Length = 272

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV V  E  ++    R Y  N + I  +  M+ T  +L R
Sbjct: 226 TGYLEGSNVQVADEMVNLIVAQRAYELNSKAITTADSMLETANNLRR 272



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + + A +G+  +   +  I+ N++N  TTG
Sbjct: 1  MMRALYTAATGMRAEQTNVDTIANNLSNVNTTG 33


>gi|307823533|ref|ZP_07653762.1| flagellar basal-body rod protein FlgG [Methylobacter tundripaludum
           SV96]
 gi|307735518|gb|EFO06366.1| flagellar basal-body rod protein FlgG [Methylobacter tundripaludum
           SV96]
          Length = 262

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ E  +M ET R Y  N + I  +  M++
Sbjct: 217 QGSLETSNVNVVEELVNMIETQRAYEMNSKAISTTDQMLS 256



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +A SGL  Q  RM +IS N+AN  TTG       ++R    FE++M+ +
Sbjct: 8  VAKSGLDAQQTRMAVISNNLANVNTTG-------FKRGRAVFEDLMYQN 49


>gi|83594175|ref|YP_427927.1| flagellar basal body rod protein FlgG [Rhodospirillum rubrum ATCC
           11170]
 gi|83577089|gb|ABC23640.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 261

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ E  ++    R Y  N + I  S +M++
Sbjct: 216 QGYLESSNVNVVSEITELISAQRAYEMNSKVITTSDEMLS 255



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + + +I  +G+  Q   +++IS NIAN  TT        Y R+   F ++++ +
Sbjct: 1  MRALNIGATGMLAQQTNVEVISNNIANMNTTA-------YTRRRAEFHDLLYQN 47


>gi|319650828|ref|ZP_08004965.1| flagellar basal-body rod protein [Bacillus sp. 2_A_57_CT2]
 gi|317397426|gb|EFV78127.1| flagellar basal-body rod protein [Bacillus sp. 2_A_57_CT2]
          Length = 279

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
             G ++  NV+      DM    R + AN + ++     M     ++ R
Sbjct: 229 QQGYLERSNVDASRTMTDMMTAYRSFEANQKVLQAYDRSMEKAANEIGR 277



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          +    + A SG+  Q  R ++++ N+ANA T G        R 
Sbjct: 1  MFRGFYTAASGMLAQQRRTEVLTNNMANANTPGFKADQTSLRA 43


>gi|288574697|ref|ZP_06393054.1| flagellar basal-body rod protein FlgG [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570438|gb|EFC91995.1| flagellar basal-body rod protein FlgG [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 262

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             GI++  NV V+ E  ++    R Y AN +TI+ +  ++     L R
Sbjct: 215 QQGILERSNVQVVEEMVNLIVAQRAYEANSKTIQTADRLLEVANGLKR 262



 Score = 43.4 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +I S     +G+  Q   + + S N+AN  T G       Y++   +F ++++ 
Sbjct: 1  MIRSLWTGATGMVAQQTNLDVTSNNLANVNTVG-------YKKVRTNFADLLYQ 47


>gi|225377358|ref|ZP_03754579.1| hypothetical protein ROSEINA2194_03006 [Roseburia inulinivorans DSM
           16841]
 gi|225210783|gb|EEG93137.1| hypothetical protein ROSEINA2194_03006 [Roseburia inulinivorans DSM
           16841]
          Length = 271

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V  E  ++    R Y  N + I  S DM+    +L R
Sbjct: 225 QGYLEGSNVQVADEMVNLIVAQRAYQLNSKAITTSDDMLEQANNLKR 271



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 7/69 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A SG+  Q   +  IS NIAN  TT        ++ +   F+ +++ +   R 
Sbjct: 1  MMRALYTAASGMRAQQTNVDNISNNIANVNTTA-------FKSQKTEFKSLLYQTIQTRT 53

Query: 64 KKIGVDQST 72
               ++  
Sbjct: 54 TSANGEEKP 62


>gi|169831888|ref|YP_001717870.1| flagellar basal body rod protein [Candidatus Desulforudis
          audaxviator MP104C]
 gi|169638732|gb|ACA60238.1| flagellar basal body rod protein [Candidatus Desulforudis
          audaxviator MP104C]
          Length = 246

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---VRVKKIG 67
          A SG+     R+  ++ NIAN  TTG       +RR+   F   +  + G    RV  IG
Sbjct: 8  AASGMLAGQTRLDAVAHNIANVNTTG-------FRRQVPVFAPYLQTAVGRHEKRVTPIG 60



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NV++ VE  D+   +RLY AN +  +    ++   ++
Sbjct: 197 QGYLEGSNVHLAVELVDLLLASRLYAANQRVARTQDTLVEKAIN 240


>gi|319790434|ref|YP_004152067.1| flagellar basal-body rod protein FlgG [Thermovibrio ammonificans
           HB-1]
 gi|317114936|gb|ADU97426.1| flagellar basal-body rod protein FlgG [Thermovibrio ammonificans
           HB-1]
          Length = 266

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVN++ E  ++    R Y  N + I  + +M+ 
Sbjct: 220 QGFLEASNVNIVEEMVNLIVAQRAYEINSKGIIAADEMLR 259



 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +   + SG+  Q   + +IS NIAN  T G       ++R   +FE++M+ 
Sbjct: 1  MLRALWTSASGMEAQQTNLDVISNNIANVNTVG-------FKRSRANFEDLMYQ 47


>gi|294679031|ref|YP_003579646.1| flagellar basal-body rod protein FlgG [Rhodobacter capsulatus SB
          1003]
 gi|294477851|gb|ADE87239.1| flagellar basal-body rod protein FlgG [Rhodobacter capsulatus SB
          1003]
          Length = 261

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + +  IA +G++ Q  R+++IS N+AN  TTG       Y  +   F ++M+   
Sbjct: 1  MRALQIAATGMSAQQMRVEVISNNLANMSTTG-------YNARRAEFADLMYQQA 48



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 21/43 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             G ++  +V+ + E  ++ +  R Y  N + I  + +M+  T
Sbjct: 215 KQGYLEESSVDAVREITELIKAQRGYEMNAKVITAADEMLQAT 257


>gi|258622490|ref|ZP_05717512.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
           VM573]
 gi|258625232|ref|ZP_05720144.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
           VM603]
 gi|258582479|gb|EEW07316.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
           VM603]
 gi|258585190|gb|EEW09917.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
           VM573]
          Length = 261

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 215 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSATDDML 254



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 10/68 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTAG-------FKRDRVVFEDLFYNIQRQPG 53

Query: 61 VRVKKIGV 68
           +V ++  
Sbjct: 54 AQVDQVNE 61


>gi|78777301|ref|YP_393616.1| flagellar basal body rod protein FlgG [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497841|gb|ABB44381.1| Flagellar basal-body rod FlgG [Sulfurimonas denitrificans DSM 1251]
          Length = 262

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NV ++VE  D+    R Y +N + I  S +M+ TT +L R
Sbjct: 216 QGFVELSNVELVVELTDLITGQRAYDSNSKVITTSDEMLQTTNNLKR 262



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 10/71 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S + A++G+     ++   + NIAN  T G       +++    F ++M+      G
Sbjct: 1  MMQSLYTASTGMIGMQTQINTTANNIANVNTIG-------FKKSRAEFADLMYKVMDYAG 53

Query: 61 VRVKKIGVDQS 71
               +    +
Sbjct: 54 TSTSDVTKSPT 64


>gi|222530299|ref|YP_002574181.1| flagellar basal body rod protein [Caldicellulosiruptor bescii DSM
           6725]
 gi|222457146|gb|ACM61408.1| flagellar basal body rod protein [Caldicellulosiruptor bescii DSM
           6725]
          Length = 255

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NVN + E  +M    R Y AN +      + +   + ++ R
Sbjct: 207 QGYLEGSNVNSVQEMVNMISVLRAYEANQKAFVIQDETLQKAVNEIAR 254



 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I   + + SG+ +    M I + N+AN  TTG
Sbjct: 1  MIRGIYTSASGMILNQKLMDITANNVANVSTTG 33


>gi|158422258|ref|YP_001523550.1| flagellar basal body rod protein FlgG [Azorhizobium caulinodans ORS
           571]
 gi|158329147|dbj|BAF86632.1| flagellar basal-body rod FlgG protein [Azorhizobium caulinodans ORS
           571]
          Length = 262

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
             G ++  NV+ + E  ++    R Y  N + I+ + +M
Sbjct: 215 QQGYLEASNVDPVKEITELIAAQRSYEMNSKVIQAADEM 253



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ S
Sbjct: 1  MRALAIAATGMNAQQTNVEVIANNIANINTTG-------FKRARAEFSDLLYQS 47


>gi|159045919|ref|YP_001534713.1| flagellar hook protein FlgE [Dinoroseobacter shibae DFL 12]
 gi|157913679|gb|ABV95112.1| flagellar hook protein FlgE [Dinoroseobacter shibae DFL 12]
          Length = 434

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 17/87 (19%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          + +S +   SGL   + R+  IS+NIAN+ T G       Y+R    F+ ++        
Sbjct: 3  ISSSLNAGVSGLNANATRLATISDNIANSSTYG-------YKRAEADFQSLVINGNSSGT 55

Query: 56 HGSGGVRV--KKIGVDQSTFVEEFDPG 80
          + +GGVRV   ++  +Q   V   +P 
Sbjct: 56 YSAGGVRVTTTRVIDEQGPLVTTSNPT 82



 Score = 39.1 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E   +  T R Y +N + I+   +M+  T ++ R
Sbjct: 397 DVAGELTRLITTQRAYSSNAKIIQTVDEMLQETTNIKR 434


>gi|328543156|ref|YP_004303265.1| flagellar basal-body rod FlgG [polymorphum gilvum SL003B-26A1]
 gi|326412902|gb|ADZ69965.1| Flagellar basal-body rod FlgG [Polymorphum gilvum SL003B-26A1]
          Length = 259

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 24/43 (55%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV+ + E +D+    R Y  N + I+ + +M +TT ++
Sbjct: 216 YLEMSNVDAVSEISDLIAAQRAYEMNSRIIQAADEMYSTTTNI 258



 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + + HIA +G+  Q   +++IS N+AN RTTG       Y+R+   F+++++ +
Sbjct: 1  MKALHIAATGMKAQELNVEVISNNVANMRTTG-------YKRQRADFQDLLYQN 47


>gi|146296289|ref|YP_001180060.1| hypothetical protein Csac_1266 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409865|gb|ABP66869.1| protein of unknown function DUF1078 domain protein
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 484

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV++  E  DM  T R Y AN + I  S +++   +++ R
Sbjct: 437 SQGTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDLVNIKR 484



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 11/55 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M  + +S     + L     RM +I +NIAN  T G       ++   ++F  V 
Sbjct: 2  MRSMFSSI----TSLRAHQTRMDVIGDNIANVNTVG-------FKSSRVTFASVF 45


>gi|332305616|ref|YP_004433467.1| flagellar basal-body rod protein FlgF [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172945|gb|AEE22199.1| flagellar basal-body rod protein FlgF [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 247

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +FDP   V+  +G+++  NVN + E  DM    R Y   ++ +K++ D+ +    LLR
Sbjct: 190 QFDPT--VSIRNGMLEGSNVNPVEEMVDMISLQRHYEMQVKFMKEASDLDSRANQLLR 245


>gi|312135845|ref|YP_004003183.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
           OL]
 gi|311775896|gb|ADQ05383.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
           OL]
          Length = 489

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV++  E  DM  T R Y AN + I  S +++   +++ R
Sbjct: 442 SQGTLEMSNVDLAKEFTDMIVTQRGYQANARVITSSDEILQELVNIKR 489



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 11/55 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M  + +S     S L     RM +I +NIAN  T G       ++   ++F  V 
Sbjct: 2  MRSMFSSI----SALRAHQTRMDVIGDNIANVNTVG-------FKSSRVTFASVF 45


>gi|241589579|ref|YP_002979604.1| protein of unknown function DUF1078 domain protein [Ralstonia
           pickettii 12D]
 gi|240868291|gb|ACS65950.1| protein of unknown function DUF1078 domain protein [Ralstonia
           pickettii 12D]
          Length = 401

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++ VE  +M    R Y AN QTIK    ++ T + +
Sbjct: 359 VEQSNVDLSVELVNMIVAQRSYQANAQTIKTEDSLLQTLVSI 400



 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 31/108 (28%), Gaps = 16/108 (14%)

Query: 13  SGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           SGL   S  +  I  N+AN  T G         D Y  +++          GV V ++  
Sbjct: 8   SGLDAASKNLSSIGSNVANVNTVGYKKSTVQFGDVY-ARSLVGATDNQIGQGVSVTRVSQ 66

Query: 69  D--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              Q       +P     N  G  +           D       Y  N
Sbjct: 67  SFTQGNVTVTGNPLDIAINGMGFYR---------MVDSSSGQVSYTRN 105


>gi|89069818|ref|ZP_01157153.1| flagellar basal-body rod protein FlgG [Oceanicola granulosus
          HTCC2516]
 gi|89044619|gb|EAR50735.1| flagellar basal-body rod protein FlgG [Oceanicola granulosus
          HTCC2516]
          Length = 261

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R+++IS N+AN  TTG       Y  +   F ++
Sbjct: 1  MRALKIAATGMSAQQMRVEVISNNLANMNTTG-------YNARRAEFADL 43



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  +V+ + E  D+ E  R Y  N + I  +  M+  T+ 
Sbjct: 216 QGFLEDSSVDAVKEVTDLIEAQRGYELNSKVISAADQMLGATVQ 259


>gi|332799182|ref|YP_004460681.1| flagellar hook-basal body protein [Tepidanaerobacter sp. Re1]
 gi|332696917|gb|AEE91374.1| flagellar hook-basal body protein [Tepidanaerobacter sp. Re1]
          Length = 411

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A A G ++  NV++  E   M  T R + AN + I  S +M+   ++L R
Sbjct: 362 AIAPGYLEMSNVDLSEEFTQMIITQRGFQANSRIITTSDEMLQELVNLKR 411



 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  + +      +GL     +M +I  NIAN  T G       +++  ++F++ +  +
Sbjct: 1  MRSMFSGV----TGLRNHQVKMDVIGNNIANVNTVG-------FKKSRVTFQDTLSQT 47


>gi|291523980|emb|CBK89567.1| fagellar hook-basal body proteins [Eubacterium rectale DSM 17629]
          Length = 272

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV V  E  ++    R Y  N + I  +  M+ T  +L R
Sbjct: 226 TGYLEGSNVQVADEMVNLIVAQRAYELNSKAITTADSMLETANNLRR 272



 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + + A +G+  +   +  I+ N++N  TTG
Sbjct: 1  MMRALYTAATGMRAEQTNVDTIANNLSNVNTTG 33


>gi|304321121|ref|YP_003854764.1| flagellar hook-associated protein [Parvularcula bermudensis
          HTCC2503]
 gi|303300023|gb|ADM09622.1| flagellar hook-associated protein [Parvularcula bermudensis
          HTCC2503]
          Length = 481

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
            ++  IANSGLA  S R Q  + NIANA       G   Y R+ +   E + GS G+ V
Sbjct: 3  FSSALSIANSGLAAASIRAQTTASNIANA----TVEG---YSRRDVVLSERVVGSTGIGV 55

Query: 64 KKIGVDQSTFV 74
            +G ++ T  
Sbjct: 56 SVVGTERVTSP 66


>gi|313673416|ref|YP_004051527.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
           DSM 19672]
 gi|312940172|gb|ADR19364.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 822

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NV++  E   M    R Y  N + I  S +M+   L+L R
Sbjct: 775 QSGAVENSNVDIAQEFVTMITVQRGYQTNSRVITTSDEMLQELLNLKR 822



 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL+     M ++  N++N  T G       Y+   ++F+++M  +
Sbjct: 1  MLRSLYSAVSGLSQHQKAMDVLGNNVSNVNTVG-------YKASRLTFKDLMSQT 48


>gi|269836573|ref|YP_003318801.1| hypothetical protein Sthe_0541 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785836|gb|ACZ37979.1| protein of unknown function DUF1078 domain protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 413

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A+G ++  NV++  E  +M    R + AN + +  S +++   ++L R
Sbjct: 366 AAGYLEMSNVDLAEEFTNMILAERGFQANSRVVTTSDEVLQDLVNLKR 413



 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          L  S   A SGL      + +I  NIAN      TPG   ++   + FE+VM
Sbjct: 2  LNRSMASAVSGLKAYQTWLDVIGNNIANL----ATPG---FKASRVRFEDVM 46


>gi|291528558|emb|CBK94144.1| fagellar hook-basal body proteins [Eubacterium rectale M104/1]
          Length = 272

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV V  E  ++    R Y  N + I  +  M+ T  +L R
Sbjct: 226 TGYLEGSNVQVADEMVNLIVAQRAYELNSKAITTADSMLETANNLRR 272



 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + + A +G+  +   +  I+ N++N  TTG
Sbjct: 1  MMRALYTAATGMRAEQTNVDTIANNLSNVNTTG 33


>gi|268316347|ref|YP_003290066.1| hypothetical protein Rmar_0780 [Rhodothermus marinus DSM 4252]
 gi|262333881|gb|ACY47678.1| protein of unknown function DUF1078 domain protein [Rhodothermus
           marinus DSM 4252]
          Length = 415

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E  DM  T R Y A+ + I  S +M+   + L R
Sbjct: 369 AGTLEMSNVDLATEFTDMIVTQRGYQASARIITTSDEMLQELVQLKR 415



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S     SGL     RM +IS NIAN  TT        ++R   +F E++  +
Sbjct: 1  MIRSLRTGVSGLKSHQVRMDVISNNIANVNTTA-------FKRGRAAFNELLGQT 48


>gi|34498340|ref|NP_902555.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472]
 gi|34104194|gb|AAQ60553.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472]
          Length = 416

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G V+  NVN+  E  +M    R Y AN QTIK    ++ T L++
Sbjct: 372 AGSVEDSNVNLTNELVNMITAQRYYQANAQTIKTQDTLIQTLLNI 416



 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 7/64 (10%)

Query: 13 SGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG-GVRVKKIG 67
          SG+   S ++  I  N+ANA T G     T   D Y      F    +  G GV V  + 
Sbjct: 8  SGINAASVQLDSIGNNVANANTVGFKSSRTEFGDLYA--QSIFGTAANSPGNGVSVLAVT 65

Query: 68 VDQS 71
           + S
Sbjct: 66 ANMS 69


>gi|85710166|ref|ZP_01041231.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
 gi|85688876|gb|EAQ28880.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
          Length = 263

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G+++  NVNV+ E  +M E  R Y  N + +    +M+   
Sbjct: 218 QGMLETSNVNVVEELVEMIEAQRAYEINSKMVSSVDEMLRNA 259



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 7/57 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           ++ H+A +GL  Q ARM++I+ N+AN  TTG       ++R    F  + +    V
Sbjct: 3  TSALHVARTGLEAQDARMRVIANNLANIGTTG-------FKRDRAEFATLAYQEMRV 52


>gi|253702432|ref|YP_003023621.1| flagellar basal body rod protein FlgG [Geobacter sp. M21]
 gi|251777282|gb|ACT19863.1| flagellar basal-body rod protein FlgG [Geobacter sp. M21]
          Length = 262

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV+++ E   M    R Y  N + I+ S +M+     L R
Sbjct: 215 EQGFLENSNVSIMEEMVSMIVGQRAYEINSKAIQASDEMLQQAAGLKR 262



 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I +   A SG+  Q   + +++ N+ANA TTG       +++    F+++M+ +
Sbjct: 1  MIRALWTAASGMQAQQLNIDVVAHNLANAATTG-------FKKSRADFQDLMYQT 48


>gi|146277706|ref|YP_001167865.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          ATCC 17025]
 gi|145555947|gb|ABP70560.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
          ATCC 17025]
          Length = 262

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 10/71 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
            + H+A +GL  Q  RMQ+IS N+AN  TTG       ++R   +FE +++ +   GG 
Sbjct: 3  TNAMHVAKTGLNAQQTRMQVISNNLANVNTTG-------FKRDRANFESLLYQTWKPGGA 55

Query: 62 RVKKIGVDQST 72
          +  +     S 
Sbjct: 56 QTSEATAMTSP 66



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 23/40 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ E  DM ET R Y  N ++I  S +MM 
Sbjct: 217 QGALESSNVNVVQELVDMIETQRAYEVNSKSISASDEMMQ 256


>gi|262173356|ref|ZP_06041033.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
 gi|261890714|gb|EEY36701.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
          Length = 250

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 204 KQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSATDDML 243



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 10/57 (17%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGVRVKKIGV 68
          +A Q  +M  IS N+AN  T G       ++R  + FE++        G +V ++  
Sbjct: 1  MAAQDTKMTAISNNLANVNTAG-------FKRDRVVFEDLFYNIQRQPGAQVDQVNE 50


>gi|269792757|ref|YP_003317661.1| flagellar basal-body rod protein FlgG [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100392|gb|ACZ19379.1| flagellar basal-body rod protein FlgG [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 262

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV V+ E  +M    R Y AN +TI  + +++    +L R
Sbjct: 220 EMANVQVVEEMVNMIVAQRAYEANSKTIATADELLRIANNLRR 262



 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +I S     +G+  Q   + ++S N+AN  T G       +++    F+++M+ 
Sbjct: 1  MIRSLWSGATGMIAQQTNLDVVSHNLANVNTAG-------FKKLRADFQDLMYQ 47


>gi|158321570|ref|YP_001514077.1| flagellar basal body rod protein [Alkaliphilus oremlandii OhILAs]
 gi|158141769|gb|ABW20081.1| flagellar basal body rod protein [Alkaliphilus oremlandii OhILAs]
          Length = 357

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  N++ + E   M  T R Y A+ + +K   +M+   + D+ +
Sbjct: 309 QGFLEGSNISTIDEMVKMISTMRSYEASSKMVKAYDEMLQKAVNDIGK 356



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +    + A S +      + I S N+AN  TTG
Sbjct: 1  MFRGLYTAVSSMQTNQRMLDITSNNMANVNTTG 33


>gi|39936961|ref|NP_949237.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           CGA009]
 gi|192292789|ref|YP_001993394.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           TIE-1]
 gi|39650818|emb|CAE29341.1| putative flagellar basal-body rod protein flgg (distal rod protein)
           [Rhodopseudomonas palustris CGA009]
 gi|192286538|gb|ACF02919.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           TIE-1]
          Length = 262

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV V+ E +D+    R Y  N + +  +  M+ +T ++ R
Sbjct: 220 EMANVEVVTEISDLISAQRAYEMNAKVVSSADQMLQSTSNMFR 262



 Score = 40.3 bits (94), Expect = 0.081,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 7/44 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          A +G+A Q   +Q+IS NIAN RTTG       ++++T  F+++
Sbjct: 7  AATGMAAQELNVQVISNNIANMRTTG-------FKKQTAQFQDL 43


>gi|317121822|ref|YP_004101825.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM
           12885]
 gi|315591802|gb|ADU51098.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM
           12885]
          Length = 406

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 361 GALEMSNVDLSREFVDMIVTQRGFQANSRVITTSDEMLQELVNLKR 406



 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L A      SGL     RM +I  NIAN  T G       ++   ++F+E+ + +
Sbjct: 2  MRSLYAGI----SGLQNHQLRMDVIGNNIANVNTVG-------FKSSRVTFKELFNQT 48


>gi|150020363|ref|YP_001305717.1| hypothetical protein Tmel_0465 [Thermosipho melanesiensis BI429]
 gi|149792884|gb|ABR30332.1| protein of unknown function DUF1078 domain protein [Thermosipho
           melanesiensis BI429]
          Length = 233

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G V+  NVN++ E   M E  R Y    + +    +++  +++
Sbjct: 184 QGYVEKSNVNIVREMVKMIEATRHYETLSKAVTVHDELLNKSIN 227



 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR----KTISFEEVMHGSGGVRVKKI 66
          A+ G+     ++  +S NI+N  T G    S  ++     +  SF  +      V VKKI
Sbjct: 8  ASMGMLADITKLDTLSNNISNVDTAGYKSDSLAFKAYFEKQLYSFNPMPQKE-EVEVKKI 66

Query: 67 G 67
          G
Sbjct: 67 G 67


>gi|118589981|ref|ZP_01547385.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
 gi|118437478|gb|EAV44115.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
          Length = 262

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 22/100 (22%)

Query: 27  ENIANARTTGDTP-GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
            N AN    G  P G + +R            + G  V  +  D    V           
Sbjct: 176 SNFAN--DVGLEPVGGNLFR---------ETEASGSPVSGVAGDPGFGVIR--------- 215

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+ + E   +    R Y  N + +K + +M 
Sbjct: 216 -QGYLESSNVDPVKEITALISAQRGYEMNSKVMKAADEMA 254



 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 11/71 (15%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
          + +  IA +G++ Q   +++++ NIAN  TT        ++R    F ++++ +    GV
Sbjct: 1  MKALAIAATGMSAQQMNVEVVANNIANMNTTS-------FKRSQAEFSDLLYQAERLQGV 53

Query: 62 RVKKIGVDQST 72
            +  G D   
Sbjct: 54 PNRG-GEDPVP 63


>gi|298507071|gb|ADI85794.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
          KN400]
          Length = 477

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +++   IA SG+  Q   +++ SENI N  T G +  +  +   T+S E       GVRV
Sbjct: 3  ILSLLDIAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFPLGNGVRV 62

Query: 64 KKIGV 68
           +I  
Sbjct: 63 AEIQR 67


>gi|241766736|ref|ZP_04764570.1| flagellar basal body rod protein [Acidovorax delafieldii 2AN]
 gi|241362905|gb|EER58629.1| flagellar basal body rod protein [Acidovorax delafieldii 2AN]
          Length = 101

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 29/117 (24%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           GL     R+   + N+AN  T+G       YRR+ ++ +    G+ GVR           
Sbjct: 11  GLQAAQLRLDASANNVANMNTSG-------YRREAVAQQADADGA-GVRATLQRE----- 57

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                      +A G      V +  E  +       + ANLQT+K    MM + LD
Sbjct: 58  ----------QDAKG------VALEQEAVEQISATYAFKANLQTLKTQDAMMGSLLD 98


>gi|119477951|ref|ZP_01618051.1| Flagellar basal body rod protein [marine gamma proteobacterium
          HTCC2143]
 gi|119448864|gb|EAW30106.1| Flagellar basal body rod protein [marine gamma proteobacterium
          HTCC2143]
          Length = 261

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +  +  I+ +GL+ Q  R+  IS N+ANA T G       Y+R ++ FE++++ 
Sbjct: 1  MNQALWISKTGLSAQDTRLATISNNLANAATVG-------YKRDSVVFEDLLYQ 47



 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV+V+ E   M  T R Y  N + I  +  M+ 
Sbjct: 215 EQGALENSNVDVVEELVSMITTQRTYEMNSKVISTADQMLQ 255


>gi|91776311|ref|YP_546067.1| flagellar basal-body rod FlgG [Methylobacillus flagellatus KT]
 gi|91710298|gb|ABE50226.1| Flagellar basal-body rod FlgG [Methylobacillus flagellatus KT]
          Length = 261

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVNV  E   M +T R Y  N + I  S  M+     L
Sbjct: 219 YLETSNVNVAEELVSMIQTQRAYEINSKAISTSDQMLQRLSQL 261



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q  +M +I+ N+AN  T G       +++    FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQMQMDVIANNLANVSTNG-------FKKTRAVFEDLLYQN 48


>gi|168335334|ref|ZP_02693430.1| Flagellar basal body and hook proteins [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 256

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN +    DM   +R Y AN + ++   +++   ++
Sbjct: 207 EQGYLESSNVNPVNAMVDMISVSRAYEANQRMVQIHDELVGRAVN 251



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          ++   + A +G+ VQ+ RM +IS ++AN+ TT        YR+     E 
Sbjct: 1  MVRGLYTAATGMQVQTRRMDVISNDLANSNTTA-------YRKDYAVVEA 43


>gi|39998134|ref|NP_954085.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
          PCA]
 gi|39985080|gb|AAR36435.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
          PCA]
          Length = 477

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +++   IA SG+  Q   +++ SENI N  T G +  +  +   T+S E       GVRV
Sbjct: 3  ILSLLDIAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFPLGNGVRV 62

Query: 64 KKIGV 68
           +I  
Sbjct: 63 AEIQR 67


>gi|126176156|ref|YP_001052305.1| flagellar hook protein FlgE [Shewanella baltica OS155]
 gi|304412508|ref|ZP_07394114.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|307307167|ref|ZP_07586905.1| fagellar hook-basal body protein [Shewanella baltica BA175]
 gi|125999361|gb|ABN63436.1| flagellar basal body FlaE domain protein [Shewanella baltica OS155]
 gi|304349150|gb|EFM13562.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|306910406|gb|EFN40837.1| fagellar hook-basal body protein [Shewanella baltica BA175]
          Length = 395

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV+   E  ++    R Y +N + +  +  M    L+
Sbjct: 352 YLEGSNVDTTAEMVNLMSAQRNYQSNAKVLDVNSTMQQALLN 393



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 9/61 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T+G       +R     F  + +G  +GGV V 
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANASTSG-------FRGGRSEFASIYNGGQAGGVGVM 54

Query: 65 K 65
           
Sbjct: 55 S 55


>gi|315122284|ref|YP_004062773.1| flagellar hook protein FlgE [Candidatus Liberibacter solanacearum
          CLso-ZC1]
 gi|313495686|gb|ADR52285.1| flagellar hook protein FlgE [Candidatus Liberibacter solanacearum
          CLso-ZC1]
          Length = 422

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 14/69 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          ++ +   A SG+  QS R+  +S+NIAN  T G       Y+R  +SF  ++       H
Sbjct: 3  ILGTMKTAMSGMDAQSNRVSAVSDNIANVNTIG-------YKRTAVSFSSLVFPPAAGCH 55

Query: 57 GSGGVRVKK 65
           SGGV V +
Sbjct: 56 TSGGVAVSE 64



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 9/71 (12%)

Query: 68  VDQSTFVEEFDPGHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            D       + PG+   +  G V     +  NV++  E  ++ E  R Y AN +  +   
Sbjct: 356 RDSGDISIGY-PGN---DQRGDVLSGALETANVDIANELTELIEAQRNYAANSKVFQTGS 411

Query: 123 DMMTTTLDLLR 133
           D M   + L R
Sbjct: 412 DFMDILISLKR 422


>gi|255261552|ref|ZP_05340894.1| flagellar basal-body rod protein FlgG [Thalassiobium sp. R2A62]
 gi|255103887|gb|EET46561.1| flagellar basal-body rod protein FlgG [Thalassiobium sp. R2A62]
          Length = 261

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G+A Q  R+++IS N+AN  TTG       Y  +   F ++
Sbjct: 1  MRALQIAATGMAAQQMRVEVISNNLANMNTTG-------YNARRAEFADL 43



 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  +V+ + E  D+ E  R Y  N + I  +  M+++ + +
Sbjct: 216 QGYLEDSSVDPVKEVTDLIEAQRGYELNSKVITAADQMLSSMVQI 260


>gi|257866386|ref|ZP_05646039.1| flagellar hook protein [Enterococcus casseliflavus EC30]
 gi|257873098|ref|ZP_05652751.1| flagellar hook protein [Enterococcus casseliflavus EC10]
 gi|257875999|ref|ZP_05655652.1| flagellar hook protein [Enterococcus casseliflavus EC20]
 gi|257800344|gb|EEV29372.1| flagellar hook protein [Enterococcus casseliflavus EC30]
 gi|257807262|gb|EEV36084.1| flagellar hook protein [Enterococcus casseliflavus EC10]
 gi|257810165|gb|EEV38985.1| flagellar hook protein [Enterococcus casseliflavus EC20]
          Length = 312

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 66  IGVDQSTFVEEFDPGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           I    S       PG+  A    +G ++  NV++  E  +M   +R Y AN ++I  S +
Sbjct: 243 IQTSNSGNPIVAGPGNNGAGTLQAGALEMSNVDLSTEFTEMIIASRAYQANSRSITTSDE 302

Query: 124 MMTTTLDLLR 133
           M+   L+L R
Sbjct: 303 MLQELLNLKR 312



 Score = 37.2 bits (86), Expect = 0.84,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SG+     +M ++S NIAN  T G       ++   + F+++M  +
Sbjct: 15 MLRSLYSGVSGMKNLQTKMDVVSNNIANVNTVG-------FKSSRVLFQDMMSQT 62


>gi|301168104|emb|CBW27690.1| putative flagellar hook protein [Bacteriovorax marinus SJ]
          Length = 426

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   +    R + AN +T+  + +M+   L++ R
Sbjct: 383 IELSNVDIANEFVGLMTAQRNFQANAKTLTTADEMLQQVLNIKR 426



 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANART 34
          ++ S +I  +GL      M +I +NIANA T
Sbjct: 3  ILRSFNIGVTGLNAVGQGMGVIGDNIANAGT 33


>gi|224372657|ref|YP_002607029.1| flagellar basal body rod protein FlgG [Nautilia profundicola AmH]
 gi|223588586|gb|ACM92322.1| flagellar basal-body rod protein FlgG [Nautilia profundicola AmH]
          Length = 262

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NV ++ E  D+    R Y A  + I  S +M+ T  +L R
Sbjct: 216 QGFVEMSNVQLVEEMTDLITGQRAYDAASKAIVTSDEMLQTVNNLKR 262



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A +G+  Q  ++ ++S NI+N  T G       Y+++   F ++ + +
Sbjct: 1  MVRSLYTAATGMMAQQMQIDVVSNNISNVNTIG-------YKKQRAEFADLFYQT 48


>gi|126738578|ref|ZP_01754283.1| flagellar basal-body rod protein FlgG [Roseobacter sp. SK209-2-6]
 gi|126720377|gb|EBA17083.1| flagellar basal-body rod protein FlgG [Roseobacter sp. SK209-2-6]
          Length = 261

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R++ IS N+AN  TT        Y  +   F ++
Sbjct: 1  MRALKIAATGMSAQQLRVETISNNLANMNTTA-------YNARRAEFADL 43



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  ++ E  R Y  N + I     MM  T
Sbjct: 216 QGYLEGSSVDSVREVTELIEAQRGYEMNAKVISAVDQMMGAT 257


>gi|302874597|ref|YP_003843230.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
 gi|307690792|ref|ZP_07633238.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
 gi|302577454|gb|ADL51466.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
          Length = 474

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+V+  NV++  +  +M   +R + AN + I  S +++   + L R
Sbjct: 428 NGVVEMSNVDLAEQFTEMIVASRAFQANSKIITTSDEILQELVQLKR 474



 Score = 34.9 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          +GL     ++ +I  NIAN  TT 
Sbjct: 10 TGLKANQTKLDVIGNNIANVGTTA 33


>gi|49082998|gb|AAT50899.1| PA1082 [synthetic construct]
          Length = 262

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NVNV+ E  +M  T R Y  N + I  +  M++
Sbjct: 222 SNVNVVEELVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 45.3 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++++  ++ +GL+ Q   +  IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MLSALWVSKTGLSAQGMNLTTISNNLANVSTTG-------FKRDRAEFQDLLYQ 47


>gi|89068731|ref|ZP_01156117.1| hypothetical protein OG2516_06821 [Oceanicola granulosus HTCC2516]
 gi|89045694|gb|EAR51756.1| hypothetical protein OG2516_06821 [Oceanicola granulosus HTCC2516]
          Length = 261

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NVN++ +  D+    R Y  N + I+ +  MM T 
Sbjct: 216 QGHLEGSNVNIIQQITDLIAAQRAYEMNSKAIETADQMMNTA 257



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 20/32 (62%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
          + +  IA +G+  Q   + +IS NIANA TTG
Sbjct: 1  MKALGIATTGMLAQQTNVDVISNNIANANTTG 32


>gi|167574701|ref|ZP_02367575.1| flagellar hook protein flgE [Burkholderia oklahomensis C6786]
          Length = 395

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  N +V  E  DM    R Y AN + I   + MM + +  L
Sbjct: 354 EMSNADVTRELVDMMSAQRNYQANSKVIATENQMMQSLMQAL 395



 Score = 34.5 bits (79), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +IA SG+   + ++  IS NIAN  T G
Sbjct: 2  SFNIALSGINAVNNQLNTISHNIANTGTYG 31


>gi|197120123|ref|YP_002140550.1| flagellar basal body rod protein FlgG [Geobacter bemidjiensis Bem]
 gi|197089483|gb|ACH40754.1| flagellar basal body rod protein FlgG [Geobacter bemidjiensis Bem]
          Length = 262

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV+++ E   M    R Y  N + I+ S +M+     L R
Sbjct: 215 EQGFLENSNVSIMEEMVSMIVGQRAYEINSKAIQASDEMLQQAAGLKR 262



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I +   A SG+  Q   + +++ N+ANA TTG       +++    F+++M+ +
Sbjct: 1  MIRALWTAASGMQAQQLNIDVVANNLANAATTG-------FKKSRADFQDLMYQT 48


>gi|326792666|ref|YP_004310487.1| flagellar basal-body rod protein FlgF [Clostridium lentocellum DSM
           5427]
 gi|326543430|gb|ADZ85289.1| flagellar basal-body rod protein FlgF [Clostridium lentocellum DSM
           5427]
          Length = 255

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NVN +    DM   +R Y  N + I+    ++   + +L R
Sbjct: 207 QGYLESANVNPVTAMVDMITVSRAYETNQKMIQVQDSLLGKAVNELGR 254



 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 10/55 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---FEEVM 55
          ++   + A +G+ VQ+ R++IIS ++AN  TTG       Y++       F+EV+
Sbjct: 1  MVRGLYTAATGMNVQAKRLEIISNDLANTTTTG-------YKKDVAVVSSFQEVL 48


>gi|167628969|ref|YP_001679468.1| flagellar basal-body rod protein flgg, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167591709|gb|ABZ83457.1| flagellar basal-body rod protein flgg, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 258

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V+ E   M    R Y  N + I+ + +M+    +L R
Sbjct: 214 YLESSNVQVVDEMVAMITAQRAYEVNTKAIQTADEMLGQANNLKR 258



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 43/114 (37%), Gaps = 26/114 (22%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           ++ + + + +G+  Q   M  IS N+AN  T G       Y++    F+++++ +     
Sbjct: 1   MMRALYSSATGMIAQQLNMDTISNNLANVNTNG-------YKKSRAEFQDLLYSTIRTAT 53

Query: 59  ----------GGVRVKKI--GVDQSTFVEEFDPGHPVANASGIVKY--PNVNVL 98
                      GVR   I   +     V+  +P        G  +   PN + +
Sbjct: 54  AQVPTGMQVGAGVRPSSITTIISSGNMVQTDNPYDLAITGEGYFRLINPNNDAV 107


>gi|222147571|ref|YP_002548528.1| flagellar basal-body rod protein [Agrobacterium vitis S4]
 gi|221734559|gb|ACM35522.1| flagellar basal-body rod protein [Agrobacterium vitis S4]
          Length = 263

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV+ + E   +    R Y  N + I  + +M  
Sbjct: 216 KQGYLESSNVDSVTEITSLISAQRAYEMNSKVITTADEMAQ 256



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 21/32 (65%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
          + +  IA++G+  Q   +++IS NIAN  TTG
Sbjct: 1  MRALAIASTGMNAQQTNLEVISNNIANINTTG 32


>gi|254463756|ref|ZP_05077167.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
          Y4I]
 gi|206684664|gb|EDZ45146.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
          Y4I]
          Length = 261

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R++ IS N+AN  TT        Y  +   F ++
Sbjct: 1  MRALKIAATGMSAQQLRVETISNNLANMNTTA-------YNARRAEFADL 43



 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  ++ E  R Y  N + I     MM  T
Sbjct: 216 QGYLEGSSVDAVREVTELIEAQRGYEMNAKVISAVDQMMGAT 257


>gi|302872713|ref|YP_003841349.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575572|gb|ADL43363.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 255

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NVN + E  +M    R Y AN +      + +   + ++ R
Sbjct: 207 QGYLEGSNVNSVQEMVNMINVLRAYEANQKAFTIQDETLQKAVSEIAR 254



 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I   + + SG+ +    M I + N+AN  TTG
Sbjct: 1  MIRGIYTSASGMILNQKLMDITANNVANVNTTG 33


>gi|167567750|ref|ZP_02360666.1| flagellar hook protein flgE [Burkholderia oklahomensis EO147]
          Length = 395

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  N +V  E  DM    R Y AN + I   + MM + +  L
Sbjct: 354 EMSNADVTRELVDMMSAQRNYQANSKVIATENQMMQSLMQAL 395



 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +IA SG+   + ++  IS NIAN  T G
Sbjct: 2  SFNIALSGINAVNNQLNTISHNIANTGTYG 31


>gi|83312594|ref|YP_422858.1| flagellar basal body rod protein FlgG [Magnetospirillum magneticum
           AMB-1]
 gi|82947435|dbj|BAE52299.1| Flagellar basal body rod protein [Magnetospirillum magneticum
           AMB-1]
          Length = 261

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ E  ++    R Y  N + I+ S +M++
Sbjct: 216 QGFLETSNVNVVAEVTNLIGAQRAYEMNSKVIQASDEMLS 255



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + S +IA +G+  Q   +++IS NIAN  TT  T       R+   F ++++ +
Sbjct: 1  MRSLNIAATGMLAQQTNVEVISNNIANMNTTAFT-------RRRPEFADLLYQN 47


>gi|304321133|ref|YP_003854776.1| flagellar basal-body rod protein FlgG [Parvularcula bermudensis
           HTCC2503]
 gi|303300035|gb|ADM09634.1| flagellar basal-body rod protein FlgG [Parvularcula bermudensis
           HTCC2503]
          Length = 251

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++   V+V+ E AD+ E  R Y  N + +  + +M  +   +
Sbjct: 206 QGYLEESGVDVVSEIADLIEAQRGYELNSKVLTAADEMYASATRI 250



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          +A Q  R+ +I+ NIAN  TT        Y  ++  F ++
Sbjct: 1  MAAQQTRVDVIANNIANMSTTA-------YAARSAVFADL 33


>gi|146295640|ref|YP_001179411.1| flagellar basal body rod protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409216|gb|ABP66220.1| flagellar basal body rod protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 257

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NVN + E  +M    R Y AN +      + +   + ++ R
Sbjct: 209 QGYLEGSNVNSVQEMVNMINVLRAYEANQKAFIAQDETLQKAVNEIAR 256



 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I   + + SG+ +    M + + NIAN  TTG
Sbjct: 1  MIRGIYTSASGMILNQKLMDLTANNIANVSTTG 33


>gi|257871297|ref|ZP_05650950.1| flagellar hook protein [Enterococcus gallinarum EG2]
 gi|257805461|gb|EEV34283.1| flagellar hook protein [Enterococcus gallinarum EG2]
          Length = 312

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV++  E  +M   +R Y AN ++I  S +M+   L+L R
Sbjct: 265 QAGALEMSNVDLSTEFTEMIIASRAYQANSRSITTSDEMLQELLNLKR 312



 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SG+     +M ++S NIAN  T G       ++   + F+++M  +
Sbjct: 15 MLRSLYSGVSGMKNLQTKMDVVSNNIANVNTVG-------FKSSRVLFQDMMSQT 62


>gi|224532206|ref|ZP_03672838.1| flagellar hook-basal body complex protein [Borrelia valaisiana
           VS116]
 gi|224511671|gb|EEF82077.1| flagellar hook-basal body complex protein [Borrelia valaisiana
           VS116]
          Length = 282

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +  NVN + E   M E NR Y AN +TI+   +++   + ++ +
Sbjct: 238 EASNVNPVKEMVLMIEINRAYEANQKTIQTEDNLLGKLINEIGK 281



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 11 ANSGLAVQSARMQIISENIANARTTG 36
          A SG+  +  ++ ++S N+AN    G
Sbjct: 8  AASGMMAERRKLDVVSNNLANIDLVG 33


>gi|300693338|ref|YP_003749311.1| flagellar hook protein flge [Ralstonia solanacearum PSI07]
 gi|299075375|emb|CBJ34670.1| flagellar hook protein FlgE [Ralstonia solanacearum PSI07]
          Length = 401

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R Y AN QTIK    ++ T + +
Sbjct: 359 VEQSNVDLSAELVNMIVAQRSYQANAQTIKTEDQLLQTLVSM 400



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 34/108 (31%), Gaps = 16/108 (14%)

Query: 13  SGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           SGL   S  + +I  N+ANA T G         D Y  +++          GV V K+  
Sbjct: 8   SGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVY-ARSLVGASDNQIGQGVDVTKVSQ 66

Query: 69  D--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              Q       +P     N +G  +           D       Y  N
Sbjct: 67  SFTQGNVTVTGNPLDIAINGTGFYR---------MVDASSGQVSYTRN 105


>gi|258592560|emb|CBE68869.1| Flagellar basal-body rod protein flgG (Distal rod protein) [NC10
           bacterium 'Dutch sediment']
          Length = 262

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E  ++  + R Y A  + ++ + +M+  + ++ R
Sbjct: 216 QGFLELSNVKVVEEMVNLIMSQRAYEAGSKAVQAADEMLQVSNNIRR 262



 Score = 42.2 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I +   A +G+  Q   +  I+ N+AN  TTG       ++R  + F+++ + +
Sbjct: 1  MIRALFSAVAGMQAQQLNLDNIANNLANVNTTG-------FKRSRLDFQDLFYQT 48


>gi|2275161|gb|AAB81413.1| FlgG [Sinorhizobium meliloti]
          Length = 262

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       Y+R    F ++++ +
Sbjct: 1  MKALSIAATGMNAQQLNLEVIANNIANINTTG-------YKRARAEFSDLLYQT 47



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            ++  NV+ + E  D+    R Y  N + I+ + +M 
Sbjct: 218 YLESSNVDPVKEITDLISAQRAYEMNSKIIQAADEMA 254


>gi|319765009|ref|YP_004128946.1| flagellar basal body rod protein [Alicycliphilus denitrificans BC]
 gi|330827204|ref|YP_004390507.1| flagellar basal body rod protein [Alicycliphilus denitrificans
           K601]
 gi|317119570|gb|ADV02059.1| flagellar basal body rod protein [Alicycliphilus denitrificans BC]
 gi|329312576|gb|AEB86991.1| flagellar basal body rod protein [Alicycliphilus denitrificans
           K601]
          Length = 107

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 30/130 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +   A IA SGL     R+   + N+AN           P   +    ++     GG
Sbjct: 5   MGTMTPLASIARSGLQAAQLRLDSSAHNVANL--------GTPGFARQAVDQQAAPAQGG 56

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+ +                      +G    P V +  E  +       + A+L  ++ 
Sbjct: 57  VQAR----------------------TGRFGQPGVALEAEAVEQMAATYAFKASLLVLRT 94

Query: 121 SHDMMTTTLD 130
           + +M  + LD
Sbjct: 95  ADEMAGSLLD 104


>gi|203288201|ref|YP_002223216.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
 gi|201085421|gb|ACH94995.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
          Length = 265

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G+++  NV +  E   M    R Y  N + I  S +M+
Sbjct: 217 KQGMLEMSNVAIAEEMVTMIVAQRAYEINSKAIHTSDNML 256



 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   + SG+  Q   +  I+ N++N  T G
Sbjct: 1  MMRALWTSASGMKAQQYNVDTIANNLSNVNTIG 33


>gi|46578927|ref|YP_009735.1| flagellar basal-body rod protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603472|ref|YP_967872.1| hypothetical protein Dvul_2429 [Desulfovibrio vulgaris DP4]
 gi|46448339|gb|AAS94994.1| flagellar basal-body rod protein, putative [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|120563701|gb|ABM29445.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris DP4]
 gi|311232785|gb|ADP85639.1| flagellar basal-body rod protein FlgF [Desulfovibrio vulgaris RCH1]
          Length = 260

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 79  PGHPVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           P  P    + G ++  NV V+ E  +M ET R + A  + ++ S  +    +  + R
Sbjct: 202 PVGPDVIVSQGYIETSNVEVVNEMVNMIETQRQFEAYQKVMQTSDTVDRDAITKIGR 258


>gi|146294550|ref|YP_001184974.1| flagellar hook protein FlgE [Shewanella putrefaciens CN-32]
 gi|145566240|gb|ABP77175.1| flagellar basal body FlaE domain protein [Shewanella putrefaciens
           CN-32]
          Length = 395

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV+   E  ++    R Y +N + +  +  M    L+
Sbjct: 352 YLEGSNVDTTAEMVNLMSAQRNYQSNAKVLDVNSTMQQALLN 393



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 9/61 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G       +R     F  + +G  +GGV V 
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANASTNG-------FRGGRSEFASIYNGGQAGGVSVM 54

Query: 65 K 65
           
Sbjct: 55 S 55


>gi|254477684|ref|ZP_05091070.1| flagellar basal-body rod protein FlgG [Ruegeria sp. R11]
 gi|214031927|gb|EEB72762.1| flagellar basal-body rod protein FlgG [Ruegeria sp. R11]
          Length = 261

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G+  Q  R++ IS N+AN  TTG       Y  +   F ++
Sbjct: 1  MRALKIAATGMTAQQLRVETISNNLANMNTTG-------YNARRAEFADL 43



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  ++ E  R Y  N + I     MM  T
Sbjct: 216 QGYLEASSVDAVREVTELIEAQRGYEMNAKVISAVDQMMGAT 257


>gi|169831903|ref|YP_001717885.1| hypothetical protein Daud_1757 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638747|gb|ACA60253.1| protein of unknown function DUF1078 domain protein [Candidatus
           Desulforudis audaxviator MP104C]
          Length = 310

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E A+M  T R + AN + I  S +M+   ++L R
Sbjct: 264 SGALEMSNVDLSAEFANMITTQRGFQANARVITVSDEMLQELINLKR 310



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 8/67 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-HGSGGVR 62
          +I S     SGL     RM +I+ NIAN  TT        ++   ++F+E++     G  
Sbjct: 1  MIRSLTSGVSGLRNHQVRMDVIANNIANVNTTA-------FKAGRVNFQEILSQNIRGTS 53

Query: 63 VKKIGVD 69
             IGVD
Sbjct: 54 ASTIGVD 60


>gi|120554035|ref|YP_958386.1| flagellar basal body rod protein FlgG [Marinobacter aquaeolei VT8]
 gi|120323884|gb|ABM18199.1| flagellar basal-body rod protein FlgG [Marinobacter aquaeolei VT8]
          Length = 262

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV V+ E  +M  T R Y  N + +  +  M+ 
Sbjct: 215 EQGSLEASNVEVVEELVNMITTQRAYEMNSKVVSTADQMLQ 255



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 10/57 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          M+    +  ++ +GL+ Q   M  IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MNP---ALWVSKTGLSAQDINMSTISNNLANVNTTG-------FKRDKAVFQDLLYQ 47


>gi|307718606|ref|YP_003874138.1| flagellar hook protein [Spirochaeta thermophila DSM 6192]
 gi|306532331|gb|ADN01865.1| flagellar hook protein [Spirochaeta thermophila DSM 6192]
          Length = 462

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++     DM  T R + AN +TI  S  M+   L L R
Sbjct: 416 AGALEMSNVDLAEAFTDMIVTQRGFQANSRTITTSDQMLQELLTLKR 462



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S +   SGL     RM +I  NI+N  TTG
Sbjct: 1  MMRSLYAGVSGLQNHQIRMDVIGNNISNVNTTG 33


>gi|259417939|ref|ZP_05741858.1| flagellar basal-body rod protein FlgG [Silicibacter sp.
          TrichCH4B]
 gi|259346845|gb|EEW58659.1| flagellar basal-body rod protein FlgG [Silicibacter sp.
          TrichCH4B]
          Length = 261

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R++ IS N+AN  TT        Y  +   F ++
Sbjct: 1  MRALKIAATGMSAQQLRVETISNNLANMNTTA-------YNARRAEFADL 43



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 78  DPGHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +   P A+  G      ++  +V+ + E  ++ E  R Y  N + I     MM+ T
Sbjct: 202 NTTEPGADGVGTLRQKYLEDSSVDAVREITELIEAQRGYEMNSKVISAVDQMMSAT 257


>gi|220932495|ref|YP_002509403.1| flagellar basal body rod protein [Halothermothrix orenii H 168]
 gi|219993805|gb|ACL70408.1| flagellar basal body rod protein [Halothermothrix orenii H 168]
          Length = 248

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN++ E   M E NR +  N + IK +   ++  ++
Sbjct: 198 KQGYLETSNVNIVKEMVRMIEVNRAFEVNQKVIKNADQTLSKAVN 242



 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 29/111 (26%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK---TISF--------- 51
           +I   + A S +     +M++++ N+AN  T G       Y+R     +SF         
Sbjct: 1   MIKGIYTAASSMVTNQRKMKLVANNLANVNTAG-------YKRDEGIQVSFPEVFISRLE 53

Query: 52  --EEVMHGSGGVRVKKIGVDQSTFVEEF-----DPGHPVANASGI--VKYP 93
             +    G  G  VK I  D + F E       +P     + +G   V+ P
Sbjct: 54  KGQATPLGELGTGVK-IEEDYTDFREGQMNHTGNPLDVAIDGNGFFVVETP 103


>gi|83747654|ref|ZP_00944690.1| FlgE [Ralstonia solanacearum UW551]
 gi|207728346|ref|YP_002256740.1| flagellar hook protein flge [Ralstonia solanacearum MolK2]
 gi|207739737|ref|YP_002258130.1| flagellar hook protein flge [Ralstonia solanacearum IPO1609]
 gi|83725706|gb|EAP72848.1| FlgE [Ralstonia solanacearum UW551]
 gi|206591592|emb|CAQ57204.1| flagellar hook protein flge [Ralstonia solanacearum MolK2]
 gi|206593119|emb|CAQ60025.1| flagellar hook protein flge [Ralstonia solanacearum IPO1609]
          Length = 401

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R Y AN QTIK    ++ T + +
Sbjct: 359 VEQSNVDLSAELVNMIVAQRSYQANAQTIKTEDQLLQTLVSM 400



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 34/108 (31%), Gaps = 16/108 (14%)

Query: 13  SGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           SGL   S  + +I  N+ANA T G         D Y  +++          GV V K+  
Sbjct: 8   SGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVY-ARSLVGASDNQIGQGVDVTKVSQ 66

Query: 69  D--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              Q       +P     N +G  +           D       Y  N
Sbjct: 67  SFTQGNVTVTGNPLDIAINGTGFYR---------MVDTSSGQVSYTRN 105


>gi|150388210|ref|YP_001318259.1| hypothetical protein Amet_0370 [Alkaliphilus metalliredigens QYMF]
 gi|149948072|gb|ABR46600.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 264

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E   M    R Y  + +TI+ + +M+    +L R
Sbjct: 218 QGFLETSNVQIVDEMVKMITAQRAYETSSKTIQTADEMLGMANNLRR 264



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A SG+  Q   +  ++ N+AN  TT        Y+ +   F+++++ +
Sbjct: 7  AASGMKAQQLNIDTVANNMANVNTTA-------YKAQRTEFKDLLYAN 47


>gi|15964415|ref|NP_384768.1| flagellar basal body rod protein FlgG [Sinorhizobium meliloti
          1021]
 gi|307311557|ref|ZP_07591198.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti
          BL225C]
 gi|307318912|ref|ZP_07598343.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti
          AK83]
 gi|17380480|sp|Q52946|FLGG_RHIME RecName: Full=Flagellar basal-body rod protein flgG; AltName:
          Full=Distal rod protein
 gi|15073592|emb|CAC45234.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
 gi|306895326|gb|EFN26081.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti
          AK83]
 gi|306899574|gb|EFN30203.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti
          BL225C]
          Length = 262

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       Y+R    F ++++ +
Sbjct: 1  MKALSIAATGMNAQQLNLEVIANNIANINTTG-------YKRARAEFSDLLYQT 47



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            ++  NV+ + E  D+    R Y  N + I+ + +M 
Sbjct: 218 YLESSNVDPVKEITDLISAQRAYEMNSKIIQAADEMA 254


>gi|23015788|ref|ZP_00055555.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 261

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ E  ++    R Y  N + I+ S +M++
Sbjct: 216 QGFLETSNVNVVAEVTNLIGAQRAYEMNSKVIQASDEMLS 255



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + S +IA +G+  Q   +++IS NIAN  TT  T       R+   F ++++ +
Sbjct: 1  MRSLNIAATGMLAQQTNVEVISNNIANMNTTAFT-------RRRPEFADLLYQN 47


>gi|260768780|ref|ZP_05877714.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|260616810|gb|EEX41995.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|315180483|gb|ADT87397.1| hypothetical flagellar basal-body rod protein [Vibrio furnissii
           NCTC 11218]
          Length = 261

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV V+ E  DM  T R Y  + + +  +  M+ 
Sbjct: 215 KQGALETSNVQVVEEMVDMISTQRAYEMSAKMVSAADQMLQ 255



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +  +  I+ +G+A Q A+M  IS N+AN  T G       ++R  + FE++ + 
Sbjct: 1  MHNALMISKTGMAAQDAKMTAISNNLANVNTVG-------FKRDRVVFEDLFYS 47


>gi|15596279|ref|NP_249773.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa PAO1]
 gi|107100527|ref|ZP_01364445.1| hypothetical protein PaerPA_01001552 [Pseudomonas aeruginosa PACS2]
 gi|116049011|ref|YP_792187.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|152984786|ref|YP_001349648.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa PA7]
 gi|218892954|ref|YP_002441823.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa
           LESB58]
 gi|254234218|ref|ZP_04927541.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           C3719]
 gi|254239440|ref|ZP_04932762.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa 2192]
 gi|296390554|ref|ZP_06880029.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa PAb1]
 gi|313106037|ref|ZP_07792296.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           39016]
 gi|9946998|gb|AAG04471.1|AE004539_13 flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa PAO1]
 gi|115584232|gb|ABJ10247.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166149|gb|EAZ51660.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           C3719]
 gi|126192818|gb|EAZ56881.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa 2192]
 gi|150959944|gb|ABR81969.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa PA7]
 gi|218773182|emb|CAW28994.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           LESB58]
 gi|310878798|gb|EFQ37392.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           39016]
          Length = 261

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NVNV+ E  +M  T R Y  N + I  +  M++
Sbjct: 222 SNVNVVEELVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++++  ++ +GL+ Q   +  IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MLSALWVSKTGLSAQDMNLTTISNNLANVSTTG-------FKRDRAEFQDLLYQ 47


>gi|315186381|gb|EFU20141.1| fagellar hook-basal body protein [Spirochaeta thermophila DSM 6578]
          Length = 462

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++     DM  T R + AN +TI  S  M+   L L R
Sbjct: 416 AGALEMSNVDLAEAFTDMIVTQRGFQANSRTITTSDQMLQELLTLKR 462



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S +   SGL     RM +I  NI+N  TTG
Sbjct: 1  MMRSLYAGVSGLQNHQIRMDVIGNNISNVNTTG 33


>gi|294084416|ref|YP_003551174.1| flagellar basal-body rod protein FlgG [Candidatus
          Puniceispirillum marinum IMCC1322]
 gi|292663989|gb|ADE39090.1| flagellar basal-body rod protein FlgG [Candidatus
          Puniceispirillum marinum IMCC1322]
          Length = 262

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
           +S H+A +GL  Q  RMQ+I+ N+AN  TTG       ++R   +FE +++ 
Sbjct: 3  TSSMHVAKTGLNAQQTRMQVIANNLANVNTTG-------FKRDRANFETLLYQ 48



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ E  +M ET R Y  + ++I    +M+ 
Sbjct: 217 QGSLEASNVNVVQELVNMIETQRAYEVSSKSITSVDEMLR 256


>gi|120597305|ref|YP_961879.1| flagellar hook protein FlgE [Shewanella sp. W3-18-1]
 gi|120557398|gb|ABM23325.1| flagellar basal body FlaE domain protein [Shewanella sp. W3-18-1]
          Length = 395

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV+   E  ++    R Y +N + +  +  M    L+
Sbjct: 352 YLEGSNVDTTAEMVNLMSAQRNYQSNAKVLDVNSTMQQALLN 393



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 9/61 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G       +R     F  + +G  +GGV V 
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANASTNG-------FRGGRSEFASIYNGGQAGGVSVM 54

Query: 65 K 65
           
Sbjct: 55 S 55


>gi|220932517|ref|YP_002509425.1| flagellar hook protein FlgE, epsilon proteobacterial
           [Halothermothrix orenii H 168]
 gi|219993827|gb|ACL70430.1| flagellar hook protein FlgE, epsilon proteobacterial
           [Halothermothrix orenii H 168]
          Length = 519

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  +  DM  T R + AN + I  +  M+   ++L R
Sbjct: 474 GNLEMSNVDLAEQFTDMITTQRGFQANSKIITTTDQMLQDLVNLKR 519



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 18/75 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
          ++ S +   SGL     RM +I  NIAN  T G       Y+  +++F+E++        
Sbjct: 1  MMRSMYAGVSGLKAHQTRMDVIGNNIANVNTVG-------YKSSSVTFKEMLSQTLRGAK 53

Query: 57 ----GSGGVRVKKIG 67
              G GGV   ++G
Sbjct: 54 APQGGRGGVNPMQVG 68


>gi|88811803|ref|ZP_01127057.1| hypothetical protein NB231_05340 [Nitrococcus mobilis Nb-231]
 gi|88791194|gb|EAR22307.1| hypothetical protein NB231_05340 [Nitrococcus mobilis Nb-231]
          Length = 261

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 78  DPGHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            PG P  N  G+V+       NVN+  E  +M ET R +  N + I+ +  M+ 
Sbjct: 202 QPGTPGLNGLGLVQAGALESSNVNIAEELVNMIETQRGFETNTRAIQTADQMLQ 255



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 9/61 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK--TISFEEVMHGS 58
          M+    +  +A +GL  Q  RM  ++ N+AN  TTG        R K   + ++ V    
Sbjct: 1  MNP---ALWVAKTGLDAQQTRMSTVANNLANVNTTGFKKD----RAKFEDLVYQTVRQAG 53

Query: 59 G 59
          G
Sbjct: 54 G 54


>gi|83718065|ref|YP_438389.1| flagellar hook protein flgE [Burkholderia thailandensis E264]
 gi|167614837|ref|ZP_02383472.1| flagellar hook protein flgE [Burkholderia thailandensis Bt4]
 gi|257141422|ref|ZP_05589684.1| flagellar hook protein flgE [Burkholderia thailandensis E264]
 gi|83651890|gb|ABC35954.1| flagellar hook protein flgE [Burkholderia thailandensis E264]
          Length = 395

 Score = 54.2 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +G ++  N +V  E  DM    R Y AN + +   + MM   +  L
Sbjct: 350 AGSLELSNADVTKELVDMMSAQRNYQANSKVLSTENQMMQALMQAL 395



 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 9/68 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SG+   ++++  IS NIANA T G       ++    +F  ++ G  + G  + 
Sbjct: 2  SFNIALSGINAINSQLNTISHNIANANTYG-------FKAGRANFATMVAGTQANGTYIG 54

Query: 65 KIGVDQST 72
           I     T
Sbjct: 55 SITQSVGT 62


>gi|313901443|ref|ZP_07834901.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
 gi|313468293|gb|EFR63749.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
          Length = 406

 Score = 54.2 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 361 GALEMSNVDLSREFVDMIVTQRGFQANSRVITTSDEMLQELVNLKR 406



 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L A      SGL     RM +I  NIAN  T G       Y+   ++F+E+ + +
Sbjct: 2  MRSLYAGI----SGLQNHQLRMDVIGNNIANVNTVG-------YKSSRVTFKELFNQT 48


>gi|187918628|ref|YP_001884193.1| flagellar basal-body rod protein FlgF [Borrelia hermsii DAH]
 gi|119861476|gb|AAX17271.1| flagellar basal-body rod protein FlgF [Borrelia hermsii DAH]
          Length = 282

 Score = 54.2 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            +G ++  NVN + E   M   NR Y AN +TI+    ++   + ++ +
Sbjct: 233 ETGALEGSNVNAINEMVSMITVNRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 11 ANSGLAVQSARMQIISENIANAR 33
          A SG+  Q  R+ +IS N+AN  
Sbjct: 8  AASGMMAQRHRLDVISNNLANID 30


>gi|325567523|ref|ZP_08144190.1| flagellar hook-basal body protein [Enterococcus casseliflavus ATCC
           12755]
 gi|325158956|gb|EGC71102.1| flagellar hook-basal body protein [Enterococcus casseliflavus ATCC
           12755]
          Length = 298

 Score = 54.2 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV++  E  +M   +R Y AN ++I  S +M+   L+L R
Sbjct: 251 QAGALEMSNVDLSTEFTEMIIASRAYQANSRSITTSDEMLQELLNLKR 298



 Score = 37.2 bits (86), Expect = 0.84,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SG+     +M ++S NIAN  T G       ++   + F+++M  +
Sbjct: 1  MLRSLYSGVSGMKNLQTKMDVVSNNIANVNTVG-------FKSSRVLFQDMMSQT 48


>gi|300696913|ref|YP_003747574.1| flagellar hook protein FlgE [Ralstonia solanacearum CFBP2957]
 gi|299073637|emb|CBJ53157.1| flagellar hook protein FlgE [Ralstonia solanacearum CFBP2957]
          Length = 401

 Score = 54.2 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R Y AN QTIK    ++ T + +
Sbjct: 359 VEQSNVDLSAELVNMIVAQRSYQANAQTIKTEDQLLQTLVSM 400



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 34/108 (31%), Gaps = 16/108 (14%)

Query: 13  SGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           SGL   S  + +I  N+ANA T G         D Y  +++          GV V K+  
Sbjct: 8   SGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVY-ARSLVGASDNQIGQGVDVTKVSQ 66

Query: 69  D--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              Q       +P     N +G  +           D       Y  N
Sbjct: 67  SFTQGNVTVTGNPLDIAINGTGFYR---------MVDASSGQVSYTRN 105


>gi|1086561|gb|AAB68968.1| FlgG [Agrobacterium tumefaciens]
 gi|2459714|gb|AAB71790.1| FlgG [Agrobacterium tumefaciens]
          Length = 262

 Score = 54.2 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 5/50 (10%)

Query: 82  PVANASGIVK-----YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           P   + G VK       NV+ + E  D+    R Y  N + I  + +M +
Sbjct: 206 PDDPSYGYVKQSYLEGSNVDAVKEITDLITAQRAYEMNSKVITTADEMAS 255



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       Y+R    F ++++ +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTG-------YKRARAEFTDLLYQT 47


>gi|109899401|ref|YP_662656.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas atlantica
           T6c]
 gi|109701682|gb|ABG41602.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas atlantica
           T6c]
          Length = 247

 Score = 54.2 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +FDP   V+  +G+++  NVN + E  DM    R Y   ++ +K++ D+ +    LLR
Sbjct: 190 QFDPT--VSIRNGMLEGSNVNPVEEMVDMISLQRHYEMQIKFMKEASDLDSRANQLLR 245


>gi|57505521|ref|ZP_00371448.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
 gi|57016068|gb|EAL52855.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
          Length = 263

 Score = 54.2 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 10/77 (12%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  V  I                     G V+  NV ++ E  D+    R Y A  +
Sbjct: 197 GASGAPVAGIAGQDGLGNIRH----------GFVELSNVQLVEEMTDLITGQRAYEAGSK 246

Query: 117 TIKQSHDMMTTTLDLLR 133
            I  S +M+     L R
Sbjct: 247 AITTSDEMLGIVNQLKR 263



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 10/71 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S H A +G+  Q  ++ + S NI+N  T G       +++    F ++M+ +    G
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNISNVNTVG-------FKKSRAEFADLMYQTMKYAG 53

Query: 61 VRVKKIGVDQS 71
                 +  S
Sbjct: 54 TSTSATTLSPS 64


>gi|332530688|ref|ZP_08406619.1| flagellar basal body rod protein [Hylemonella gracilis ATCC 19624]
 gi|332039856|gb|EGI76251.1| flagellar basal body rod protein [Hylemonella gracilis ATCC 19624]
          Length = 101

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 32/126 (25%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++S  I  SGL     R+   + N+AN  T G       ++R+T++ ++  +   G R  
Sbjct: 5   LSSIGI--SGLQAAQLRLDSSAHNVANLNTPG-------FKRQTVTQQDAPN-LAGTR-T 53

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           ++G                A   G      V +  E  +    +  + ANLQT+K   DM
Sbjct: 54  RLGK---------------AREEG------VTLEGEVVEQMSASHAFKANLQTLKTQEDM 92

Query: 125 MTTTLD 130
           + + LD
Sbjct: 93  LGSLLD 98


>gi|170741836|ref|YP_001770491.1| flagellar basal body rod protein FlgG [Methylobacterium sp. 4-46]
 gi|168196110|gb|ACA18057.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46]
          Length = 262

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 21/99 (21%)

Query: 29  IAN-ARTTGDTP-GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA 86
           IAN A  +G  P G+  YR            + G  V  +  D                 
Sbjct: 175 IANFANESGLEPLGNGLYR---------ETAASGAPVTGVAGDTGFGKV----------Q 215

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NV+ + E   +    R +  N + I+ + +M 
Sbjct: 216 QGYLESSNVDPVKEITSLITAQRAFEMNSKVIQAADEMA 254



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 20/32 (62%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
          + +  IA +G+  Q   +++I+ N+AN  TTG
Sbjct: 1  MRALAIAATGMNAQQLNLEVIANNVANLNTTG 32


>gi|150395485|ref|YP_001325952.1| flagellar basal body rod protein FlgG [Sinorhizobium medicae
          WSM419]
 gi|150027000|gb|ABR59117.1| flagellar basal-body rod protein FlgG [Sinorhizobium medicae
          WSM419]
          Length = 262

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       Y+R    F ++++ +
Sbjct: 1  MKALSIAATGMNAQQLNLEVIANNIANINTTG-------YKRARAEFSDLLYQT 47



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            ++  NV+ + E  D+    R Y  N + I+ + +M 
Sbjct: 218 YLESSNVDPVKEITDLISAQRAYEMNSKIIQAADEMA 254


>gi|319405401|emb|CBI79020.1| Flagellar basal-body rod protein flgG [Bartonella sp. AR 15-3]
          Length = 264

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 79  PGHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           PG P  +  G     +++  NV+ + E  ++    R Y  N + I+ S +M 
Sbjct: 205 PGDPKEDGYGSIMQAMLETSNVDPVKEMTELIAAQRSYEMNSKVIQASDEMA 256



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 7/52 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + S  IA +G+A Q   + +I+ N+AN  TTG       ++R    F ++M+
Sbjct: 3  MKSLSIAATGMAAQQTNLDVIANNMANINTTG-------FKRGRAEFADLMY 47


>gi|163738060|ref|ZP_02145476.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
          BS107]
 gi|163742544|ref|ZP_02149930.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
          2.10]
 gi|161384129|gb|EDQ08512.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
          2.10]
 gi|161388676|gb|EDQ13029.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
          BS107]
          Length = 261

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G+  Q  R++ IS N+AN  TTG       Y  +   F ++
Sbjct: 1  MRALKIAATGMTAQQLRVETISNNLANMNTTG-------YNARRAEFADL 43



 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  ++ E  R Y  N + I     MM  T
Sbjct: 216 QGYLEASSVDAVREVTELIEAQRGYEMNAKVISAVDQMMGAT 257


>gi|304310887|ref|YP_003810485.1| Flagellar basal-body rod protein [gamma proteobacterium HdN1]
 gi|301796620|emb|CBL44832.1| Flagellar basal-body rod protein [gamma proteobacterium HdN1]
          Length = 261

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NVNV+ E  +M ET R Y  N + I     M++
Sbjct: 220 EASNVNVVEELVNMIETQRAYEMNSKVISTVDQMLS 255



 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + A+  I+ SGL+ Q  R+  IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MNAALWISKSGLSAQDLRLSTISNNLANVSTTG-------FKRDIAVFQDLLYQ 47


>gi|326202441|ref|ZP_08192310.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
 gi|325987559|gb|EGD48386.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
          Length = 265

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G  +  NVN++ E  DM    R Y AN + ++     +   ++
Sbjct: 216 QGYDELSNVNIIDEMVDMITVMRAYEANQKVLQAQDGTLDKAVN 259



 Score = 38.0 bits (88), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 7/84 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-------RKTISFEEVMH 56
          +I   + +   +     ++ +I+ N+AN  TT     +  Y+       R+    +   +
Sbjct: 1  MIRGLYTSAWSMLANQKKLDVITNNMANVNTTAYKKDTVVYQSFPEILTRRINDTQSPTN 60

Query: 57 GSGGVRVKKIGVDQSTFVEEFDPG 80
           S  V   ++  D       + PG
Sbjct: 61 PSAVVGSMELSSDVGEVYTYYTPG 84


>gi|70729006|ref|YP_258740.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens
           Pf-5]
 gi|68343305|gb|AAY90911.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens
           Pf-5]
          Length = 261

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV+ + E  +M  T R Y  N + I  +  M++
Sbjct: 220 EASNVSTVEEMVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFQDLLYQ 47


>gi|94986792|ref|YP_594725.1| flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
 gi|94731041|emb|CAJ54404.1| Flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
          Length = 502

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  +M    R +  N +++  +  M+   L+L R
Sbjct: 460 ETSNVDMSREMVNMIIIQRGFQMNSKSVTTADTMLQKALELKR 502



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S  I  +G+   S  +  +S NIANA T G       Y+++ + F+++ 
Sbjct: 1  MMGSLFIGATGMKTHSTGLGTVSNNIANANTIG-------YKQQQVVFQDLF 45


>gi|85712256|ref|ZP_01043307.1| Flagella basal body rod protein [Idiomarina baltica OS145]
 gi|85693883|gb|EAQ31830.1| Flagella basal body rod protein [Idiomarina baltica OS145]
          Length = 262

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G+++  NVNV  E  ++ E  R Y  N + I     M++
Sbjct: 217 QGMLETSNVNVTEELVNLIEAQRGYEMNSKVISSVDQMLS 256



 Score = 40.3 bits (94), Expect = 0.090,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 14/71 (19%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----H 56
          M+    +  I+ +GL  Q   + +IS N+ANA T G       +++    FE+++    +
Sbjct: 1  MNP---ALWISKTGLDAQQRDISVISNNLANASTVG-------FKKSRAIFEDLLYQNIN 50

Query: 57 GSGGVRVKKIG 67
            GG   + + 
Sbjct: 51 QPGGQSAQDVE 61


>gi|119953550|ref|YP_945760.1| flagellar basal-body rod protein FlgF [Borrelia turicatae 91E135]
 gi|119862321|gb|AAX18089.1| flagellar basal-body rod protein FlgF [Borrelia turicatae 91E135]
          Length = 286

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            +G ++  NVN + E   M   NR Y AN +TI+    ++   + ++ +
Sbjct: 237 ETGTLEGSNVNAINEMVSMITVNRAYEANQKTIQTEDSLLGKLINEIGK 285



 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 11 ANSGLAVQSARMQIISENIANARTTG 36
          A SG+  Q  R+ +I+ N+AN   TG
Sbjct: 12 AASGMMAQRHRLDVIANNLANIDLTG 37


>gi|315637964|ref|ZP_07893150.1| flagellar basal-body rod protein FlgG [Campylobacter upsaliensis
           JV21]
 gi|315481999|gb|EFU72617.1| flagellar basal-body rod protein FlgG [Campylobacter upsaliensis
           JV21]
          Length = 263

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 10/77 (12%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  V  I                     G V+  NV ++ E  D+    R Y A  +
Sbjct: 197 GASGAPVAGIAGQDGLGNIRH----------GFVELSNVQLVEEMTDLITGQRAYEAGSK 246

Query: 117 TIKQSHDMMTTTLDLLR 133
            I  S +M+     L R
Sbjct: 247 AITTSDEMLGIVNQLKR 263



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 10/71 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ S H A +G+  Q  ++ + S NI+N  T G       +++    F ++M+ +    G
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNISNVNTVG-------FKKSRAEFADLMYQTMKYAG 53

Query: 61 VRVKKIGVDQS 71
                 +  S
Sbjct: 54 TSTSATTLSPS 64


>gi|167576662|ref|ZP_02369536.1| flagellar hook protein flgE [Burkholderia thailandensis TXDOH]
          Length = 395

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +G ++  N +V  E  DM    R Y AN + +   + MM   +  L
Sbjct: 350 AGSLELSNADVTKELVDMMSAQRNYQANSKVLSTENQMMQALMQAL 395



 Score = 38.8 bits (90), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S +IA SG+   ++++  IS NIAN+ T G       ++    +F  ++ G+ 
Sbjct: 2  SFNIALSGINAINSQLNTISHNIANSNTYG-------FKAGRANFATMVAGTQ 47


>gi|20807880|ref|NP_623051.1| flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|254478868|ref|ZP_05092232.1| Flagellar basal body protein FlgE [Carboxydibrachium pacificum DSM
           12653]
 gi|20516445|gb|AAM24655.1| Flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|214035181|gb|EEB75891.1| Flagellar basal body protein FlgE [Carboxydibrachium pacificum DSM
           12653]
          Length = 415

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NVN+  E  DM  T R + AN + I  S +M+   +++ R
Sbjct: 370 GTLEMSNVNLANEFVDMITTQRGFQANAKVITVSDEMLQDLVNMKR 415



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL    AR+ +I  NIAN  T G       Y+   ++F+E+   +
Sbjct: 1  MLRSMYSAISGLQAHQARLDVIGNNIANVNTVG-------YKASRMTFKEIFSQT 48


>gi|203284668|ref|YP_002222408.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
 gi|201084111|gb|ACH93702.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
          Length = 265

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G+++  NV +  E   M    R Y  N + I  S +M+
Sbjct: 217 KQGMLEMSNVAIAEEMVTMIVAQRAYEINSKAIHTSDNML 256



 Score = 41.1 bits (96), Expect = 0.058,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   + SG+  Q   +  I+ N++N  T G
Sbjct: 1  MMRALWTSASGMKAQQYNVDTIANNLSNVNTIG 33


>gi|297617147|ref|YP_003702306.1| fagellar hook-basal body protein [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144984|gb|ADI01741.1| fagellar hook-basal body protein [Syntrophothermus lipocalidus DSM
           12680]
          Length = 487

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 442 GSLEMSNVDLSEEFTDMIVTQRGFQANSRIITTSDEMLQELVNLKR 487



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 16/96 (16%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S +   SGL     RM +I  NIAN  T G       Y++    F++  + +     
Sbjct: 1  MMRSMYAGVSGLRTHQLRMDVIGNNIANVNTVG-------YKKSRAIFKDAFYQA----- 48

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            I    +         +P A   G V+  +V+V+ 
Sbjct: 49 --IRGGSAPTGAR-GGTNPQAIGLG-VQLSSVDVIA 80


>gi|88799023|ref|ZP_01114604.1| Flagellar basal body rod protein [Reinekea sp. MED297]
 gi|88778250|gb|EAR09444.1| Flagellar basal body rod protein [Reinekea sp. MED297]
          Length = 261

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NV ++ E  DM  T R Y  N + +  +  M+
Sbjct: 216 QGALENSNVTIVEEMVDMISTQRAYEMNSKAVSTADQML 254



 Score = 40.3 bits (94), Expect = 0.086,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 7/45 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +GL  Q   +  IS N+ANA TTG       Y+++   FE++++ 
Sbjct: 10 TGLEAQDIALSTISNNLANAATTG-------YKKERAVFEDLIYQ 47


>gi|126444045|ref|YP_001061246.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668]
 gi|134280998|ref|ZP_01767708.1| flagellar biosynthesis/type III secretory pathway lipoprotein
           [Burkholderia pseudomallei 305]
 gi|167725930|ref|ZP_02409166.1| flagellar hook protein FlgE [Burkholderia pseudomallei DM98]
 gi|167905090|ref|ZP_02492295.1| flagellar hook protein FlgE [Burkholderia pseudomallei NCTC 13177]
 gi|254182894|ref|ZP_04889487.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1655]
 gi|254299686|ref|ZP_04967135.1| flagellar hook protein FlgE [Burkholderia pseudomallei 406e]
 gi|125657218|gb|ABN48706.1| flagellar hook protein FlgE [Burkholderia pseudomallei]
 gi|126223536|gb|ABN87041.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668]
 gi|134248020|gb|EBA48104.1| flagellar biosynthesis/type III secretory pathway lipoprotein
           [Burkholderia pseudomallei 305]
 gi|157809637|gb|EDO86807.1| flagellar hook protein FlgE [Burkholderia pseudomallei 406e]
 gi|184213428|gb|EDU10471.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1655]
          Length = 395

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +G ++  N +V  E  DM    R Y AN + +   + MM   +  L
Sbjct: 350 AGSLELSNADVTQELVDMMSAQRNYQANSKVLSTENQMMQALMQAL 395



 Score = 41.5 bits (97), Expect = 0.046,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 9/68 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SG+   ++++  IS NIANA T G       ++    +F  ++ G  + G  + 
Sbjct: 2  SFNIALSGINAINSQLNTISHNIANANTYG-------FKAGRANFATMVAGTQANGTYIG 54

Query: 65 KIGVDQST 72
           I     T
Sbjct: 55 SITQSVGT 62


>gi|167628970|ref|YP_001679469.1| flagellar basal-body rod protein, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167591710|gb|ABZ83458.1| flagellar basal-body rod protein, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 267

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT-LDLLR 133
           SG ++  NVNV+ E   M    R Y AN + I+     +     +L R
Sbjct: 219 SGALELANVNVVQEMVQMISAARAYEANQKAIQSQDGTLEKACTELGR 266



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 34/113 (30%), Gaps = 22/113 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-------RKTISFEEVMH 56
           +I   + + SG+ VQ     + + N+AN  T         +R       R+   F     
Sbjct: 1   MIRGLYTSASGMLVQQTNQDVTANNLANVNTVSFKKDRAVFRGFPEMLIRRMHDFSPAEP 60

Query: 57  GSG-----------GVRVKKIGVDQST--FVEEFDPGHPVANASGI--VKYPN 94
           G             G  V  I  D ++       +P        G   V  P+
Sbjct: 61  GQAEKNPLIGRIGTGAVVDAIWTDPTSAGLRVTQNPTDLAIIGRGYFVVMGPD 113


>gi|56695100|ref|YP_165447.1| flagellar basal body rod protein FlgG [Ruegeria pomeroyi DSS-3]
 gi|56676837|gb|AAV93503.1| flagellar basal-body rod protein FlgG [Ruegeria pomeroyi DSS-3]
          Length = 261

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R++ IS N+AN  TTG       Y  +   F ++
Sbjct: 1  MRALKIAATGMSAQQMRVETISNNLANMNTTG-------YNARRAEFADL 43



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 5/54 (9%)

Query: 80  GHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G+P  +       G ++  +V+ + E  ++ E  R Y  N + I     MM+ T
Sbjct: 204 GNPGEDGLGTLRQGYLEDSSVDAVREVTELIEAQRGYEMNAKVISAVDQMMSAT 257


>gi|32490792|ref|NP_871046.1| flagellar basal body rod protein FlgG [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165998|dbj|BAC24189.1| flgG [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 260

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVN+  E   M +T R Y  N + I  S  M+     L
Sbjct: 218 FVENSNVNIAEELITMIQTQRAYELNSKVISTSDQMLQRLSQL 260



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS NI+N  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLAIAKTGLEAQQINMDVISNNISNVSTNG-------FKRQKAIFEDLLYQT 48


>gi|126734107|ref|ZP_01749854.1| flagellar basal-body rod protein FlgG [Roseobacter sp. CCS2]
 gi|126716973|gb|EBA13837.1| flagellar basal-body rod protein FlgG [Roseobacter sp. CCS2]
          Length = 261

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTP 39
          + +  IA +G+  Q  R+++IS N+AN  TTG  P
Sbjct: 1  MRALKIAAAGMTAQQMRVEVISNNLANMNTTGYNP 35



 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  +V+ + E  D+ E  R Y  N + I  +  M++  + L
Sbjct: 216 QGYLEDSSVDPVREVTDLIEAQRGYELNSKVITAADQMLSAMVQL 260


>gi|158321569|ref|YP_001514076.1| hypothetical protein Clos_2549 [Alkaliphilus oremlandii OhILAs]
 gi|158141768|gb|ABW20080.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
          oremlandii OhILAs]
          Length = 264

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A SG+  Q   M  IS N+AN  TTG       Y+++ + F+++++ +
Sbjct: 7  AASGMKAQQLNMDTISNNLANVNTTG-------YKKQKVEFKDLLYAN 47



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV ++ E   +    R Y  N + I+ S +M+    +L R
Sbjct: 220 YLETSNVQIVDEMVRLITAQRAYEINSKAIQTSDEMLGIANNLRR 264


>gi|90418392|ref|ZP_01226304.1| basal body rod protein flgG [Aurantimonas manganoxydans SI85-9A1]
 gi|90338064|gb|EAS51715.1| basal body rod protein flgG [Aurantimonas manganoxydans SI85-9A1]
          Length = 262

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV+ + E +++    R Y  N + I  + +M +
Sbjct: 215 QQGYLEDSNVDPVKEISELISAQRAYEMNSKVISAADEMAS 255



 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 10/60 (16%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGV 61
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++    + GV
Sbjct: 1  MRALAIAATGMNAQQTNVEVIANNIANINTTG-------FKRARAEFTDLLYQVERAQGV 53


>gi|323700159|ref|ZP_08112071.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
 gi|323460091|gb|EGB15956.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
           ND132]
          Length = 558

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  +M  T R + AN + I     M+   + + R
Sbjct: 516 EMSNVDMATEFVNMITTQRGFQANTKVITTVDSMLGEVISMKR 558



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 22/77 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------EVMH 56
          L +      SGL V S RM +I  N+AN  TTG       ++   + FE         ++
Sbjct: 7  LFSGI----SGLTVHSERMTVIGNNLANVNTTG-------FKGAMMQFEDLASADFATVN 55

Query: 57 GSG----GVRVKKIGVD 69
          G G    GVRV  I  D
Sbjct: 56 GVGQVGRGVRVSTIYSD 72


>gi|115523179|ref|YP_780090.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisA53]
 gi|115517126|gb|ABJ05110.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           BisA53]
          Length = 262

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            ++  NV+ + E  ++    R Y  N + I+ + +M +
Sbjct: 218 YLESSNVDPVKEITELISAQRSYEMNSKVIQAADEMAS 255



 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 7/53 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + S  IA +G++ Q   +++I+ NIAN  TT        Y+R    F ++ + 
Sbjct: 1  MRSLAIAATGMSAQQLNVEVIANNIANINTTS-------YKRSRAEFTDLFYQ 46


>gi|219670134|ref|YP_002460569.1| hypothetical protein Dhaf_4124 [Desulfitobacterium hafniense DCB-2]
 gi|219540394|gb|ACL22133.1| protein of unknown function DUF1078 domain protein
           [Desulfitobacterium hafniense DCB-2]
          Length = 426

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NV++  E  DM  T R + AN + I  S  ++   +DL R
Sbjct: 382 VEMSNVDLSQEFTDMIVTQRGFQANSRVITVSDSLLQELIDLKR 425



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL     +M ++  NIAN  TTG       ++R  ++F  ++  +
Sbjct: 1  MLRSLYSAISGLKNHQIKMDVVGNNIANVNTTG-------FKRSRVTFSTMLSQT 48


>gi|85710164|ref|ZP_01041229.1| flagellar hook protein [Erythrobacter sp. NAP1]
 gi|85688874|gb|EAQ28878.1| flagellar hook protein [Erythrobacter sp. NAP1]
          Length = 279

 Score = 54.2 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 25/50 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A A+G ++  NV++  E   +    R + AN + I  +  +  T L+L R
Sbjct: 230 AIATGTLERSNVDLAEEMVSLLTAQRNFQANARAIDTATAITQTVLNLQR 279



 Score = 37.6 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 17/73 (23%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------- 59
          S   + SG+      +++IS NIANA T G       +++ +  F +++   G       
Sbjct: 2  SFFTSLSGMRNAETDLRVISNNIANAETAG-------FKKSSAQFSDLVASGGSTDPRTT 54

Query: 60 ---GVRVKKIGVD 69
             G  V +I  D
Sbjct: 55 PGIGATVSRISQD 67


>gi|295111397|emb|CBL28147.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria
           [Synergistetes bacterium SGP1]
          Length = 268

 Score = 54.2 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NV V+ E   M    R Y AN + I+ + +++     L R
Sbjct: 222 QGVLEMSNVQVVEEMVGMIIAQRAYEANSKGIQTADELLRIANGLKR 268



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +   + SG+  Q   + ++S N+AN  T         Y+++   FE++++ 
Sbjct: 1  MLRALWSSASGMIAQQTNLDVVSHNLANVNT-------QGYKKRRADFEDLLYQ 47


>gi|229591869|ref|YP_002873988.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens
           SBW25]
 gi|229363735|emb|CAY51140.1| flagellar basal-body rod protein [Pseudomonas fluorescens SBW25]
          Length = 261

 Score = 54.2 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV+ + E  +M  T R Y  N + I  +  M++
Sbjct: 220 ETSNVSTVEEMVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  +A +GL+ Q   +  IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTTISNNLANVSTTG-------FKRDRAEFQDLLYQ 47


>gi|330808197|ref|YP_004352659.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376305|gb|AEA67655.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 261

 Score = 54.2 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV+ + E  +M  T R Y  N + I  +  M++
Sbjct: 220 ETSNVSTVEEMVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  +A +GL+ Q   +  IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTTISNNLANVSTTG-------FKRDRAEFQDLLYQ 47


>gi|260431748|ref|ZP_05785719.1| flagellar basal-body rod protein FlgG [Silicibacter
          lacuscaerulensis ITI-1157]
 gi|260415576|gb|EEX08835.1| flagellar basal-body rod protein FlgG [Silicibacter
          lacuscaerulensis ITI-1157]
          Length = 261

 Score = 54.2 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R++ IS N+AN  TTG       Y  +   F ++
Sbjct: 1  MRALKIAATGMSAQQMRVETISNNLANMNTTG-------YNARRAEFADL 43



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  ++ E  R Y  N + I     MM  T
Sbjct: 216 QGYLEDSSVDAVREVTELIEAQRGYEMNAKVISAVDQMMGAT 257


>gi|222147375|ref|YP_002548332.1| flagellar hook protein FlgE [Agrobacterium vitis S4]
 gi|221734365|gb|ACM35328.1| flagellar hook protein [Agrobacterium vitis S4]
          Length = 411

 Score = 54.2 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 24/41 (58%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV++  E +DM    R Y AN +  + + DM+ T ++++R
Sbjct: 371 SNVDLASELSDMIAAQRAYSANSKVFQTAADMLDTVINMVR 411



 Score = 40.7 bits (95), Expect = 0.073,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 7/86 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L ++ + + SGL  QS ++  I +NI+N  TTG       Y+    +F  +++G      
Sbjct: 3  LASAMNSSVSGLTAQSNKLTSIGDNISNTSTTG-------YKGTETAFSSLVNGGTTSTT 55

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGI 89
           +                   +  G 
Sbjct: 56 TQTVSQSGDLESTSSETDLAIDGDGY 81


>gi|306820122|ref|ZP_07453770.1| flagellar hook protein FlgE [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304551900|gb|EFM39843.1| flagellar hook protein FlgE [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 474

 Score = 54.2 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M  T R + AN + I  +  M+   ++L R
Sbjct: 428 SGALEMSNVDLAKEFTNMIVTQRGFQANSRVITTTDQMLEELVNLKR 474



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 23/59 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S + A S L    ARM +I  NIAN  T         ++           GS G R
Sbjct: 1  MMRSMNSAVSSLKNHQARMDVIGNNIANVNTVAFKAARTTFKDTYSQLTRAASGSSGDR 59


>gi|225548842|ref|ZP_03769819.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           94a]
 gi|225370445|gb|EEG99881.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           94a]
          Length = 282

 Score = 54.2 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +  NVN + E   M E NR Y AN +TI+    ++   + ++ +
Sbjct: 238 EASNVNTVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 11 ANSGLAVQSARMQIISENIANAR 33
          A SG+  +  ++  +S N+AN  
Sbjct: 8  AASGMMAERRKLDTVSNNLANID 30


>gi|238752865|ref|ZP_04614330.1| Lateral flagellar rod protein (FlgG-like) [Yersinia rohdei ATCC
           43380]
 gi|238708904|gb|EEQ01157.1| Lateral flagellar rod protein (FlgG-like) [Yersinia rohdei ATCC
           43380]
          Length = 261

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM    R Y  N + +  + DM+
Sbjct: 215 EHGSLEGSNVQVVEEMVDMITVQRAYEMNAKMVSAADDML 254



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 10/59 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M+    +  ++ +GLA Q A+M  IS N+AN  T G       ++R  + FE++ + + 
Sbjct: 1  MNP---ALWVSKTGLAAQDAKMNAISNNLANVNTDG-------FKRDRVVFEDLFYQNQ 49


>gi|319403961|emb|CBI77549.1| Flagellar basal-body rod protein flgG [Bartonella rochalimae ATCC
           BAA-1498]
 gi|319406976|emb|CBI80613.1| Flagellar basal-body rod protein flgG [Bartonella sp. 1-1C]
          Length = 264

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 79  PGHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           PG P  +  G     +++  NV+ + E  ++    R Y  N + I+ S +M 
Sbjct: 205 PGDPKEDGYGSIMQAMLEASNVDPVKEMTELIAAQRSYEMNSKVIQASDEMA 256



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 7/52 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + S  IA +G+A Q   + +I+ N+AN  TTG       ++R    F ++M+
Sbjct: 3  MKSLSIAATGMAAQQTNLDVIANNMANINTTG-------FKRGRAEFADLMY 47


>gi|114777905|ref|ZP_01452819.1| flagellar basal-body rod protein FlgG [Mariprofundus ferrooxydans
           PV-1]
 gi|114551692|gb|EAU54244.1| flagellar basal-body rod protein FlgG [Mariprofundus ferrooxydans
           PV-1]
          Length = 251

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NV+++ E  ++    R Y  N + I+ S +M+ T 
Sbjct: 205 QGTLEMSNVSMVEEMVNLIAGQRAYEMNSKAIQASDEMLQTA 246



 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 7/44 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +A QS  + +IS NIAN  T G       ++R   +F+++M+  
Sbjct: 1  MAAQSLNVDVISNNIANVNTNG-------FKRGRANFQDLMYQQ 37


>gi|258514011|ref|YP_003190233.1| hypothetical protein Dtox_0696 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777716|gb|ACV61610.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 263

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E ++M  T R Y AN + I  S +M+   + L R
Sbjct: 221 EMSNVDLTNEFSNMIITQRGYQANSKVITTSDEMLQELIGLKR 263



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 14/64 (21%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SGGVRVKK 65
          SG+     RM +I  NIAN  TTG       Y+   + F++V+         + GV +  
Sbjct: 10 SGMKNHQTRMDVIGNNIANVNTTG-------YKSSRVQFKDVLGQTIAGGQVASGVTIAG 62

Query: 66 IGVD 69
          I  D
Sbjct: 63 INKD 66


>gi|160878402|ref|YP_001557370.1| hypothetical protein Cphy_0244 [Clostridium phytofermentans ISDg]
 gi|160427068|gb|ABX40631.1| protein of unknown function DUF1078 domain protein [Clostridium
           phytofermentans ISDg]
          Length = 271

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV    E  ++  T R Y  N + I  + +M+    +L R
Sbjct: 225 TGYLEASNVQTADEIVNLIVTQRAYEMNSKVITAADEMLQQANNLRR 271



 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 27/86 (31%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
          ++ +     SG+  Q   +  IS N++N  T G       Y+++   F  +++       
Sbjct: 1  MMRALWTGASGMISQQTSLDTISNNLSNINTAG-------YKKENAQFSSLLYSKIQSKV 53

Query: 58 --------------SGGVRVKKIGVD 69
                          GVRV  I   
Sbjct: 54 TDSEGKVKPVIGQVGSGVRVTGIVSS 79


>gi|238762358|ref|ZP_04623329.1| Lateral flagellar rod protein (FlgG-like) [Yersinia kristensenii
           ATCC 33638]
 gi|238699343|gb|EEP92089.1| Lateral flagellar rod protein (FlgG-like) [Yersinia kristensenii
           ATCC 33638]
          Length = 261

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM    R Y  N + +  + DM+
Sbjct: 215 EHGSLEGSNVQVVEEMVDMITVQRAYEMNAKMVSAADDML 254



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 10/59 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M+    +  I+ +GLA Q A+M  IS N+AN  T G       ++R  + FE++ + + 
Sbjct: 1  MNP---ALWISKTGLAAQDAKMNAISNNLANVNTDG-------FKRDRVVFEDLFYQNQ 49


>gi|159045792|ref|YP_001534586.1| flagellar basal body rod protein FlgG [Dinoroseobacter shibae DFL
          12]
 gi|157913552|gb|ABV94985.1| flagellar basal-body rod protein FlgG [Dinoroseobacter shibae DFL
          12]
          Length = 261

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R+++IS N+AN  TTG       Y  +   F ++
Sbjct: 1  MRALTIAATGMSAQQMRVEVISNNLANMNTTG-------YNARRAEFADL 43



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  +V+ + E  ++ E  R Y  N + +  +  MM  T  +
Sbjct: 216 QGYLEASSVDAVREVTELIEAQRGYELNSKVMTAADQMMGATSQI 260


>gi|54308099|ref|YP_129119.1| flagellar basal body rod protein FlgG [Photobacterium profundum
           SS9]
 gi|46912525|emb|CAG19317.1| putative polar flagellar FlgG [Photobacterium profundum SS9]
          Length = 262

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A    +++  NVNV  E  +M E  R+Y  N + I     M++
Sbjct: 214 AIRQSMLETSNVNVTEELVNMIEAQRVYEMNSKVISTVDQMLS 256



 Score = 38.8 bits (90), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTIG-------FKKSRAVFEDLFYQN 48


>gi|254255089|ref|ZP_04948406.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
 gi|124899734|gb|EAY71577.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
          Length = 261

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 5/57 (8%)

Query: 82  PVANASGIVK-----YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P A+  G+V+       NV  + E  +M    R Y  + + +  +  MM     + R
Sbjct: 205 PGADGLGVVRQGALEGSNVQAVEEMVEMITAQRTYEMSTKVLSAADSMMQYLAQVAR 261



 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +G+  Q A++Q I+ N+AN  T G       ++R    FE++ + +
Sbjct: 7  ISKTGIQAQDAKLQTIANNLANVNTVG-------FKRDRAVFEDLFYRT 48


>gi|77457729|ref|YP_347234.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens
           Pf0-1]
 gi|77381732|gb|ABA73245.1| flagellar basal-body rod protein [Pseudomonas fluorescens Pf0-1]
          Length = 261

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV+ + E  +M  T R Y  N + I  +  M++
Sbjct: 220 ETSNVSTVEEMVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  +A +GL+ Q   +  IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTTISNNLANVSTTG-------FKRDRAEFQDLLYQ 47


>gi|15887898|ref|NP_353579.1| flagellar basal body rod protein FlgG [Agrobacterium tumefaciens
           str. C58]
 gi|20141428|sp|Q44338|FLGG_AGRT5 RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|15155490|gb|AAK86364.1| flagellar basal-body rod protein [Agrobacterium tumefaciens str.
           C58]
          Length = 262

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 5/50 (10%)

Query: 82  PVANASGIVK-----YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           P   + G VK       NV+ + E  D+    R Y  N + I  + +M +
Sbjct: 206 PDDPSYGYVKQSYLEGSNVDAVKEITDLITAQRAYEMNSKVITTADEMAS 255



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       Y+R    F ++++ +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTG-------YKRARAEFTDLLYQT 47


>gi|121602345|ref|YP_989400.1| flagellar basal body rod protein FlgG [Bartonella bacilliformis
          KC583]
 gi|120614522|gb|ABM45123.1| flagellar basal-body rod protein FlgG [Bartonella bacilliformis
          KC583]
          Length = 264

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 7/52 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + S  IA +G+A Q   + +I+ N+AN  TTG       Y+R    F ++M+
Sbjct: 3  MRSLSIAATGMAAQQTNLDVIANNLANINTTG-------YKRARAEFADLMY 47



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 5/52 (9%)

Query: 79  PGHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           PG+P  +  G +     +  NV+ + E  ++    R Y    + I+ S +M 
Sbjct: 205 PGNPKEDGYGSIMQATLEASNVDPVKEITELITAQRSYEMTSKVIQASDEMA 256


>gi|222824019|ref|YP_002575593.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100]
 gi|222539241|gb|ACM64342.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100]
          Length = 264

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 21/46 (45%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G V+  NV ++ E  D+    R Y A  + I  S DM+     L R
Sbjct: 219 GFVELSNVQLVEEMTDLITGQRAYEAGSKAITTSDDMLGIVNQLKR 264



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SG+  Q  ++ + S NI+N  T G       Y++    F ++M+ +
Sbjct: 1  MLRSLYTAASGMVSQQTQIDVTSNNISNVNTVG-------YKKSRAEFADLMYQT 48


>gi|330809230|ref|YP_004353692.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377338|gb|AEA68688.1| Flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 257

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NVN++ E + +    R Y  N + ++ S  ++ T  +L R
Sbjct: 211 QGYVEMSNVNLIDEMSGLVLAQRAYQMNARLLQASDQILETINNLRR 257



 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          +I S  IA+SGL    A +  IS N+AN +T G       Y+R  + F +++   G
Sbjct: 1  MIDSLSIASSGLTANQAWIDSISNNVANMQTIG-------YKRSQVDFHDMVREVG 49


>gi|316932823|ref|YP_004107805.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           DX-1]
 gi|315600537|gb|ADU43072.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           DX-1]
          Length = 262

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV V+ E +D+    R Y  N + +  +  M+ +T ++ R
Sbjct: 223 NVEVVTEISDLISAQRAYEMNAKVVSAADQMLQSTANMFR 262



 Score = 40.7 bits (95), Expect = 0.069,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + + + A +G+A Q   +Q+IS NIAN RTTG       ++++T  F+++
Sbjct: 1  MRALYTAATGMAAQELNVQVISNNIANMRTTG-------FKKQTAQFQDL 43


>gi|242280467|ref|YP_002992596.1| hypothetical protein Desal_3005 [Desulfovibrio salexigens DSM 2638]
 gi|242123361|gb|ACS81057.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 549

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE   M  T R + AN + I  +  MM   + L R
Sbjct: 507 EMSNVDLAVEFVSMITTQRGFQANSKVITTTDSMMGELIQLKR 549


>gi|91794995|ref|YP_564646.1| flagellar hook protein FlgE [Shewanella denitrificans OS217]
 gi|91716997|gb|ABE56923.1| flagellar basal body FlaE [Shewanella denitrificans OS217]
          Length = 402

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV+   E  ++    R Y +N + +  +  M    L+
Sbjct: 359 YLEGSNVDTTAEMVNLMSAQRNYQSNAKVLDVNSTMQQALLN 400



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 9/61 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIAN+ T G       +R     F  + +G  +GGV V 
Sbjct: 2  SFNIALSGLQSTTQDLNTISNNIANSSTVG-------FRGGRSEFAAIYNGGQAGGVSVM 54

Query: 65 K 65
           
Sbjct: 55 S 55


>gi|4928060|gb|AAD33398.1|AF129422_1 flagellar hook protein FlgE [Sinorhizobium meliloti]
          Length = 396

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 14/63 (22%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSGG 60
               SG+  QS R+  ++ENIANA TTG       Y+R +  F  ++       + SGG
Sbjct: 1  MRTGVSGMNAQSNRLSTVAENIANANTTG-------YKRASTEFSSMILPSGNGSYNSGG 53

Query: 61 VRV 63
          V+ 
Sbjct: 54 VQT 56



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E   M E+ R Y AN +  +   +++   ++L R
Sbjct: 350 SGALESSNVDIAEELTAMIESQRNYTANSKVFQTGSELLEVLVNLKR 396


>gi|332298514|ref|YP_004440436.1| flagellar basal-body rod protein FlgG [Treponema brennaborense DSM
           12168]
 gi|332181617|gb|AEE17305.1| flagellar basal-body rod protein FlgG [Treponema brennaborense DSM
           12168]
          Length = 264

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+V+ E   M    R Y  + + I+ S  M+++ ++L R
Sbjct: 220 FLEMSNVSVVNEMVQMIVAQRAYEFSSKAIQTSDTMLSSAVNLKR 264



 Score = 41.5 bits (97), Expect = 0.040,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A +G+  Q A +  IS N++N  TTG       Y+++ + FE++++ +
Sbjct: 1  MVRSLWTAATGMNGQQANIDAISNNLSNVNTTG-------YKQQRVEFEDLIYQN 48


>gi|296534160|ref|ZP_06896654.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
           49957]
 gi|296265515|gb|EFH11646.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
           49957]
          Length = 262

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVNV+ E   +    R Y  N + I  S +M+ +TL  +R
Sbjct: 216 QGYLETSNVNVVQEITALITAQRAYEMNSKVITASDEML-STLSRMR 261



 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 7/52 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + S +IA +G+  Q   +++IS NIAN  TT        Y+R+   F+++++
Sbjct: 1  MRSLNIAGTGMMAQQTNVEVISNNIANMSTTA-------YKRRRAEFQDLLY 45


>gi|312884832|ref|ZP_07744524.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367484|gb|EFP95044.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 261

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 220 EGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDML 254



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +G+A Q  +M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVG-------FKRDRVVFEDLFYTIQRQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +V ++    S    
Sbjct: 54 AQVDEVNELPSGVQL 68


>gi|332162899|ref|YP_004299476.1| Lateral flagellar rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604254|emb|CBY25752.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325667129|gb|ADZ43773.1| Lateral flagellar rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863349|emb|CBX73472.1| flagellar basal-body rod protein flgG [Yersinia enterocolitica
           W22703]
          Length = 261

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM    R Y  N + +  + DM+
Sbjct: 215 EHGSLEGSNVQVVEEMVDMITVQRAYEMNAKMVSAADDML 254



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 10/59 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M+    +  ++ +GLA Q A+M  IS N+AN  T G       ++R  + FE++ + + 
Sbjct: 1  MNP---ALWVSKTGLAAQDAKMNAISNNLANVNTDG-------FKRDRVVFEDLFYQNQ 49


>gi|284041521|ref|YP_003391861.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
 gi|283945742|gb|ADB48486.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
          Length = 293

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  +   M    R + AN + I  S +M+   ++L R
Sbjct: 247 AGMLEMSNVDLATQFTTMITAQRGFQANSRVISTSDEMLQDLVNLKR 293



 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 15/64 (23%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMH 56
          M  + ++     SGL V    + + + ++AN  T         Y+    +F+    ++  
Sbjct: 2  MRGMFSAI----SGLKVNQTMLDVTANDLANVNTVA-------YKSSRTTFQDSLAQLQR 50

Query: 57 GSGG 60
          G+ G
Sbjct: 51 GAAG 54


>gi|218674651|ref|ZP_03524320.1| flagellar hook protein FlgE [Rhizobium etli GR56]
          Length = 77

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 31/61 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A SG++ Q+ R+  +S+NIANA TTG    S  +    +      + SGGV+ 
Sbjct: 3  IFGSMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSGNYNSGGVQT 62

Query: 64 K 64
           
Sbjct: 63 S 63


>gi|313894975|ref|ZP_07828534.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320530443|ref|ZP_08031501.1| flagellar basal-body rod protein FlgG [Selenomonas artemidis F0399]
 gi|312976428|gb|EFR41884.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320137276|gb|EFW29200.1| flagellar basal-body rod protein FlgG [Selenomonas artemidis F0399]
          Length = 264

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E  +M  + R Y +N + I  S  M+     L R
Sbjct: 218 QGTLEMSNVQIVEEMVEMIISQRAYESNSKAITTSDSMLEIANTLKR 264



 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANART 34
          ++ +   A SG+  Q A M I++ NIAN  T
Sbjct: 1  MMRALWSAASGMKAQQAHMDIVAHNIANVNT 31


>gi|261856358|ref|YP_003263641.1| flagellar basal-body rod protein FlgG [Halothiobacillus
           neapolitanus c2]
 gi|261836827|gb|ACX96594.1| flagellar basal-body rod protein FlgG [Halothiobacillus
           neapolitanus c2]
          Length = 262

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             G+++  NVNV+ E   M ET R Y  N + I  +  M+ T 
Sbjct: 216 QQGMLESSNVNVVEELVSMIETQRAYEMNSKAISATSSMLQTL 258



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          IA +GL  Q  RM +IS N+AN  TTG       +++    FE++++ +
Sbjct: 8  IAKTGLDAQQTRMSVISNNLANVNTTG-------FKQDRAVFEDLIYQN 49


>gi|288940411|ref|YP_003442651.1| flagellar basal-body rod protein FlgG [Allochromatium vinosum DSM
           180]
 gi|288895783|gb|ADC61619.1| flagellar basal-body rod protein FlgG [Allochromatium vinosum DSM
           180]
          Length = 263

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 5/54 (9%)

Query: 78  DPGHPVANASG-IV----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              +P  N  G +V    +  NVN+  E  +M ET R Y  N + I  +  M+ 
Sbjct: 202 QQSNPGENGFGSLVQCSLETSNVNMAEELVNMIETQRAYEVNSKAISAADSMLQ 255



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  IA +GL  Q  RM ++S N+AN  TTG       +++    FE++++ S
Sbjct: 1  MNQALWIAKTGLDAQQTRMSVVSNNLANVNTTG-------FKKGRAVFEDLIYHS 48


>gi|90411007|ref|ZP_01219021.1| putative polar flagellar FlgG [Photobacterium profundum 3TCK]
 gi|90328220|gb|EAS44531.1| putative polar flagellar FlgG [Photobacterium profundum 3TCK]
          Length = 262

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A    +++  NVNV  E  +M E  R+Y  N + I     M++
Sbjct: 214 AIRQSMLETSNVNVTEELVNMIEAQRVYEMNSKVISTVDQMLS 256



 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTIG-------FKKSRAVFEDLFYQN 48


>gi|304570583|ref|YP_388203.2| flagellar hook protein FlgE [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 547

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 7/57 (12%)

Query: 84  ANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ANA+G        ++  NV++  E  +M  T R + +N + I  +  M+   + + R
Sbjct: 491 ANANGYGTVNSNSLEQSNVDLAKEFVNMITTQRGFQSNSKVITTTDTMLEVVIQMKR 547



 Score = 40.3 bits (94), Expect = 0.091,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          L AS     SGL     RM ++  NIAN  T G
Sbjct: 3  LTASMWTGISGLLAHGERMNVLGNNIANVNTVG 35


>gi|183598619|ref|ZP_02960112.1| hypothetical protein PROSTU_02019 [Providencia stuartii ATCC 25827]
 gi|188020798|gb|EDU58838.1| hypothetical protein PROSTU_02019 [Providencia stuartii ATCC 25827]
          Length = 260

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +++  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 218 MLETSNVNVAEELVNMIQTQRAYEINSKAVSASDQMLQRLTQL 260



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   + +IS N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDTQQTNLDVISNNLANVSTNG-------FKRQRAVFEDLLYQN 48


>gi|302338303|ref|YP_003803509.1| flagellar basal-body rod protein FlgF [Spirochaeta smaragdinae DSM
           11293]
 gi|301635488|gb|ADK80915.1| flagellar basal-body rod protein FlgF [Spirochaeta smaragdinae DSM
           11293]
          Length = 282

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E   M E NR Y AN + ++    +    ++
Sbjct: 234 QGFLEGSNVNSVTEMVRMIEVNRAYEANQKAMQTHDALTGRLIN 277



 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 7/39 (17%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
           SG+  Q  RM  IS N+AN    G       Y+R    
Sbjct: 9  ASGMVDQMHRMDAISNNLANVDLVG-------YKRDQSV 40


>gi|126668560|ref|ZP_01739514.1| Flagellar basal body rod protein [Marinobacter sp. ELB17]
 gi|126626965|gb|EAZ97608.1| Flagellar basal body rod protein [Marinobacter sp. ELB17]
          Length = 262

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV V+ E  +M  T R Y  N + +     M+ 
Sbjct: 215 EQGSIESSNVEVVEELVNMITTQRAYEMNSKVVSTVDQMLQ 255



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 10/57 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          M+    +  ++ +GL+ Q   M  IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MNP---ALWVSKTGLSAQDTNMSTISNNLANVNTTG-------FKRDRAVFQDLLYQ 47


>gi|289548898|ref|YP_003473886.1| flagellar basal-body rod protein FlgG [Thermocrinis albus DSM
           14484]
 gi|289182515|gb|ADC89759.1| flagellar basal-body rod protein FlgG [Thermocrinis albus DSM
           14484]
          Length = 262

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 66  IGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           I  D S      +PG+        G ++  NVN++ E  ++    R +  N + I  + D
Sbjct: 193 IQTDASGEPIVDNPGNQGLGTLLQGYLESSNVNIVEEMVNLIIAQRAFEFNSKGIMAADD 252

Query: 124 MMTTTLDL 131
           M+    +L
Sbjct: 253 MLGQVANL 260



 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 10/74 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          +  +   + SG++ Q   + +IS N+AN  T G       +++   +F+++++ +    G
Sbjct: 1  MFRALWTSASGMSAQQTNLDVISHNMANVNTVG-------FKKMRPTFQDLLYQTVRDPG 53

Query: 61 VRVKKIGVDQSTFV 74
                    S F 
Sbjct: 54 APTSPTTRAPSGFQ 67


>gi|309779447|ref|ZP_07674208.1| flagellar hook protein FlgE [Ralstonia sp. 5_7_47FAA]
 gi|308921688|gb|EFP67324.1| flagellar hook protein FlgE [Ralstonia sp. 5_7_47FAA]
          Length = 404

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R Y AN QTIK    ++ T + L
Sbjct: 362 VEQSNVDLSAELVNMIVAQRSYQANAQTIKTEDTILQTLVSL 403



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 37/117 (31%), Gaps = 17/117 (14%)

Query: 13  SGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           SGL   S  + +I  N+ANA T G         D Y  +++          GV V K+  
Sbjct: 8   SGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVY-ARSLVGASDNQIGQGVSVTKVSQ 66

Query: 69  --DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
              Q       +P     N SG  +           D       Y  N Q  +   +
Sbjct: 67  AFTQGNVTITGNPLDIAINGSGFYR---------MVDQGSGQVSYTRNGQ-FQTDKN 113


>gi|189426344|ref|YP_001953521.1| hypothetical protein Glov_3295 [Geobacter lovleyi SZ]
 gi|189422603|gb|ACD97001.1| protein of unknown function DUF1078 domain protein [Geobacter
           lovleyi SZ]
          Length = 296

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M  T R Y AN +TI  + +M    L+L R
Sbjct: 254 ELSNVDMATEMVKMILTQRAYSANSKTITTADEMTQEVLNLKR 296


>gi|78219159|gb|ABB38508.1| flagellar hook protein FlgE [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 527

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 7/57 (12%)

Query: 84  ANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ANA+G        ++  NV++  E  +M  T R + +N + I  +  M+   + + R
Sbjct: 471 ANANGYGTVNSNSLEQSNVDLAKEFVNMITTQRGFQSNSKVITTTDTMLEVVIQMKR 527


>gi|323704840|ref|ZP_08116417.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535766|gb|EGB25540.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 248

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E   M    R Y AN +++    + +  +++
Sbjct: 199 KQGYLEGSNVNPVDEMVTMISAMRTYEANQKSVSAFDETLDKSVN 243



 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++   + A+SG+  Q   + ++S NIAN  T G
Sbjct: 1  MLRGLYTASSGMIAQQKIVDVLSNNIANVNTAG 33


>gi|89092138|ref|ZP_01165093.1| flagellar basal-body rod protein FlgG [Oceanospirillum sp. MED92]
 gi|89083873|gb|EAR63090.1| flagellar basal-body rod protein FlgG [Oceanospirillum sp. MED92]
          Length = 261

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVN + E  DM  T R Y  N + I  + +M++
Sbjct: 216 QGALEGSNVNSVQELVDMITTQRAYEMNSKVISTADEMLS 255



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +  + ++A +G+  Q   +++IS N+AN  T G       +++  + FE++M+ 
Sbjct: 1  MHGALNVAKTGMTAQDTNLKVISNNLANVSTVG-------FKKDAVVFEDLMYQ 47


>gi|149191155|ref|ZP_01869413.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
 gi|148834993|gb|EDL51972.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
          Length = 261

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV V+ E  DM  T R Y  + + +  + +M+ 
Sbjct: 215 KQGALEGSNVQVVEEMVDMIATQRAYEMSAKMVSAADEMLQ 255



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  I+ +G+A Q A+M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MHSALWISKTGMAAQDAKMTAISNNLANINTVG-------FKRDRVVFEDLFYSVDKQAG 53

Query: 61 VRVKKIGVDQSTFVE 75
              ++    +    
Sbjct: 54 TETTELNEHPTGIQL 68


>gi|158320521|ref|YP_001513028.1| hypothetical protein Clos_1488 [Alkaliphilus oremlandii OhILAs]
 gi|158140720|gb|ABW19032.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
           oremlandii OhILAs]
          Length = 448

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  DM  T R + AN + I  S +M+   +++ R
Sbjct: 403 GAIEMSNVDISREFTDMITTQRGFQANSRIITTSDEMLQEIVNMKR 448



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A S L     +M +I  NIAN  T G       ++   ++F+EV   +
Sbjct: 1  MMRSMYSAVSSLKAHQLKMDVIGNNIANVNTVG-------FKGTRVTFQEVFSQT 48


>gi|148980300|ref|ZP_01815987.1| putative flagellar basal-body rod protein [Vibrionales bacterium
           SWAT-3]
 gi|145961319|gb|EDK26629.1| putative flagellar basal-body rod protein [Vibrionales bacterium
           SWAT-3]
          Length = 250

 Score = 53.8 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV V+ E  DM  T R Y  + + +  + +M+ 
Sbjct: 204 KQGALEGSNVQVVEEMVDMIATQRAYEMSAKMVSAADEMLQ 244



 Score = 41.5 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 10/64 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGGVRVKKIGVDQS 71
          +A Q A+M  IS N+AN  T G       ++R  + FE++        G    ++    +
Sbjct: 1  MAAQDAKMTAISNNLANINTVG-------FKRDRVVFEDLFYSVDKQAGTETTELNEHPT 53

Query: 72 TFVE 75
              
Sbjct: 54 GIQL 57


>gi|56964026|ref|YP_175757.1| flagellar basal body rod protein FlgG [Bacillus clausii KSM-K16]
 gi|56910269|dbj|BAD64796.1| flagellar hook protein FlgE [Bacillus clausii KSM-K16]
          Length = 267

 Score = 53.8 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E ++M    R + AN + I  S +++   ++L R
Sbjct: 220 QSGYLEMSNVDLADEFSEMIVAQRGFQANSRIITTSDEILQELVNLKR 267



 Score = 33.7 bits (77), Expect = 9.3,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 18/66 (27%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-----------EVMHGSGGV 61
          SG+     ++ ++  NIAN  T G       +++  + F+                 GGV
Sbjct: 10 SGMKGFQTKLDVVGNNIANVNTHG-------FKKGRVMFQDMVSQQVQGPMAATPNRGGV 62

Query: 62 RVKKIG 67
            K+IG
Sbjct: 63 NSKQIG 68


>gi|326404069|ref|YP_004284151.1| flagellar basal-body rod protein FlgG [Acidiphilium multivorum
           AIU301]
 gi|325050931|dbj|BAJ81269.1| flagellar basal-body rod protein FlgG [Acidiphilium multivorum
           AIU301]
          Length = 260

 Score = 53.8 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V+  NVNV+ E  D+    R Y  N Q +  ++ M++T   L
Sbjct: 216 QGFVENSNVNVVSEVTDLITAQRAYDMNSQVVTATNQMLSTLTQL 260



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 7/53 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + +  IA +G+  Q   +++IS NIAN  TTG       Y+ + ++F+++++ 
Sbjct: 1  MRALDIAATGMQAQQTNVEVISNNIANMTTTG-------YKAQRVAFQDLLYQ 46


>gi|262273527|ref|ZP_06051341.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
           101886]
 gi|262222505|gb|EEY73816.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
           101886]
          Length = 243

 Score = 53.8 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  NV+V+ E  +M  T R Y  N + +  +  M+
Sbjct: 202 EGSNVSVVEEMVNMITTQRAYEMNAKVVSSADQML 236


>gi|220929459|ref|YP_002506368.1| hypothetical protein Ccel_2042 [Clostridium cellulolyticum H10]
 gi|219999787|gb|ACL76388.1| protein of unknown function DUF1078 domain protein [Clostridium
           cellulolyticum H10]
          Length = 454

 Score = 53.8 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 409 GTLEMSNVDLSREFTDMIVTQRGFQANSRIITTSDEMLQELVNLKR 454



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  + +      SGL    A+M +I  N+AN  T G       ++   ++F+E+ + +
Sbjct: 2  MRSMFSGV----SGLKAHQAKMDVIGNNVANVNTLG-------FKAGRVTFQEIFNQT 48


>gi|92116936|ref|YP_576665.1| flagellar basal body rod protein FlgG [Nitrobacter hamburgensis
           X14]
 gi|91799830|gb|ABE62205.1| Flagellar basal-body rod FlgG [Nitrobacter hamburgensis X14]
          Length = 262

 Score = 53.8 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 7/62 (11%)

Query: 79  PGHPVANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P   +AN  G        ++  NV V+ E +D+    R Y  N + I  +  M+ +   L
Sbjct: 201 PQDGIANIDGYGDMQQSSLEQANVEVVSEISDLIAAQRAYEMNAKVISAADQMLQSASAL 260

Query: 132 LR 133
            R
Sbjct: 261 FR 262



 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 7/44 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          A +G+A Q   +Q+IS NIAN RTTG       Y+++  +F+++
Sbjct: 7  AATGMAAQELNVQVISNNIANLRTTG-------YKKQRAAFQDL 43


>gi|89895710|ref|YP_519197.1| hypothetical protein DSY2964 [Desulfitobacterium hafniense Y51]
 gi|89335158|dbj|BAE84753.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 383

 Score = 53.8 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NV++  E  DM  T R + AN + I  S  ++   +DL R
Sbjct: 339 VEMSNVDLSQEFTDMIVTQRGFQANSRVITVSDSLLQELIDLKR 382



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL     +M +I  NIAN  TTG       ++R  ++F  ++  +
Sbjct: 1  MLRSLYSAISGLKNHQIKMDVIGNNIANVNTTG-------FKRSRVTFSTMLSQT 48


>gi|302669847|ref|YP_003829807.1| flagellar hook-associated protein FlgK2 [Butyrivibrio
          proteoclasticus B316]
 gi|302394320|gb|ADL33225.1| flagellar hook-associated protein FlgK2 [Butyrivibrio
          proteoclasticus B316]
          Length = 615

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 19/87 (21%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------SF 51
          M       +IA SGL   +A +   + NIANA T G       Y R+ +          F
Sbjct: 1  MTSQFFGLNIAASGLRASNASLNTTANNIANANTDG-------YSRQKVTQAASNALRVF 53

Query: 52 EEVMHGSGGVRVKKIGVDQSTFVEEFD 78
                  GV    I   + +F   +D
Sbjct: 54 ATYGCAGAGVDTLAIDRVRDSF---YD 77


>gi|27381984|ref|NP_773513.1| flagellar basal body rod protein FlgG [Bradyrhizobium japonicum
           USDA 110]
 gi|27355154|dbj|BAC52138.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 262

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 21/101 (20%)

Query: 28  NIAN-ARTTGDTP-GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           N+AN A   G  P GS+ YR            + G  V  +  D                
Sbjct: 174 NLANFANEAGLEPLGSNLYR---------ETTASGTPVVGLPGDAGYGKI---------- 214

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
               ++  NV+ + E  ++    R Y  N + I+ S +M +
Sbjct: 215 NQKYLEASNVDPVKEITELISAQRAYEMNAKVIQASDEMAS 255



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 10/60 (16%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV---MHGSGGV 61
          + S  IA +G+  Q   +++I+ NIAN  +T        Y+R    F ++   M    GV
Sbjct: 1  MKSLAIAATGMNAQQTNIEVIANNIANINSTS-------YKRARAEFTDLFYQMDRMQGV 53


>gi|225551767|ref|ZP_03772710.1| flagellar hook-basal body complex protein [Borrelia sp. SV1]
 gi|225371562|gb|EEH00989.1| flagellar hook-basal body complex protein [Borrelia sp. SV1]
          Length = 282

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +  NVN + E   M E NR Y AN +TI+    ++   + ++ +
Sbjct: 238 EASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 11 ANSGLAVQSARMQIISENIANAR 33
          A SG+  +  ++  +S N+AN  
Sbjct: 8  AASGMMAERRKLDTVSNNLANID 30


>gi|223889387|ref|ZP_03623973.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           64b]
 gi|223885073|gb|EEF56177.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           64b]
          Length = 282

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +  NVN + E   M E NR Y AN +TI+    ++   + ++ +
Sbjct: 238 EASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 11 ANSGLAVQSARMQIISENIANAR 33
          A SG+  +  ++  +S N+AN  
Sbjct: 8  AASGMMAERRKLDTVSNNLANID 30


>gi|224534494|ref|ZP_03675070.1| flagellar hook-basal body complex protein [Borrelia spielmanii
           A14S]
 gi|224514171|gb|EEF84489.1| flagellar hook-basal body complex protein [Borrelia spielmanii
           A14S]
          Length = 282

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +  NVN + E   M E NR Y AN +TI+    ++   + ++ +
Sbjct: 238 EASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 14/23 (60%)

Query: 11 ANSGLAVQSARMQIISENIANAR 33
          A SG+  +  ++ ++S N+AN  
Sbjct: 8  AASGMMAERRKLDVVSNNLANID 30


>gi|224532954|ref|ZP_03673563.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           WI91-23]
 gi|224512118|gb|EEF82510.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           WI91-23]
          Length = 282

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +  NVN + E   M E NR Y AN +TI+    ++   + ++ +
Sbjct: 238 EASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 11 ANSGLAVQSARMQIISENIANAR 33
          A SG+  +  ++  +S N+AN  
Sbjct: 8  AASGMMAERRKLDTVSNNLANID 30


>gi|195941596|ref|ZP_03086978.1| flagellar hook-basal body complex protein (flhO) [Borrelia
           burgdorferi 80a]
 gi|216264480|ref|ZP_03436472.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           156a]
 gi|226320635|ref|ZP_03796194.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           29805]
 gi|215980953|gb|EEC21760.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           156a]
 gi|226233958|gb|EEH32680.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           29805]
 gi|312148084|gb|ADQ30743.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           JD1]
 gi|312149492|gb|ADQ29563.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           N40]
          Length = 282

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +  NVN + E   M E NR Y AN +TI+    ++   + ++ +
Sbjct: 238 EASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 11 ANSGLAVQSARMQIISENIANAR 33
          A SG+  +  ++  +S N+AN  
Sbjct: 8  AASGMMAERRKLDTVSNNLANID 30


>gi|218249387|ref|YP_002375274.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           ZS7]
 gi|221217927|ref|ZP_03589394.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           72a]
 gi|224533400|ref|ZP_03673994.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           CA-11.2a]
 gi|225549985|ref|ZP_03770946.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           118a]
 gi|218164575|gb|ACK74636.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           ZS7]
 gi|221192233|gb|EEE18453.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           72a]
 gi|224513565|gb|EEF83922.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           CA-11.2a]
 gi|225369444|gb|EEG98896.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           118a]
          Length = 282

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +  NVN + E   M E NR Y AN +TI+    ++   + ++ +
Sbjct: 238 EASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 11 ANSGLAVQSARMQIISENIANAR 33
          A SG+  +  ++  +S N+AN  
Sbjct: 8  AASGMMAERRKLDTVSNNLANID 30


>gi|111115607|ref|YP_710225.1| flagellar hook-basal body complex protein [Borrelia afzelii PKo]
 gi|216263707|ref|ZP_03435702.1| flagellar hook-basal body complex protein [Borrelia afzelii ACA-1]
 gi|110890881|gb|ABH02049.1| flagellar hook-basal body complex protein [Borrelia afzelii PKo]
 gi|215980551|gb|EEC21372.1| flagellar hook-basal body complex protein [Borrelia afzelii ACA-1]
          Length = 282

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +  NVN + E   M E NR Y AN +TI+    ++   + ++ +
Sbjct: 238 EASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 14/23 (60%)

Query: 11 ANSGLAVQSARMQIISENIANAR 33
          A SG+  +  ++ ++S N+AN  
Sbjct: 8  AASGMMAERRKLDVVSNNLANID 30


>gi|15595120|ref|NP_212909.1| flagellar hook-basal body complex protein (flhO) [Borrelia
           burgdorferi B31]
 gi|2688723|gb|AAC67131.1| flagellar hook-basal body complex protein (flhO) [Borrelia
           burgdorferi B31]
          Length = 300

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +  NVN + E   M E NR Y AN +TI+    ++   + ++ +
Sbjct: 256 EASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 299



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 11 ANSGLAVQSARMQIISENIANAR 33
          A SG+  +  ++  +S N+AN  
Sbjct: 26 AASGMMAERRKLDTVSNNLANID 48


>gi|291288379|ref|YP_003505195.1| flagellar basal-body rod protein FlgG [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885539|gb|ADD69239.1| flagellar basal-body rod protein FlgG [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 262

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 7/55 (12%)

Query: 86  ASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G        ++  NV+V+ E  +M    R Y  N + ++   +M+    +L R
Sbjct: 208 EDGYGSITQNTLEMSNVSVVDEMVNMITGQRAYEINSKAVQTGDEMLQIVNNLKR 262



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +   A +G+  Q   +  IS N+AN    G       Y++    FE++++  
Sbjct: 1  MFRTLWTAATGMTAQQTNIDTISNNLANVNNIG-------YKKSRAHFEDLIYQE 48


>gi|187926954|ref|YP_001893299.1| flagellar basal body FlaE domain protein [Ralstonia pickettii 12J]
 gi|241665283|ref|YP_002983642.1| flagellar hook protein FlgE [Ralstonia pickettii 12D]
 gi|187728708|gb|ACD29872.1| flagellar basal body FlaE domain protein [Ralstonia pickettii 12J]
 gi|240867310|gb|ACS64970.1| protein of unknown function DUF1078 domain protein [Ralstonia
           pickettii 12D]
          Length = 402

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R Y AN QTIK    ++ T + +
Sbjct: 361 VEQSNVDLSQELVNMIIAQRSYQANAQTIKTQDTILQTLVTM 402



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 34/108 (31%), Gaps = 16/108 (14%)

Query: 13  SGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           SGL   S  + +I  N+ANA T G         D Y  +++          GV V ++  
Sbjct: 8   SGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVY-ARSLVGASDNQVGQGVEVTRVSQ 66

Query: 69  D--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              Q       +P     N +G  +           D       Y  N
Sbjct: 67  SFTQGNVTITGNPLDIAINGTGFYR---------MVDTASGQVSYSRN 105


>gi|89075497|ref|ZP_01161908.1| putative polar flagellar FlgG [Photobacterium sp. SKA34]
 gi|89048769|gb|EAR54340.1| putative polar flagellar FlgG [Photobacterium sp. SKA34]
          Length = 262

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     M++
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISTVDQMLS 256



 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTVG-------FKKGRAVFEDLFYQN 48


>gi|149201611|ref|ZP_01878585.1| Flagellar distal rod protein [Roseovarius sp. TM1035]
 gi|149144659|gb|EDM32688.1| Flagellar distal rod protein [Roseovarius sp. TM1035]
          Length = 262

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA-----SGIVKYPNVNVLVETADMRET 107
               G   V    +    ++       G+P+ +       G ++  NVNV+ E  +M E 
Sbjct: 180 ANPRGLEPVGETFVVESTASGAPVV--GNPLEDGMGDLVQGALETSNVNVVQELVEMIEA 237

Query: 108 NRLYMANLQTIKQSHDMMT 126
            R Y  N ++I  S +MM+
Sbjct: 238 QRAYEINSRSISASDEMMS 256



 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 10/68 (14%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVK 64
           H+A +GL  Q AR+Q+IS N+AN  TTG       ++R   +FE +++ +    G +  
Sbjct: 6  MHVAKTGLNAQQARIQVISNNLANVNTTG-------FKRDRANFETLLYQTLRPAGAQTS 58

Query: 65 KIGVDQST 72
          +     + 
Sbjct: 59 EATEQTAP 66


>gi|315636319|ref|ZP_07891569.1| flagellar basal-body rod protein FlgG [Arcobacter butzleri JV22]
 gi|315479408|gb|EFU70091.1| flagellar basal-body rod protein FlgG [Arcobacter butzleri JV22]
          Length = 262

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 20/37 (54%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +++  NV ++ E  D+    R Y AN + I  + +M+
Sbjct: 218 MLESSNVKLVNEMVDLITAQRAYEANSKAITTADNML 254



 Score = 40.3 bits (94), Expect = 0.097,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I   + A +G+     ++ + S NIAN  TTG       +++    F+++M+ S
Sbjct: 1  MIRGLYTAATGMNAMQHQIDVTSNNIANVNTTG-------FKKDRAEFQDLMYES 48


>gi|90579911|ref|ZP_01235719.1| putative polar flagellar FlgG [Vibrio angustum S14]
 gi|90438796|gb|EAS63979.1| putative polar flagellar FlgG [Vibrio angustum S14]
          Length = 262

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     M++
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISTVDQMLS 256



 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTVG-------FKKGRAVFEDLFYQN 48


>gi|310764858|gb|ADP09808.1| Flagellar basal-body rod protein, FlgG [Erwinia sp. Ejp617]
          Length = 260

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVNV  E   M +  R Y  N + +  S  M+     L
Sbjct: 218 YIETSNVNVAEELVTMIQVQRAYEINSKAVSASDQMLQRLAQL 260



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  +TG       ++R+   F+++++ +
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTG-------FKRQRAVFQDLLYQT 48


>gi|295706277|ref|YP_003599352.1| flagellar hook protein FlgE [Bacillus megaterium DSM 319]
 gi|294803936|gb|ADF41002.1| flagellar hook protein FlgE [Bacillus megaterium DSM 319]
          Length = 263

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 80  GHPVANASG-IV----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G P AN +G  V    +  NV++  E  DM    R + AN + I  S +++   ++L R
Sbjct: 205 GAPGANGTGSFVSSALEMSNVDLSEEFTDMIVAQRGFQANTRIITTSDEILQELVNLKR 263



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGS-G 59
          ++ S +   SG+     ++ ++  NIAN  T G   G   ++    + ++       + G
Sbjct: 1  MLRSMYSGISGMKNFQTKLDVLGNNIANVNTYGYKKGRTTFQDLVSQQVAGATAPGANRG 60

Query: 60 GVRVKKIG 67
          GV  K++G
Sbjct: 61 GVNAKQVG 68


>gi|297544701|ref|YP_003677003.1| fagellar hook-basal body protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842476|gb|ADH60992.1| fagellar hook-basal body protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 413

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E ADM  T R + AN + I  S +M+   +++ R
Sbjct: 368 GTLEMSNVDLANEFADMIVTQRGFQANAKIITASDEMLQDLVNMKR 413



 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL    ARM +I  NIAN  T G       Y+   ++F+E+   +
Sbjct: 1  MLRSMYSAVSGLKSHQARMDVIGNNIANVNTVG-------YKASRMTFKEIFSQT 48


>gi|289578425|ref|YP_003477052.1| fagellar hook-basal body protein [Thermoanaerobacter italicus Ab9]
 gi|289528138|gb|ADD02490.1| fagellar hook-basal body protein [Thermoanaerobacter italicus Ab9]
          Length = 413

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E ADM  T R + AN + I  S +M+   +++ R
Sbjct: 368 GTLEMSNVDLANEFADMIVTQRGFQANAKIITASDEMLQDLVNMKR 413



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL    ARM +I  NIAN  T G       Y+   ++F+E+   +
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVG-------YKASRMTFKEIFSQT 48


>gi|163733143|ref|ZP_02140587.1| flagellar basal-body rod protein FlgG [Roseobacter litoralis Och
           149]
 gi|161393678|gb|EDQ18003.1| flagellar basal-body rod protein FlgG [Roseobacter litoralis Och
           149]
          Length = 246

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  +V+ + E  ++ E  R Y  N + I  +  MM  T  +
Sbjct: 201 QGYLESSSVDAVREITELIEAQRGYEMNAKVISAADQMMGATTQI 245


>gi|299066528|emb|CBJ37718.1| Flagellar basal-body rod protein (Distal rod protein) [Ralstonia
           solanacearum CMR15]
          Length = 263

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 22/40 (55%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           A G ++  NV ++ E   +    R Y AN++ ++ S +++
Sbjct: 216 AQGFLEGSNVKMIDEMVGLMVAQRAYEANVKVVQASDEIL 255



 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +  + ++  +G+  Q   +  I+ N+AN  TTG       +++  +SF +++    G
Sbjct: 1  MFDALYVGATGMQAQQLNLDTIANNLANVNTTG-------FKKSRVSFTDLVAQEAG 50


>gi|157738176|ref|YP_001490860.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018]
 gi|157700030|gb|ABV68190.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018]
          Length = 262

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 20/37 (54%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +++  NV ++ E  D+    R Y AN + I  + +M+
Sbjct: 218 MLESSNVKLVNEMVDLITAQRAYEANSKAITTADNML 254



 Score = 40.3 bits (94), Expect = 0.099,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I   + A +G+     ++ + S NIAN  TTG       +++    F+++M+ S
Sbjct: 1  MIRGLYTAATGMNAMQHQIDVTSNNIANVNTTG-------FKKDRAEFQDLMYES 48


>gi|145298493|ref|YP_001141334.1| flagellar basal body rod protein FlgG [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851265|gb|ABO89586.1| flagellar basal body rod protein FlgG [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 262

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G+++  NVNV  E  ++ +  R+Y  N + +     MM+  + 
Sbjct: 216 KQGMLETSNVNVTEELVNLIQAQRVYEMNSKVLSAVDGMMSFLIQ 260



 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 10/58 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    +  I+ +GL  Q   + + S N+ANA T G       Y++    FE++++ +
Sbjct: 1  MNP---ALWISKTGLDAQQTNISVTSNNLANASTVG-------YKKSRAIFEDLLYQN 48


>gi|323139654|ref|ZP_08074696.1| flagellar basal-body rod protein FlgG [Methylocystis sp. ATCC
           49242]
 gi|322395086|gb|EFX97645.1| flagellar basal-body rod protein FlgG [Methylocystis sp. ATCC
           49242]
          Length = 262

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 18/39 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NV+ + E   +    R +  N + I+ + +M 
Sbjct: 216 QGYLESSNVDPVKELVSLISAQRAFELNSKVIQAADEMA 254



 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 8/71 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR-V 63
          + +  IA +G++ Q   +++I+ NIAN  TTG       ++R    F ++++ +  ++ V
Sbjct: 1  MRALAIAATGMSAQQQNIEVIAHNIANINTTG-------FKRSRAEFTDLLYQTDRLQGV 53

Query: 64 KKIGVDQSTFV 74
             G D +   
Sbjct: 54 SNRGRDATVPQ 64


>gi|302037613|ref|YP_003797935.1| flagellar hook protein FlgE [Candidatus Nitrospira defluvii]
 gi|300605677|emb|CBK42010.1| Flagellar hook protein FlgE [Candidatus Nitrospira defluvii]
          Length = 407

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG V+  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 361 SGTVEQSNVDLGKEFVDMIITQRAFQANSRAITTSDEMLQELVNLKR 407


>gi|205373385|ref|ZP_03226189.1| flagellar hook protein FlgE [Bacillus coahuilensis m4-4]
          Length = 426

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 377 AIQSGSLEMSNVDLSEEFTEMITAQRSFQANTRIITTSDEILQELVNLKR 426



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SG+     ++ +I  NIAN  T G       +++  ++F+++M+ +
Sbjct: 1  MLRSMYSGISGMKNAQTKLDVIGNNIANVNTYG-------FKKGRVTFQDLMNQT 48


>gi|163758031|ref|ZP_02165119.1| flagellar hook protein E [Hoeflea phototrophica DFL-43]
 gi|162284320|gb|EDQ34603.1| flagellar hook protein E [Hoeflea phototrophica DFL-43]
          Length = 419

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 8/58 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-VMHGSGG 60
          L        SG+  Q+ R+  +++N+ANA TTG       Y+R +  F   ++ GS G
Sbjct: 3  LYGMMRTGASGMNAQANRLGTVADNMANANTTG-------YKRASAEFSSLILPGSAG 53



 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  DM    R Y AN +  +   D+M   ++L R
Sbjct: 373 SGALESSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMEVLVNLKR 419


>gi|325274804|ref|ZP_08140831.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51]
 gi|324100049|gb|EGB97868.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51]
          Length = 38

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGD 37
          L +  +IA SG++ Q+ R+  ++ NIANA T   
Sbjct: 5  LSSVFNIAGSGMSAQNTRLNTVASNIANAETVSS 38


>gi|298529926|ref|ZP_07017328.1| flagellar basal-body rod protein FlgG [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509300|gb|EFI33204.1| flagellar basal-body rod protein FlgG [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 260

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV ++ E  +M    R Y  N + I+ S  M+     + R
Sbjct: 214 SGALESSNVEIVDEMVNMIIGQRAYEINSKAIQTSDQMLQMANQMKR 260



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 7/58 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          ++ S   A +G+A Q   + + S N+AN  T G       +++    FE++M+ +  V
Sbjct: 1  MMRSLWTAATGMAAQQMNIDVTSNNLANVNTDG-------FKKSQAQFEDLMYQTLKV 51


>gi|330445350|ref|ZP_08309002.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489541|dbj|GAA03499.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 262

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     M++
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISTVDQMLS 256



 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTVG-------FKKGRAVFEDLFYQN 48


>gi|319787119|ref|YP_004146594.1| flagellar basal-body rod protein FlgG [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465631|gb|ADV27363.1| flagellar basal-body rod protein FlgG [Pseudoxanthomonas suwonensis
           11-1]
          Length = 261

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NVNV+ E   M ET R Y  N + I  +  M+
Sbjct: 215 EQGALEGSNVNVVEELVSMIETQRAYEMNAKAISTTDSML 254



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  +A +GL  Q  RM +++ N+AN  TTG       ++R   +FE++++  
Sbjct: 1  MNQALWVAKTGLDAQQTRMSVVANNLANTNTTG-------FKRDRANFEDLLYQQ 48


>gi|312621331|ref|YP_004022944.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201798|gb|ADQ45125.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 255

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NVN + E  +M    R Y AN +      + +   + ++ R
Sbjct: 207 QGYLEGSNVNSVQEMVNMINVLRAYEANQKAFVIQDETLQKAVNEIAR 254



 Score = 34.1 bits (78), Expect = 7.2,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I   + + SG+ +    M + + N+AN  TTG
Sbjct: 1  MIRGIYTSASGMILNQKLMDLTANNVANVSTTG 33


>gi|259907636|ref|YP_002647992.1| Flagellar basal-body rod protein, FlgG [Erwinia pyrifoliae Ep1/96]
 gi|224963258|emb|CAX54742.1| Flagellar basal-body rod protein, FlgG [Erwinia pyrifoliae Ep1/96]
 gi|283477478|emb|CAY73394.1| Flagellar basal-body rod protein flgG [Erwinia pyrifoliae DSM
           12163]
          Length = 260

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVNV  E   M +  R Y  N + +  S  M+     L
Sbjct: 218 YIETSNVNVAEELVTMIQVQRAYEINSKAVSASDQMLQRLAQL 260



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  +TG       ++R+   F+++++ +
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTG-------FKRQRAVFQDLLYQT 48


>gi|114570497|ref|YP_757177.1| flagellar basal body rod protein FlgG [Maricaulis maris MCS10]
 gi|114340959|gb|ABI66239.1| flagellar basal-body rod protein FlgG [Maricaulis maris MCS10]
          Length = 261

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G V+  NVN + E   + +  R Y  N + I  S +MM
Sbjct: 215 QQGFVETSNVNSVSEITALIQAQRAYEMNARVITASDEMM 254



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +   A +G+  Q   +++IS N+AN  TTG       ++R+   F+++++ +
Sbjct: 1  MRALTTAATGMQAQQLNVEVISNNLANMNTTG-------FKRQRAEFQDLLYQN 47


>gi|323705438|ref|ZP_08117013.1| fagellar hook-basal body protein [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535340|gb|EGB25116.1| fagellar hook-basal body protein [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 424

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 27/46 (58%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E A+M  T R + AN + I  S +++   ++L+R
Sbjct: 379 GTLEMSNVDLANEFANMITTQRGFEANAKVITTSDEILQDLVNLIR 424



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL    A M +I  NIAN  T G       ++   ++F+E+ + +
Sbjct: 1  MLRSMYSAVSGLKANQAEMDVIGNNIANVNTVG-------FKASRMTFKEIFNQT 48


>gi|292489131|ref|YP_003532018.1| flagellar basal-body rod protein FlgG [Erwinia amylovora CFBP1430]
 gi|292900250|ref|YP_003539619.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291200098|emb|CBJ47224.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291554565|emb|CBA22177.1| Flagellar basal-body rod protein flgG [Erwinia amylovora CFBP1430]
 gi|312173289|emb|CBX81544.1| Flagellar basal-body rod protein flgG [Erwinia amylovora ATCC
           BAA-2158]
          Length = 260

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVNV  E   M +  R Y  N + +  S  M+     L
Sbjct: 218 YIETSNVNVAEELVTMIQVQRAYEINSKAVSASDQMLQRLAQL 260



 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  +TG       ++R+   F+++++ +
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTG-------FKRQRAVFQDLLYQT 48


>gi|300024606|ref|YP_003757217.1| flagellar basal-body rod protein FlgG [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526427|gb|ADJ24896.1| flagellar basal-body rod protein FlgG [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 262

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NV+ + E  ++    R Y  N + I  + DM +
Sbjct: 216 QGYLESSNVDPVKEITELIAAQRAYEMNSKVISAADDMFS 255



 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G++ Q   +++I+ N+AN  TTG       ++R    F ++++ +
Sbjct: 1  MRALSIAATGMSAQQTNVEVIANNVANINTTG-------FKRARAEFTDLLYQT 47


>gi|239817165|ref|YP_002946075.1| flagellar basal body FlaE domain protein [Variovorax paradoxus
           S110]
 gi|239803742|gb|ACS20809.1| flagellar basal body FlaE domain protein [Variovorax paradoxus
           S110]
          Length = 404

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 26/46 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ASG ++  NV++  E  ++    R Y AN QT+K    ++ T +++
Sbjct: 358 ASGALEASNVDLTSELVNLIVAQRSYQANAQTVKTQDQVVQTLINI 403



 Score = 41.8 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 10/59 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIGV 68
          SGL+  +A + +I  NIAN+ T G   G+        +F++V  GS    GV V  I  
Sbjct: 8  SGLSAAAANLDVIGNNIANSGTVGFKSGA-------ATFQDVYAGSRVGLGVAVSGIVQ 59


>gi|77165836|ref|YP_344361.1| hypothetical protein Noc_2373 [Nitrosococcus oceani ATCC 19707]
 gi|254434083|ref|ZP_05047591.1| flagellar basal-body rod protein FlgG [Nitrosococcus oceani
          AFC27]
 gi|76884150|gb|ABA58831.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207090416|gb|EDZ67687.1| flagellar basal-body rod protein FlgG [Nitrosococcus oceani
          AFC27]
          Length = 261

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  IA +GL  Q  RM  IS N+AN  TTG       ++R    FE++++ +
Sbjct: 1  MNQALWIAKTGLDAQQTRMATISNNLANVNTTG-------FKRDRAVFEDLLYQT 48



 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVNV+ E  +M ET R Y  N + I  + +M+      L
Sbjct: 216 QGALEGANVNVVEELVNMIETQRAYEMNSKAISSTDEMLRFATQTL 261


>gi|319406994|emb|CBI80631.1| Flagellar hook protein FlgE [Bartonella sp. 1-1C]
          Length = 402

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +SG ++  NV++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 355 SSGYLEDSNVDMGDELTDMIEAQRNYTANSKVFQTGSELMDVIVNLKR 402



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 15/71 (21%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------GG 60
               SG+  Q  R+  +++N+ANA T G       Y+R  + F   +  S       GG
Sbjct: 7  MRTGVSGMNAQGTRLSGVADNVANAGTIG-------YKRTDVQFSNYVTPSGKYAYVPGG 59

Query: 61 VRVKKIGVDQS 71
          V+   IG D S
Sbjct: 60 VK-SHIGHDVS 69


>gi|319403978|emb|CBI77566.1| Flagellar hook protein FlgE [Bartonella rochalimae ATCC BAA-1498]
          Length = 402

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +SG ++  NV++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 355 SSGYLEDSNVDMGDELTDMIEAQRNYTANSKVFQTGSELMDVIVNLKR 402



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 15/69 (21%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SGG 60
               SG+  Q  R+  +++N+ANA T G       Y+R  + F   +         SGG
Sbjct: 7  MRTGVSGMNAQGTRLSGVADNVANAGTIG-------YKRTNVQFSNYVTPSGQYAYVSGG 59

Query: 61 VRVKKIGVD 69
          V+   IG D
Sbjct: 60 VK-SHIGHD 67


>gi|269103188|ref|ZP_06155885.1| flagellar basal-body rod protein FlgG [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163086|gb|EEZ41582.1| flagellar basal-body rod protein FlgG [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 262

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     M++
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISTVDQMLS 256



 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTVG-------FKKGRAVFEDLFYQN 48


>gi|254473318|ref|ZP_05086715.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
 gi|211957434|gb|EEA92637.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
          Length = 262

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NV+ + E   +    R Y  N + I+ + DM 
Sbjct: 216 QGYLEGANVDPVKEITSLISAQRGYEMNSKVIQAADDMA 254



 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 10/60 (16%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV---MHGSGGV 61
          + +  IA +G++ Q   +++IS NIAN  TT        ++     F ++   M  + GV
Sbjct: 1  MKALAIAATGMSAQQKNLEVISNNIANMNTTA-------FKASRAEFSDLLYQMDRAAGV 53


>gi|323697472|ref|ZP_08109384.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. ND132]
 gi|323457404|gb|EGB13269.1| flagellar basal-body rod protein FlgG [Desulfovibrio desulfuricans
           ND132]
          Length = 260

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV ++ E   +    R +  N + I  S  M+ T +++ R
Sbjct: 213 AQGFLEGSNVEMVDEMVGLIVGQRAFEINSKAITTSDGMLQTAINIKR 260



 Score = 37.2 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   + +G+     ++  +S N+AN  TT        +++    FE++M+ +
Sbjct: 1  MMRSLWTSATGMIAMQTQIDTLSNNLANVSTTA-------FKKSRAEFEDLMYQT 48


>gi|332284019|ref|YP_004415930.1| hypothetical protein PT7_0766 [Pusillimonas sp. T7-7]
 gi|330427972|gb|AEC19306.1| hypothetical protein PT7_0766 [Pusillimonas sp. T7-7]
          Length = 412

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R Y AN QTIK    +M T + +
Sbjct: 370 VEESNVDMSQELVNMIIAQRTYQANAQTIKTQDQIMQTLISM 411



 Score = 37.2 bits (86), Expect = 0.72,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 10/57 (17%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKI 66
          SGL   +  + +I  NIAN+ T G       ++  T SF +V   S    G +V  I
Sbjct: 8  SGLNAAAQNLDVIGNNIANSGTVG-------FKAGTASFADVYASSRVGLGTQVASI 57


>gi|311992329|gb|ADQ26738.1| flagellar distal rod protein [Aeromonas hydrophila]
          Length = 261

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G+++  NVNV  E  ++ +  R+Y  N + +     MM+  + 
Sbjct: 215 KQGMLETSNVNVTEELVNLIQAQRVYEMNSKVLSAVDGMMSFLIQ 259



 Score = 41.8 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + + S N+ANA T G       Y++    FE++++ +
Sbjct: 6  ISKTGLDAQQTNISVTSNNLANASTVG-------YKKSRAIFEDLLYQN 47


>gi|121596384|ref|YP_988280.1| flagellar basal body rod protein [Acidovorax sp. JS42]
 gi|120608464|gb|ABM44204.1| flagellar basal body rod protein [Acidovorax sp. JS42]
          Length = 101

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 29/127 (22%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +   A IA SGL     R+   + N+AN  T G       +RR+T+  ++     GGV+ 
Sbjct: 1   MTTLAAIAQSGLQAAQLRLDSSAHNVANLNTPG-------FRRQTVD-QQAAPAPGGVQA 52

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +      +  V                      +  E  +       + ANL  ++++ +
Sbjct: 53  RVAAPAAAPGVA---------------------LEAEAVEQISATYAFQANLLVLRRADE 91

Query: 124 MMTTTLD 130
           M    LD
Sbjct: 92  MAGALLD 98


>gi|110677663|ref|YP_680670.1| flagellar basal body rod protein FlgG [Roseobacter denitrificans
           OCh 114]
 gi|109453779|gb|ABG29984.1| flagellar basal-body rod protein FlgG [Roseobacter denitrificans
           OCh 114]
          Length = 261

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  +V+ + E  ++ E  R Y  N + I  +  MM  T  +
Sbjct: 216 QGYLESSSVDAVREITELIEAQRGYEMNAKVISAADQMMGATTQI 260



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R++ IS N++N  TTG       Y  +   F ++
Sbjct: 1  MRALKIAATGMSAQQMRVETISNNLSNMSTTG-------YNARRAEFADL 43


>gi|51599025|ref|YP_073213.1| flagellar basal body rod protein FlgG [Borrelia garinii PBi]
 gi|51573596|gb|AAU07621.1| flagellar basal-body rod protein [Borrelia garinii PBi]
          Length = 265

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 222 EMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|226321475|ref|ZP_03797002.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           Bol26]
 gi|226233271|gb|EEH32023.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           Bol26]
          Length = 282

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +  NVN + E   M E NR Y AN +T++    ++   + ++ +
Sbjct: 238 EASNVNAVKEMVLMIEINRAYEANQKTLQTEDSLLGKLINEIGK 281



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 11 ANSGLAVQSARMQIISENIANAR 33
          A SG+  +  ++  +S N+AN  
Sbjct: 8  AASGMMAERRKLDTVSNNLANID 30


>gi|222112615|ref|YP_002554879.1| flagellar basal body rod protein [Acidovorax ebreus TPSY]
 gi|221732059|gb|ACM34879.1| flagellar basal body rod protein [Acidovorax ebreus TPSY]
          Length = 107

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 30/127 (23%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + A A IA SGL     R+   + N+AN  T G T        + +  ++     GGV+ 
Sbjct: 8   MTALASIARSGLQAAQLRLGTSAHNVANLNTPGFT--------RQVVDQQAAPAQGGVQA 59

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +                      +G    P V +  E  +       + A+L  ++ + +
Sbjct: 60  R----------------------TGRSGQPGVALEAEAVEQMAATYAFKASLLVLRTADE 97

Query: 124 MMTTTLD 130
           M    LD
Sbjct: 98  MAGALLD 104


>gi|24215548|ref|NP_713029.1| flagellar hook protein FlgE [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45657072|ref|YP_001158.1| flagellar hook protein FlgE [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24196693|gb|AAN50047.1| flagellar hook protein FlgE [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45600309|gb|AAS69795.1| FlgE [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
          Length = 464

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  +  DM  T R + AN +TI  S  M+   L L R
Sbjct: 418 AGLLEMSNVDLSDQFTDMIVTQRGFQANSRTITTSDQMIQEVLGLKR 464



 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANART 34
          ++ S +   SGL     RM +I  NI+N  T
Sbjct: 1  MMRSLYSGVSGLKNHQVRMDVIGNNISNVNT 31


>gi|332704823|ref|ZP_08424911.1| flagellar basal-body rod protein FlgG [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554972|gb|EGJ52016.1| flagellar basal-body rod protein FlgG [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 260

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV ++ E   M    R +  N + I  S  M+ T +++ R
Sbjct: 213 AQGFLEGSNVELVDEMVGMIIGQRAFEVNSKAISTSDTMLQTAINVKR 260



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A +G+  Q   +  IS N+AN  T G       +++    FE++M+ +
Sbjct: 1  MMRSLWTAATGMVAQQMNIDTISNNLANVNTIG-------FKKSRAEFEDLMYQT 48


>gi|312126441|ref|YP_003991315.1| fagellar hook-basal body protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776460|gb|ADQ05946.1| fagellar hook-basal body protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 255

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NVN + E  +M    R Y AN +      + +   + ++ R
Sbjct: 207 QGYLEGSNVNSVQEMVNMINVLRAYEANQKAFVIQDETLQKAVNEIAR 254


>gi|83646788|ref|YP_435223.1| flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
 gi|83634831|gb|ABC30798.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
          Length = 254

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NV+++ E  ++    R Y AN   I+ + ++M  T DL
Sbjct: 207 QQGFLESSNVDLVKELVELVTAQRGYQANSHVIRAADEIMQITNDL 252



 Score = 38.0 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 7/48 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          +I + ++A +GL     +++ IS N+AN  T         Y++  ++F
Sbjct: 1  MIDALYVAETGLQAGQKQIETISNNMANLNTVA-------YKKSRVAF 41


>gi|330830301|ref|YP_004393253.1| flagellar basal body rod protein FlgG [Aeromonas veronii B565]
 gi|328805437|gb|AEB50636.1| Flagellar basal body rod protein FlgG [Aeromonas veronii B565]
          Length = 262

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G+++  NVNV  E  ++ +  R+Y  N + +     MM+  + 
Sbjct: 216 KQGMLETSNVNVTEELVNLIQAQRVYEMNSKVLSAVDGMMSFLIQ 260



 Score = 39.5 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 10/58 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    +  I+ +GL  Q   + + S N+ANA T G       +++    FE++++ +
Sbjct: 1  MNP---ALWISKTGLDAQQTNISVTSNNLANASTVG-------FKKSRAIFEDLLYQN 48


>gi|116328901|ref|YP_798621.1| flagellar hook protein FlgE [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330492|ref|YP_800210.1| flagellar hook protein FlgE [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121645|gb|ABJ79688.1| Endoflagellar hook protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124181|gb|ABJ75452.1| Endoflagellar hook protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 464

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  +  DM  T R + AN +TI  S  M+   L L R
Sbjct: 418 AGLLEMSNVDLSDQFTDMIVTQRGFQANSRTITTSDQMIQEVLGLKR 464



 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANART 34
          ++ S +   SGL     RM +I  NI+N  T
Sbjct: 1  MMRSLYSGVSGLKNHQVRMDVIGNNISNVNT 31


>gi|300114797|ref|YP_003761372.1| flagellar basal-body rod protein FlgG [Nitrosococcus watsonii
          C-113]
 gi|299540734|gb|ADJ29051.1| flagellar basal-body rod protein FlgG [Nitrosococcus watsonii
          C-113]
          Length = 261

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  IA +GL  Q  RM  IS N+AN  TTG       ++R    FE++++ +
Sbjct: 1  MNQALWIAKTGLDAQQTRMATISNNLANVNTTG-------FKRDRAVFEDLLYQT 48



 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVNV+ E  +M ET R Y  N + I  + +M+      L
Sbjct: 216 QGALEGANVNVVEELVNMIETQRAYEMNSKAISSTDEMLRFATQTL 261


>gi|229825259|ref|ZP_04451328.1| hypothetical protein GCWU000182_00612 [Abiotrophia defectiva ATCC
           49176]
 gi|229790631|gb|EEP26745.1| hypothetical protein GCWU000182_00612 [Abiotrophia defectiva ATCC
           49176]
          Length = 258

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E  ++    R Y A  + I+ S  +M + ++
Sbjct: 209 QGYIEQSNVNSVREMVNLITITRAYEAGQKMIQSSDSIMESAVN 252



 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S + A +G+  +  RM I++ N+ANA T G
Sbjct: 1  MLRSLYTAYTGMVNEQRRMDIMTNNLANATTAG 33


>gi|292492365|ref|YP_003527804.1| flagellar basal-body rod protein FlgG [Nitrosococcus halophilus
          Nc4]
 gi|291580960|gb|ADE15417.1| flagellar basal-body rod protein FlgG [Nitrosococcus halophilus
          Nc4]
          Length = 261

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  IA +GL  Q  RM +IS N+AN  TTG       ++R    FE++++ +
Sbjct: 1  MNQALWIAKTGLDAQQTRMAVISNNLANVNTTG-------FKRGRAVFEDLLYQT 48



 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVNV+ E  +M ET R Y  N + I  + +M+      L
Sbjct: 216 QGALEGANVNVVEELVNMIETQRAYEMNSKAIAGTDEMLQFATQTL 261


>gi|119947175|ref|YP_944855.1| flagellar basal-body rod protein FlgG [Psychromonas ingrahamii 37]
 gi|119865779|gb|ABM05256.1| flagellar basal-body rod protein FlgG [Psychromonas ingrahamii 37]
          Length = 261

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV V+ E  DM  T R Y  + + +  + +M+
Sbjct: 215 KQGALEGSNVQVVEEMVDMISTQRAYEMSAKMVSAADEML 254



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 10/65 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  I+ +G+A Q A+M  IS N+AN  T G       ++R  + FE++        G
Sbjct: 1  MNSALWISKTGMAAQDAKMTAISNNLANINTVG-------FKRDRVVFEDLFYSIQKQPG 53

Query: 61 VRVKK 65
            V  
Sbjct: 54 ASVDG 58


>gi|57167709|ref|ZP_00366849.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228]
 gi|305433215|ref|ZP_07402371.1| flagellar basal-body rod protein FlgG [Campylobacter coli JV20]
 gi|57020831|gb|EAL57495.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228]
 gi|304443916|gb|EFM36573.1| flagellar basal-body rod protein FlgG [Campylobacter coli JV20]
          Length = 263

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 10/77 (12%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  V  I                     G ++  NV ++ E  D+    R Y A  +
Sbjct: 197 GASGAPVAGIATQDGLGTIRH----------GFIELSNVQLVEEMTDLITGQRAYEAGSK 246

Query: 117 TIKQSHDMMTTTLDLLR 133
            I  S DM+     L R
Sbjct: 247 AITTSDDMLGIVNQLKR 263



 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S H A +G+  Q  ++ + S NIAN  T G
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAG 33


>gi|114706771|ref|ZP_01439671.1| flagellar basal-body rod protein [Fulvimarina pelagi HTCC2506]
 gi|114537719|gb|EAU40843.1| flagellar basal-body rod protein [Fulvimarina pelagi HTCC2506]
          Length = 260

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 10/69 (14%)

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + G  V  +  D       +   H      G ++  NV+ + E +++    R Y  N + 
Sbjct: 195 ASGAPVVGVPGDPG-----YGVVH-----QGYLEDSNVDPVKEISELISAQRAYEMNSKI 244

Query: 118 IKQSHDMMT 126
           I  + +M +
Sbjct: 245 ISAADEMAS 253



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 10/60 (16%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGV 61
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++    + GV
Sbjct: 1  MRALAIAATGMNAQETNVEVIANNIANVNTTG-------FKRARAEFTDLLYQVERAKGV 53


>gi|114566393|ref|YP_753547.1| flagellar hook protein [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337328|gb|ABI68176.1| flagellar hook protein [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 475

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 433 EMSNVDLSEEFTDMIVTQRGFQANSRIITTSDEMIQELVNLKR 475



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM +I  NIAN  T G       Y++  + F++ ++ +
Sbjct: 1  MMRSMYSGVSGLRNHQTRMDVIGNNIANINTAG-------YKKSRVVFQDTLYQT 48


>gi|299531286|ref|ZP_07044696.1| flagellar hook protein FlgE [Comamonas testosteroni S44]
 gi|298720693|gb|EFI61640.1| flagellar hook protein FlgE [Comamonas testosteroni S44]
          Length = 422

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E  +M    R Y AN QTIK    + +T ++L
Sbjct: 376 QSGALEESNVDLTAELVNMMTAQRSYQANAQTIKTQDQVFSTLVNL 421



 Score = 37.6 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          SGL   S  + +I  NIAN+ TTG       ++     F E++  + G
Sbjct: 8  SGLNAASKNLDVIGHNIANSNTTG-------FKASRADFAEMVASAIG 48


>gi|221069322|ref|ZP_03545427.1| flagellar basal body FlaE domain protein [Comamonas testosteroni
           KF-1]
 gi|220714345|gb|EED69713.1| flagellar basal body FlaE domain protein [Comamonas testosteroni
           KF-1]
          Length = 422

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E  +M    R Y AN QTIK    + +T ++L
Sbjct: 376 QSGALEESNVDLTAELVNMMTAQRSYQANAQTIKTQDQVFSTLVNL 421



 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          SGL   S  + +I  NIAN+ TTG       ++     F E++  + G
Sbjct: 8  SGLNAASKNLDVIGHNIANSSTTG-------FKASRADFAEMIASAIG 48


>gi|319405421|emb|CBI79040.1| Flagellar hook protein FlgE [Bartonella sp. AR 15-3]
          Length = 402

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +SG ++  NV++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 355 SSGYLEDSNVDIGDELTDMIEAQRNYTANSKVFQTGSELMDVIVNLKR 402



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 15/69 (21%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------GG 60
               SG+  Q  R+  +++N+AN  T G       Y+R  + F   +  S       GG
Sbjct: 7  MRTGVSGMNAQGTRLSGVADNVANVGTVG-------YKRTNVQFSNYVTPSGQYAYVPGG 59

Query: 61 VRVKKIGVD 69
          V+   IG D
Sbjct: 60 VK-SHIGHD 67


>gi|117619599|ref|YP_857341.1| flagellar basal body rod protein FlgG [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561006|gb|ABK37954.1| flagellar basal-body rod protein FlgG [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 262

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G+++  NVNV  E  ++ +  R+Y  N + +     MM+  + 
Sbjct: 216 KQGMLETSNVNVTEELVNLIQAQRVYEMNSKVLSAVDGMMSFLIQ 260



 Score = 42.2 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 10/58 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    +  I+ +GL  Q   + + S N+ANA T G       Y++    FE++++ +
Sbjct: 1  MNP---ALWISKTGLDAQQTNISVTSNNLANASTVG-------YKKSRAIFEDLLYQN 48


>gi|325289233|ref|YP_004265414.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324964634|gb|ADY55413.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 447

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 29/50 (58%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A +SG ++  NV++  E + M  T R Y AN + I  + +M+ T +++ R
Sbjct: 398 ALSSGTLEMSNVDLSTEFSQMITTQRGYQANSRMITTADEMLETIIEMKR 447



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L +    A SGL     +M +I  NIAN  T         Y+   ++F +++  +
Sbjct: 2  MRALFS----AVSGLQAHQKKMDVIGNNIANVNTVA-------YKASRVTFSDILSQT 48


>gi|149194278|ref|ZP_01871375.1| flagellar basal-body rod protein distal rod protein [Caminibacter
           mediatlanticus TB-2]
 gi|149135453|gb|EDM23932.1| flagellar basal-body rod protein distal rod protein [Caminibacter
           mediatlanticus TB-2]
          Length = 262

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV ++ E  D+    R Y A  + I  S +M+ T  +L R
Sbjct: 216 QGFIEMSNVQLVEEMTDLITGQRAYDAASKAIMTSDEMLQTVNNLKR 262



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A +G+  Q  ++ ++S NI+N  T G       Y+++   F ++ + +
Sbjct: 1  MVRSLYTAATGMMAQQTQIDVVSNNISNVNTIG-------YKKQRAEFADLFYQT 48


>gi|89902477|ref|YP_524948.1| hypothetical protein Rfer_3717 [Rhodoferax ferrireducens T118]
 gi|89347214|gb|ABD71417.1| protein of unknown function DUF1078-like [Rhodoferax ferrireducens
           T118]
          Length = 404

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 27/48 (56%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  SG ++  NV++  E  +M    R Y AN QTIK    +M+T ++L
Sbjct: 356 ALRSGALEESNVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVNL 403



 Score = 41.5 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S     SGL   S  + +I  NIANA TTG
Sbjct: 2  SFQTGLSGLNASSRSLDVIGNNIANANTTG 31


>gi|319898656|ref|YP_004158749.1| flagellar hook protein FlgE [Bartonella clarridgeiae 73]
 gi|319402620|emb|CBI76165.1| Flagellar hook protein FlgE [Bartonella clarridgeiae 73]
          Length = 402

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +SG ++  NV++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 355 SSGYLEDSNVDMGDELTDMIEAQRNYTANSKVFQTGSELMDVIVNLKR 402



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 15/69 (21%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------GG 60
               SG+  Q  R+  +++N+ANA T G       Y+R  + F   +  S       GG
Sbjct: 7  MRTGVSGMNAQGTRLSGVADNVANAGTVG-------YKRTNVQFSNYVTPSGQYAYVPGG 59

Query: 61 VRVKKIGVD 69
          V+   IG D
Sbjct: 60 VK-SHIGHD 67


>gi|89095665|ref|ZP_01168559.1| flagellar basal-body rod protein [Bacillus sp. NRRL B-14911]
 gi|89089411|gb|EAR68518.1| flagellar basal-body rod protein [Bacillus sp. NRRL B-14911]
          Length = 279

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 68  VDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMM 125
            D +   E  D P    A   G ++  NV+      DM    R + AN + ++     M 
Sbjct: 210 EDGAPLAEAVDNPEAGFALQQGFLESSNVDASRTMTDMMTAYRAFEANQKVLQAYDRSME 269

Query: 126 TTTLDLLR 133
               ++ R
Sbjct: 270 KMANEVGR 277


>gi|323706570|ref|ZP_08118123.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534077|gb|EGB23875.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 59

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V+ E  +M    R Y  N + I+ + DM++   +L R
Sbjct: 13  QGFLETSNVQVVNEMVNMIAAQRAYELNSKAIQAADDMLSIANNLRR 59


>gi|299068732|emb|CBJ39971.1| flagellar hook protein FlgE [Ralstonia solanacearum CMR15]
          Length = 401

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R Y AN QTIK    ++ T + +
Sbjct: 359 VEQSNVDLSAELVNMIVAQRSYQANAQTIKTEDTILQTLVSM 400



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 34/108 (31%), Gaps = 16/108 (14%)

Query: 13  SGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           SGL   S  + +I  N+ANA T G         D Y  +++          GV V K+  
Sbjct: 8   SGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVY-ARSLVGASDNQIGQGVDVTKVSQ 66

Query: 69  D--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              Q       +P     N +G  +           D       Y  N
Sbjct: 67  SFTQGNVTVTGNPLDIAINGTGFYR---------MVDASSGQVSYTRN 105


>gi|264676570|ref|YP_003276476.1| FlgE [Comamonas testosteroni CNB-2]
 gi|262207082|gb|ACY31180.1| FlgE [Comamonas testosteroni CNB-2]
          Length = 422

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E  +M    R Y AN QTIK    + +T ++L
Sbjct: 376 QSGALEESNVDLTAELVNMMTAQRSYQANAQTIKTQDQVFSTLVNL 421



 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          SGL   S  + +I  NIAN+ TTG       ++     F E++  + G
Sbjct: 8  SGLNAASKNLDVIGHNIANSNTTG-------FKASRADFAEMVASAIG 48


>gi|17548566|ref|NP_521906.1| flagellar hook protein FlgE [Ralstonia solanacearum GMI1000]
 gi|17430814|emb|CAD17496.1| probable flagellar hook protein flge [Ralstonia solanacearum
           GMI1000]
          Length = 401

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R Y AN QTIK    ++ T + +
Sbjct: 359 VEQSNVDLSAELVNMIVAQRSYQANAQTIKTEDTILQTLVSM 400



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 34/108 (31%), Gaps = 16/108 (14%)

Query: 13  SGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           SGL   S  + +I  N+ANA T G         D Y  +++          GV V K+  
Sbjct: 8   SGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVY-ARSLVGASDNQIGQGVDVTKVSQ 66

Query: 69  D--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              Q       +P     N +G  +           D       Y  N
Sbjct: 67  SFTQGNVTVTGNPLDIAINGTGFYR---------MVDASSGQVSYTRN 105


>gi|303239788|ref|ZP_07326312.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
 gi|302592725|gb|EFL62449.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
          Length = 259

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVNV+ E  +M    R Y +N + I+     +   ++
Sbjct: 209 KQGYLEQSNVNVVNEMINMITVMRAYESNQKVIQALDGTLEKAVN 253



 Score = 38.0 bits (88), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-------RKTISFEEVMH 56
          +I + + +   +   + +M +IS N+AN  T G    +  Y        R+    E  ++
Sbjct: 1  MIRALYTSGWSMNANNKQMDVISNNLANVSTNGYKKDTVVYESFPNALVRRVNDTESTLN 60

Query: 57 GSGGVRVKKIGVDQSTFVEEF 77
           SG V   ++G D       +
Sbjct: 61 PSGKVGDVQLGNDVGQVFTYY 81


>gi|254973919|ref|ZP_05270391.1| flagellar hook protein [Clostridium difficile QCD-66c26]
 gi|255091306|ref|ZP_05320784.1| flagellar hook protein [Clostridium difficile CIP 107932]
 gi|255312963|ref|ZP_05354546.1| flagellar hook protein [Clostridium difficile QCD-76w55]
 gi|255515722|ref|ZP_05383398.1| flagellar hook protein [Clostridium difficile QCD-97b34]
 gi|255648816|ref|ZP_05395718.1| flagellar hook protein [Clostridium difficile QCD-37x79]
 gi|260682035|ref|YP_003213320.1| flagellar hook protein [Clostridium difficile CD196]
 gi|260685633|ref|YP_003216766.1| flagellar hook protein [Clostridium difficile R20291]
 gi|306518931|ref|ZP_07405278.1| flagellar hook protein [Clostridium difficile QCD-32g58]
 gi|260208198|emb|CBA60542.1| flagellar hook protein [Clostridium difficile CD196]
 gi|260211649|emb|CBE01907.1| flagellar hook protein [Clostridium difficile R20291]
          Length = 327

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E  +M   +R + AN + I  S +++   ++L R
Sbjct: 281 QGAIEASNVDIAEEFTEMIIASRSFQANSKIISTSDEILQEIINLKR 327



 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 15/101 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTG---DTPGSDPYRRKTISFEEVMHGS-- 58
           +I + +   SG+     ++ +I  N+ANA TT     +        +T+ +      +  
Sbjct: 1   MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60

Query: 59  --------GGVRVKKIGVD--QSTFVEEFDPGHPVANASGI 89
                    G ++  I  D  Q        P   + +  G 
Sbjct: 61  GTNLGQVGVGSKISSINKDMTQGNVQPTNRPSDLMIDGDGY 101


>gi|16126303|ref|NP_420867.1| flagellar basal body rod protein FlgG [Caulobacter crescentus CB15]
 gi|221235080|ref|YP_002517516.1| flagellar basal body rod protein FlgG [Caulobacter crescentus
           NA1000]
 gi|13637955|sp|Q06172|FLGG_CAUCR RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|13423543|gb|AAK24035.1| flagellar basal-body rod protein FlgG [Caulobacter crescentus CB15]
 gi|220964252|gb|ACL95608.1| flagellar basal-body rod protein flgG [Caulobacter crescentus
           NA1000]
          Length = 262

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +  NV+ + E   +    R Y  N + I  +  M+  T  L
Sbjct: 218 YTEASNVDAVSEITALITAQRAYEMNSKVISTADQMLQATSQL 260



 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +   A SG+A Q   +++IS NIAN  T G       ++R+   F+++++ +
Sbjct: 1  MQALRTAASGMAAQQLNVEVISNNIANMNTVG-------FKRQRAEFQDLLYQT 47


>gi|217076898|ref|YP_002334614.1| flagellar basal-body rod protein FlgF [Thermosipho africanus
           TCF52B]
 gi|217036751|gb|ACJ75273.1| flagellar basal-body rod protein FlgF [Thermosipho africanus
           TCF52B]
          Length = 235

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G V+  NV+++ E   M E NR Y    + +    +++  +++
Sbjct: 186 QGYVEKSNVDIVKEMVKMIEANRHYEVLSKAVTVHDELLNKSIN 229



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSGGVRVKKI 66
          A+ G+     ++  +S NI+NA T G    +  ++    ++  SF+ +      V +K I
Sbjct: 8  ASMGMLADITKLDTLSNNISNAETIGYKADNLAFKTYLEKRLHSFKPMPQEKK-VEIKDI 66

Query: 67 GV 68
          G 
Sbjct: 67 GK 68


>gi|325288803|ref|YP_004264984.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324964204|gb|ADY54983.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 299

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++G ++  NVN+  +  DM  T R + AN + I  S  M+   +DL R
Sbjct: 251 STGCLEMSNVNLSEQFTDMIVTQRGFQANSRVITVSDSMLQELVDLKR 298



 Score = 37.2 bits (86), Expect = 0.86,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL  +   M +I  NIAN  T G       Y+     F  ++  S
Sbjct: 1  MMRSLYSAISGLKNEQIAMDVIGNNIANVNTVG-------YKYSRTGFSTMLSQS 48


>gi|262276415|ref|ZP_06054224.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
           101886]
 gi|262220223|gb|EEY71539.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
           101886]
          Length = 262

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     M++
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISSVDQMLS 256



 Score = 40.3 bits (94), Expect = 0.084,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTVG-------FKKSRAVFEDLFYQN 48


>gi|86750896|ref|YP_487392.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           HaA2]
 gi|86573924|gb|ABD08481.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris HaA2]
          Length = 262

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV V+ E +D+    R Y  N + +  +  M+ +T ++ R
Sbjct: 223 NVEVVTEISDLISAQRAYEMNAKVVSAADQMLQSTSNMYR 262



 Score = 40.7 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + + + A +G+A Q   +Q+IS NIAN RTTG       ++++T  F+++
Sbjct: 1  MRALYTAATGMAAQELNVQVISNNIANMRTTG-------FKKQTAQFQDL 43


>gi|255099422|ref|ZP_05328399.1| flagellar hook protein [Clostridium difficile QCD-63q42]
          Length = 327

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E  +M   +R + AN + I  S +++   ++L R
Sbjct: 281 QGAIEASNVDIAEEFTEMIIASRSFQANSKIISTSDEILQEIINLKR 327



 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 15/101 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTG---DTPGSDPYRRKTISFEEVMHGS-- 58
           +I + +   SG+     ++ +I  N+ANA TT     +        +T+ +      +  
Sbjct: 1   MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60

Query: 59  --------GGVRVKKIGVD--QSTFVEEFDPGHPVANASGI 89
                    G ++  I  D  Q        P   + +  G 
Sbjct: 61  GTNLGQVGVGSKISSINKDMVQGNVQPTNRPSDLMIDGDGY 101


>gi|303240279|ref|ZP_07326798.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
 gi|302592189|gb|EFL61918.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
          Length = 439

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 394 GTLEMSNVDLSTEFTDMIVTQRGFQANSRIITTSDEMLQELVNLKR 439



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  + +      SGL     +M +I  N+AN  T         Y+   ++F+EV   +
Sbjct: 2  MRSMFSGV----SGLRAHQTKMDVIGNNVANVNTVA-------YKSGRVTFQEVFSQT 48


>gi|225181585|ref|ZP_03735026.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1]
 gi|225167693|gb|EEG76503.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1]
          Length = 251

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             G ++  NV  + E   M    R Y  N + ++   DM+   
Sbjct: 201 KQGFLEGSNVQAVQEMVQMLAAMRAYETNQRVVQAQDDMLRKA 243



 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 22/33 (66%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I   + A SG+ V+S R + I+ N+AN+ TTG
Sbjct: 1  MIRGLYTAASGMMVESTRQETITNNLANSETTG 33


>gi|322432975|ref|YP_004210224.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9]
 gi|321165202|gb|ADW70906.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9]
          Length = 263

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV+V+ E  +M    R Y +N + +K + +MM     L +
Sbjct: 216 QQGTLEASNVSVVDEFVEMIVAQRSYESNSRVVKAADEMMQQLNQLSQ 263



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + A SG+  Q   +  I+ N+AN+ TTG       ++++ ++F ++++ +
Sbjct: 1  MIRALYTAASGMTAQQLNLDNIANNLANSSTTG-------FQQRRLAFSDMLYQN 48


>gi|302874614|ref|YP_003843247.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
 gi|307690775|ref|ZP_07633221.1| flagellar basal body rod protein FlgG [Clostridium cellulovorans
           743B]
 gi|302577471|gb|ADL51483.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
          Length = 255

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 5/101 (4%)

Query: 27  ENIA-NARTTGDTPGSDPYR--RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
            N A N   T      +  R   +   F  + + S    +          V+ +   +  
Sbjct: 147 NNFAVNPDGTITVKEGEAARTVGRIPIFNAIGNDSFS-SIADSLYVPKDGVQVYRENNTD 205

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
               G ++  NV++  E  DM  T R +  + + +     M
Sbjct: 206 -ILQGYLENSNVDMSKEMTDMIVTQRAFELSSKVLSTGDQM 245



 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + S +  Q  ++  IS NIAN  TTG       YR    +F ++++ S
Sbjct: 8  SKSSMNAQQNKLDTISNNIANVNTTG-------YRALQSNFSDLVYDS 48


>gi|126697826|ref|YP_001086723.1| flagellar hook protein [Clostridium difficile 630]
 gi|115249263|emb|CAJ67076.1| Flagellar hook protein FlgE (Distal rod protein) [Clostridium
           difficile]
          Length = 327

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E  +M   +R + AN + I  S +++   ++L R
Sbjct: 281 QGAIEASNVDIAEEFTEMIIASRSFQANSKIISTSDEILQEIINLKR 327



 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 21/104 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSG--- 59
           +I + +   SG+     ++ +I  N+ANA TT     S    R T SF + V++ S    
Sbjct: 1   MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSS---ARITDSFYQTVLYASAPTA 57

Query: 60  ------------GVRVKKIGVD--QSTFVEEFDPGHPVANASGI 89
                       G ++  I  D  Q        P   + +  G 
Sbjct: 58  ALGGTNLGQVGVGSKISSINKDMVQGNVQPTNRPSDLMIDGDGY 101


>gi|254712013|ref|ZP_05173824.1| flagellar basal body rod protein FlgG [Brucella ceti M644/93/1]
 gi|254715082|ref|ZP_05176893.1| flagellar basal body rod protein FlgG [Brucella ceti M13/05/1]
 gi|261216792|ref|ZP_05931073.1| flagellar basal-body rod protein FlgG [Brucella ceti M13/05/1]
 gi|261319659|ref|ZP_05958856.1| flagellar basal-body rod protein FlgG [Brucella ceti M644/93/1]
 gi|260921881|gb|EEX88449.1| flagellar basal-body rod protein FlgG [Brucella ceti M13/05/1]
 gi|261292349|gb|EEX95845.1| flagellar basal-body rod protein FlgG [Brucella ceti M644/93/1]
          Length = 241

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ S
Sbjct: 1  MKALTIAATGMNAQQLNLEVIANNIANINTTG-------FKRARAEFTDLLYQS 47


>gi|260768782|ref|ZP_05877716.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
 gi|260616812|gb|EEX41997.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
          Length = 397

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIAN  TTG       ++     F  V +G  +GGV+V 
Sbjct: 2  SFNIALSGLNASNQELNTISNNIANVSTTG-------FKESRTEFGSVYNGQQAGGVQVM 54

Query: 65 KI 66
           I
Sbjct: 55 GI 56



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           ASG+++  NV++  E   +    R Y AN +TI  +  +M + 
Sbjct: 351 ASGVLEGSNVDLTSELVHLMSAQRNYQANTKTITTADQLMMSL 393


>gi|163856435|ref|YP_001630733.1| hypothetical protein Bpet2124 [Bordetella petrii DSM 12804]
 gi|163260163|emb|CAP42465.1| flgE [Bordetella petrii]
          Length = 413

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R Y AN QTIK   ++M   +++
Sbjct: 371 VEASNVDMSKELVNMIVAQRTYQANAQTIKTQDEVMQVLMNM 412



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 10/57 (17%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKI 66
          SGL   +  + +I  NIAN+ T G       ++  T SF +V   S    GV+V  I
Sbjct: 8  SGLNAAAQNLDVIGNNIANSGTVG-------FKSATASFADVYASSRVGLGVKVSAI 57


>gi|283834453|ref|ZP_06354194.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
           29220]
 gi|291070000|gb|EFE08109.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
           29220]
          Length = 261

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV+++ E   M    R Y  N + +  + DM+ 
Sbjct: 215 QDGALEGSNVDIVNEMVAMITVQRAYEMNAKMVSAADDMLQ 255



 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ + + 
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFYQTQ 49


>gi|283953936|ref|ZP_06371465.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794541|gb|EFC33281.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 262

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 10/77 (12%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  V  I                     G ++  NV ++ E  D+    R Y A  +
Sbjct: 196 GASGAPVAGIAGQDGLGTIRH----------GFIELSNVQLVEEMTDLITGQRAYEAGSK 245

Query: 117 TIKQSHDMMTTTLDLLR 133
            I  S DM+     L R
Sbjct: 246 AITTSDDMLGIVNQLKR 262



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 10/70 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
          + S H A +G+  Q  ++ + S NIAN  T G       +++    F ++M+      G 
Sbjct: 1  MRSLHTAATGMVAQQTQIDVTSNNIANVNTAG-------FKKSRAEFADLMYQVMKYAGT 53

Query: 62 RVKKIGVDQS 71
                +  S
Sbjct: 54 STSATTLSPS 63


>gi|260437440|ref|ZP_05791256.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM
           2876]
 gi|292810072|gb|EFF69277.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM
           2876]
          Length = 256

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVNV+ E  +M    R Y ++ + I+     +   ++L +
Sbjct: 209 QGYLESSNVNVVSEMVNMITIARDYESSQKVIQSIDSTLERAVNLGQ 255



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP 43
          ++ + +   +G+  +  R+ ++S N+AN+ TT        
Sbjct: 1  MVRALYTGATGMVNEMKRLDVVSNNLANSATTAYKKEGAT 40


>gi|91976161|ref|YP_568820.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisB5]
 gi|91682617|gb|ABE38919.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB5]
          Length = 262

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 7/62 (11%)

Query: 79  PGHPVANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P    AN  G        ++  NV V+ E +D+    R Y  N + +  +  M+ +T ++
Sbjct: 201 PQDGTANTDGFGDMQQKALEQANVEVVNEISDLIAAQRAYEMNAKVVSAADQMLQSTSNM 260

Query: 132 LR 133
            R
Sbjct: 261 FR 262



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 7/44 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          A +G+A Q   +Q+IS NIAN RTTG       Y+++T +F+++
Sbjct: 7  AATGMAAQELNVQVISNNIANMRTTG-------YKKQTAAFQDL 43


>gi|315180485|gb|ADT87399.1| flagellar hook protein E [Vibrio furnissii NCTC 11218]
          Length = 397

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIAN  TTG       ++     F  V +G  +GGV+V 
Sbjct: 2  SFNIALSGLNASNQELNTISNNIANVSTTG-------FKESRTEFGSVYNGQQAGGVQVM 54

Query: 65 KI 66
           I
Sbjct: 55 GI 56



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           ASG+++  NV++  E   +    R Y AN +TI  +  +M + 
Sbjct: 351 ASGVLEGSNVDLTSELVHLMSAQRNYQANTKTITTADQLMMSL 393


>gi|326204617|ref|ZP_08194473.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
 gi|325985184|gb|EGD46024.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
          Length = 443

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 398 GTLEMSNVDLSREFTDMIVTQRGFQANSRIITTSDEMLQELVNLKR 443



 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  + +      SGL    A+M +I  N+AN  T G       ++   ++F+E+ + +
Sbjct: 2  MRSMFSGV----SGLKAHQAKMDVIGNNVANVNTLG-------FKAGRVTFQEIFNQT 48


>gi|261211320|ref|ZP_05925608.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC341]
 gi|260839275|gb|EEX65901.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC341]
          Length = 262

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256



 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 1  MQPALWVSKTGLDAQQTNITTISNNLANASTIG-------FKKGRAVFEDLFYQN 48


>gi|254780525|ref|YP_003064938.1| flagellar hook protein FlgE [Candidatus Liberibacter asiaticus
          str. psy62]
 gi|254040202|gb|ACT56998.1| flagellar hook protein FlgE [Candidatus Liberibacter asiaticus
          str. psy62]
          Length = 421

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          ++ S   A SG+  QS R+  +S+NIAN  T G       Y+R  I+F  +
Sbjct: 3  ILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVG-------YKRTAIAFSSL 46



 Score = 40.7 bits (95), Expect = 0.077,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  ++ E  R Y  N +  +   D M   + L R
Sbjct: 375 SGALETANVDIASELTELIEAQRNYAVNSKVFQTGSDFMDILISLKR 421


>gi|294500931|ref|YP_003564631.1| flagellar hook protein FlgE [Bacillus megaterium QM B1551]
 gi|294350868|gb|ADE71197.1| flagellar hook protein FlgE [Bacillus megaterium QM B1551]
          Length = 264

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 80  GHPVANASG-IV----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G+P A+ +G +V    +  NV++  E  DM    R + AN + I  S +++   ++L R
Sbjct: 206 GNPGASGTGTLVSSALEMSNVDLSEEFTDMIVAQRGFQANTRIITTSDEILQELVNLKR 264



 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGS-G 59
          ++ S +   SG+     ++ ++  NIAN  T G   G   ++    + ++       + G
Sbjct: 1  MLRSMYSGISGMKNFQTKLDVLGNNIANVNTYGYKKGRTTFQDLVSQQVAGATAPGANRG 60

Query: 60 GVRVKKIG 67
          GV  K++G
Sbjct: 61 GVNAKQVG 68


>gi|218133669|ref|ZP_03462473.1| hypothetical protein BACPEC_01538 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991044|gb|EEC57050.1| hypothetical protein BACPEC_01538 [Bacteroides pectinophilus ATCC
           43243]
          Length = 420

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  DM  T R + AN + I  S  M+   ++L R
Sbjct: 374 SGTIEMSNVDLASEFTDMITTQRGFQANSRIITVSDTMLEELINLKR 420


>gi|254488392|ref|ZP_05101597.1| flagellar basal-body rod protein FlgG [Roseobacter sp. GAI101]
 gi|214045261|gb|EEB85899.1| flagellar basal-body rod protein FlgG [Roseobacter sp. GAI101]
          Length = 261

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 11/65 (16%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMHGSGG 60
          + +  IA +G++ Q  R++ IS N+AN  TTG       Y  +   F     + +  +G 
Sbjct: 1  MRALKIAATGMSAQQMRVETISNNLANMSTTG-------YNARRAEFSDLHYQQLARAGS 53

Query: 61 VRVKK 65
          V    
Sbjct: 54 VSASD 58



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  +V+ + E  ++ E  R Y  N + I  +  MM  T  +
Sbjct: 216 QGYLEDSSVDAVREITELIEAQRGYEMNAKVISAADQMMGATTQI 260


>gi|52841453|ref|YP_095252.1| flagellar basal body rod protein FlgG [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|52628564|gb|AAU27305.1| flagellar basal body rod protein FlgG [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
          Length = 261

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ E  +M +  R Y    ++I+    M+ 
Sbjct: 216 QGSLEASNVNVVEELVNMIQAQRSYEITAKSIQTVDSMLQ 255



 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG 36
          ++ SGL  Q   +  I+ N+AN  TT 
Sbjct: 7  VSKSGLEAQDKNIATIANNLANVNTTA 33


>gi|254521223|ref|ZP_05133278.1| flagellar basal-body rod protein FlgG [Stenotrophomonas sp. SKA14]
 gi|219718814|gb|EED37339.1| flagellar basal-body rod protein FlgG [Stenotrophomonas sp. SKA14]
          Length = 257

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NVNV+ E   M ET R Y  N + I  +  M+
Sbjct: 212 QGALEGSNVNVVEELVSMIETQRAYEMNAKAISTTDSML 250



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 7/51 (13%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
            IA +GL  Q  RM ++S N+AN  TTG       +++   SFE++++  
Sbjct: 1  MWIAKTGLDAQQMRMSVVSNNLANTNTTG-------FKQDRASFEDLLYQQ 44


>gi|154686045|ref|YP_001421206.1| flagellar basal body rod protein FlgG [Bacillus amyloliquefaciens
           FZB42]
 gi|154351896|gb|ABS73975.1| FlgE [Bacillus amyloliquefaciens FZB42]
          Length = 258

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 212 AGYLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 258



 Score = 41.1 bits (96), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 23/93 (24%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK-----K 65
          SG+     ++ +I  NIAN  T G       +++  ++F++++    +GG  V       
Sbjct: 10 SGMKNFQTKLDVIGNNIANVNTVG-------FKKSRVTFKDMISQTVAGGSNVTNSKQIG 62

Query: 66 IGVDQSTFVEEFDPGHPVA---------NASGI 89
          +G   S+       G P A         +  G 
Sbjct: 63 LGAATSSIDVVHSTGAPQATQNKTDLAIDGDGY 95


>gi|148269402|ref|YP_001243862.1| hypothetical protein Tpet_0257 [Thermotoga petrophila RKU-1]
 gi|147734946|gb|ABQ46286.1| protein of unknown function DUF1078 domain protein [Thermotoga
           petrophila RKU-1]
          Length = 623

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E   M    R + AN + I  +  ++   +++ R
Sbjct: 578 GALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQILNELVNIKR 623


>gi|303239789|ref|ZP_07326313.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
 gi|302592726|gb|EFL62450.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
          Length = 265

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V+ E   +    R Y  N + ++ + DM+     L R
Sbjct: 221 YIESSNVQVVEEMVKLIVAQRAYEINSKAVQTADDMLGIANSLKR 265



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++ +   A SG+  Q   + +IS N++N  TT        Y+++ + F+++++
Sbjct: 1  MMRALWTAGSGMTAQQLSVDVISNNLSNVNTTA-------YKKERVEFKDMLY 46


>gi|148554187|ref|YP_001261769.1| flagellar basal body rod protein FlgG [Sphingomonas wittichii RW1]
 gi|148499377|gb|ABQ67631.1| flagellar basal-body rod protein FlgG [Sphingomonas wittichii RW1]
          Length = 262

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NVN++ E  DM ET R Y  N + I  +  M+ 
Sbjct: 223 SNVNIVEELVDMIETQRAYEVNSKMISSTDQMLQ 256



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 7/53 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A+ H+A +GL  Q+ RMQ+I+ N+AN  TTG       ++R   SFE + + +
Sbjct: 4  AALHVARTGLDAQNMRMQVIANNLANVNTTG-------FKRDRASFETLAYQA 49


>gi|323498418|ref|ZP_08103414.1| flagellar basal body rod protein FlgG [Vibrio sinaloensis DSM
           21326]
 gi|323316491|gb|EGA69506.1| flagellar basal body rod protein FlgG [Vibrio sinaloensis DSM
           21326]
          Length = 262

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256



 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       Y++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTVG-------YKKSRAVFEDLFYQN 48


>gi|229826311|ref|ZP_04452380.1| hypothetical protein GCWU000182_01683 [Abiotrophia defectiva ATCC
           49176]
 gi|229789181|gb|EEP25295.1| hypothetical protein GCWU000182_01683 [Abiotrophia defectiva ATCC
           49176]
          Length = 495

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 28/48 (58%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++G+++  NV++  +  DM  T R + AN +TI  +  ++   ++L R
Sbjct: 448 STGMLEMSNVDLAAQFTDMITTQRGFQANSRTITTTDSILEELINLKR 495



 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L +      +GL V   +M +I  NIAN  T G       ++  +  F +V + +
Sbjct: 2  MRSLFSGV----AGLKVHQTKMDVIGNNIANVNTVG-------FKSSSTVFSDVFYQT 48


>gi|54294165|ref|YP_126580.1| flagellar basal body rod protein FlgG [Legionella pneumophila str.
           Lens]
 gi|54297184|ref|YP_123553.1| flagellar basal body rod protein FlgG [Legionella pneumophila str.
           Paris]
 gi|148358808|ref|YP_001250015.1| flagellar basal body rod protein FlgG [Legionella pneumophila str.
           Corby]
 gi|296106853|ref|YP_003618553.1| flagellar basal-body rod protein FlgG [Legionella pneumophila
           2300/99 Alcoy]
 gi|53750969|emb|CAH12380.1| flagellar biosynthesis protein FlgG [Legionella pneumophila str.
           Paris]
 gi|53753997|emb|CAH15468.1| flagellar biosynthesis protein FlgG [Legionella pneumophila str.
           Lens]
 gi|148280581|gb|ABQ54669.1| flagellar basal body rod protein FlgG [Legionella pneumophila str.
           Corby]
 gi|295648754|gb|ADG24601.1| flagellar basal-body rod protein FlgG [Legionella pneumophila
           2300/99 Alcoy]
 gi|307609979|emb|CBW99508.1| flagellar biosynthesis protein FlgG [Legionella pneumophila 130b]
          Length = 261

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ E  +M +  R Y    ++I+    M+ 
Sbjct: 216 QGSLEASNVNVVEELVNMIQAQRSYEITAKSIQTVDSMLQ 255



 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG 36
          ++ SGL  Q   +  I+ N+AN  TT 
Sbjct: 7  VSKSGLEAQDKNIATIANNLANVNTTA 33


>gi|308173591|ref|YP_003920296.1| flagellar hook protein [Bacillus amyloliquefaciens DSM 7]
 gi|307606455|emb|CBI42826.1| flagellar hook protein [Bacillus amyloliquefaciens DSM 7]
 gi|328553477|gb|AEB23969.1| flagellar basal body rod protein FlgG [Bacillus amyloliquefaciens
           TA208]
 gi|328911732|gb|AEB63328.1| flagellar hook protein [Bacillus amyloliquefaciens LL3]
          Length = 258

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 212 AGYLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 258



 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 23/93 (24%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK-----K 65
          SG+     ++ +I  NIAN  T G       +++  ++F++++    +GG  V       
Sbjct: 10 SGMKNFQTKLDVIGNNIANVNTVG-------FKKSRVTFKDMISQTVAGGSNVTNSKQIG 62

Query: 66 IGVDQSTFVEEFDPGHPVA---------NASGI 89
          +G   S+       G P A         +  G 
Sbjct: 63 LGAATSSIDVVHSTGAPQATQNKSDLAIDGDGY 95


>gi|317051987|ref|YP_004113103.1| flagellar basal body rod protein [Desulfurispirillum indicum S5]
 gi|316947071|gb|ADU66547.1| flagellar basal body rod protein [Desulfurispirillum indicum S5]
          Length = 129

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 17/136 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ + + A S +     R    + N+AN  T G       ++ + +  +     SGGVR 
Sbjct: 1   MVDAFYNAASAIKTYGFRQSASAHNVANVNTDG-------FKSQRV--DTAEGVSGGVRP 51

Query: 64  KKIGVDQS--TFVEEFDPGHPV---ANA---SGIVKYPNVNVLVETADMRETNRLYMANL 115
             + +D+S   F     P   V   A+A   +G+V+  N ++  E  +         AN 
Sbjct: 52  TGVSIDKSHGPFRPSEFPADTVSFSADAIAMAGLVEGSNTDITREIVNSSVNQYSVSANT 111

Query: 116 QTIKQSHDMMTTTLDL 131
             I+   +M+ T LD+
Sbjct: 112 GVIRSQDEMIGTLLDI 127


>gi|114320059|ref|YP_741742.1| flagellar basal-body rod protein FlgG [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226453|gb|ABI56252.1| flagellar basal-body rod protein FlgG [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 261

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVN+  E  +M ET R +  N + I  +  M+ 
Sbjct: 216 QGALESSNVNIAEELVNMIETQRAFETNTKAISSTDQMLQ 255



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
          M+    +  +A +GL  Q  RMQ++S N+AN  TTG
Sbjct: 1  MNP---ALWVAKTGLDAQQTRMQVVSNNLANVNTTG 33


>gi|190574261|ref|YP_001972106.1| flagellar basal body rod protein FlgG [Stenotrophomonas maltophilia
           K279a]
 gi|194365678|ref|YP_002028288.1| flagellar basal body rod protein FlgG [Stenotrophomonas maltophilia
           R551-3]
 gi|190012183|emb|CAQ45806.1| putative flagellar basal-body rod protein [Stenotrophomonas
           maltophilia K279a]
 gi|194348482|gb|ACF51605.1| flagellar basal-body rod protein FlgG [Stenotrophomonas maltophilia
           R551-3]
          Length = 261

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NVNV+ E   M ET R Y  N + I  +  M+
Sbjct: 216 QGALEGSNVNVVEELVSMIETQRAYEMNAKAISTTDSML 254



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  IA +GL  Q  RM ++S N+AN  TTG       +++   SFE++++  
Sbjct: 1  MNQALWIAKTGLDAQQMRMSVVSNNLANTNTTG-------FKQDRASFEDLLYQQ 48


>gi|27363703|ref|NP_759231.1| flagellar basal body rod protein FlgG [Vibrio vulnificus CMCP6]
 gi|37679149|ref|NP_933758.1| flagellar basal body rod protein FlgG [Vibrio vulnificus YJ016]
 gi|320157107|ref|YP_004189486.1| flagellar basal-body rod protein FlgG [Vibrio vulnificus MO6-24/O]
 gi|27359819|gb|AAO08758.1| flagellar basal-body rod protein FlgG [Vibrio vulnificus CMCP6]
 gi|37197891|dbj|BAC93729.1| flagellar basal body rod protein FlgG [Vibrio vulnificus YJ016]
 gi|319932419|gb|ADV87283.1| flagellar basal-body rod protein FlgG [Vibrio vulnificus MO6-24/O]
          Length = 262

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISSVDKMMS 256



 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNIATISNNLANASTIG-------FKKGRAVFEDLFYQN 48


>gi|257095359|ref|YP_003169000.1| hypothetical protein CAP2UW1_3821 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047883|gb|ACV37071.1| protein of unknown function DUF1078 domain protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 417

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  DM    R Y AN QTIK    ++ T ++L
Sbjct: 378 SNVDLTKELVDMITAQRNYQANAQTIKTQDQVLQTLVNL 416



 Score = 40.3 bits (94), Expect = 0.095,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S     SGL+  +  + +I  N+ANA T G   G++ +      F   +   G  +V  I
Sbjct: 2  SFQQGLSGLSAAATALNVIGNNVANASTVGFK-GANAHFAD--VFASSLGIVGASQV-GI 57

Query: 67 GVDQSTFVEEFDPGH 81
          GV  S+  ++F  G+
Sbjct: 58 GVGVSSIQQQFTQGN 72


>gi|188991644|ref|YP_001903654.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733404|emb|CAP51605.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 224

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
               +   I    L ++  RM++I+ N++N  T G       Y+ K ++FE  +  + GV
Sbjct: 94  SPFTSFLGIHGDALTLREQRMKLIASNLSNVDTPG-------YKAKDLNFEAALKAAEGV 146

Query: 62  R 62
           R
Sbjct: 147 R 147


>gi|260767767|ref|ZP_05876702.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|260617276|gb|EEX42460.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|315179401|gb|ADT86315.1| flagellar basal body rod protein FlgG [Vibrio furnissii NCTC 11218]
          Length = 262

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 5/50 (10%)

Query: 82  PVANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           P  +  G V+       NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 207 PGLDGLGNVRQSMLESSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256



 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 1  MQPALWVSKTGLDAQQTNIATISNNLANASTVG-------FKKSRAVFEDLFYQN 48


>gi|57237001|ref|YP_178802.1| flagellar basal body rod protein FlgG [Campylobacter jejuni RM1221]
 gi|86149818|ref|ZP_01068047.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|86153387|ref|ZP_01071591.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|88597119|ref|ZP_01100355.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|121613571|ref|YP_001000394.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|148926663|ref|ZP_01810344.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157414985|ref|YP_001482241.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|167005337|ref|ZP_02271095.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|205355540|ref|ZP_03222311.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|218562337|ref|YP_002344116.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|283956107|ref|ZP_06373594.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|57165805|gb|AAW34584.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni RM1221]
 gi|85839636|gb|EAQ56896.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|85843113|gb|EAQ60324.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|87249438|gb|EAQ72398.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|88190808|gb|EAQ94781.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112360043|emb|CAL34835.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|145845182|gb|EDK22277.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157385949|gb|ABV52264.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205346774|gb|EDZ33406.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|283792427|gb|EFC31209.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|284925954|gb|ADC28306.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|307747622|gb|ADN90892.1| Flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315058161|gb|ADT72490.1| Flagellar basal-body rod protein flgG [Campylobacter jejuni subsp.
           jejuni S3]
 gi|315926812|gb|EFV06186.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315931897|gb|EFV10852.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 263

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 10/77 (12%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  V  I                     G ++  NV ++ E  D+    R Y A  +
Sbjct: 197 GASGAPVAGIAGQDGLGTIRH----------GFIELSNVQLVEEMTDLITGQRAYEAGSK 246

Query: 117 TIKQSHDMMTTTLDLLR 133
            I  S DM+     L R
Sbjct: 247 AITTSDDMLGIVNQLKR 263



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S H A +G+  Q  ++ + S NIAN  T G
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAG 33


>gi|315124200|ref|YP_004066204.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315017922|gb|ADT66015.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 263

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 10/77 (12%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  V  I                     G ++  NV ++ E  D+    R Y A  +
Sbjct: 197 GASGAPVAGIAGQDGLGTIRH----------GFIELSNVQLVEEMTDLITGQRAYEAGSK 246

Query: 117 TIKQSHDMMTTTLDLLR 133
            I  S DM+     L R
Sbjct: 247 AITTSDDMLGIVNQLKR 263



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S H A +G+  Q  ++ + S NIAN  T G
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAG 33


>gi|163850063|ref|YP_001638106.1| flagellar basal body rod protein FlgG [Methylobacterium extorquens
           PA1]
 gi|218528666|ref|YP_002419482.1| flagellar basal body rod protein FlgG [Methylobacterium
           chloromethanicum CM4]
 gi|240137197|ref|YP_002961666.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254559209|ref|YP_003066304.1| cell-distal portion of basal-body rod biosynthesis protein
           [Methylobacterium extorquens DM4]
 gi|163661668|gb|ABY29035.1| flagellar basal-body rod protein FlgG [Methylobacterium extorquens
           PA1]
 gi|218520969|gb|ACK81554.1| flagellar basal-body rod protein FlgG [Methylobacterium
           chloromethanicum CM4]
 gi|240007163|gb|ACS38389.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254266487|emb|CAX22251.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens DM4]
          Length = 262

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 18/40 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+ + E   +    R +  N + I+ + +M 
Sbjct: 215 QQGYLEGSNVDPVKEITSLITAQRAFEMNSKVIQAADEMA 254



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
          + +  IA +G++ Q   +++I+ NIAN  TTG
Sbjct: 1  MRALAIAATGMSAQQLNLEVIANNIANLNTTG 32


>gi|293115683|ref|ZP_05792615.2| flagellar hook protein FlgE [Butyrivibrio crossotus DSM 2876]
 gi|292808788|gb|EFF67993.1| flagellar hook protein FlgE [Butyrivibrio crossotus DSM 2876]
          Length = 440

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 11/83 (13%)

Query: 51  FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
           F E ++         IG D +     F P        G+++  NV++  E  DM  T R 
Sbjct: 369 FAETLNSGNF---DGIGDDITEDGGYFSP--------GVLEMSNVDLAAEFTDMITTQRG 417

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y AN + I  S  ++   ++L R
Sbjct: 418 YQANSRIITVSDTLLEELINLKR 440



 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          GL     +M +I  NIAN  T G       ++ ++++F +V + +
Sbjct: 11 GLKTHQTKMDVIGNNIANVNTVG-------FKSQSVTFSDVFYQT 48


>gi|124268254|ref|YP_001022258.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
 gi|124261029|gb|ABM96023.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
          Length = 420

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  +M    R+Y AN QT+K    MM T ++L
Sbjct: 374 QSGALEESNIDLTGELVNMITAQRVYQANAQTVKTQDSMMQTLVNL 419


>gi|46203395|ref|ZP_00051590.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum
          magnetotacticum MS-1]
          Length = 293

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          LI       SG+  QS R+  ++ENI NA TTG       Y+R +  F  ++  SG V  
Sbjct: 3  LIGVLRTGVSGMNAQSNRISTVAENIQNANTTG-------YKRTSAEFSSLLLDSGDVGT 55

Query: 64 KKIGVDQSTFVE 75
             G  ++T   
Sbjct: 56 YNSGAVETTLRR 67


>gi|304407727|ref|ZP_07389378.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
 gi|304343210|gb|EFM09053.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
          Length = 288

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK-QSHDMMTTTLDLLR 133
             G  +  NV+      D+    R Y AN + ++     +     ++ R
Sbjct: 239 KQGYYERSNVDSAQSMVDLMAALRAYEANQKVVQFYDKSLDKAVNEIGR 287



 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++   + A +GL  Q  R   ++ NI+N  T G
Sbjct: 1  MLRGLYTAAAGLTTQQRRHDTVTNNISNINTPG 33


>gi|239907793|ref|YP_002954534.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus
           RS-1]
 gi|239797659|dbj|BAH76648.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus
           RS-1]
          Length = 261

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 26/49 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           A G ++ PNV V+ E   M ET R + A  + +  S+++ T  + +  D
Sbjct: 211 AQGFLEKPNVEVVEEMVSMIETQRTFEAYQKVMSSSNELDTKAIRVGTD 259



 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 8/43 (18%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           L+ ++ R+ I + N+AN  TTG       Y+R  +SFE+  +
Sbjct: 12 ALSTET-RLNISANNLANVNTTG-------YKRDRVSFEDTFY 46


>gi|38570330|gb|AAR24613.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni]
          Length = 263

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 10/77 (12%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  V  I                     G ++  NV ++ E  D+    R Y A  +
Sbjct: 197 GASGAPVAGIAGQDGLGTIRH----------GFIELSNVQLVEEMTDLITGQRAYEAGSK 246

Query: 117 TIKQSHDMMTTTLDLLR 133
            I  S DM+     L R
Sbjct: 247 AITTSDDMLGIVNQLKR 263



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S H A +G+  Q  ++ + S NIAN  T G
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAG 33


>gi|260774940|ref|ZP_05883841.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609195|gb|EEX35353.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256



 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       Y++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTVG-------YKKSRAVFEDLFYQN 48


>gi|258621051|ref|ZP_05716085.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM573]
 gi|258625279|ref|ZP_05720187.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM603]
 gi|262166280|ref|ZP_06034017.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM223]
 gi|262170827|ref|ZP_06038505.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
 gi|258582452|gb|EEW07293.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM603]
 gi|258586439|gb|EEW11154.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM573]
 gi|261891903|gb|EEY37889.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
 gi|262025996|gb|EEY44664.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM223]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256



 Score = 39.5 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 1  MQPALWVSKTGLDAQQTNIATISNNLANASTVG-------FKKGRAVFEDLFYQN 48


>gi|268589980|ref|ZP_06124201.1| flagellar basal-body rod protein FlgG [Providencia rettgeri DSM
           1131]
 gi|291314698|gb|EFE55151.1| flagellar basal-body rod protein FlgG [Providencia rettgeri DSM
           1131]
          Length = 260

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +++  NVNV  E  +M +T R Y  N + +  S  M+     L
Sbjct: 218 MLETSNVNVAEELVNMIQTQRAYEINSKAVSASDQMLQRLTQL 260



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   + +IS N+AN  T G       ++R+   FE++M+ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNG-------FKRQRAVFEDLMYQN 48


>gi|86151551|ref|ZP_01069765.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|85841180|gb|EAQ58428.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 260.94]
          Length = 263

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 10/77 (12%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  V  I                     G ++  NV ++ E  D+    R Y A  +
Sbjct: 197 GASGAPVAGIAGQDGLGTIRH----------GFIELSNVQLVEEMTDLITGQRAYEAGSK 246

Query: 117 TIKQSHDMMTTTLDLLR 133
            I  S DM+     L R
Sbjct: 247 AITTSDDMLGIVNQLKR 263



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S H A +G+  Q  ++ + S NIAN  T G
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAG 33


>gi|170747256|ref|YP_001753516.1| flagellar basal-body rod protein FlgG [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653778|gb|ACB22833.1| flagellar basal-body rod protein FlgG [Methylobacterium
           radiotolerans JCM 2831]
          Length = 263

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 82  PVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P A+  G      ++  NVN + E + +    R Y  N + +  +  M++TT  + R
Sbjct: 206 PGADGFGNLQQSYLEEANVNAVTEISSLIAAQRAYEMNSKVVTAADQMLSTTTQMFR 262



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A +G+A Q   +Q+IS NIAN RTTG       Y+R+ + F+++++ +
Sbjct: 7  AATGMAAQELNVQVISNNIANLRTTG-------YKRQQVHFQDLLYQN 47


>gi|302389667|ref|YP_003825488.1| fagellar hook-basal body protein [Thermosediminibacter oceani DSM
           16646]
 gi|302200295|gb|ADL07865.1| fagellar hook-basal body protein [Thermosediminibacter oceani DSM
           16646]
          Length = 404

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E   M  T R + AN + I  S +M+   +++ R
Sbjct: 359 GSLEMSNVDLAEEFTQMIITQRGFQANSRVITASDEMLQELVNIKR 404



 Score = 40.7 bits (95), Expect = 0.075,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  + +      +GL     +M +I  NIAN  T G       Y++  ++F++ +  +
Sbjct: 2  MRSMFSGV----TGLRNHQIKMDVIGNNIANVNTVG-------YKKSRVTFQDTLSQT 48


>gi|218887603|ref|YP_002436924.1| hypothetical protein DvMF_2517 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758557|gb|ACL09456.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 259

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           A G ++  NV V+ E  +M E  R + A  + ++ +  +    
Sbjct: 209 AQGYLEASNVEVVSEMVNMIEAQRQFEAYQKVMQTTDSIDREA 251



 Score = 40.7 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 7/36 (19%)

Query: 21 RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          RM  IS N+AN  TTG       Y+R  ISF++ M 
Sbjct: 18 RMNNISNNLANVNTTG-------YKRDVISFKDTMQ 46


>gi|254508453|ref|ZP_05120573.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus 16]
 gi|219548663|gb|EED25668.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus 16]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256



 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       Y++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTVG-------YKKSRAVFEDLFYQN 48


>gi|153952075|ref|YP_001398357.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939521|gb|ABS44262.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 263

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 10/77 (12%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  V  I                     G ++  NV ++ E  D+    R Y A  +
Sbjct: 197 GASGAPVAGIAGQDGLGTIRH----------GFIELSNVQLVEEMTDLITGQRAYEAGSK 246

Query: 117 TIKQSHDMMTTTLDLLR 133
            I  S DM+     L R
Sbjct: 247 AITTSDDMLGIVNQLKR 263



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S H A +G+  Q  ++ + S NIAN  T G
Sbjct: 1  MMRSLHTAATGMVAQQMQIDVTSNNIANVNTAG 33


>gi|15642194|ref|NP_231826.1| flagellar basal body rod protein FlgG [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121586257|ref|ZP_01676047.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 2740-80]
 gi|121726538|ref|ZP_01679787.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V52]
 gi|147674573|ref|YP_001217712.1| flagellar basal body rod protein FlgG [Vibrio cholerae O395]
 gi|153213600|ref|ZP_01948873.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 1587]
 gi|153817095|ref|ZP_01969762.1| flagellar basal-body rod protein FlgG [Vibrio cholerae NCTC 8457]
 gi|153820850|ref|ZP_01973517.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33]
 gi|153825330|ref|ZP_01977997.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-2]
 gi|153829351|ref|ZP_01982018.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 623-39]
 gi|183179567|ref|ZP_02957778.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-3]
 gi|227082319|ref|YP_002810870.1| flagellar basal-body rod protein FlgG [Vibrio cholerae M66-2]
 gi|229507728|ref|ZP_04397233.1| flagellar basal-body rod protein FlgG [Vibrio cholerae BX 330286]
 gi|229512077|ref|ZP_04401556.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33]
 gi|229513839|ref|ZP_04403301.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TMA 21]
 gi|229519213|ref|ZP_04408656.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC9]
 gi|229522144|ref|ZP_04411561.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TM 11079-80]
 gi|229524190|ref|ZP_04413595.1| flagellar basal-body rod protein FlgG [Vibrio cholerae bv. albensis
           VL426]
 gi|229528800|ref|ZP_04418190.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 12129(1)]
 gi|229607232|ref|YP_002877880.1| flagellar basal body rod protein FlgG [Vibrio cholerae MJ-1236]
 gi|254225803|ref|ZP_04919408.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V51]
 gi|254849324|ref|ZP_05238674.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MO10]
 gi|255747106|ref|ZP_05421051.1| flagellar basal-body rod protein FlgG [Vibrio cholera CIRS 101]
 gi|262161350|ref|ZP_06030460.1| flagellar basal-body rod protein FlgG [Vibrio cholerae INDRE 91/1]
 gi|262167779|ref|ZP_06035481.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC27]
 gi|262191687|ref|ZP_06049863.1| flagellar basal-body rod protein FlgG [Vibrio cholerae CT 5369-93]
 gi|297580841|ref|ZP_06942766.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC385]
 gi|298500427|ref|ZP_07010232.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MAK 757]
 gi|9656751|gb|AAF95340.1| flagellar basal-body rod protein FlgG [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121549523|gb|EAX59549.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 2740-80]
 gi|121630991|gb|EAX63370.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V52]
 gi|124115799|gb|EAY34619.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 1587]
 gi|125621709|gb|EAZ50038.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V51]
 gi|126512363|gb|EAZ74957.1| flagellar basal-body rod protein FlgG [Vibrio cholerae NCTC 8457]
 gi|126521642|gb|EAZ78865.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33]
 gi|146316456|gb|ABQ20995.1| flagellar basal-body rod protein FlgG [Vibrio cholerae O395]
 gi|148875192|gb|EDL73327.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 623-39]
 gi|149741014|gb|EDM55083.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-2]
 gi|183012978|gb|EDT88278.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-3]
 gi|227010207|gb|ACP06419.1| flagellar basal-body rod protein FlgG [Vibrio cholerae M66-2]
 gi|227014091|gb|ACP10301.1| flagellar basal-body rod protein FlgG [Vibrio cholerae O395]
 gi|229332574|gb|EEN98060.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 12129(1)]
 gi|229337771|gb|EEO02788.1| flagellar basal-body rod protein FlgG [Vibrio cholerae bv. albensis
           VL426]
 gi|229341069|gb|EEO06074.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TM 11079-80]
 gi|229343902|gb|EEO08877.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC9]
 gi|229349020|gb|EEO13977.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TMA 21]
 gi|229352042|gb|EEO16983.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33]
 gi|229355233|gb|EEO20154.1| flagellar basal-body rod protein FlgG [Vibrio cholerae BX 330286]
 gi|229369887|gb|ACQ60310.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MJ-1236]
 gi|254845029|gb|EET23443.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MO10]
 gi|255735508|gb|EET90908.1| flagellar basal-body rod protein FlgG [Vibrio cholera CIRS 101]
 gi|262023844|gb|EEY42543.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC27]
 gi|262028661|gb|EEY47315.1| flagellar basal-body rod protein FlgG [Vibrio cholerae INDRE 91/1]
 gi|262032426|gb|EEY50988.1| flagellar basal-body rod protein FlgG [Vibrio cholerae CT 5369-93]
 gi|297534667|gb|EFH73503.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC385]
 gi|297541120|gb|EFH77174.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MAK 757]
 gi|327484714|gb|AEA79121.1| Flagellar basal-body rod protein FlgG [Vibrio cholerae LMA3894-4]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256



 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 1  MQPALWVSKTGLDAQQTNIATISNNLANASTIG-------FKKGRAVFEDLFYQN 48


>gi|323165587|gb|EFZ51374.1| flagellar basal-body rod protein flgG [Shigella sonnei 53G]
          Length = 143

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|323495375|ref|ZP_08100452.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
           20546]
 gi|323310298|gb|EGA63485.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
           20546]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256



 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       Y++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTVG-------YKKSRAVFEDLFYQN 48


>gi|288574696|ref|ZP_06393053.1| protein of unknown function DUF1078 domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570437|gb|EFC91994.1| protein of unknown function DUF1078 domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           G+++  NVNV+ E   + E  R Y A  + I+ S DM    + 
Sbjct: 215 GVLERSNVNVVEEMVRLIEAQRAYEAASKGIQTSDDMTGQLIT 257


>gi|327441420|dbj|BAK17785.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
          Length = 279

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+V  E  ++ +  R Y  N + I  +  M+
Sbjct: 233 QKGALEMSNVDVSKEMTNLIQAQRSYQFNTRAITIADQML 272



 Score = 33.7 bits (77), Expect = 8.1,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  IS NIAN+ TTG       ++ +  +F E+++  
Sbjct: 19 LDTISTNIANSNTTG-------FKAQQANFTEMLYQQ 48


>gi|188579867|ref|YP_001923312.1| flagellar basal body rod protein FlgG [Methylobacterium populi
           BJ001]
 gi|179343365|gb|ACB78777.1| flagellar basal-body rod protein FlgG [Methylobacterium populi
           BJ001]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 18/40 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+ + E   +    R +  N + I+ + +M 
Sbjct: 215 QQGYLEGSNVDPVKEITSLITAQRAFEMNSKVIQAADEMA 254



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
          + +  IA +G++ Q   +++I+ NIAN  TTG
Sbjct: 1  MRALAIAATGMSAQQLNLEVIANNIANLNTTG 32


>gi|213421404|ref|ZP_03354470.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. E01-6750]
          Length = 197

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|169827129|ref|YP_001697287.1| flagellar basal-body rod protein flgG [Lysinibacillus sphaericus
           C3-41]
 gi|168991617|gb|ACA39157.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Lysinibacillus sphaericus C3-41]
          Length = 322

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G V+  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 277 GTVEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEVLQELVNLKR 322



 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++ S +   SGL     ++ +I  NIAN  T G       +++  + F+++M  + 
Sbjct: 1  MLRSMYSGISGLKNFQTKLDVIGNNIANVNTVG-------FKKGRVLFKDLMSQTQ 49


>gi|333008281|gb|EGK27755.1| flagellar basal-body rod protein flgG [Shigella flexneri K-272]
 gi|333019771|gb|EGK39043.1| flagellar basal-body rod protein flgG [Shigella flexneri K-227]
          Length = 163

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|146305252|ref|YP_001185717.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina ymp]
 gi|145573453|gb|ABP82985.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina ymp]
          Length = 261

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G+++  NV V+    +M    R Y AN + +  +  M  
Sbjct: 215 KQGVLEGSNVQVVEAMVNMIAIQRAYEANAKVLDAASGMQQ 255



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
          + ++  ++ +GLA Q   M  ++ N+AN  TTG       ++   + FE++ +      G
Sbjct: 1  MSSALWVSKTGLAAQDKAMSAVANNLANVNTTG-------FKSDRVVFEDLFYAIELQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +  ++    S    
Sbjct: 54 AQADQVNTVPSGIQL 68


>gi|281411901|ref|YP_003345980.1| fagellar hook-basal body protein [Thermotoga naphthophila RKU-10]
 gi|281373004|gb|ADA66566.1| fagellar hook-basal body protein [Thermotoga naphthophila RKU-10]
          Length = 755

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E   M    R + AN + I  +  ++   +++ R
Sbjct: 710 GALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQILNELVNIKR 755


>gi|119947177|ref|YP_944857.1| flagellar hook protein FlgE [Psychromonas ingrahamii 37]
 gi|119865781|gb|ABM05258.1| flagellar hook protein FlgE [Psychromonas ingrahamii 37]
          Length = 398

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 9/64 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   + ++  IS NIAN  T G       ++     F  + +G  +GGV V 
Sbjct: 2  SFNIAISGLNATNKQLNTISNNIANVSTYG-------FKESRAEFASIYNGGQAGGVEVS 54

Query: 65 KIGV 68
           I  
Sbjct: 55 GITQ 58



 Score = 45.3 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           +++  NV++  E   +    R Y AN +TI  +  + T  L
Sbjct: 355 MLETSNVDLTSELVSLMTAQRNYQANTKTISTADQL-TKAL 394


>gi|85859196|ref|YP_461398.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
 gi|85722287|gb|ABC77230.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
          Length = 260

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 80  GHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G+P  +  G      ++  NVNV+ E   M    R Y  N ++I  + +M++
Sbjct: 202 GNPGEDGLGTTSQRFLEMSNVNVIDEMVKMIVGQRAYEINSKSIVTADNMLS 253



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +I S   A +G+  Q     +++ N+AN  T G       +++    F+++M+ 
Sbjct: 1  MIRSLWTAATGMQAQQVEQDVVANNLANVNTVG-------FKKSRADFQDLMYQ 47


>gi|226939372|ref|YP_002794445.1| flgG [Laribacter hongkongensis HLHK9]
 gi|226714298|gb|ACO73436.1| flgG [Laribacter hongkongensis HLHK9]
          Length = 260

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 80  GHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +P  + +G      ++  NVNV  E  +M +  R Y  N + IK S DM+     L
Sbjct: 204 ANPTNDGTGAIQQTFLEASNVNVTEELVEMIQAQRAYELNSRGIKTSDDMLARLSQL 260



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +I+ +G+     R+ +I+ N+AN  TTG       +++    FE++M+ +
Sbjct: 1  MLRSLYISKTGMDSSQFRLDVITNNLANVNTTG-------FKKGRAVFEDLMYQT 48


>gi|85058013|ref|YP_453715.1| flagellar basal body rod protein FlgG [Sodalis glossinidius str.
          'morsitans']
 gi|84778533|dbj|BAE73310.1| flagellar basal-body rod protein FlgG [Sodalis glossinidius str.
          'morsitans']
          Length = 260

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S  IA +GL  Q   M +IS NIAN  T G       ++R+   FE++++ +
Sbjct: 1  MMRSLMIAKTGLEAQQTNMDVISNNIANVSTMG-------FKRQQAVFEDLLYQT 48



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVNV  E   M +  R Y  N + I  S  M+     L
Sbjct: 222 SNVNVAQELITMIQAQRAYELNSKAISTSDQMLQRLAQL 260


>gi|295688784|ref|YP_003592477.1| flagellar basal-body rod protein FlgG [Caulobacter segnis ATCC
           21756]
 gi|295430687|gb|ADG09859.1| flagellar basal-body rod protein FlgG [Caulobacter segnis ATCC
           21756]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +  NV+ + E   +    R Y  N + I  +  M+ TT  +
Sbjct: 218 YTEASNVDSVSEITALITAQRAYEMNSKVISTADQMLQTTSQM 260



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +   A SG++ Q   +++IS NIAN  T G       ++R+   F+++++ +
Sbjct: 1  MQALRTAASGMSAQQLNVEVISNNIANMNTVG-------FKRQRAEFQDLLYQT 47


>gi|255523696|ref|ZP_05390662.1| protein of unknown function DUF1078 domain protein [Clostridium
           carboxidivorans P7]
 gi|296186699|ref|ZP_06855101.1| flagellar hook-basal body protein [Clostridium carboxidivorans P7]
 gi|255512565|gb|EET88839.1| protein of unknown function DUF1078 domain protein [Clostridium
           carboxidivorans P7]
 gi|296048736|gb|EFG88168.1| flagellar hook-basal body protein [Clostridium carboxidivorans P7]
          Length = 338

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NV++  E  +M   NR + AN + I    +++   ++L R
Sbjct: 292 QGMLEMSNVDLAEEFTNMIIANRAFQANGKIITTGDEILQDLVNLKR 338



 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 37/108 (34%), Gaps = 29/108 (26%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           ++ S     SGL V   ++ +I  NIAN+ TT        Y+ +   FE+++  S     
Sbjct: 1   MLPSMFSGISGLKVNQRKLDVIGNNIANSSTTA-------YKTQRARFEDMVSQSMASAT 53

Query: 60  ----------------GVRVKKIGVD--QSTFVEEFDPGHPVANASGI 89
                           GV++  I     Q +      P     +  G 
Sbjct: 54  GASSKLGGTNPRQVGLGVQLAGIDTSTGQGSMQPTSAPLDVAIDGDGY 101


>gi|153834448|ref|ZP_01987115.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
 gi|156973589|ref|YP_001444496.1| flagellar basal body rod protein FlgG [Vibrio harveyi ATCC
           BAA-1116]
 gi|269961601|ref|ZP_06175963.1| flagellar basal-body rod protein FlgG [Vibrio harveyi 1DA3]
 gi|148869144|gb|EDL68176.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
 gi|156525183|gb|ABU70269.1| hypothetical protein VIBHAR_01292 [Vibrio harveyi ATCC BAA-1116]
 gi|269833642|gb|EEZ87739.1| flagellar basal-body rod protein FlgG [Vibrio harveyi 1DA3]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLEASNVNVTEELVNMIEAQRVYEMNSKVISSVDKMMS 256



 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       Y++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNIATISNNLANASTVG-------YKKSRAVFEDLFYQN 48


>gi|148976396|ref|ZP_01813102.1| flagellar basal body rod protein FlgG [Vibrionales bacterium
           SWAT-3]
 gi|145964219|gb|EDK29475.1| flagellar basal body rod protein FlgG [Vibrionales bacterium
           SWAT-3]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISSVDKMMS 256



 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTIG-------FKKSRAVFEDLFYQN 48


>gi|325291939|ref|YP_004277803.1| flagellar basal body rod protein FlgG [Agrobacterium sp. H13-3]
 gi|325059792|gb|ADY63483.1| flagellar basal body rod protein FlgG [Agrobacterium sp. H13-3]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 5/50 (10%)

Query: 82  PVANASGIVK-----YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           P   + G +K       NV+ + E  D+    R Y  N + I  + +M +
Sbjct: 206 PDDPSYGYIKQSYLEGSNVDAVKEITDLITAQRAYEMNSKVITTADEMAS 255



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       Y+R    F ++++ +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTG-------YKRARAEFTDLLYQT 47


>gi|312882657|ref|ZP_07742394.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369618|gb|EFP97133.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +++  NVNV  E  +M E  R+Y  N + I     MM
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMM 255



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTVG-------FKKSRAVFEDLFYQN 48


>gi|237796175|ref|YP_002863727.1| flagellar hook-associated protein FlgK [Clostridium botulinum Ba4
          str. 657]
 gi|229264184|gb|ACQ55217.1| flagellar hook-associated protein FlgK [Clostridium botulinum Ba4
          str. 657]
          Length = 622

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L  + +I  SG+  Q   +   S NIANA T G       Y R+ +  +  
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANANTEG-------YSRQRVELQTT 47


>gi|220924578|ref|YP_002499880.1| flagellar basal-body rod protein FlgG [Methylobacterium nodulans
           ORS 2060]
 gi|219949185|gb|ACL59577.1| flagellar basal-body rod protein FlgG [Methylobacterium nodulans
           ORS 2060]
          Length = 263

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 80  GHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G+P A   G      ++  NVN + E + +    R Y  N + +  +  M++TT  + R
Sbjct: 204 GNPGAEGFGNLQQSYLEEANVNAVTEISSLIAAQRAYEMNSKVVTAADQMLSTTSQMFR 262



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A +G+A Q   +Q+IS NIAN RTTG       Y+R+   F+++++ +
Sbjct: 7  AATGMAAQELNVQVISNNIANLRTTG-------YKRQQAHFQDLLYQN 47


>gi|188579925|ref|YP_001923370.1| flagellar hook protein FlgE [Methylobacterium populi BJ001]
 gi|179343423|gb|ACB78835.1| flagellar basal body FlaE domain protein [Methylobacterium populi
          BJ001]
          Length = 402

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          LI       SG+  QS R+  ++ENI NA TTG       Y+R +  F  ++  SG V  
Sbjct: 3  LIGVLRTGVSGMNAQSNRISTVAENIQNASTTG-------YKRTSAEFSSLLLDSGDVGN 55

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
             G  ++T       G P+A
Sbjct: 56 YNSGAVETTLRRSVSEGGPIA 76



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV+V  E   M E+  +Y AN +     ++++ T ++L R
Sbjct: 355 KAGALEQSNVDVSTELTTMIESQTVYTANSKVFMTGNELLETLMNLKR 402


>gi|218528727|ref|YP_002419543.1| flagellar hook protein FlgE [Methylobacterium chloromethanicum
          CM4]
 gi|218521030|gb|ACK81615.1| flagellar basal body FlaE domain protein [Methylobacterium
          chloromethanicum CM4]
          Length = 403

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          LI       SG+  QS R+  ++ENI NA TTG       Y+R +  F  ++  SG V  
Sbjct: 3  LIGVLRTGVSGMNAQSNRISTVAENIQNASTTG-------YKRTSAEFSSLLLDSGDVGN 55

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
             G  ++T       G P+A
Sbjct: 56 YNSGAVETTLRRSVSEGGPIA 76



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV+V  E   M E+  +Y AN +     ++++ T ++L R
Sbjct: 356 KAGALEQSNVDVSTELTTMIESQTVYTANSKVFMTGNELLETLMNLKR 403


>gi|309788146|ref|ZP_07682752.1| flagellar basal-body rod flgG domain protein [Shigella
          dysenteriae 1617]
 gi|308923998|gb|EFP69499.1| flagellar basal-body rod flgG domain protein [Shigella
          dysenteriae 1617]
          Length = 82

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|163802601|ref|ZP_02196493.1| polar flagellar FlgG [Vibrio sp. AND4]
 gi|159173684|gb|EDP58503.1| polar flagellar FlgG [Vibrio sp. AND4]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLEASNVNVTEELVNMIEAQRVYEMNSKVISSVDKMMS 256



 Score = 39.9 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNIATISNNLANASTVG-------FKKSRAVFEDLFYQN 48


>gi|168183196|ref|ZP_02617860.1| flagellar hook-associated protein FlgK [Clostridium botulinum Bf]
 gi|182673575|gb|EDT85536.1| flagellar hook-associated protein FlgK [Clostridium botulinum Bf]
          Length = 622

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L  + +I  SG+  Q   +   S NIANA T G       Y R+ +  +  
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANANTEG-------YSRQRVELQTT 47


>gi|86146153|ref|ZP_01064479.1| polar flagellar FlgG [Vibrio sp. MED222]
 gi|218708806|ref|YP_002416427.1| flagellar basal body rod protein FlgG [Vibrio splendidus LGP32]
 gi|85836100|gb|EAQ54232.1| polar flagellar FlgG [Vibrio sp. MED222]
 gi|218321825|emb|CAV17796.1| Flagellar basal-body rod protein flgG [Vibrio splendidus LGP32]
          Length = 262

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLEASNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256



 Score = 38.0 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTIG-------FKKSRAVFEDLFYQN 48


>gi|302392940|ref|YP_003828760.1| flagellar basal-body rod protein FlgF [Acetohalobium arabaticum DSM
           5501]
 gi|302205017|gb|ADL13695.1| flagellar basal-body rod protein FlgF [Acetohalobium arabaticum DSM
           5501]
          Length = 245

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVNV+    +M E  R Y +N + +K     +  T++
Sbjct: 197 QGYLESSNVNVVESMTNMIEATRHYESNQRVVKAYDQSLDKTVN 240



 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 8/87 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-------RKTISFEEVMH 56
          ++   + A SG+     R  II+ N+AN+ T G        +       R+    E +  
Sbjct: 1  MLRGLYTAASGMNASLKRTNIITNNLANSTTPGYKKDQTVNKSFSEMLLRRMPDKEVIGT 60

Query: 57 GSGGVRVKKIGVDQSTFVEEFDPGHPV 83
             G +V +   D S         +P 
Sbjct: 61 AGLGAKVDETVTDFSAG-SVHKTDNPF 86


>gi|170288059|ref|YP_001738297.1| hypothetical protein TRQ2_0255 [Thermotoga sp. RQ2]
 gi|170175562|gb|ACB08614.1| protein of unknown function DUF1078 domain protein [Thermotoga sp.
           RQ2]
          Length = 750

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E   M    R + AN + I  +  ++   +++ R
Sbjct: 705 GALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQILNELVNIKR 750


>gi|118444095|ref|YP_878000.1| flagellar basal body rod protein FlgG [Clostridium novyi NT]
 gi|118134551|gb|ABK61595.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT]
          Length = 258

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G  +  NV++  E AD+  T R +  N   +K + +M     +L
Sbjct: 211 QGYTEQSNVDLGKEMADLIITQRAFQLNSSALKTADEMWGMANNL 255



 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 24/85 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          ++ S   + SG+A +  ++  IS N+AN+ T G       Y+R  + F ++M  +     
Sbjct: 1  MLRSIWNSRSGMAAEMEKLNTISNNMANSTTVG-------YKRVDVKFNDLMQENLDRLG 53

Query: 59 ------------GGVRVKKIGVDQS 71
                       GVR  +I  D S
Sbjct: 54 YPVTKGKPQFTGTGVRATEIERDNS 78


>gi|150390478|ref|YP_001320527.1| hypothetical protein Amet_2716 [Alkaliphilus metalliredigens
          QYMF]
 gi|149950340|gb|ABR48868.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
          metalliredigens QYMF]
          Length = 441

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A SGL     RM  I  NIAN  T G       Y+   ++F+EV   +
Sbjct: 1  MMRSMFSAVSGLQAHQLRMDAIGNNIANVNTVG-------YKGTRVTFQEVFSQT 48



 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  +M  T R + AN + I  S +M+   +++ R
Sbjct: 396 GTLEMSNVDLSREFTNMITTQRGFQANSRIITTSDEMLQEVVNMKR 441


>gi|125975104|ref|YP_001039014.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|256003242|ref|ZP_05428234.1| flagellar basal-body rod protein FlgG [Clostridium thermocellum DSM
           2360]
 gi|281418478|ref|ZP_06249497.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|125715329|gb|ABN53821.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|255992933|gb|EEU03023.1| flagellar basal-body rod protein FlgG [Clostridium thermocellum DSM
           2360]
 gi|281407562|gb|EFB37821.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|316939269|gb|ADU73303.1| flagellar hook-basal body protein [Clostridium thermocellum DSM
           1313]
          Length = 266

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V+ E   +    R Y  N + I+ + +M+    +L R
Sbjct: 222 YLESSNVQVVEEMVKLIVAQRAYEINSKAIQSADEMLGIANNLKR 266



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +   A SG+  Q   + +I+ N++N  TT        Y+++ + F+++++ +
Sbjct: 1  MMRALWTAGSGMTAQQLNVDVIANNLSNVNTTA-------YKKERLEFKDMLYDT 48


>gi|254473478|ref|ZP_05086875.1| flagellar hook protein FlgE [Pseudovibrio sp. JE062]
 gi|211957594|gb|EEA92797.1| flagellar hook protein FlgE [Pseudovibrio sp. JE062]
          Length = 397

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 8/57 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L    + + SG+  QS ++  +++NI+NA T G       Y+R   +F  ++ GSGG
Sbjct: 3  LYGIMNTSVSGMNAQSNKLSTVADNISNANTVG-------YKRYKTAFSSLV-GSGG 51



 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG V+  NV++  E  +M +  R Y AN +    S +++    +L
Sbjct: 352 SGAVEGSNVDLAAELTEMVQAQRTYSANTKVFNASSELLQELNNL 396


>gi|28897555|ref|NP_797160.1| flagellar basal body rod protein FlgG [Vibrio parahaemolyticus RIMD
           2210633]
 gi|91225875|ref|ZP_01260844.1| polar flagellar FlgG [Vibrio alginolyticus 12G01]
 gi|153839683|ref|ZP_01992350.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ3810]
 gi|254230138|ref|ZP_04923533.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|260364613|ref|ZP_05777215.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           K5030]
 gi|260878282|ref|ZP_05890637.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AN-5034]
 gi|260898112|ref|ZP_05906608.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           Peru-466]
 gi|260901956|ref|ZP_05910351.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ4037]
 gi|262394937|ref|YP_003286791.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|269965422|ref|ZP_06179541.1| flagellar basal-body rod protein FlgG [Vibrio alginolyticus 40B]
 gi|5361010|gb|AAD42917.1|U12817_11 polar flagellar FlgG homolog [Vibrio parahaemolyticus]
 gi|28805767|dbj|BAC59044.1| polar flagellar FlgG [Vibrio parahaemolyticus RIMD 2210633]
 gi|91189525|gb|EAS75801.1| polar flagellar FlgG [Vibrio alginolyticus 12G01]
 gi|149746793|gb|EDM57781.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ3810]
 gi|151937331|gb|EDN56194.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|262338531|gb|ACY52326.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|269829901|gb|EEZ84131.1| flagellar basal-body rod protein FlgG [Vibrio alginolyticus 40B]
 gi|308086113|gb|EFO35808.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           Peru-466]
 gi|308090170|gb|EFO39865.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AN-5034]
 gi|308106768|gb|EFO44308.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ4037]
 gi|308115105|gb|EFO52645.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           K5030]
 gi|328473451|gb|EGF44299.1| flagellar basal body rod protein FlgG [Vibrio parahaemolyticus
           10329]
          Length = 262

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLEASNVNVTEELVNMIEAQRVYEMNSKVISSVDKMMS 256



 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       Y++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNIATISNNLANASTVG-------YKKSRAVFEDLFYQN 48


>gi|170742312|ref|YP_001770967.1| flagellar basal body FlaE domain-containing protein
          [Methylobacterium sp. 4-46]
 gi|168196586|gb|ACA18533.1| flagellar basal body FlaE domain protein [Methylobacterium sp.
          4-46]
          Length = 456

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 8/55 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          MD + ++   A SGL  Q+  +  IS NIANA+TTG       YRR   +F +++
Sbjct: 1  MD-VFSAMQTAVSGLQAQAFSLNNISGNIANAQTTG-------YRRIDTTFADLL 47



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G V+  N +   E + +  T + Y AN + +  +  MM+  ++++R
Sbjct: 411 GNVEQSNTDTANEFSKLIITQQAYSANTRVMSTAQQMMSDLVNIIR 456


>gi|183220587|ref|YP_001838583.1| flagellar hook protein FlgE [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910695|ref|YP_001962250.1| flagellar hook protein FlgE [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775371|gb|ABZ93672.1| Endoflagellar hook protein [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779009|gb|ABZ97307.1| Flagellar hook protein FlgE [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 464

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  +  DM  T R + AN +TI  S  M+   L L R
Sbjct: 418 AGLLEMSNVDLSDQFTDMIVTQRGFQANSRTIVTSDQMIQEVLGLKR 464



 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          ++ S +   SGL     RM +I  NI+N  T G       ++ + ++F+++
Sbjct: 1  MMRSLYSGVSGLKNHQVRMDVIGNNISNVNTHG-------FKTERVTFQDM 44


>gi|170737040|ref|YP_001778300.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia
           MC0-3]
 gi|169819228|gb|ACA93810.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia
           MC0-3]
          Length = 261

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV  + E  +M    R Y  N + +  + +MM 
Sbjct: 214 KQGALEGSNVLAVEEMVEMIAAQRTYEMNTKVLSAADNMMQ 254



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 10/62 (16%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRV 63
          +  I+ +G+  Q A++Q I+ N+AN  T G       ++R    FE++ + +    G +V
Sbjct: 4  AMWISKTGIQAQDAKLQAIANNLANVNTVG-------FKRDRAVFEDMFYRAERQPGAQV 56

Query: 64 KK 65
            
Sbjct: 57 SD 58


>gi|126653740|ref|ZP_01725658.1| flagellar hook protein [Bacillus sp. B14905]
 gi|126589704|gb|EAZ83840.1| flagellar hook protein [Bacillus sp. B14905]
          Length = 329

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G V+  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 284 GAVEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEVLQELVNLKR 329



 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++ S +   SGL     ++ +I  NIAN  T G       +++  + F+++M  + 
Sbjct: 8  MLRSMYSGISGLKNFQTKLDVIGNNIANVNTVG-------FKKGRVLFKDLMSQTQ 56


>gi|84388093|ref|ZP_00990989.1| Flagellar basal body rod protein FlgG [Vibrio splendidus 12B01]
 gi|84377160|gb|EAP94030.1| Flagellar basal body rod protein FlgG [Vibrio splendidus 12B01]
          Length = 262

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISSVDKMMS 256



 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTIG-------FKKSRAVFEDLFYQN 48


>gi|295399817|ref|ZP_06809798.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294978220|gb|EFG53817.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 334

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  SG ++  NV++  E  +M    R + AN + I  S +++   ++L
Sbjct: 285 AIQSGALEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVNL 332


>gi|239995124|ref|ZP_04715648.1| flagellar basal-body rod protein FlgF [Alteromonas macleodii ATCC
           27126]
          Length = 247

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NVN + E  DM    R Y   ++ +KQ+ ++ T    LLR
Sbjct: 199 SGMLEGSNVNAVDEMVDMISLQRHYELQVKMMKQAEELDTRGNQLLR 245


>gi|149188068|ref|ZP_01866363.1| polar flagellar FlgG [Vibrio shilonii AK1]
 gi|148838056|gb|EDL54998.1| polar flagellar FlgG [Vibrio shilonii AK1]
          Length = 262

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISSVDKMMS 256



 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       Y++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTIG-------YKKSRAVFEDLFYQN 48


>gi|319898637|ref|YP_004158730.1| flagellar basal-body rod protein flgG (Distal rod protein)
           [Bartonella clarridgeiae 73]
 gi|319402601|emb|CBI76146.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Bartonella clarridgeiae 73]
          Length = 264

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 79  PGHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           PG P  +  G     +++  NV+ + E  ++    R Y  N + I+ S +M 
Sbjct: 205 PGDPKDDGYGSIMQAMLESSNVDPVKEMTELIAAQRSYEMNSKVIQASDEMA 256



 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 7/52 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + S  IA +G+A Q   + +I+ N+AN  TTG       ++R    F ++M+
Sbjct: 3  MKSLSIAATGMAAQQTNLDVIANNMANINTTG-------FKRGRAEFADLMY 47


>gi|21242725|ref|NP_642307.1| flagellar basal body rod protein FlgG [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|78047584|ref|YP_363759.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|294624042|ref|ZP_06702805.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|294665577|ref|ZP_06730858.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|325927973|ref|ZP_08189194.1| flagellar basal-body rod protein FlgG [Xanthomonas perforans
           91-118]
 gi|21108201|gb|AAM36843.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas axonopodis pv. citri str. 306]
 gi|78036014|emb|CAJ23705.1| flagella basal body rod protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|292601661|gb|EFF45635.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292604675|gb|EFF48045.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|325541658|gb|EGD13179.1| flagellar basal-body rod protein FlgG [Xanthomonas perforans
           91-118]
          Length = 261

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NVN + E   M ET R Y  N + I  +  M+
Sbjct: 216 QGALEGSNVNTVEELVSMIETQRAYEMNAKAISTTDSML 254



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  +A +GL  Q  RM +IS N+AN  TTG       ++R   +FE++++  
Sbjct: 1  MNQALWVAKTGLDAQQTRMSVISNNLANTNTTG-------FKRDRAAFEDLLYQQ 48


>gi|213161842|ref|ZP_03347552.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. E00-7866]
          Length = 232

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|325923276|ref|ZP_08184949.1| flagellar basal-body rod protein FlgG [Xanthomonas gardneri ATCC
           19865]
 gi|325546203|gb|EGD17384.1| flagellar basal-body rod protein FlgG [Xanthomonas gardneri ATCC
           19865]
          Length = 261

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NVN + E   M ET R Y  N + I  +  M+
Sbjct: 216 QGALEGSNVNTVEELVSMIETQRAYEMNAKAISTTDSML 254



 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  +A +GL  Q  RM +IS N+AN  TTG       ++R   +FE++++  
Sbjct: 1  MNQALWVAKTGLDAQQTRMSVISNNLANTNTTG-------FKRDRAAFEDLLYQQ 48


>gi|262404538|ref|ZP_06081093.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC586]
 gi|262349570|gb|EEY98708.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC586]
          Length = 262

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     M++
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMLS 256



 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 1  MQPALWVSKTGLDAQQTNIATISNNLANASTIG-------FKKGRAVFEDLFYQN 48


>gi|261253612|ref|ZP_05946185.1| flagellar basal-body rod protein FlgG [Vibrio orientalis CIP
           102891]
 gi|260937003|gb|EEX92992.1| flagellar basal-body rod protein FlgG [Vibrio orientalis CIP
           102891]
          Length = 262

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 219 MLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256



 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +GL  Q   +  IS N+ANA T G       Y++    FE++ + +
Sbjct: 7  VSKTGLDAQQTNISTISNNLANASTVG-------YKKSRAVFEDLFYQN 48


>gi|206603525|gb|EDZ40005.1| Flagellar basal body rod protein [Leptospirillum sp. Group II
          '5-way CG']
          Length = 261

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S   A SG+  Q   + +I+ N+AN  TTG       ++R+  +F+++M+ +
Sbjct: 1  MFRSLWNAASGMEAQQTSLDVITNNLANVNTTG-------FKRQRANFQDLMYQT 48



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NVNV  E  +M    R Y  +   I+  + M+  T  L
Sbjct: 216 QSGFLEASNVNVAEELVNMVIGQRAYQMDATGIRTVNRMLGYTATL 261


>gi|167945179|ref|ZP_02532253.1| hypothetical protein Epers_01140 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 126

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 11/70 (15%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            SGGV     G D +  +             G ++  NVNV+ E  +M ET R Y  N +
Sbjct: 62  ASGGVNTAIPGSDSTGTLM-----------QGALESSNVNVVEELVNMIETQRAYEMNSK 110

Query: 117 TIKQSHDMMT 126
            I  + +M++
Sbjct: 111 AISTTDEMLS 120


>gi|124516715|gb|EAY58223.1| Flagellar basal body rod protein FlgG [Leptospirillum rubarum]
          Length = 261

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S   A SG+  Q   + +I+ N+AN  TTG       ++R+  +F+++M+ +
Sbjct: 1  MFRSLWNAASGMEAQQTSLDVITNNLANVNTTG-------FKRQRANFQDLMYQT 48



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NVNV  E  +M    R Y  +   I+  + M+  T  L
Sbjct: 216 QSGFLEASNVNVAEELVNMVIGQRAYQMDATGIRTVNRMLGYTATL 261


>gi|255305280|ref|ZP_05349452.1| flagellar hook protein [Clostridium difficile ATCC 43255]
          Length = 331

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E  +M   +R + AN + I  S +++   ++L R
Sbjct: 285 QGAIEASNVDIAEEFTEMIIASRSFQANSKIISTSDEILQEIINLKR 331



 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 15/101 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTG---DTPGSDPYRRKTISFEEVMHGS-- 58
           +I + +   SG+     ++ +I  N+ANA TT     +        +T+ +      +  
Sbjct: 1   MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60

Query: 59  --------GGVRVKKIGVD--QSTFVEEFDPGHPVANASGI 89
                    G ++  I  D  Q        P   + +  G 
Sbjct: 61  GTNLGQVGVGSKISSINKDMTQGNVQPTNRPSDLMIDGDGY 101


>gi|327398495|ref|YP_004339364.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
 gi|327181124|gb|AEA33305.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
          Length = 719

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  +M    R + AN ++I  S  M+   L+L R
Sbjct: 675 HLEMSNVDLAEEFTNMIIYERAFQANSRSITTSDQMIQELLNLKR 719


>gi|220930464|ref|YP_002507373.1| hypothetical protein Ccel_3101 [Clostridium cellulolyticum H10]
 gi|220000792|gb|ACL77393.1| protein of unknown function DUF1078 domain protein [Clostridium
           cellulolyticum H10]
          Length = 265

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G  +  NVNV+ E  DM    R Y AN + ++     +   ++
Sbjct: 216 QGFDEQSNVNVIDEMVDMITVMRAYEANQKVLQAQDGTLEKAVN 259



 Score = 36.8 bits (85), Expect = 0.94,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 18/81 (22%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I   + +   +     ++ +I+ N+AN  TT     +  Y+    SF E++        
Sbjct: 1  MIRGLYTSAWSMLANQKKLDVITNNMANVNTTAYKKDTVVYQ----SFPEIL-------T 49

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
          ++I   QS       P +P A
Sbjct: 50 RRINDTQS-------PTNPSA 63


>gi|317153844|ref|YP_004121892.1| flagellar basal-body rod protein FlgG [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944095|gb|ADU63146.1| flagellar basal-body rod protein FlgG [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 260

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A   ++  NV ++ E   +    R Y  N + I  S  M+ T +++ R
Sbjct: 213 AQAFLEGSNVEMVDEMVGLIVGQRAYEINSKAITTSDGMLQTAINIKR 260



 Score = 40.3 bits (94), Expect = 0.085,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A +G+      +  +S N+AN  TTG       +++    FE++M+ +
Sbjct: 1  MMRSLWTAATGMVAMQTHIDTLSNNLANVNTTG-------FKKSRAEFEDLMYQT 48


>gi|167463160|ref|ZP_02328249.1| flagellar basal-body rod protein [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322383080|ref|ZP_08056907.1| flagellar basal-body rod-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152742|gb|EFX45368.1| flagellar basal-body rod-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 297

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G V+  NV+      DM    R Y AN + ++     +  T+ ++ R
Sbjct: 249 QGFVEQSNVDPTQVMVDMMSALRAYEANQKMVQFYDKSLEKTVNEVGR 296



 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++   + A+SG+  Q  +    + NIAN  T G
Sbjct: 1  MLRGLYTASSGMIAQQRKHDTATNNIANMNTPG 33


>gi|195952534|ref|YP_002120824.1| flagellar basal-body rod protein FlgG [Hydrogenobaculum sp.
          Y04AAS1]
 gi|195932146|gb|ACG56846.1| flagellar basal-body rod protein FlgG [Hydrogenobaculum sp.
          Y04AAS1]
          Length = 263

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +   + +G+  Q   + +IS N+AN  T G       Y++    F+++++ +
Sbjct: 1  MFRAMWTSAAGMTAQQQNLDVISNNMANVDTVG-------YKQLQPVFDDLIYQT 48



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG  +  NVN++ E  ++      Y  N + I  ++ M++T  +L
Sbjct: 216 SGYTEASNVNIVNEMVNLIIAENAYQFNSKGITAANTMLSTAANL 260


>gi|226225711|ref|YP_002759817.1| flagellar basal-body rod protein FlgG [Gemmatimonas aurantiaca
           T-27]
 gi|226088902|dbj|BAH37347.1| flagellar basal-body rod protein FlgG [Gemmatimonas aurantiaca
           T-27]
          Length = 262

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV ++ E  +M    R Y  N + IK + +M     ++ R
Sbjct: 220 EGSNVEIVQEMVEMIAAMRAYEINSKAIKTADEMGQIANNIAR 262



 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 11/64 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-G 59
          MD    +   A +G+  Q  R ++I+ N+AN  T G       ++R    FE++++ +  
Sbjct: 1  MDP---ALRAAATGMMAQQTRTEVIAHNLANVNTPG-------FKRSRAHFEDLLYQTVQ 50

Query: 60 GVRV 63
          G +V
Sbjct: 51 GQQV 54


>gi|21231395|ref|NP_637312.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768552|ref|YP_243314.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188991639|ref|YP_001903649.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           campestris str. B100]
 gi|325916945|ref|ZP_08179189.1| flagellar basal-body rod protein FlgG [Xanthomonas vesicatoria ATCC
           35937]
 gi|21113060|gb|AAM41236.1| flagellar biosynthesis, cell-distal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66573884|gb|AAY49294.1| flagellar biosynthesis, cell-distal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. 8004]
 gi|167733399|emb|CAP51600.1| unnamed protein product [Xanthomonas campestris pv. campestris]
 gi|325536848|gb|EGD08600.1| flagellar basal-body rod protein FlgG [Xanthomonas vesicatoria ATCC
           35937]
          Length = 261

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NVN + E   M ET R Y  N + I  +  M+
Sbjct: 216 QGALEGSNVNTVEELVSMIETQRAYEMNAKAISTTDSML 254



 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  +A +GL  Q  RM +IS N+AN  TTG       ++R   +FE++++  
Sbjct: 1  MNQALWVAKTGLDAQQTRMSVISNNLANTNTTG-------FKRDRAAFEDLLYQQ 48


>gi|327441046|dbj|BAK17411.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
          Length = 329

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 283 SGFMEMSNVDLSEEFTEMIVAQRGFQANSRIITTSDEILQELVNLKR 329


>gi|299534778|ref|ZP_07048108.1| flagellar basal-body rod protein flgG [Lysinibacillus fusiformis
           ZC1]
 gi|298729866|gb|EFI70411.1| flagellar basal-body rod protein flgG [Lysinibacillus fusiformis
           ZC1]
          Length = 322

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G V+  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 277 GTVEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEVLQELVNLKR 322


>gi|149203125|ref|ZP_01880096.1| flagellar basal-body rod protein FlgG [Roseovarius sp. TM1035]
 gi|149143671|gb|EDM31707.1| flagellar basal-body rod protein FlgG [Roseovarius sp. TM1035]
          Length = 261

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  ++ E  R Y  N + I  +  M++ T
Sbjct: 216 QGYLEDSSVDPVREITELIEAQRGYELNAKVITAADQMLSAT 257



 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          +    IA +G+A Q  R++ IS N+AN  TTG       Y  +   F ++
Sbjct: 1  MHILKIAATGMAAQQMRVETISNNLANMSTTG-------YNARRAEFADL 43


>gi|327480022|gb|AEA83332.1| flagellar basal body rod protein FlgG [Pseudomonas stutzeri DSM
           4166]
          Length = 261

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NV+V+ E  +M  T R Y  N + I  +  M++
Sbjct: 222 SNVSVVEELVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  ++ +GL+ Q   +  IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MLPALWVSKTGLSAQDMNLTTISNNLANVSTTG-------FKRDRAEFQDLLYQ 47


>gi|240137257|ref|YP_002961726.1| flagellar hook protein FlgE [Methylobacterium extorquens AM1]
 gi|240007223|gb|ACS38449.1| flagellar hook protein FlgE [Methylobacterium extorquens AM1]
          Length = 403

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          LI       SG+  QS R+  ++ENI NA TTG       Y+R +  F  ++  SG V  
Sbjct: 3  LIGVLRTGVSGMNAQSNRISTVAENIQNASTTG-------YKRTSAEFSSLLLDSGDVGN 55

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
             G  ++T       G P+A
Sbjct: 56 YNSGAVETTLRRSVSEGGPIA 76



 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV+V  E   M E+  +Y AN +     ++++ T ++L R
Sbjct: 356 KAGALEQSNVDVSTELTTMIESQTVYTANSKVFMTGNELLETLMNLKR 403


>gi|238919259|ref|YP_002932774.1| flagellar hook protein FlgE [Edwardsiella ictaluri 93-146]
 gi|238868828|gb|ACR68539.1| flagellar hook protein FlgE [Edwardsiella ictaluri 93-146]
          Length = 424

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG V+  NV++  +  DM    R Y +N QTIK    ++ T ++L
Sbjct: 379 SGAVEASNVDLSKQLVDMIVAQRNYQSNAQTIKTQDQILQTLVNL 423



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SG+   S ++ +I  NIAN++T G   GS       ++F ++  GS    GV+V  + 
Sbjct: 6  AISGMNAASTQLDVIGNNIANSQTVGFKSGS-------VTFADMFAGSKIGLGVKVASVD 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|222100886|ref|YP_002535454.1| hypothetical protein CTN_1912 [Thermotoga neapolitana DSM 4359]
 gi|221573276|gb|ACM24088.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
          Length = 759

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E   M    R + AN + I  +  ++   +++ R
Sbjct: 714 GALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQILNELVNIKR 759


>gi|170755438|ref|YP_001782346.1| flagellar hook-associated protein FlgK [Clostridium botulinum B1
          str. Okra]
 gi|169120650|gb|ACA44486.1| flagellar hook-associated protein FlgK [Clostridium botulinum B1
          str. Okra]
          Length = 621

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L  + +I  SG+  Q   +   S NIANA T G       Y R+ +  +  
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANANTEG-------YSRQRVELQTT 47


>gi|146307867|ref|YP_001188332.1| flagellar basal body rod protein FlgG [Pseudomonas mendocina ymp]
 gi|145576068|gb|ABP85600.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina ymp]
          Length = 261

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NV+V+ E  +M  T R Y  N + I  +  M++
Sbjct: 222 SNVSVVEELVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  ++ +GL+ Q   +  IS N+AN  TTG       ++R    FE++++ 
Sbjct: 1  MLPALWVSKTGLSAQDMNLTTISNNLANVATTG-------FKRDRAEFEDLLYQ 47


>gi|163850123|ref|YP_001638166.1| flagellar hook protein FlgE [Methylobacterium extorquens PA1]
 gi|163661728|gb|ABY29095.1| protein of unknown function DUF1078 domain protein
          [Methylobacterium extorquens PA1]
          Length = 403

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          LI       SG+  QS R+  ++ENI NA TTG       Y+R +  F  ++  SG V  
Sbjct: 3  LIGVLRTGVSGMNAQSNRISTVAENIQNASTTG-------YKRTSAEFSSLLLDSGDVGN 55

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
             G  ++T       G P+A
Sbjct: 56 YNSGAVETTLRRSVSEGGPIA 76



 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV+V  E   M E+  +Y AN +     ++++ T ++L R
Sbjct: 356 KAGALEQSNVDVSTELTTMIESQTVYTANSKVFMTGNELLETLMNLKR 403


>gi|148380698|ref|YP_001255239.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. ATCC 3502]
 gi|153932743|ref|YP_001384982.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. ATCC 19397]
 gi|153935679|ref|YP_001388452.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. Hall]
 gi|226950152|ref|YP_002805243.1| flagellar hook-associated protein FlgK [Clostridium botulinum A2
          str. Kyoto]
 gi|148290182|emb|CAL84301.1| flagellar hook-associated protein 1 [Clostridium botulinum A str.
          ATCC 3502]
 gi|152928787|gb|ABS34287.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. ATCC 19397]
 gi|152931593|gb|ABS37092.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. Hall]
 gi|226841472|gb|ACO84138.1| flagellar hook-associated protein FlgK [Clostridium botulinum A2
          str. Kyoto]
          Length = 622

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L  + +I  SG+  Q   +   S NIANA T G       Y R+ +  +  
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANANTEG-------YSRQRVELQTT 47


>gi|289666050|ref|ZP_06487631.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289670510|ref|ZP_06491585.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 261

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NVN + E   M ET R Y  N + I  +  M+
Sbjct: 216 QGALEGSNVNTVEELVSMIETQRAYEMNAKAISTTDSML 254



 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  +A +GL  Q  RM +IS N+AN  TTG       ++R   +FE++++  
Sbjct: 1  MNQALWVAKTGLDAQQTRMSVISNNLANTNTTG-------FKRDRAAFEDLLYQQ 48


>gi|262273529|ref|ZP_06051343.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886]
 gi|262222507|gb|EEY73818.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886]
          Length = 401

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G  +  NV++  E   +      Y AN +TI+ S +M+ 
Sbjct: 357 GAYESSNVDLTEEMVSLMSAQSNYQANAKTIQASQEMVQ 395



 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 7/49 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          S +I  SGL   S ++  IS NI+N  T G       Y+     F++V 
Sbjct: 2  SINIGLSGLRATSDQINTISHNISNVGTVG-------YKSSRTEFQDVY 43


>gi|121601827|ref|YP_989383.1| flagellar hook protein FlgE [Bartonella bacilliformis KC583]
 gi|120614004|gb|ABM44605.1| flagellar hook protein FlgE [Bartonella bacilliformis KC583]
          Length = 404

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 18/94 (19%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------GG 60
           H + SG+  Q  R+  I+EN+ANA T G       Y+R  + F   +  S       GG
Sbjct: 7  MHTSVSGMNAQGKRLSGIAENVANAGTVG-------YKRTNVQFSNYVTPSGDYAYVPGG 59

Query: 61 VRVKKIGVDQS---TFVEEFDPGHPVANASGIVK 91
          V+   +G D S          PG  + N +G  +
Sbjct: 60 VK-SHVGHDISIYGPARATGRPGDAMINGNGFFR 92



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV +  E  DM E+ R Y AN +  +   ++M   ++L R
Sbjct: 358 AGYLEDSNVEMSEELTDMIESQRNYTANSKVFQTGSELMDVIVNLKR 404


>gi|330502736|ref|YP_004379605.1| flagellar basal body rod protein FlgG [Pseudomonas mendocina NK-01]
 gi|328917022|gb|AEB57853.1| flagellar basal body rod protein FlgG [Pseudomonas mendocina NK-01]
          Length = 261

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NV+V+ E  +M  T R Y  N + I  +  M++
Sbjct: 222 SNVSVVEELVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  ++ +GL+ Q   +  IS N+AN  TTG       ++R    FE++++ 
Sbjct: 1  MLPALWVSKTGLSAQDMNLTTISNNLANVATTG-------FKRDRAEFEDLLYQ 47


>gi|239906013|ref|YP_002952752.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
 gi|239795877|dbj|BAH74866.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
          Length = 550

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M  T R + AN +TI     M++  + L R
Sbjct: 508 ETSNVDLATEMVSMILTQRGFEANSKTITTVDSMLSEVIQLKR 550



 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGSGGVRVKKIGV 68
          SGL   S +M  I  N+AN  T G       +         +   V     GVRV  I  
Sbjct: 14 SGLLANSTKMGTIGNNLANVNTYGFKGARTDFMDLMSANVGTAAGVKQIGRGVRVGTIVS 73

Query: 69 DQS 71
          D S
Sbjct: 74 DYS 76


>gi|254559268|ref|YP_003066363.1| flagellar hook protein FlgE [Methylobacterium extorquens DM4]
 gi|254266546|emb|CAX22310.1| flagellar hook protein FlgE [Methylobacterium extorquens DM4]
          Length = 403

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          LI       SG+  QS R+  ++ENI NA TTG       Y+R +  F  ++  SG V  
Sbjct: 3  LIGVLRTGVSGMNAQSNRISTVAENIQNASTTG-------YKRTSAEFSSLLLDSGDVGN 55

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
             G  ++T       G P+A
Sbjct: 56 YNSGAVETTLRRSVSEGGPIA 76



 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV+V  E   M E+  +Y AN +     ++++ T ++L R
Sbjct: 356 KAGALEQSNVDVSTELTTMIESQTVYTANSKVFMTGNELLETLMNLKR 403


>gi|291286229|ref|YP_003503045.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
 gi|290883389|gb|ADD67089.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
          Length = 829

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV++  E  +M  T R + AN + I  S +M+   + L R
Sbjct: 789 SNVDLSTEFVNMITTQRGFQANSRVITTSDEMLQELMSLKR 829



 Score = 37.6 bits (87), Expect = 0.61,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL+V    M ++  NI+N  T G       Y+     FE+++  +
Sbjct: 1  MMRSLYSAISGLSVNQQAMDVLGNNISNVNTVG-------YKSGRAVFEDMLSQT 48


>gi|288962678|ref|YP_003452972.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288914944|dbj|BAI76428.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 261

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            ++  NVNV+ E  ++    R Y  N + I+    M +
Sbjct: 218 YLESSNVNVVQEITELISAQRAYEMNAKVIEAGDQMAS 255



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 7/51 (13%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
            IA++G+  Q   +++IS NIAN  TT        Y+R    F+++M+ +
Sbjct: 4  LSIASTGMMAQQLNVEVISNNIANINTTA-------YKRSRAEFQDLMYQA 47


>gi|239826621|ref|YP_002949245.1| flagellar basal body rod protein FlgG [Geobacillus sp. WCH70]
 gi|239806914|gb|ACS23979.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           WCH70]
          Length = 264

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P AN +G +     +  NV++  E  +M    R + AN + I  S +++   ++L
Sbjct: 206 GAPGANGTGTIVAGTLEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVNL 262


>gi|256003243|ref|ZP_05428235.1| protein of unknown function DUF1078 domain protein [Clostridium
           thermocellum DSM 2360]
 gi|281418479|ref|ZP_06249498.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|255992934|gb|EEU03024.1| protein of unknown function DUF1078 domain protein [Clostridium
           thermocellum DSM 2360]
 gi|281407563|gb|EFB37822.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|316939268|gb|ADU73302.1| flagellar hook-basal body protein [Clostridium thermocellum DSM
           1313]
          Length = 259

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E  +M    R Y AN + ++     +   ++
Sbjct: 210 QGYLEQSNVNSINEMINMITIMRSYEANQKILQAQDGTLEKAVN 253



 Score = 38.0 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I   + +   +   S +M ++S N+AN  TT 
Sbjct: 1  MIRGLYTSGWSMLANSKQMDVVSNNLANVNTTA 33


>gi|152980177|ref|YP_001353111.1| flagellar hook protein FlgE [Janthinobacterium sp. Marseille]
 gi|151280254|gb|ABR88664.1| FlgE flagellar hook protein [Janthinobacterium sp. Marseille]
          Length = 416

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  +M    R+Y AN QTIK    +M T ++L
Sbjct: 374 IEESNVDLTAELVNMITAQRVYQANAQTIKTQDQIMQTLVNL 415



 Score = 37.2 bits (86), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 19/99 (19%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSG--- 59
          S     SGL   S  ++ I  N+AN+ T G       +++  + F       + GSG   
Sbjct: 2  SFQQGLSGLNAASKSLEAIGNNVANSGTVG-------FKQSQVQFADIYASTLSGSGAAQ 54

Query: 60 ---GVRVKKIGV--DQSTFVEEFDPGHPVANASGIVKYP 93
             GV+V ++     Q       +P     N  G  +  
Sbjct: 55 IGIGVQVARVAQLFSQGNIAVSNNPLDMAINGDGFFRMS 93


>gi|311068150|ref|YP_003973073.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
 gi|310868667|gb|ADP32142.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
          Length = 264

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 217 KSGFLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 264



 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 13/59 (22%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------GSGGVRVKK 65
          SG+     ++ +I  NIAN  T G       +++  ++F++++        + G +V  
Sbjct: 10 SGMKNFQTKLDVIGNNIANVNTVG-------FKKSRVTFKDMVSQTIAGGSAAGAQVGG 61


>gi|21231400|ref|NP_637317.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
          campestris str. ATCC 33913]
 gi|66768547|ref|YP_243309.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
          campestris str. 8004]
 gi|21113066|gb|AAM41241.1| flagellar protein [Xanthomonas campestris pv. campestris str.
          ATCC 33913]
 gi|66573879|gb|AAY49289.1| flagellar protein [Xanthomonas campestris pv. campestris str.
          8004]
          Length = 133

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
              +   I    L ++  RM++I+ N++N  T G       Y+ K ++FE  +  + GV
Sbjct: 3  SPFTSFLGIHGDALTLREQRMKLIASNLSNVDTPG-------YKAKDLNFEAALKAAEGV 55

Query: 62 R 62
          R
Sbjct: 56 R 56


>gi|225377359|ref|ZP_03754580.1| hypothetical protein ROSEINA2194_03007 [Roseburia inulinivorans DSM
           16841]
 gi|225210784|gb|EEG93138.1| hypothetical protein ROSEINA2194_03007 [Roseburia inulinivorans DSM
           16841]
          Length = 196

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVNV+ E   M   +R Y A  + I    + +  T++
Sbjct: 147 QQGCIEGSNVNVVDEMVKMITISRAYQAGQKVINTVDETLDKTVN 191


>gi|310816831|ref|YP_003964795.1| flagellar basal-body rod protein FlgG [Ketogulonicigenium vulgare
          Y25]
 gi|308755566|gb|ADO43495.1| flagellar basal-body rod protein FlgG [Ketogulonicigenium vulgare
          Y25]
          Length = 261

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTP 39
          +    IA +G+  Q  R+++IS N+AN  TT   P
Sbjct: 1  MRILDIAATGMLAQQTRVEVISNNLANMNTTAYNP 35



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++   V+ + E  D+    R Y  N + I  +  M+   + +
Sbjct: 216 QGYLEQSTVDAVREVTDLIAAQRGYELNSKVISAADQMLAAMVQI 260


>gi|125975103|ref|YP_001039013.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|125715328|gb|ABN53820.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
          Length = 259

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E  +M    R Y AN + ++     +   ++
Sbjct: 210 QGYLEQSNVNSINEMINMITIMRSYEANQKILQAQDGTLEKAVN 253



 Score = 38.0 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I   + +   +   S +M ++S N+AN  TT 
Sbjct: 1  MIRGLYTSGWSMLANSKQMDVVSNNLANVNTTA 33


>gi|260772276|ref|ZP_05881192.1| flagellar basal-body rod protein FlgG [Vibrio metschnikovii CIP
           69.14]
 gi|260611415|gb|EEX36618.1| flagellar basal-body rod protein FlgG [Vibrio metschnikovii CIP
           69.14]
          Length = 189

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 146 MLESSNVNVTEELVNMIEAQRVYEMNSKVISSVDQMMS 183


>gi|254511992|ref|ZP_05124059.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
          KLH11]
 gi|221535703|gb|EEE38691.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
          KLH11]
          Length = 261

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
          + +  IA +G+  Q  R++ IS N+AN  TTG
Sbjct: 1  MRALKIAATGMTAQQMRVETISNNLANMNTTG 32



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  ++ E  R Y  N + I     MM  T
Sbjct: 216 QGYLEDSSVDAVREVTELIEAQRGYEMNAKVISAVDQMMGAT 257


>gi|319764539|ref|YP_004128476.1| flagellar hook-basal body protein [Alicycliphilus denitrificans BC]
 gi|330826755|ref|YP_004390058.1| flagellar hook-basal body protein [Alicycliphilus denitrificans
           K601]
 gi|317119100|gb|ADV01589.1| flagellar hook-basal body protein [Alicycliphilus denitrificans BC]
 gi|329312127|gb|AEB86542.1| flagellar hook-basal body protein [Alicycliphilus denitrificans
           K601]
          Length = 426

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QTIK    +M+T ++L
Sbjct: 387 SNVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVNL 425



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHGSGGVRVKKIGV 68
          SGL   S  + +I  NIAN+ T G       +     +        +   GV+V  +  
Sbjct: 8  SGLNASSKNLDVIGHNIANSNTVGFKASRTEFASMVATAIGTASTGNAGIGVQVGAVAQ 66


>gi|325288806|ref|YP_004264987.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324964207|gb|ADY54986.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 257

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G V+  NVN+  +   M E  R Y AN + ++ +  ++   + ++ +
Sbjct: 207 KQGYVEESNVNLNAQIVKMLEVVRSYSANQKVVQTNDSLLQKAVNEIGK 255


>gi|326319097|ref|YP_004236769.1| fagellar hook-basal body protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375933|gb|ADX48202.1| fagellar hook-basal body protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 425

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QTIK    +M+T ++L
Sbjct: 386 SNVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVNL 424



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 10/78 (12%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRV 63
          S     SGL   S  + +I  N+AN+ T G       ++     F E++    GS G   
Sbjct: 2  SFQQGLSGLNAASKNLDVIGHNVANSGTVG-------FKASRAEFAEMVANAIGSAGGTN 54

Query: 64 KKIGVDQSTFVEEFDPGH 81
            IGV+ S   ++F+ G+
Sbjct: 55 AGIGVELSAVAQQFNQGN 72


>gi|146281773|ref|YP_001171926.1| flagellar basal body rod protein FlgG [Pseudomonas stutzeri A1501]
 gi|145569978|gb|ABP79084.1| flagellar basal-body rod protein FlgG [Pseudomonas stutzeri A1501]
          Length = 261

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NV+V+ E  +M  T R Y  N + I  +  M++
Sbjct: 222 SNVSVVEELVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 43.4 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  ++ +GL+ Q   +  IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MLPALWVSKTGLSAQDMNLTTISNNLANVSTTG-------FKRDRAEFQDLLYQ 47


>gi|83955135|ref|ZP_00963791.1| putative flagellar hook protein [Sulfitobacter sp. NAS-14.1]
 gi|83840464|gb|EAP79637.1| putative flagellar hook protein [Sulfitobacter sp. NAS-14.1]
          Length = 433

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E  D+ +  R +  N + I    DMM  T  L R
Sbjct: 387 AGALEGSNVDIAQEMTDLIKAQRAFSTNAKVITTVDDMMDETTRLKR 433



 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 11/69 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR---KTISFEEVMHGSGG 60
          + ++     SGL   S  +  ISENIAN+ T G       YRR     ++         G
Sbjct: 3  ISSALQTGVSGLRANSKAVGSISENIANSNTVG-------YRRGFAHMVTTTASGGNGDG 55

Query: 61 V-RVKKIGV 68
          V  V  +  
Sbjct: 56 VLSVNAVEE 64


>gi|329901230|ref|ZP_08272755.1| Flagellar hook protein flgE [Oxalobacteraceae bacterium IMCC9480]
 gi|327549162|gb|EGF33754.1| Flagellar hook protein flgE [Oxalobacteraceae bacterium IMCC9480]
          Length = 407

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R Y AN QTIK    ++ T ++L
Sbjct: 365 VEDSNVDLTAELVNMITAQRFYQANAQTIKTQDQVLQTLVNL 406



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 10/78 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKKIGVD 69
          SGL   S  +++   N+AN+ T G       ++     F +V   S   GG     IG  
Sbjct: 8  SGLNAASKSLEVTGNNVANSSTVG-------FKSAQAQFADVYASSLTGGGASQVGIGTS 60

Query: 70 QSTFVEEFDPGHPVANAS 87
           +T  ++F  G+  A+ +
Sbjct: 61 VATVAQQFTQGNVTASNN 78


>gi|309388845|gb|ADO76725.1| flagellar basal-body rod protein FlgF [Halanaerobium praevalens DSM
           2228]
          Length = 250

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           A G V+  NV ++ E A M +T R Y +N + I    + +   + ++ R
Sbjct: 201 AQGYVEGSNVQIVEEMAKMIKTTRHYESNQKVISSIDESLNKVINEVGR 249


>gi|83944165|ref|ZP_00956621.1| putative flagellar hook protein [Sulfitobacter sp. EE-36]
 gi|83845032|gb|EAP82913.1| putative flagellar hook protein [Sulfitobacter sp. EE-36]
          Length = 433

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E  D+ +  R +  N + I    DMM  T  L R
Sbjct: 387 AGALEGSNVDIAQEMTDLIKAQRAFSTNAKVITTVDDMMDETTRLKR 433



 Score = 35.3 bits (81), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 11/69 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR---KTISFEEVMHGSGG 60
          + ++     SGL   S  +  ISENIAN+ T G       YRR     ++         G
Sbjct: 3  ISSALQTGVSGLRANSKAVGSISENIANSNTVG-------YRRGFAHMVTTTASGGNGDG 55

Query: 61 V-RVKKIGV 68
          V  V  +  
Sbjct: 56 VLSVNAVEE 64


>gi|315497881|ref|YP_004086685.1| flagellar basal-body rod protein flgg [Asticcacaulis excentricus CB
           48]
 gi|315415893|gb|ADU12534.1| flagellar basal-body rod protein FlgG [Asticcacaulis excentricus CB
           48]
          Length = 262

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G  +  NV+ + E   +    R Y  N + IK + +M++ T
Sbjct: 216 QGYTEASNVDAVSEITSLIVAQRAYEMNSKIIKTADEMLSVT 257



 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 33/115 (28%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------ 58
           + +   A +G++ Q   +  IS NIAN  T G       ++++   F+++++ +      
Sbjct: 1   MRALRTATTGMSAQQLNVDTISHNIANMNTVG-------FKKQRAEFQDLLYQNVERMGA 53

Query: 59  ----------------GGVRVKKI--GVDQSTFVEEFDPGHPVANASGI--VKYP 93
                           GGV+   +   + Q +     +P   + +  G   V  P
Sbjct: 54  QSSESGTVVPTGIQVGGGVKTGSVYRILTQGSATRTDNPYDIMVDGRGYFQVLMP 108


>gi|319648038|ref|ZP_08002255.1| FlhP protein [Bacillus sp. BT1B_CT2]
 gi|317389673|gb|EFV70483.1| FlhP protein [Bacillus sp. BT1B_CT2]
          Length = 271

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+V  E  D+  + R Y  N + I     MM
Sbjct: 225 KQGFLESSNVDVSKEMTDLISSQRSYQMNSRAITMGDQMM 264


>gi|332994161|gb|AEF04216.1| flagellar basal-body rod protein FlgF [Alteromonas sp. SN2]
          Length = 247

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NVN + E  +M    R Y   ++ +KQ+ ++      LLR
Sbjct: 199 SGMLEGSNVNAVDEMVNMISLQRHYELQVKMMKQADELDARGNQLLR 245


>gi|120613059|ref|YP_972737.1| hypothetical protein Aave_4423 [Acidovorax citrulli AAC00-1]
 gi|120591523|gb|ABM34963.1| protein of unknown function DUF1078 domain protein [Acidovorax
           citrulli AAC00-1]
          Length = 425

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QTIK    +M+T ++L
Sbjct: 386 SNVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVNL 424



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 10/78 (12%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRV 63
          S     SGL   S  + +I  N+AN+ T G       ++     F E++    GS G   
Sbjct: 2  SFQQGLSGLNAASKNLDVIGHNVANSGTVG-------FKASRAEFAEMVANAIGSAGGTN 54

Query: 64 KKIGVDQSTFVEEFDPGH 81
            IGV+ S   ++F+ G+
Sbjct: 55 AGIGVELSAVAQQFNQGN 72


>gi|87119674|ref|ZP_01075571.1| Flagella basal body rod protein [Marinomonas sp. MED121]
 gi|86165150|gb|EAQ66418.1| Flagella basal body rod protein [Marinomonas sp. MED121]
          Length = 261

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +V+  NVN + E   +    R Y  N + +  +  MM+  + 
Sbjct: 218 MVETSNVNSVEELVSLITAQRGYEMNSKVVSAADGMMSFVIQ 259



 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 28/84 (33%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----------- 58
          ++ +GL+    ++ +IS N+AN  TTG       +++    FE++++ +           
Sbjct: 7  VSKTGLSAMDKQLSVISNNLANVSTTG-------FKKDRAVFEDLLYHTVQQPGGLQSQN 59

Query: 59 ----------GGVRVKKIGVDQST 72
                     GVRV     D S 
Sbjct: 60 TQLPSGLQMGAGVRVSATQKDFSE 83


>gi|226944492|ref|YP_002799565.1| flagellar basal body rod protein [Azotobacter vinelandii DJ]
 gi|226719419|gb|ACO78590.1| Flagellar basal body rod protein [Azotobacter vinelandii DJ]
          Length = 383

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG+V+  NV++  E  ++    R + AN Q++    +++   ++L R
Sbjct: 336 ESGVVEASNVDLTKELVNLIIAQRNFQANAQSVSTQSEVLEQAVNLGR 383



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 10/61 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + ++S NIAN++T G       ++  T  F +V   S    GV+V  + 
Sbjct: 6  ALSGLNAASSNLNVVSNNIANSQTVG-------FKSSTTQFADVYASSRVGLGVQVAGVV 58

Query: 68 V 68
           
Sbjct: 59 Q 59


>gi|226327743|ref|ZP_03803261.1| hypothetical protein PROPEN_01616 [Proteus penneri ATCC 35198]
 gi|225203447|gb|EEG85801.1| hypothetical protein PROPEN_01616 [Proteus penneri ATCC 35198]
          Length = 153

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S  IA +GL  Q   M +IS N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|58426792|gb|AAW75829.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 341

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NVN + E   M ET R Y  N + I  +  M+
Sbjct: 296 QGALEGSNVNTVEELVSMIETQRAYEMNAKAISTTDAML 334



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           +  +  +A +GL  Q  RM +IS N+AN  TTG       ++R   +FE++++  
Sbjct: 81  MNQALWVAKTGLDAQQTRMSVISNNLANTNTTG-------FKRDRAAFEDLLYQQ 128


>gi|323174793|gb|EFZ60408.1| flagellar basal-body rod protein flgG domain protein [Escherichia
          coli LT-68]
          Length = 79

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|308050370|ref|YP_003913936.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
           9799]
 gi|307632560|gb|ADN76862.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
           9799]
          Length = 262

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NVNV  E  +M E+ R+Y  N + I     M+
Sbjct: 217 QGALETSNVNVTEELVNMIESQRIYEMNSKVISTVDQML 255



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  I+ +GL  Q   +  IS N+ANA T G       Y++    FE++++ +
Sbjct: 1  MQPALWISKTGLDAQQTDIATISNNLANASTVG-------YKKSRAIFEDLLYQT 48


>gi|291540627|emb|CBL13738.1| fagellar hook-basal body proteins [Roseburia intestinalis XB6B4]
          Length = 272

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V  E  ++    R Y  N + I  S +M+    +L R
Sbjct: 228 YLEGSNVQVADEMVNLIIAQRAYQLNSKAITTSDEMLEQANNLKR 272



 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 33/69 (47%), Gaps = 7/69 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A +G+  Q + +  IS N++N  T G       Y+++ + F+ +++ +   R 
Sbjct: 1  MMRALYTAATGMIAQQSNVDNISNNLSNVNTVG-------YKQEKMEFKSLLYQTIQTRT 53

Query: 64 KKIGVDQST 72
               ++  
Sbjct: 54 TSANGEEKP 62


>gi|319781665|ref|YP_004141141.1| flagellar hook-basal body protein [Mesorhizobium ciceri biovar
          biserrulae WSM1271]
 gi|317167553|gb|ADV11091.1| flagellar hook-basal body protein [Mesorhizobium ciceri biovar
          biserrulae WSM1271]
          Length = 419

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 7/77 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L        SG+  Q+ R+  +++NIAN+ TTG       Y+R +  F  ++  S G   
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANSDTTG-------YKRSSAEFSTLVMPSTGGAY 55

Query: 64 KKIGVDQSTFVEEFDPG 80
             GV  +      DPG
Sbjct: 56 NSGGVTTTIRQAVSDPG 72



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M    R Y AN +  +   D+M   ++L R
Sbjct: 373 SGALENSNVDIAEELTNMIAAQRSYTANSKVFQTGSDLMDVLVNLKR 419


>gi|134095097|ref|YP_001100172.1| flagellar hook protein FlgE [Herminiimonas arsenicoxydans]
 gi|133739000|emb|CAL62048.1| Flagellar hook protein FlgE [Herminiimonas arsenicoxydans]
          Length = 418

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  +M    R Y AN QTIK    ++ T ++L
Sbjct: 376 IEESNVDLTAELVNMITAQRYYQANAQTIKTQDQILQTLVNL 417



 Score = 33.7 bits (77), Expect = 9.2,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 19/99 (19%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSG--- 59
          S     SGL   S  ++ I  N+AN+ T G       +++  + F       + GSG   
Sbjct: 2  SFQQGLSGLNAASKSLEAIGNNVANSGTVG-------FKQSQVQFADIYASTLSGSGAAQ 54

Query: 60 ---GVRVKKIGV--DQSTFVEEFDPGHPVANASGIVKYP 93
             G ++ ++     Q       +P     N  G  +  
Sbjct: 55 IGIGTQIARVAQLFSQGNITASNNPLDMAINGDGFFRMS 93


>gi|295707199|ref|YP_003600274.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium
           DSM 319]
 gi|294804858|gb|ADF41924.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium
           DSM 319]
          Length = 274

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDL 131
                +PG       G V+  NV+      D+    R + AN + ++     M     ++
Sbjct: 211 PSARNNPGISYQLKQGFVERSNVDAAQSMTDLLTAYRAFEANQKIMQAYDRSMDKAANEI 270

Query: 132 LR 133
            R
Sbjct: 271 GR 272



 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          +    + A +G+  Q  +  +++ NIANA T G        + 
Sbjct: 1  MFKGFYTAAAGMLSQQRQTDLLTNNIANANTPGFKADQGTLKA 43


>gi|153834474|ref|ZP_01987141.1| FlgE [Vibrio harveyi HY01]
 gi|156973586|ref|YP_001444493.1| flagellar hook protein FlgE [Vibrio harveyi ATCC BAA-1116]
 gi|148869170|gb|EDL68202.1| FlgE [Vibrio harveyi HY01]
 gi|156525180|gb|ABU70266.1| hypothetical protein VIBHAR_01289 [Vibrio harveyi ATCC BAA-1116]
          Length = 437

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G+++  N+++  E  D+    R + AN + ++  + +    L +
Sbjct: 392 NGMLEQSNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNILQI 436



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG 36
          ++ SGL+     +   S NIANA T G
Sbjct: 4  VSLSGLSSAQLDLNTTSNNIANANTYG 30


>gi|258622488|ref|ZP_05717510.1| Flagellar hook protein flgE [Vibrio mimicus VM573]
 gi|262173354|ref|ZP_06041031.1| flagellar hook protein FlgE [Vibrio mimicus MB-451]
 gi|258585188|gb|EEW09915.1| Flagellar hook protein flgE [Vibrio mimicus VM573]
 gi|261890712|gb|EEY36699.1| flagellar hook protein FlgE [Vibrio mimicus MB-451]
          Length = 398

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G       ++     F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNKELNTISNNIANASTFG-------FKGSRTEFAAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NV++  E   +    R Y AN +TI     +    
Sbjct: 354 GSLEGSNVDLTSELVSLMTAQRNYQANAKTISTGDKLTQAL 394


>gi|297570292|ref|YP_003691636.1| flagellar basal-body rod protein FlgF [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296926207|gb|ADH87017.1| flagellar basal-body rod protein FlgF [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 244

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            G ++  NVN + E   M +  R Y A  + I+   DM    +
Sbjct: 194 QGFLEKSNVNSVEEMTTMIDLQRSYEAQQKMIQAIDDMDEQAI 236



 Score = 41.1 bits (96), Expect = 0.056,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 7/48 (14%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          +  Q  R+  ++ N+AN  T G       Y++  +SF E+++ +   R
Sbjct: 16 MLAQERRLDQVANNLANVDTAG-------YKKDAVSFWEMLYQANAER 56


>gi|241766920|ref|ZP_04764726.1| flagellar basal body FlaE domain protein [Acidovorax delafieldii
           2AN]
 gi|241362624|gb|EER58472.1| flagellar basal body FlaE domain protein [Acidovorax delafieldii
           2AN]
          Length = 425

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QTIK    +M+T ++L
Sbjct: 386 SNVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVNL 424



 Score = 41.1 bits (96), Expect = 0.059,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 10/78 (12%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRV 63
          S     SGL   S  + +I  NIANA TTG       ++     F E++    GS G   
Sbjct: 2  SFQQGLSGLNASSKNLDVIGHNIANANTTG-------FKASRAEFAEMVASAIGSAGGNN 54

Query: 64 KKIGVDQSTFVEEFDPGH 81
            IGV+ +   ++F  G+
Sbjct: 55 AGIGVETANVAQQFTQGN 72


>gi|296126376|ref|YP_003633628.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
 gi|296018192|gb|ADG71429.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
          Length = 282

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            ++  NVN + E   M E  R Y  N +TI     ++   + ++ R
Sbjct: 236 FLEMSNVNPVNEMVRMIEVQRAYELNSKTISTHDTLVGRVINEVGR 281



 Score = 46.8 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 7/42 (16%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
           SG+  + AR+ +++ N+AN       PG   ++R T+SF+ 
Sbjct: 9  ASGMMAEQARLDVVANNLANVD----KPG---FKRDTVSFKS 43


>gi|269961599|ref|ZP_06175961.1| flagellar hook protein [Vibrio harveyi 1DA3]
 gi|269833640|gb|EEZ87737.1| flagellar hook protein [Vibrio harveyi 1DA3]
          Length = 437

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G+++  N+++  E  D+    R + AN + ++  + +    L +
Sbjct: 392 NGMLEQSNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNILQI 436



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG 36
          ++ SGL+     +   S NIANA T G
Sbjct: 4  VSLSGLSSAQLDLNTTSNNIANANTYG 30


>gi|332140548|ref|YP_004426286.1| flagellar basal body rod protein FlgG [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550570|gb|AEA97288.1| flagellar basal body rod protein FlgG [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 262

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           + G ++  NVNV  E  ++ E+ RLY  N + I     M+   + 
Sbjct: 216 SQGTLETSNVNVTEELVNLIESQRLYEMNSKVISSVDQMLGQVIQ 260



 Score = 37.2 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL      + ++S N+ANA T G       +++    FE++++ +
Sbjct: 7  ISKTGLDAAQTDVAVVSNNLANASTVG-------FKKDRAVFEDLLYQN 48


>gi|332994160|gb|AEF04215.1| flagellar basal body rod protein FlgG [Alteromonas sp. SN2]
          Length = 262

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           A G ++  NVNV  E  ++ E+ RLY  N + I     M+   + 
Sbjct: 216 AQGTLETSNVNVTEELVNLIESQRLYEMNSKVISSVDQMLGQVIQ 260



 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL      + ++S N+ANA T G       +++    FE++++ +
Sbjct: 7  ISKTGLDAAQTDVAVVSNNLANASTVG-------FKKDRAIFEDLLYQN 48


>gi|258625234|ref|ZP_05720146.1| Flagellar hook protein flgE [Vibrio mimicus VM603]
 gi|258582481|gb|EEW07318.1| Flagellar hook protein flgE [Vibrio mimicus VM603]
          Length = 398

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G       ++     F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNKELNTISNNIANASTFG-------FKGSRTEFAAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NV++  E   +    R Y AN +TI     +    
Sbjct: 354 GSLEGSNVDLTSELVSLMTAQRNYQANAKTISTGDKLTQAL 394


>gi|23092312|gb|AAN08637.1| FlgB [Aeromonas hydrophila]
          Length = 132

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 53/133 (39%), Gaps = 20/133 (15%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I    L+V+S R +++S NIANA T G       ++ + I+F + +  +   +   
Sbjct: 7   KAFGIHQYALSVRSKRAEVLSSNIANADTPG-------FKARDINFSQALEEAQHQQGFG 59

Query: 66  IG---------VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           +             +  + ++   +P+   +G      V+V  E ++    +  Y  +L+
Sbjct: 60  LATTSEKHFALQSDAPGLTQY--RNPLQPDTG--DGNTVDVQQERSEFLRNSLEYQTSLE 115

Query: 117 TIKQSHDMMTTTL 129
            +      +   L
Sbjct: 116 FMNSKISGLLKAL 128


>gi|83589631|ref|YP_429640.1| hypothetical protein Moth_0779 [Moorella thermoacetica ATCC 39073]
 gi|83572545|gb|ABC19097.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
          Length = 275

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  DM  T R + AN +TI  S  M+   ++L R
Sbjct: 233 EMSNVDLAQEFTDMIITERGFQANARTITTSDQMLQELVNLKR 275



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM +I +NIAN  T G       ++R  ++F++V + +
Sbjct: 1  MMRSLYSGVSGLRTHQTRMDVIGDNIANVNTVG-------FKRSAVTFKDVFYQT 48


>gi|239995123|ref|ZP_04715647.1| flagellar basal body rod protein FlgG [Alteromonas macleodii ATCC
           27126]
          Length = 262

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           + G ++  NVNV  E  ++ E+ RLY  N + I     M+   + 
Sbjct: 216 SQGTLETSNVNVTEELVNLIESQRLYEMNSKVISSVDQMLGQVIQ 260



 Score = 37.2 bits (86), Expect = 0.74,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL      + ++S N+ANA T G       +++    FE++++ +
Sbjct: 7  ISKTGLDAAQTDVAVVSNNLANASTVG-------FKKDRAVFEDLLYQN 48


>gi|240144760|ref|ZP_04743361.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis
           L1-82]
 gi|257203281|gb|EEV01566.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis
           L1-82]
 gi|291534610|emb|CBL07722.1| fagellar hook-basal body proteins [Roseburia intestinalis M50/1]
          Length = 272

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V  E  ++    R Y  N + I  S +M+    +L R
Sbjct: 228 YLEGSNVQVADEMVNLIIAQRAYQLNSKAITTSDEMLEQANNLKR 272



 Score = 37.2 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 33/69 (47%), Gaps = 7/69 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A +G+  Q + +  IS N++N  T G       Y+++ + F+ +++ +   R 
Sbjct: 1  MMRALYTAATGMIAQQSNVDNISNNLSNVNTVG-------YKQEKMEFKSLLYQTIQTRT 53

Query: 64 KKIGVDQST 72
               ++  
Sbjct: 54 TSANGEEKP 62


>gi|52787553|ref|YP_093382.1| FlhP [Bacillus licheniformis ATCC 14580]
 gi|163119681|ref|YP_080952.2| flagellar hook-basal body protein [Bacillus licheniformis ATCC
           14580]
 gi|52350055|gb|AAU42689.1| FlhP [Bacillus licheniformis ATCC 14580]
 gi|145903191|gb|AAU25314.2| flagellar hook-basal body protein [Bacillus licheniformis ATCC
           14580]
          Length = 275

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV+V  E  D+  + R Y  N + I     MM
Sbjct: 229 KQGFLESSNVDVSKEMTDLISSQRSYQMNSRAITMGDQMM 268


>gi|269792758|ref|YP_003317662.1| hypothetical protein Taci_1148 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100393|gb|ACZ19380.1| protein of unknown function DUF1078 domain protein
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 263

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 79  PGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           P    A   A G ++  NVNV+ E   M E NR Y A  +T+    ++ +  
Sbjct: 204 PEDVEAPKLAVGFLERSNVNVVEEMTKMIEANRAYEAAAKTVTIQDELSSRL 255



 Score = 35.3 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 7/47 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          +    +   S + VQ   + ++  N+AN  T+G       +R +   
Sbjct: 1  MFRGIYAGTSAMLVQEKMLDVVGNNLANVDTSG-------FRARIAV 40


>gi|262396029|ref|YP_003287882.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
 gi|262339623|gb|ACY53417.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
          Length = 457

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 32/90 (35%), Gaps = 16/90 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GV 61
          +IA SGL      + + ++N+AN  T G       Y R+      V  G         GV
Sbjct: 5  NIALSGLGANRVALDVTAQNVANVNTVG-------YSRQQALMASVDDGKANRLSPGLGV 57

Query: 62 RVKKIGVDQSTF--VEEFDPGHPVANASGI 89
           V  I      F   + +      A ASG 
Sbjct: 58 EVTSIRRVTDQFLIKQTWSTNSMAAYASGY 87


>gi|222112272|ref|YP_002554536.1| flagellar basal body flae domain-containing protein [Acidovorax
           ebreus TPSY]
 gi|221731716|gb|ACM34536.1| flagellar basal body FlaE domain protein [Acidovorax ebreus TPSY]
          Length = 531

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QTIK    +M+T ++L
Sbjct: 492 SNVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVNL 530



 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 10/72 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV---KKIGVD 69
          SGL   +  + +I  NIAN+ TTG       ++     F  ++  + G        IGV+
Sbjct: 8  SGLNASAKNLDVIGHNIANSNTTG-------FKASRTEFAAMIASAIGAASGTNSGIGVE 60

Query: 70 QSTFVEEFDPGH 81
           S   ++F+ G+
Sbjct: 61 VSAIAQQFNQGN 72


>gi|91224193|ref|ZP_01259456.1| putative flagellar hook-associated protein [Vibrio alginolyticus
          12G01]
 gi|91191104|gb|EAS77370.1| putative flagellar hook-associated protein [Vibrio alginolyticus
          12G01]
          Length = 457

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 32/90 (35%), Gaps = 16/90 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GV 61
          +IA SGL      + + ++N+AN  T G       Y R+      V  G         GV
Sbjct: 5  NIALSGLGANRVALDVTAQNVANVNTVG-------YSRQQALMASVDDGKANRLSPGLGV 57

Query: 62 RVKKIGVDQSTF--VEEFDPGHPVANASGI 89
           V  I      F   + +      A ASG 
Sbjct: 58 EVTSIRRVTDQFLIKQTWSTNSMAAYASGY 87


>gi|75675314|ref|YP_317735.1| flagellar basal body rod protein FlgG [Nitrobacter winogradskyi
           Nb-255]
 gi|74420184|gb|ABA04383.1| Protein of unknown function DUF1078 [Nitrobacter winogradskyi
           Nb-255]
          Length = 262

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 7/57 (12%)

Query: 84  ANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           AN  G        ++  NV V+ E +D+    R Y  N + I  +  M+ +   L R
Sbjct: 206 ANLDGFGDMQQSNLEQANVEVVSEISDLIAAQRAYEMNAKVISAADQMLQSAAALFR 262



 Score = 41.5 bits (97), Expect = 0.040,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + + + A +G+A Q   +Q+IS NIAN RTTG       Y+++  +F+++
Sbjct: 1  MRALYTAATGMAAQELNVQVISNNIANLRTTG-------YKKQRAAFQDL 43


>gi|39912|emb|CAA39528.1| unnamed protein product [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 264

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 215 ALKSGFLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 264



 Score = 36.8 bits (85), Expect = 0.94,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          SG+     ++ +I  NIAN  T G       +++  ++F++++  +
Sbjct: 10 SGMKNFQTKLDVIGNNIANVNTVG-------FKKSRVTFKDMVSQT 48


>gi|254227989|ref|ZP_04921419.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
 gi|151939485|gb|EDN58313.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
          Length = 457

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 32/90 (35%), Gaps = 16/90 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GV 61
          +IA SGL      + + ++N+AN  T G       Y R+      V  G         GV
Sbjct: 5  NIALSGLGANRVALDVTAQNVANVNTVG-------YSRQQALMASVDDGKANRLSPGLGV 57

Query: 62 RVKKIGVDQSTF--VEEFDPGHPVANASGI 89
           V  I      F   + +      A ASG 
Sbjct: 58 EVTSIRRVTDQFLIKQTWSTNSMAAYASGY 87


>gi|203284204|ref|YP_002221944.1| flagellar hook protein [Borrelia duttonii Ly]
 gi|201083647|gb|ACH93238.1| flagellar hook protein [Borrelia duttonii Ly]
          Length = 441

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 395 SGVLEMSNVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 439



 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 18/75 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          ++ S +   SGL     RM ++  NI+N  T G       +++  ++F++++        
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNISNVNTVG-------FKKGRVNFQDMISQSISGAS 53

Query: 56 ---HGSGGVRVKKIG 67
              G GGV  K+IG
Sbjct: 54 RPTDGRGGVNPKQIG 68


>gi|149912834|ref|ZP_01901368.1| flagellar basal-body rod protein FlgG [Roseobacter sp. AzwK-3b]
 gi|149813240|gb|EDM73066.1| flagellar basal-body rod protein FlgG [Roseobacter sp. AzwK-3b]
          Length = 261

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
          + +  IA +G+  Q  R++ IS N+AN  TTG
Sbjct: 1  MRALKIAATGMTAQQLRVETISNNLANMSTTG 32



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  ++ E  R Y  N + I  +  M+  T
Sbjct: 216 QGYLEDSSVDPVREVTELIEAQRGYELNAKVISAADQMLGAT 257


>gi|118589943|ref|ZP_01547347.1| flagellar basal body rod protein [Stappia aggregata IAM 12614]
 gi|118437440|gb|EAV44077.1| flagellar basal body rod protein [Stappia aggregata IAM 12614]
          Length = 243

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             I       V+ +D         G V+  N+N + E   M   +R + +  + I  S++
Sbjct: 174 AVIPDKPVIPVQTYDTNGV---RQGYVEGSNINPVREMTKMIMISRAFESATKMIDTSNE 230

Query: 124 MMTTTLD 130
                + 
Sbjct: 231 SQEKAIR 237



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 7/61 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++ ++A S     S R++ ++ N+AN  T G       YR   + F E++  +G  +V
Sbjct: 1  MESALYVALSAQVALSNRLETVARNVANMNTAG-------YRADEVKFAELVSKAGQDKV 53

Query: 64 K 64
           
Sbjct: 54 S 54


>gi|291484181|dbj|BAI85256.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           natto BEST195]
          Length = 264

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 215 ALKSGFLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 264



 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          SG+     ++ +I  NIAN  T G       +++  ++F++++  +
Sbjct: 10 SGMKNFQTKLDVIGNNIANVNTVG-------FKKSRVTFKDMVSQT 48


>gi|323699248|ref|ZP_08111160.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
 gi|323459180|gb|EGB15045.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
           ND132]
          Length = 541

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV++  E ++M  T R Y AN + I  +  M+ T + + R
Sbjct: 501 SNVDMSTEFSNMILTQRGYQANTKVITTADSMLNTLISIKR 541



 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 17/73 (23%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE----------V 54
            S ++  +G+   S  M +++ N+AN  T G       Y+R  I F +           
Sbjct: 3  FGSMYVGATGVIAHSQGMSVLANNLANVNTIG-------YKRSDILFGDLISQQVATGGA 55

Query: 55 MHGSGGVRVKKIG 67
          ++ +G VR+ ++G
Sbjct: 56 LYDNGDVRINQMG 68


>gi|221309506|ref|ZP_03591353.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313830|ref|ZP_03595635.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318753|ref|ZP_03600047.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323025|ref|ZP_03604319.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767369|ref|NP_389511.2| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|321315395|ref|YP_004207682.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
 gi|239938626|sp|P23446|FLGG_BACSU RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|142919|gb|AAA22444.1| flgG [Bacillus subtilis]
 gi|225184996|emb|CAB13502.2| flagellar hook protein [Bacillus subtilis subsp. subtilis str. 168]
 gi|320021669|gb|ADV96655.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
          Length = 264

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 215 ALKSGFLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 264



 Score = 36.8 bits (85), Expect = 0.96,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          SG+     ++ +I  NIAN  T G       +++  ++F++++  +
Sbjct: 10 SGMKNFQTKLDVIGNNIANVNTVG-------FKKSRVTFKDMVSQT 48


>gi|56419762|ref|YP_147080.1| flagellar basal body rod protein FlgG [Geobacillus kaustophilus
           HTA426]
 gi|56379604|dbj|BAD75512.1| flagellar hook protein [Geobacillus kaustophilus HTA426]
          Length = 263

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P AN +G +     +  NV++  E  +M    R + AN + I  S +++   ++L
Sbjct: 205 GAPGANGTGTIVSGALEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVNL 261


>gi|167040321|ref|YP_001663306.1| hypothetical protein Teth514_1684 [Thermoanaerobacter sp. X514]
 gi|300914405|ref|ZP_07131721.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307724359|ref|YP_003904110.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
 gi|166854561|gb|ABY92970.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter sp. X514]
 gi|300889340|gb|EFK84486.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307581420|gb|ADN54819.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
          Length = 417

 Score = 51.1 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  DM  T R + AN + I  S +++   +++ R
Sbjct: 372 GTLEMSNVDLANEFTDMIVTQRGFQANARVITASDEILQDLVNIKR 417



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL    ARM +I  NIAN  T G       Y+   ++F+E+   +
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVG-------YKASRMTFKEIFSQT 48


>gi|94969950|ref|YP_591998.1| flagellar basal-body rod FlgG [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552000|gb|ABF41924.1| Flagellar basal-body rod FlgG [Candidatus Koribacter versatilis
           Ellin345]
          Length = 263

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G+++  NV+V+ E   M    R Y AN + +  +++M+     + R
Sbjct: 216 QQGVLEQANVSVVDEFIQMILAQRSYEANSKVVTAANEMLQNLNTMAR 263



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 7/58 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          +  + + A +G+  Q   +  I+ N++NA T G       +R + + F+++M+ +  V
Sbjct: 1  MFRALYTAATGMTAQQLNLDNIANNLSNASTAG-------FRARRLQFQDLMYQNMVV 51


>gi|330501139|ref|YP_004378008.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina NK-01]
 gi|328915425|gb|AEB56256.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina NK-01]
          Length = 261

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 5/50 (10%)

Query: 82  PVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           P A+       G+++  NV V+     M    R Y AN + +  +  M  
Sbjct: 206 PGADGLGNLKQGVLEGSNVQVVEAMVAMISIQRAYEANAKVLDAASGMQQ 255



 Score = 42.2 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGG 60
          + ++  ++ +GLA Q   M  ++ N+AN  T G       ++   + FE++ +      G
Sbjct: 1  MSSALWVSKTGLAAQDKAMSAVANNLANVNTNG-------FKSDRVVFEDLFYAIELQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +  ++    S    
Sbjct: 54 AQADEVNTVPSGIQL 68


>gi|269138582|ref|YP_003295282.1| flagellar hook protein [Edwardsiella tarda EIB202]
 gi|267984242|gb|ACY84071.1| flagellar hook protein [Edwardsiella tarda EIB202]
 gi|304558592|gb|ADM41256.1| Flagellar hook protein FlgE [Edwardsiella tarda FL6-60]
          Length = 410

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG V+  NV++  +  DM    R Y +N QTIK    ++ T ++L
Sbjct: 365 SGAVEASNVDLSKQLVDMIVAQRNYQSNAQTIKTQDQILQTLVNL 409



 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SG+   S+++ +I  NIAN++T G   GS       ++F ++  GS    GV V  + 
Sbjct: 6  AISGMNAASSQLDVIGNNIANSQTVGFKSGS-------VTFADMFAGSKVGLGVTVASVN 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|224370779|ref|YP_002604943.1| FlgE [Desulfobacterium autotrophicum HRM2]
 gi|223693496|gb|ACN16779.1| FlgE [Desulfobacterium autotrophicum HRM2]
          Length = 901

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E   M  T R + AN +TI    +MM T +++
Sbjct: 860 EMSNVDISEEFVKMITTQRGFQANSKTITTVDEMMQTVINM 900


>gi|261419427|ref|YP_003253109.1| flagellar basal body rod protein FlgG [Geobacillus sp. Y412MC61]
 gi|319766242|ref|YP_004131743.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
 gi|261375884|gb|ACX78627.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|317111108|gb|ADU93600.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
          Length = 265

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P AN +G +     +  NV++  E  +M    R + AN + I  S +++   ++L
Sbjct: 207 GAPGANGTGTIVSGALEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVNL 263


>gi|225620340|ref|YP_002721597.1| flagellar hook protein FlgE [Brachyspira hyodysenteriae WA1]
 gi|225215159|gb|ACN83893.1| flagellar hook protein FlgE [Brachyspira hyodysenteriae WA1]
          Length = 423

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV++  +  DM  T R + +N +TI  +  M+   + L R
Sbjct: 376 KAGTLEMSNVDLSEQFTDMIVTQRGFQSNARTITTADQMLQEVIALKR 423


>gi|85706167|ref|ZP_01037262.1| flagellar basal-body rod protein FlgG [Roseovarius sp. 217]
 gi|85669331|gb|EAQ24197.1| flagellar basal-body rod protein FlgG [Roseovarius sp. 217]
          Length = 261

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  ++ E  R Y  N + I  +  M++ T
Sbjct: 216 QGYLEDSSVDPVREITELIEAQRGYELNAKVITAADQMLSAT 257



 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          +    IA +G+A Q  R++ IS N+AN  TTG       Y  +   F ++
Sbjct: 1  MHILKIAATGMAAQQMRVETISNNLANMSTTG-------YNARRAEFADL 43


>gi|320107042|ref|YP_004182632.1| flagellar basal-body rod protein FlgG [Terriglobus saanensis
           SP1PR4]
 gi|319925563|gb|ADV82638.1| flagellar basal-body rod protein FlgG [Terriglobus saanensis
           SP1PR4]
          Length = 262

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+V+ E   M    R Y +N + I  + DM +    L+R
Sbjct: 218 YLENSNVDVVEEFVQMVMAQRAYESNSKVIHVADDMYSQINGLIR 262



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + A SG++ Q A +  I+ N+AN+ T+G       +RR+ + FE++++ +
Sbjct: 1  MIRALYTAASGMSAQQANLDTIANNLANSATSG-------FRRRRLQFEDMVYQN 48


>gi|313672411|ref|YP_004050522.1| flagellar basal-body rod protein flgf [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939167|gb|ADR18359.1| flagellar basal-body rod protein FlgF [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 251

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT-LDLLR 133
            G ++  NVN + E   M E NR +    + I+    +      +L R
Sbjct: 202 QGYIEGSNVNAVEEMVKMIEANRGFETYQKVIQTIDQLNEKASNELGR 249



 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++   ++A SG+ +Q   +  I+ N+AN  T G       ++
Sbjct: 1  MLNGLYVAASGMMMQERVVSNIANNLANVNTNGYKKDGFTFQ 42


>gi|149182512|ref|ZP_01860985.1| flagellar hook protein [Bacillus sp. SG-1]
 gi|148849772|gb|EDL63949.1| flagellar hook protein [Bacillus sp. SG-1]
          Length = 396

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 350 SGSLEMSNVDLSEEFTEMISAQRGFQANTRIITTSDEILQELVNLKR 396



 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          SG+     ++ +I  NIAN  T G       +++  ++F++ M+ +
Sbjct: 6  SGMKNFQTKLDVIGNNIANVNTYG-------FKKGRVTFKDTMNQT 44


>gi|319409187|emb|CBI82831.1| Flagellar basal-body rod protein flgG [Bartonella schoenbuchensis
          R1]
          Length = 264

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 7/52 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + S  IA +G+A Q   + +I+ N+AN  TTG       ++R    F ++M+
Sbjct: 3  MRSLSIAATGMAAQQTNLDVIANNLANINTTG-------FKRARAEFADLMY 47



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 79  PGHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           PG P  +  G     +++  NV+ + E  ++    R Y  N + I+ S +M 
Sbjct: 205 PGFPKDDGYGGIMQAMLESSNVDPVKEITELIAAQRSYEMNSKVIQASDEMA 256


>gi|304316900|ref|YP_003852045.1| fagellar hook-basal body protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778402|gb|ADL68961.1| fagellar hook-basal body protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 420

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E A+M  T R + AN + I  S +++   ++L R
Sbjct: 375 GTLEMSNVDLANEFANMITTQRGFEANSKVITTSDEILQDLVNLKR 420



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL    A M +I  NIAN  T G       ++   ++F+E+ + +
Sbjct: 1  MLRSMYSAVSGLKAHQAEMDVIGNNIANVNTVG-------FKASRMTFKEIFNQT 48


>gi|121596117|ref|YP_988013.1| hypothetical protein Ajs_3830 [Acidovorax sp. JS42]
 gi|120608197|gb|ABM43937.1| protein of unknown function DUF1078 domain protein [Acidovorax sp.
           JS42]
          Length = 538

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QTIK    +M+T ++L
Sbjct: 499 SNVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVNL 537



 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 10/72 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV---KKIGVD 69
          SGL   +  + +I  NIAN+ TTG       ++     F  ++  + G        IGV+
Sbjct: 8  SGLNASAKNLDVIGHNIANSNTTG-------FKASRTEFAAMIASAIGAASGTNSGIGVE 60

Query: 70 QSTFVEEFDPGH 81
           S   ++F+ G+
Sbjct: 61 VSAIAQQFNQGN 72


>gi|13472592|ref|NP_104159.1| flagellar hook protein FlgE [Mesorhizobium loti MAFF303099]
 gi|14023338|dbj|BAB49945.1| flagellar hook protein; FlgE [Mesorhizobium loti MAFF303099]
          Length = 418

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L        SG+  Q+ R+   ++NIAN+ TTG       Y+R +  F  ++  S G   
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTTADNIANSDTTG-------YKRSSAEFSTLIMPSTGGAY 55

Query: 64 KKIGVDQSTFVEEFDPG 80
             GV  +      DPG
Sbjct: 56 NSGGVTTTIRQAVSDPG 72



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  DM    R Y AN +  +   D+M   ++L R
Sbjct: 372 SGALENSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMDVLVNLKR 418


>gi|218885350|ref|YP_002434671.1| hypothetical protein DvMF_0246 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756304|gb|ACL07203.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 545

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 7/57 (12%)

Query: 84  ANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ANA+G        ++  NV++  E   M  T R + +N + I  +  M+ T +++ R
Sbjct: 489 ANANGYGSVNSNSLEQSNVDLAREFVQMITTQRGFQSNSKVITTTDTMLETVVNMKR 545



 Score = 36.4 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 9/69 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGVR 62
           AS     SGL     +M ++  NIAN  T G       ++   + F++ ++      V 
Sbjct: 4  TASMWTGVSGLLAHGEKMNVLGNNIANVNTVG-------FKGSRMDFQDFINQDVYSAVG 56

Query: 63 VKKIGVDQS 71
          V ++G   S
Sbjct: 57 VSQVGRGVS 65


>gi|91776309|ref|YP_546065.1| flagellar hook protein FlgE [Methylobacillus flagellatus KT]
 gi|91710296|gb|ABE50224.1| protein of unknown function DUF1078-like protein [Methylobacillus
           flagellatus KT]
          Length = 410

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R+Y AN QTIK    +M T ++L
Sbjct: 371 SNVDLTAELVNMITAQRVYQANAQTIKTEDQIMQTLVNL 409



 Score = 33.4 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG------GVR 62
          SGL   S  +++I  N+ANA T G     T  +D Y          + G        G +
Sbjct: 8  SGLNAASKNIEVIGNNVANASTVGFKQSRTEFADVY-------ANSLGGGNASKIGIGTK 60

Query: 63 VKKIGV--DQSTFVEEFDPGHPVANASGIVKYPN 94
          +  I     Q       +P     N +G  +  +
Sbjct: 61 IAAITQQFTQGNISNSQNPLDVAINGNGFFRMSD 94


>gi|251772436|gb|EES53003.1| probable flagellar hook protein FlgE [Leptospirillum
           ferrodiazotrophum]
          Length = 458

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NV++  +  DM    R Y AN   I   + +M T L 
Sbjct: 416 EQSNVDLGRQMIDMISAERGYQANASVISADNQLMNTLLT 455



 Score = 38.0 bits (88), Expect = 0.51,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +++S ++ANSGL+     M +I  NI+N  T G       ++     F  +   +   + 
Sbjct: 3  ILSSMYVANSGLSAMGTDMSVIGNNISNMNTNG-------FKAGRAVFANIYGQTLAGKS 55

Query: 64 KKIGVDQS 71
            +G  Q 
Sbjct: 56 NAVGPSQP 63


>gi|289208114|ref|YP_003460180.1| fagellar hook-basal body protein [Thioalkalivibrio sp. K90mix]
 gi|288943745|gb|ADC71444.1| fagellar hook-basal body protein [Thioalkalivibrio sp. K90mix]
          Length = 408

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +G ++  NV++  E  ++    R + AN QTI  +  +  T +++
Sbjct: 362 QAGALEASNVDIAQELVNLITAQRNFQANAQTISTADQVTQTIINI 407


>gi|66046704|ref|YP_236545.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257411|gb|AAY38507.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078 [Pseudomonas syringae pv. syringae B728a]
          Length = 262

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            NV+ + E  +M  T R Y  N + I  +  M+   
Sbjct: 223 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLQNL 258



 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + ++A +GLA Q   +  IS N+AN  TTG
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTG 33


>gi|90408062|ref|ZP_01216233.1| Flagellar basal body rod protein FlgG [Psychromonas sp. CNPT3]
 gi|90310819|gb|EAS38933.1| Flagellar basal body rod protein FlgG [Psychromonas sp. CNPT3]
          Length = 262

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G+++  NVNV  E  ++ E+ R+Y  N + I    +M++
Sbjct: 217 QGMLETSNVNVTEELVNLIESQRVYEMNSKVISAVDEMLS 256



 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   +  IS N+ANA T G       +++    FE++++ +
Sbjct: 7  ISKTGLDAQQTNVATISNNLANASTVG-------FKKSRAIFEDLLYQN 48


>gi|23092317|gb|AAN08642.1| FlgG [Aeromonas hydrophila]
          Length = 262

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G+++  NVNV  E  ++ + +R+Y  N   +     MM+  + 
Sbjct: 216 KQGMLETSNVNVTEELVNLIQAHRVYEMNSNVLSAVDGMMSFLIQ 260



 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
          M+    +  I+ +GL  Q   + + S N+ANA T G
Sbjct: 1  MNP---ALWISKTGLDAQQTNIAVTSNNLANASTVG 33


>gi|330899406|gb|EGH30825.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 262

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            NV+ + E  +M  T R Y  N + I  +  M+   
Sbjct: 223 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLQNL 258



 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + ++A +GLA Q   +  IS N+AN  TTG
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTG 33


>gi|294635610|ref|ZP_06714087.1| flagellar hook protein FlgE [Edwardsiella tarda ATCC 23685]
 gi|291091062|gb|EFE23623.1| flagellar hook protein FlgE [Edwardsiella tarda ATCC 23685]
          Length = 411

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG V+  NV++  +  DM    R Y +N QTIK    ++ T ++L
Sbjct: 366 SGAVEASNVDLSKQLVDMIVAQRNYQSNAQTIKTQDQILQTLVNL 410



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SG+   S+++ +I  NIAN++T G   GS       ++F ++  GS    GV V  + 
Sbjct: 6  AISGMNAASSQLDVIGNNIANSQTVGFKSGS-------VTFADMFAGSKVGLGVTVASVN 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|209695760|ref|YP_002263690.1| flagellar basal body rod protein FlgG [Aliivibrio salmonicida
           LFI1238]
 gi|208009713|emb|CAQ80017.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Aliivibrio salmonicida LFI1238]
          Length = 262

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A    +++  NVNV  E  +M E  R+Y  N + I     M +
Sbjct: 214 AIRQSMLEASNVNVTEELVNMIEAQRVYEMNSKVISAVDKMAS 256



 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 10/58 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    +  ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 1  MNP---ALWVSKTGLDAQQTNIATISNNLANASTVG-------FKKSRAVFEDLFYQN 48


>gi|197104381|ref|YP_002129758.1| flagellar basal-body rod protein FlgG [Phenylobacterium zucineum
           HLK1]
 gi|196477801|gb|ACG77329.1| flagellar basal-body rod protein FlgG [Phenylobacterium zucineum
           HLK1]
          Length = 262

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G  +  NV+ + E   +    R Y  N + I  + +M+ T 
Sbjct: 216 QGYTEASNVDAVAEITALIVAQRAYEMNSKVISTADNMLATA 257



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 10/61 (16%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGV 61
          + +   A +G+A Q   +++IS NIAN  T         ++R+   F+++++    + GV
Sbjct: 1  MQALRTAATGMAAQQLNVEVISNNIANMNTVA-------FKRQRAEFQDLLYQTFEAAGV 53

Query: 62 R 62
          +
Sbjct: 54 Q 54


>gi|88858142|ref|ZP_01132784.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
 gi|88819759|gb|EAR29572.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
          Length = 255

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NVN + E   M    R +   ++ +K +  M  +   LLR
Sbjct: 207 SGALEMSNVNPVDEMVGMIAHQRQFELQVKMMKTAEKMDESQASLLR 253


>gi|297569153|ref|YP_003690497.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925068|gb|ADH85878.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 806

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M  T R + AN + I  + +M+   +++ R
Sbjct: 764 EMSNVDLGTEFVKMITTQRGFQANSKMITTTDEMLNELINIKR 806


>gi|254292905|ref|YP_003058928.1| flagellar basal body rod protein FlgG [Hirschia baltica ATCC 49814]
 gi|254041436|gb|ACT58231.1| flagellar basal-body rod protein FlgG [Hirschia baltica ATCC 49814]
          Length = 261

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  NVN + E + +    R Y  N + I  + +M+ TT  L
Sbjct: 216 QGFLETSNVNAVTEISALINAQRAYEMNSKVITATDEMLQTTSQL 260



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 7/52 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + +   A +G+  Q   +++IS NIAN  TTG       Y+R+   F+++++
Sbjct: 1  MRALSTAATGMQAQQLNVEVISNNIANMNTTG-------YKRQRAEFQDLLY 45


>gi|237799211|ref|ZP_04587672.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|330961201|gb|EGH61461.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|331022066|gb|EGI02123.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 262

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            NV+ + E  +M  T R Y  N + I  +  M+   
Sbjct: 223 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLQNL 258



 Score = 40.7 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + ++A +GLA Q   +  IS N+AN  TTG
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTG 33


>gi|28869144|ref|NP_791763.1| flagellar basal-body rod protein FlgG [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|71735047|ref|YP_275559.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213967579|ref|ZP_03395727.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato T1]
 gi|257484944|ref|ZP_05638985.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289627766|ref|ZP_06460720.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651643|ref|ZP_06482986.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298487853|ref|ZP_07005893.1| Flagellar basal-body rod protein flgG [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|301385716|ref|ZP_07234134.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060071|ref|ZP_07251612.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato K40]
 gi|302134830|ref|ZP_07260820.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|302185580|ref|ZP_07262253.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           syringae 642]
 gi|28852384|gb|AAO55458.1| flagellar basal-body rod protein FlgG [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|71555600|gb|AAZ34811.1| flagellar basal-body rod protein FlgG [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213927880|gb|EEB61427.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato T1]
 gi|298157578|gb|EFH98658.1| Flagellar basal-body rod protein flgG [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320325096|gb|EFW81165.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329355|gb|EFW85348.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330866425|gb|EGH01134.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330880529|gb|EGH14678.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330986471|gb|EGH84574.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011045|gb|EGH91101.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331017022|gb|EGH97078.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 262

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            NV+ + E  +M  T R Y  N + I  +  M+   
Sbjct: 223 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLQNL 258



 Score = 40.7 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + ++A +GLA Q   +  IS N+AN  TTG
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTG 33


>gi|294501851|ref|YP_003565551.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium
           QM B1551]
 gi|294351788|gb|ADE72117.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium
           QM B1551]
          Length = 274

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDL 131
                +PG       G V+  NV+      D+    R + AN + ++     M     ++
Sbjct: 211 PSARNNPGISYQLKQGFVERSNVDAAQNMTDLLTAYRAFEANQKIMQAYDRSMDKAANEI 270

Query: 132 LR 133
            R
Sbjct: 271 GR 272



 Score = 33.7 bits (77), Expect = 7.6,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          +    + A +G+  Q  +  +++ NIANA T G        + 
Sbjct: 1  MFKGFYTAAAGMLSQQRQTDLLTNNIANANTPGFKADQGTLKA 43


>gi|319944135|ref|ZP_08018413.1| flagellar hook protein FlgE [Lautropia mirabilis ATCC 51599]
 gi|319742629|gb|EFV95038.1| flagellar hook protein FlgE [Lautropia mirabilis ATCC 51599]
          Length = 417

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 26/46 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E  +M    R+Y AN QT++    ++ T ++L
Sbjct: 371 QSGALESSNVDLTQELVNMITAQRVYQANAQTVRTHDQLLQTIVNL 416


>gi|325567534|ref|ZP_08144201.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158967|gb|EGC71113.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           ATCC 12755]
          Length = 158

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 49/132 (37%), Gaps = 23/132 (17%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMHG 57
           D L  + +++         R ++IS NIAN  T G       Y+ K I FE    + +  
Sbjct: 44  DLLKTAMNVSA-------QRAELISSNIANVNTDG-------YKAKRIVFESELKQALAS 89

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           SG   V +  V Q       +    + + +G     NV++ VE  D       Y A    
Sbjct: 90  SGTDAVTEASVSQVKPKITENATTSIKD-NGN----NVDLEVEMLDQAANGLYYSALTAQ 144

Query: 118 IKQSHDMMTTTL 129
           +     MM   L
Sbjct: 145 VNGRLQMMNLVL 156


>gi|330875986|gb|EGH10135.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330967093|gb|EGH67353.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 262

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            NV+ + E  +M  T R Y  N + I  +  M+   
Sbjct: 223 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLQNL 258



 Score = 40.7 bits (95), Expect = 0.071,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + ++A +GLA Q   +  IS N+AN  TTG
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTG 33


>gi|302343296|ref|YP_003807825.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
 gi|301639909|gb|ADK85231.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
          Length = 239

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A ASG ++    +++ E        R + ANL+TI+   +M+ T LD+
Sbjct: 190 AIASGALQTSGTDIVSEMVGQITAQRSFEANLKTIRTGDEMLGTILDI 237



 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 11/58 (18%)

Query: 10 IAN--SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          IA   SG+     R+   + N+AN      TPG  P R      E+     GGV V  
Sbjct: 6  IAAGISGMNAAVRRLNQSANNLANI----STPGYVPSR-----VEQADLAGGGVAVVG 54


>gi|300854137|ref|YP_003779121.1| Flagellar hook-associated protein [Clostridium ljungdahlii DSM
          13528]
 gi|300434252|gb|ADK14019.1| Flagellar hook-associated protein [Clostridium ljungdahlii DSM
          13528]
          Length = 638

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 7/75 (9%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT------PGSDPYRRKTISFEEV 54
          M  L +  + A SGL  Q   + + S NIANA T G +        + PY   ++     
Sbjct: 1  MPGLFSIFNTAKSGLFAQQTAINVTSHNIANANTDGYSRQRADMETTTPYTLPSVDGAAG 60

Query: 55 MHGSG-GVRVKKIGV 68
              G GV V  I  
Sbjct: 61 AGQLGTGVTVDSIER 75



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E  ++ +    Y AN + I    +++   ++ L+
Sbjct: 597 SGVSIDEEMTNLIQFQHCYQANAKMISTVDELLDVVINQLK 637


>gi|302383956|ref|YP_003819779.1| flagellar basal-body rod protein FlgG [Brevundimonas
          subvibrioides ATCC 15264]
 gi|302194584|gb|ADL02156.1| flagellar basal-body rod protein FlgG [Brevundimonas
          subvibrioides ATCC 15264]
          Length = 262

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +   A SG+A Q   +++IS NIAN  T G       Y+R+   F+++++ +
Sbjct: 1  MRALRTAASGMAAQQLNVEVISNNIANMNTVG-------YKRQRAEFQDLIYQN 47



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G  +  NV+ + E + +    R Y  N + I  + +MM+
Sbjct: 216 QGYTEASNVDAVTEISALIIAQRAYEMNSKVITTADEMMS 255


>gi|203288202|ref|YP_002223217.1| flagellar hook-basal body complex protein [Borrelia recurrentis A1]
 gi|201085422|gb|ACH94996.1| flagellar hook-basal body complex protein [Borrelia recurrentis A1]
          Length = 291

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            SG+++  NVN + E   M   NR+Y AN +TI+    ++   + ++ +
Sbjct: 242 ESGVLECSNVNAINEMVSMITVNRVYEANQKTIQTEDTLLGKLINEIGK 290



 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTG 36
          Y++   + A SG+  Q  R+++I+ N+AN   TG
Sbjct: 9  YMVRGIYTAASGMIAQRHRLEVIANNLANIDLTG 42


>gi|203284669|ref|YP_002222409.1| flagellar hook-basal body complex protein [Borrelia duttonii Ly]
 gi|201084112|gb|ACH93703.1| flagellar hook-basal body complex protein [Borrelia duttonii Ly]
          Length = 282

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            SG+++  NVN + E   M   NR+Y AN +TI+    ++   + ++ +
Sbjct: 233 ESGVLECSNVNAINEMVSMITVNRVYEANQKTIQTEDTLLGKLINEIGK 281



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 11 ANSGLAVQSARMQIISENIANARTTG 36
          A SG+  Q  R+++I+ N+AN   TG
Sbjct: 8  AASGMIAQRHRLEVIANNLANIDLTG 33


>gi|285018207|ref|YP_003375918.1| flagellar basal-body rod protein flgg [Xanthomonas albilineans GPE
           PC73]
 gi|283473425|emb|CBA15930.1| probable flagellar basal-body rod protein flgg [Xanthomonas
           albilineans]
          Length = 261

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NVNV+ E   M ET R Y  N + I  +  M+
Sbjct: 216 QGALEGSNVNVVEELVSMIETQRAYEMNAKAISTTDAML 254



 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  +A +G+  Q  RM ++S N+AN  TTG       ++R   SFE++++  
Sbjct: 1  MNQALWVAKTGMDAQQTRMSVVSNNLANTSTTG-------FKRDRASFEDLLYQQ 48


>gi|289804814|ref|ZP_06535443.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 65

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|222147589|ref|YP_002548546.1| flagellar hook protein FlgE [Agrobacterium vitis S4]
 gi|221734577|gb|ACM35540.1| flagellar hook protein [Agrobacterium vitis S4]
          Length = 418

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  +M ++ R Y AN +  + + DM+ T + L R
Sbjct: 376 ETSNVDLATELTNMIQSQRSYSANSKVFQTAADMLDTLISLKR 418



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 15/71 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          L  S + A SGL  Q++++  + +N+AN+ TTG       Y+R + +F  ++        
Sbjct: 3  LSGSMNTAVSGLQAQASKLSTVGDNVANSDTTG-------YKRVSTAFSSLVVGSSGSGT 55

Query: 56 HGSGGVRVKKI 66
          + SGGV+   +
Sbjct: 56 YNSGGVQTTTV 66


>gi|160896079|ref|YP_001561661.1| flagellar basal body FlaE domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361663|gb|ABX33276.1| flagellar basal body FlaE domain protein [Delftia acidovorans
           SPH-1]
          Length = 423

 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QTIK    + +T ++L
Sbjct: 384 SNVDLTAELVNMMTAQRAYQANAQTIKTQDQVFSTLVNL 422



 Score = 38.8 bits (90), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 7/48 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          SGL   S  + +I  NIANA TTG       ++     F E +  + G
Sbjct: 8  SGLNAASKNLDVIGHNIANANTTG-------FKSSRAEFAEAVASAVG 48


>gi|222084885|ref|YP_002543414.1| flagellar hook protein [Agrobacterium radiobacter K84]
 gi|221722333|gb|ACM25489.1| flagellar hook protein [Agrobacterium radiobacter K84]
          Length = 425

 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 29/61 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A SG+  Q+ R+  +S+NIAN+ TTG    S  +    +      + SGGV  
Sbjct: 3  IFGSMKTAISGMNAQANRLATVSDNIANSSTTGYKQASTSFSSLVLPSSSGNYNSGGVET 62

Query: 64 K 64
           
Sbjct: 63 T 63



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M    + Y AN +  +   D++   ++L R
Sbjct: 378 QSGALEESNVDLATELTNMITAQKSYTANSKVFQAGSDLLDVLVNLQR 425


>gi|114762164|ref|ZP_01441632.1| flagellar basal-body rod protein FlgG [Pelagibaca bermudensis
          HTCC2601]
 gi|114545188|gb|EAU48191.1| flagellar basal-body rod protein FlgG [Roseovarius sp. HTCC2601]
          Length = 261

 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R+++IS N++N  TTG       Y  +   F ++
Sbjct: 1  MRALKIAATGMSAQQMRVEVISNNLSNMSTTG-------YNARRAEFADL 43



 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           G ++  +V+ + E  ++ E  R Y  N + I  +  M+  T+ 
Sbjct: 217 GYLEDSSVDPVYEITELIEAQRGYELNSKVISAADQMLGATVQ 259


>gi|84624090|ref|YP_451462.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|161898985|ref|YP_201214.2| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|166712060|ref|ZP_02243267.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzicola BLS256]
 gi|188576758|ref|YP_001913687.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188576950|ref|YP_001913879.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|84368030|dbj|BAE69188.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188521210|gb|ACD59155.1| flagellar basal-body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521402|gb|ACD59347.1| flagellar basal-body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 261

 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NVN + E   M ET R Y  N + I  +  M+
Sbjct: 216 QGALEGSNVNTVEELVSMIETQRAYEMNAKAISTTDAML 254



 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  +A +GL  Q  RM +IS N+AN  TTG       ++R   +FE++++  
Sbjct: 1  MNQALWVAKTGLDAQQTRMSVISNNLANTNTTG-------FKRDRAAFEDLLYQQ 48


>gi|88858141|ref|ZP_01132783.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
 gi|88819758|gb|EAR29571.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
          Length = 262

 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 5/53 (9%)

Query: 79  PGHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G+P A+       G ++  NVN   E  ++ ET R+Y  N + I     M+ 
Sbjct: 204 QGNPGADGLGVIVQGALETSNVNTTEELVNLIETQRIYEMNSKVISSVDQMLN 256



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 7  ISKTGLDAQQTDISVISNNLANASTVG-------YKKSRAVFEDLLYQN 48


>gi|296330843|ref|ZP_06873318.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674361|ref|YP_003866033.1| flagellar hook protein [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151848|gb|EFG92722.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412605|gb|ADM37724.1| flagellar hook protein [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 264

 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 217 KSGFLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 264



 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          SG+     ++ +I  NIAN  T G       +++  ++F++++  +
Sbjct: 10 SGMKNFQTKLDVIGNNIANVNTVG-------FKKSRVTFKDMVSQT 48


>gi|90415318|ref|ZP_01223252.1| flagellar hook protein FlgE [marine gamma proteobacterium HTCC2207]
 gi|90332641|gb|EAS47811.1| flagellar hook protein FlgE [marine gamma proteobacterium HTCC2207]
          Length = 944

 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN + I+ S  +  T + +
Sbjct: 902 ERSNVDLTAELVDLITAQRNFQANAKAIETSSSLTQTIIQI 942


>gi|254478136|ref|ZP_05091519.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653]
 gi|214035998|gb|EEB76689.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653]
          Length = 251

 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  NVN + E  +M    R Y +N + +    + +   + ++ R
Sbjct: 202 KQGFLEGSNVNSVKEMVNMISVMRNYESNQKVVTAFDETLGKAVNEVGR 250



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 17/74 (22%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
          +I   + A SG+  Q+  M +++ N+AN  T G       Y++  +       FE +  G
Sbjct: 1  MIRGLYTAASGMLAQTKVMDVLANNLANVNTVG-------YKKDVVVLSSFPNFETIREG 53

Query: 58 SGGV----RVKKIG 67
             V    +V +I 
Sbjct: 54 GDNVPPDRKVGRIE 67


>gi|289679021|ref|ZP_06499911.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           syringae FF5]
 gi|330972416|gb|EGH72482.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 262

 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            NV+ + E  +M  T R Y  N + I  +  M+   
Sbjct: 223 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLQNL 258



 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + ++A +GLA Q   +  IS N+AN  TTG
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTG 33


>gi|298529927|ref|ZP_07017329.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509301|gb|EFI33205.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 261

 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 12/78 (15%)

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVAN---ASGIVKYPNVNVLVETADMRETNRLYM 112
            G   V+VK  G D +          P  +     G ++  NV+ + E  +M  T R + 
Sbjct: 187 KGRQLVQVKD-GADSAPI--------PAEDARIEQGYLENSNVDPVYEMVNMISTMRNFE 237

Query: 113 ANLQTIKQSHDMMTTTLD 130
           A  + +  SH+     + 
Sbjct: 238 ALQKMMTSSHEKDQQLIQ 255



 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 11/54 (20%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          D + ++       ++ Q A+M  I+ N+AN  TTG       Y+R  I+FE+V 
Sbjct: 3  DEMYSAFF---GAMS-QEAKMNTITNNLANVNTTG-------YKRDKIAFEDVF 45


>gi|153953785|ref|YP_001394550.1| hypothetical protein CKL_1160 [Clostridium kluyveri DSM 555]
 gi|219854401|ref|YP_002471523.1| hypothetical protein CKR_1058 [Clostridium kluyveri NBRC 12016]
 gi|146346666|gb|EDK33202.1| FlgE [Clostridium kluyveri DSM 555]
 gi|219568125|dbj|BAH06109.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 348

 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + AN + I     ++   ++L R
Sbjct: 302 QGFLEMSNVDLAQQFTDMIVATRAFQANGKMITNGDTILEDLINLKR 348



 Score = 40.3 bits (94), Expect = 0.093,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 27/86 (31%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          ++ S +   SGL     ++ +I  NIAN+ TT        Y+ ++++F++++        
Sbjct: 1  MLPSMYSGISGLRANQQKLNVIGNNIANSSTTA-------YKTQSMNFQDMISQNLSDPS 53

Query: 56 ------------HGSGGVRVKKIGVD 69
                          GV+V  I  D
Sbjct: 54 APSTSIGGVNGKQSGLGVQVAGISTD 79


>gi|218509843|ref|ZP_03507721.1| flagellar hook protein FlgE [Rhizobium etli Brasil 5]
          Length = 65

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +  S   A SG+  Q+ R+  +S+NIAN  TTG       Y+  + SF  ++  S G
Sbjct: 3  IFGSMKTAVSGMNAQANRLSTVSDNIANVNTTG-------YKAVSTSFSSLVLPSSG 52


>gi|296134367|ref|YP_003641614.1| fagellar hook-basal body protein [Thermincola sp. JR]
 gi|296032945|gb|ADG83713.1| fagellar hook-basal body protein [Thermincola potens JR]
          Length = 362

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV V  E  +M   NR Y  + ++I+ S +M+     LL+
Sbjct: 319 EGSNVEVAEEMVNMIIANRAYELSSRSIRTSDEMLGMANQLLK 361



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +   A+SG+  Q   M  I+ N+AN  TTG       Y++  + F+++++  
Sbjct: 1  MLQALWSASSGMLGQQLAMDSIANNLANVNTTG-------YKKSRVEFQDLLYSE 48


>gi|260222468|emb|CBA32062.1| hypothetical protein Csp_D30240 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 104

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QTIK    +M+T ++L
Sbjct: 65  SNVDLTGELVNMMTAQRNYQANAQTIKTQDQIMSTLVNL 103


>gi|217976225|ref|YP_002360372.1| flagellar basal body rod protein FlgG [Methylocella silvestris BL2]
 gi|217501601|gb|ACK49010.1| flagellar basal-body rod protein FlgG [Methylocella silvestris BL2]
          Length = 262

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            ++  NV+ + E  D+    R Y  N + I+ + +M
Sbjct: 218 YLESSNVDPVKEITDLIAAQRAYEMNSKVIQAASEM 253



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+A Q   + +I+ NIAN  TTG       ++R    F ++++ +
Sbjct: 1  MKALSIAATGMAAQDLNVAVIANNIANINTTG-------FKRARAEFTDLLYQA 47


>gi|85715052|ref|ZP_01046037.1| hypothetical protein NB311A_11787 [Nitrobacter sp. Nb-311A]
 gi|85698249|gb|EAQ36121.1| hypothetical protein NB311A_11787 [Nitrobacter sp. Nb-311A]
          Length = 262

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 7/57 (12%)

Query: 84  ANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           AN  G        ++  NV V+ E +D+    R Y  N + +  +  M+ +   L R
Sbjct: 206 ANIDGFGDMQQSSLEQANVEVVSEISDLIAAQRAYEMNAKVVSAADQMLQSASALFR 262



 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 7/44 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          A +G+A Q   +Q+IS NIAN RTTG       Y+++  +F+++
Sbjct: 7  AATGMAAQELNVQVISNNIANLRTTG-------YKKQRAAFQDL 43


>gi|319649558|ref|ZP_08003714.1| flagellar hook protein [Bacillus sp. 2_A_57_CT2]
 gi|317398720|gb|EFV79402.1| flagellar hook protein [Bacillus sp. 2_A_57_CT2]
          Length = 268

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 222 SGTLEMSNVDLSEEFTEMITAQRGFQANTRIITTSDEILQELVNLKR 268



 Score = 34.5 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SG+     ++ +I  NIAN  T G       Y++  ++F++++  +
Sbjct: 1  MLRSMYSGISGMKNFQTKLDVIGNNIANVNTFG-------YKKGRVNFKDMVSQT 48


>gi|238916190|ref|YP_002929707.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
           27750]
 gi|238871550|gb|ACR71260.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
           27750]
          Length = 277

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 18/45 (40%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V  E  ++    R Y    + I  S  MM    +L R
Sbjct: 233 YLEASNVQVATEMVNLITAQRAYELCSKAITTSDTMMEQANNLKR 277



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 7/69 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A SG+  Q   +  I+ N+AN  T G       Y+++   F+ +++ +   + 
Sbjct: 1  MMRSLWTAASGMMSQQTSVDTIANNLANVNTIG-------YKQEQTQFKSLLYQNLQAKT 53

Query: 64 KKIGVDQST 72
               D   
Sbjct: 54 TSANGDDKP 62


>gi|297584044|ref|YP_003699824.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
 gi|297142501|gb|ADH99258.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
          Length = 424

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E A+M  + R + AN + I  S +++   ++L R
Sbjct: 382 EMSNVDLSEEFAEMIVSQRGFQANTRMITTSDEILQELINLKR 424


>gi|78485812|ref|YP_391737.1| hypothetical protein Tcr_1471 [Thiomicrospira crunogena XCL-2]
 gi|78364098|gb|ABB42063.1| Flagellar hook protein FlgE [Thiomicrospira crunogena XCL-2]
          Length = 538

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++Y NV+   E   M +T R Y A+ Q I+ S  +  T L L
Sbjct: 494 AGALEYSNVDTAGELVHMIQTQRTYQASAQVIQTSQTLTQTILQL 538



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 12/64 (18%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-----GGVRVKK 65
          A SGL   S  + +IS N+ANA+T G       Y+     F ++ +G+      GVRV  
Sbjct: 9  AVSGLNAASQGLGVISNNLANAQTMG-------YKSSRAEFSDMFYGAQSTPGNGVRVDS 61

Query: 66 IGVD 69
          I  D
Sbjct: 62 ITQD 65


>gi|33592479|ref|NP_880123.1| flagellar hook protein FlgE [Bordetella pertussis Tohama I]
 gi|33572125|emb|CAE41667.1| flagellar hook protein FlgE [Bordetella pertussis Tohama I]
 gi|332381896|gb|AEE66743.1| flagellar hook protein FlgE [Bordetella pertussis CS]
          Length = 473

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y AN QTIK   ++M   +++
Sbjct: 432 EASNVDMSRELVNMIVAQRTYQANAQTIKTQDEVMQVLMNM 472



 Score = 41.1 bits (96), Expect = 0.060,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 10/57 (17%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKI 66
          SGL   S  + +I  NIAN+ T G   G+        SF +V   S    GV+V  I
Sbjct: 8  SGLNAASQNLDVIGNNIANSGTVGFKSGA-------ASFADVYASSRVGLGVKVSAI 57


>gi|312884834|ref|ZP_07744526.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367486|gb|EFP95046.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 398

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA TTG       ++     F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNTDLNTISHNIANASTTG-------FKGARTEFSAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 5/86 (5%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQS----TFVEEFDPGHPVAN-ASGIVKYPNVNVLVETA 102
            +   +  +  G V+V      QS      +        + + + G ++  NV++  E  
Sbjct: 309 QVVLADFANPQGLVKVNGTAWTQSFSSGAPIVGVPGTGTLGDLSPGALEGSNVDLTSELV 368

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTT 128
           ++    R Y AN +TI  +  +    
Sbjct: 369 NLMTAQRNYQANAKTISTNDKLTQAL 394


>gi|260466603|ref|ZP_05812791.1| flagellar basal body FlaE domain protein [Mesorhizobium
          opportunistum WSM2075]
 gi|259029609|gb|EEW30897.1| flagellar basal body FlaE domain protein [Mesorhizobium
          opportunistum WSM2075]
          Length = 418

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L        SG+  Q+ R+   ++NIAN+ TTG       Y+R +  F  ++  S G   
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTTADNIANSDTTG-------YKRSSAEFSTLIMPSTGGAY 55

Query: 64 KKIGVDQSTFVEEFDPG 80
             GV  +      DPG
Sbjct: 56 NSGGVTTTIRQAVSDPG 72



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  DM    R Y AN +  +   D+M   ++L R
Sbjct: 372 SGALENSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMDVLVNLKR 418


>gi|296126058|ref|YP_003633310.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
 gi|296017874|gb|ADG71111.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
          Length = 441

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV++  +  DM  T R + +N +TI  +  M+   + L R
Sbjct: 394 KAGALEMSNVDLSEQFTDMIVTQRGFQSNARTITTADQMLQEVIALKR 441



 Score = 40.7 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L A      SGL     RM ++  NIAN  T G       ++R  ++F++++  S
Sbjct: 2  MRSLFAGV----SGLQNHQTRMDVVGNNIANVNTYG-------FKRGRVTFKDMISQS 48


>gi|168334552|ref|ZP_02692708.1| hypothetical protein Epulo_06138 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 473

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 28/48 (58%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A+G ++  NV++  E  +M  T R Y A+ +TI  S +M+   ++L R
Sbjct: 426 ATGTLEMSNVDLSKEFTEMITTQRGYQASSKTITTSDEMLQELINLKR 473



 Score = 40.7 bits (95), Expect = 0.065,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L +      SGL     +M +I  NIAN  T G       ++ + ++F +V + +
Sbjct: 2  MRSLFSGV----SGLQSHQLKMDVIGNNIANVNTIG-------FKSQRVTFADVYYQT 48


>gi|308273521|emb|CBX30123.1| hypothetical protein N47_D29320 [uncultured Desulfobacterium sp.]
          Length = 469

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M  T R Y AN + I     M++  ++L R
Sbjct: 427 EQSNVDLATEFVRMITTQRGYQANSKIITTIDQMLSELINLKR 469


>gi|300870390|ref|YP_003785261.1| flagellar hook protein FlgE [Brachyspira pilosicoli 95/1000]
 gi|300688089|gb|ADK30760.1| flagellar hook protein, FlgE [Brachyspira pilosicoli 95/1000]
          Length = 441

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV++  +  DM  T R + AN +TI  +  ++   + L R
Sbjct: 394 KAGTLEMSNVDLSEQFTDMIVTQRGFQANARTITTADQLLQEVIALKR 441



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L A      SGL     RM ++  NI+N  T G       +++  ++F++++  S
Sbjct: 2  MRSLFAGV----SGLQNHQTRMDVVGNNISNVNTYG-------FKKGRVTFKDMISQS 48


>gi|20806698|ref|NP_621869.1| flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|20515152|gb|AAM23473.1| Flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
          Length = 251

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  NVN + E  +M    R Y +N + +    + +   + ++ R
Sbjct: 202 KQGFLEGSNVNSVKEMVNMISVMRNYESNQKVVTAFDETLGKAVNEVGR 250



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I   + A SG+  Q+  M +++ N+ANA T G       Y++  +      +
Sbjct: 1  MIRGLYTAASGMLAQTKVMDVLANNLANANTVG-------YKKDIVVLSSFPN 46


>gi|242278483|ref|YP_002990612.1| flagellar basal-body rod protein FlgF [Desulfovibrio salexigens DSM
           2638]
 gi|242121377|gb|ACS79073.1| flagellar basal-body rod protein FlgF [Desulfovibrio salexigens DSM
           2638]
          Length = 255

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           A G ++  NV V+ E   M E  R +    + I  +  +    + 
Sbjct: 204 AQGYIEKSNVEVVNEMVAMIECQRSFEMYQKMITTTDQLDQKVIQ 248


>gi|84514831|ref|ZP_01002194.1| Flagellar distal rod protein [Loktanella vestfoldensis SKA53]
 gi|84510990|gb|EAQ07444.1| Flagellar distal rod protein [Loktanella vestfoldensis SKA53]
          Length = 261

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 12/68 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + H+A +GL  Q  RMQ+I+ N+AN  T G       ++   ++FE +++     +V
Sbjct: 1  MTNAMHVAKTGLNAQQTRMQVIANNLANLNTVG-------FKSDRVNFESLLY-----QV 48

Query: 64 KKIGVDQS 71
          K+ G DQ+
Sbjct: 49 KRSGGDQT 56



 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ +  +M ET R Y  + + I  S +MM 
Sbjct: 216 QGALEGSNVNVVQQLVEMIETQRAYEVSSKAISSSDEMMR 255


>gi|302392387|ref|YP_003828207.1| flagellar hook-basal body protein [Acetohalobium arabaticum DSM
           5501]
 gi|302204464|gb|ADL13142.1| flagellar hook-basal body protein [Acetohalobium arabaticum DSM
           5501]
          Length = 557

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  +  +M    R + +N + I  S  M+ T ++L R
Sbjct: 512 GSLEMSNVDLARQFTEMITAQRGFQSNSKAISTSDQMLQTLVNLKR 557



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     +M +I  NI+N  TTG       Y+   ++F+E+++ +
Sbjct: 1  MMRSMYAGVSGLKAHQTKMDVIGNNISNVNTTG-------YKGSRVTFKEMLNQT 48


>gi|163803175|ref|ZP_02197058.1| putative flagellar hook-associated protein [Vibrio sp. AND4]
 gi|159173075|gb|EDP57908.1| putative flagellar hook-associated protein [Vibrio sp. AND4]
          Length = 457

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 33/92 (35%), Gaps = 16/92 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SGGV 61
          +IA SGL      + + ++N+AN  T G       Y R+      V  G         GV
Sbjct: 5  NIALSGLNANRVALDVTAQNVANINTPG-------YSRQQALMASVGDGKYNKLSPGMGV 57

Query: 62 RVKKIGVDQSTF--VEEFDPGHPVANASGIVK 91
           V  I      F   + +      A ++G V 
Sbjct: 58 EVTSIRRVTDQFLVKQTWSTNSLAAYSAGYVT 89


>gi|126730134|ref|ZP_01745946.1| flagellar basal-body rod protein FlgG [Sagittula stellata E-37]
 gi|126709514|gb|EBA08568.1| flagellar basal-body rod protein FlgG [Sagittula stellata E-37]
          Length = 261

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  +V+ + E  D+ E  R Y  N + I  +  M+  T
Sbjct: 216 QGYLEDSSVDAVKEITDLIEAQRGYELNSKVISAADQMLGAT 257



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R+++IS N++N  TTG       Y  +   F ++
Sbjct: 1  MRALKIAATGMSAQQMRVEVISNNLSNMSTTG-------YNARRAEFADL 43


>gi|23099019|ref|NP_692485.1| flagellar basal body rod protein FlgG [Oceanobacillus iheyensis
           HTE831]
 gi|22777247|dbj|BAC13520.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831]
          Length = 285

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 239 SGALEMSNVDLSEEFTEMITAQRSFQANTRIITTSDEILQELVNLKR 285



 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 18/75 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          ++ S +   SG+     ++ +I  NIAN  T G       Y++  ++F+++M  +     
Sbjct: 1  MLRSMYSGISGMKNSQTKLDVIGNNIANVNTVG-------YKKSMVNFQDMMSQTTSGAQ 53

Query: 59 ------GGVRVKKIG 67
                GGV   ++G
Sbjct: 54 GSTANRGGVNASQVG 68


>gi|330447903|ref|ZP_08311551.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
          mandapamensis svers.1.1.]
 gi|328492094|dbj|GAA06048.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
          mandapamensis svers.1.1.]
          Length = 398

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S  IA SGL   + ++  IS NIAN  T+G       ++     F  V +G  +GGV V 
Sbjct: 2  SFDIALSGLDATNVQLNTISNNIANVSTSG-------FKESRTEFSAVYNGMQAGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 AI 56



 Score = 45.3 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +G ++  NV++  E   +    R Y AN +TI  S  +  + 
Sbjct: 353 AGALEGSNVDLTSELVSLMTAQRNYQANAKTISTSDKLTQSL 394


>gi|304407726|ref|ZP_07389377.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
 gi|304343209|gb|EFM09052.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
          Length = 270

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G V+  NV++  E  D+    R Y  + + +  S  MM
Sbjct: 224 QGYVEQSNVDMTSEMTDLINVQRAYQLSARALTSSDSMM 262



 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 7/39 (17%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           ++ I+++NIAN  T G       Y+RK  SFE+++  +
Sbjct: 17 QKLDILADNIANLNTVG-------YKRKDASFEDLLTNA 48


>gi|121997317|ref|YP_001002104.1| flagellar basal-body rod protein FlgG [Halorhodospira halophila
           SL1]
 gi|121588722|gb|ABM61302.1| flagellar basal-body rod protein FlgG [Halorhodospira halophila
           SL1]
          Length = 261

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVN+  E  +M E  R +  N + I  + +M+ 
Sbjct: 216 QGALETSNVNIAEELVNMIENQRGFETNTRAISTTDEMLQ 255



 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANART 34
          MD    +  +A +GL  Q   MQ+ S N+AN  T
Sbjct: 1  MDP---ALWVAKTGLDAQQKSMQVTSNNLANVNT 31


>gi|154249603|ref|YP_001410428.1| hypothetical protein Fnod_0921 [Fervidobacterium nodosum Rt17-B1]
 gi|154153539|gb|ABS60771.1| protein of unknown function DUF1078 domain protein
           [Fervidobacterium nodosum Rt17-B1]
          Length = 250

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           G ++  NVNV+ E   M E +R Y A  + I    +++   ++
Sbjct: 202 GYIEKSNVNVVREMVKMIEAHRHYEATSKAIVVHDELLNKVIN 244


>gi|83589649|ref|YP_429658.1| hypothetical protein Moth_0797 [Moorella thermoacetica ATCC 39073]
 gi|83572563|gb|ABC19115.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
          Length = 253

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 82  PVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           P AN     G ++  NV++  E  DM    R Y AN + I+     +  +++
Sbjct: 196 PAANFQVKQGWLEESNVDLARELVDMLAVLRSYEANQKVIQTEDQTLAKSVN 247



 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 21/31 (67%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANART 34
          ++   ++A++G+ VQ  R  +IS N+ANA T
Sbjct: 1  MLRGLYLASTGMLVQEMRQDVISNNLANATT 31


>gi|317492428|ref|ZP_07950857.1| fagellar hook-basal body protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919767|gb|EFV41097.1| fagellar hook-basal body protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 414

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG V+  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 369 SGAVEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVNL 413



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 10/65 (15%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVK 64
           + A SGL   ++ + +I  NIAN++T G   GS       ++F ++  GS    GV+V 
Sbjct: 3  FNQAVSGLNAAASNLDVIGNNIANSQTVGFKSGS-------VTFADMFAGSKVGLGVKVA 55

Query: 65 KIGVD 69
           +  D
Sbjct: 56 SVQQD 60


>gi|152990358|ref|YP_001356080.1| flagellar basal-body rod protein FlgF [Nitratiruptor sp. SB155-2]
 gi|151422219|dbj|BAF69723.1| flagellar basal-body rod protein FlgF [Nitratiruptor sp. SB155-2]
          Length = 238

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 5/62 (8%)

Query: 77  FDPGH----PVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++P        A    G ++  N+N L+E  +M    R +      IK    +   T ++
Sbjct: 176 YEPQGNELTVDAKVRQGYLESSNINPLMEMTEMIMAQRRFDMYGNMIKSMDQLNQKTNEI 235

Query: 132 LR 133
            R
Sbjct: 236 GR 237


>gi|167645396|ref|YP_001683059.1| flagellar basal body rod protein FlgG [Caulobacter sp. K31]
 gi|167347826|gb|ABZ70561.1| flagellar basal-body rod protein FlgG [Caulobacter sp. K31]
          Length = 262

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             +  NV+ + E   +    R Y  N + I  +  M+ TT
Sbjct: 218 YTEASNVDSVSEITSLIVAQRAYEMNSKVITTADQMLQTT 257



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +   A +G+A Q   +++IS NIAN  T G       ++R    F+++++ +
Sbjct: 1  MQALRTAATGMAAQQLNVEVISNNIANMNTVG-------FKRGRAEFQDLLYQT 47


>gi|82702453|ref|YP_412019.1| flagellar hook protein FlgE [Nitrosospira multiformis ATCC 25196]
 gi|82410518|gb|ABB74627.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 406

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +G V+  NV +  E  +M    R+Y AN QTIK    ++ T ++L
Sbjct: 360 QAGAVEDSNVELTSELVNMITAQRVYQANAQTIKTQDQILQTVVNL 405



 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S     SGL   S  + +I  N+AN  T G
Sbjct: 2  SFQQGLSGLNAASKNLDVIGNNVANTNTVG 31


>gi|78485810|ref|YP_391735.1| hypothetical protein Tcr_1469 [Thiomicrospira crunogena XCL-2]
 gi|78364096|gb|ABB42061.1| Flagellar basal-body rod protein FlgG [Thiomicrospira crunogena
           XCL-2]
          Length = 263

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVN + E   M E  R Y  N + I  +  MM 
Sbjct: 218 QGALESSNVNTVEELIGMIEAQRTYEMNSKAISAADGMMQ 257



 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPG 40
          +  + ++A +GL  Q  R+  IS N+ANA T     G
Sbjct: 1  MNRALYVAKTGLEAQDFRLATISNNLANANTYAYKTG 37


>gi|218703527|ref|YP_002411046.1| flagellar basal body rod protein FlgG [Escherichia coli UMN026]
 gi|218430624|emb|CAR11490.1| Flagellar basal-body rod protein (flgG-like) (Distal rod protein)
           [Escherichia coli UMN026]
          Length = 303

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 17/36 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV+++ E   M    R Y  N + +  + DM+ 
Sbjct: 262 EGSNVDIVNEMVAMITVQRAYEMNAKMVSAADDMLQ 297



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ + + 
Sbjct: 43 MNAALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFYQTQ 91


>gi|187778756|ref|ZP_02995229.1| hypothetical protein CLOSPO_02351 [Clostridium sporogenes ATCC
          15579]
 gi|187772381|gb|EDU36183.1| hypothetical protein CLOSPO_02351 [Clostridium sporogenes ATCC
          15579]
          Length = 350

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          Y++ S +   SGL  Q  R+ I+  NIANA TT        ++ ++I F++++  +
Sbjct: 16 YMLRSMYSGISGLKAQQTRLDIVGNNIANANTTA-------FKSQSIRFQDMLSQN 64



 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  E  +M   NR + A  + I    +++   ++L R
Sbjct: 304 NGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVNLKR 350


>gi|332305617|ref|YP_004433468.1| flagellar basal-body rod protein FlgG [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172946|gb|AEE22200.1| flagellar basal-body rod protein FlgG [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 262

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVNV  E  ++ E+ RLY  N + I     M+   + 
Sbjct: 217 QGALETSNVNVTEELVNLIESQRLYEMNSKVISAVDSMLGQVIQ 260



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL      + +IS N+ANA T G       +++    FE++++ +
Sbjct: 7  ISKTGLDAAQTDVAVISNNLANASTVG-------FKKDRAIFEDLLYQN 48


>gi|54307270|ref|YP_128290.1| flagellar hook protein FlgE [Photobacterium profundum SS9]
 gi|46911690|emb|CAG18488.1| Hypothetical flagellar hook protein FlgE [Photobacterium profundum
           SS9]
          Length = 472

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +G+ +  NV++  E  ++      Y AN +TIK + +M  
Sbjct: 427 TGMYENSNVDLSSEMVNLMSAQSNYQANAKTIKVAQEMTQ 466



 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 13/69 (18%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------GG 60
          S +I  SGL   S +M  IS NIAN  T G       Y+     F+++           G
Sbjct: 2  SMNIGMSGLIATSEQMNSISHNIANVGTAG-------YKSSRTEFQDIYAPEFGGGEMNG 54

Query: 61 VRVKKIGVD 69
          V V  I   
Sbjct: 55 VEVAAIRQS 63


>gi|33596140|ref|NP_883783.1| flagellar hook protein FlgE [Bordetella parapertussis 12822]
 gi|33573143|emb|CAE36790.1| flagellar hook protein FlgE [Bordetella parapertussis]
          Length = 473

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y AN QTIK   ++M   +++
Sbjct: 432 EASNVDMSRELVNMIVAQRTYQANAQTIKTQDEVMQVLMNM 472



 Score = 40.7 bits (95), Expect = 0.072,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 10/57 (17%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKI 66
          SGL   S  + +I  NIAN+ T G   G+        SF +V   S    GV+V  I
Sbjct: 8  SGLNAASQNLDVIGNNIANSGTVGFKSGA-------ASFADVYASSRVGLGVKVSAI 57


>gi|89068728|ref|ZP_01156114.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
           HTCC2516]
 gi|89045691|gb|EAR51753.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
           HTCC2516]
          Length = 432

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E  D+  T R Y  N + +  + +M+  T  + R
Sbjct: 386 AGALEGSNVDIAEELTDLIATQRAYSTNAKVVTTADEMLDETTRIKR 432


>gi|109899400|ref|YP_662655.1| flagellar basal body rod protein FlgG [Pseudoalteromonas atlantica
           T6c]
 gi|109701681|gb|ABG41601.1| flagellar basal-body rod protein FlgG [Pseudoalteromonas atlantica
           T6c]
          Length = 262

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVNV  E  ++ E+ RLY  N + I     M+   + 
Sbjct: 217 QGALETSNVNVTEELVNLIESQRLYEMNSKVISAVDSMLGQVIQ 260



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL      + +IS N+ANA T G       +++    FE++++ +
Sbjct: 7  ISKTGLDAAQTDVAVISNNLANASTVG-------FKKDRAIFEDLLYQN 48


>gi|323490149|ref|ZP_08095369.1| fagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
 gi|323396197|gb|EGA89023.1| fagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
          Length = 255

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV++  E  +M    R + AN +TI  S +++   ++L R
Sbjct: 209 SGMLEMSNVDLTEEFTEMIIAQRGFQANSRTITTSDEILQEVMNLKR 255



 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 14/86 (16%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------HG 57
          ++ S +   SG+     ++ +I  NIAN  T G       Y++ TI+F++++       G
Sbjct: 1  MLRSMYSGVSGMKNFQTKLDVIGNNIANVNTIG-------YKKSTINFQDLLSQNMSNSG 53

Query: 58 SGGVRVKKIGVDQSTFVEEFDPGHPV 83
          +  ++V  +G   S      +PG  +
Sbjct: 54 TNPMQV-GLGTTTSAINVNHNPGSVM 78


>gi|187778686|ref|ZP_02995159.1| hypothetical protein CLOSPO_02281 [Clostridium sporogenes ATCC
          15579]
 gi|187772311|gb|EDU36113.1| hypothetical protein CLOSPO_02281 [Clostridium sporogenes ATCC
          15579]
          Length = 624

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L  + +I  SG+  Q   +   S NIANA T G       Y R+ +  +  
Sbjct: 4  MSGLFGTLNIGKSGMFAQQGAINTTSHNIANANTEG-------YSRQRVELQTT 50


>gi|90577344|ref|ZP_01233155.1| flagellar hook protein [Vibrio angustum S14]
 gi|90440430|gb|EAS65610.1| flagellar hook protein [Vibrio angustum S14]
          Length = 408

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S  IA SGL   + ++  IS NIAN  T+G       ++     F  V +G  +GGV V 
Sbjct: 2  SFDIALSGLDATNVQLNTISNNIANVSTSG-------FKESRTEFSAVYNGMQAGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 AI 56



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +G ++  NV++  E   +    R Y AN +TI  S  +  + 
Sbjct: 363 AGALEGSNVDLTSELVSLMTAQRNYQANAKTISTSDKLTQSL 404


>gi|322807049|emb|CBZ04623.1| flagellar hook-associated protein FlgK [Clostridium botulinum
          H04402 065]
          Length = 630

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L  + +I  SG+  Q   +   S NIANA T G       Y R+ +  +  
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGAINTTSHNIANANTEG-------YSRQRVELQTT 47


>gi|154253003|ref|YP_001413827.1| flagellar basal body rod protein FlgG [Parvibaculum lavamentivorans
           DS-1]
 gi|154156953|gb|ABS64170.1| flagellar basal-body rod protein FlgG [Parvibaculum lavamentivorans
           DS-1]
          Length = 261

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NVN + E   +    R Y  N + I  S +MM+ T
Sbjct: 216 QGFLETSNVNAVSEITSLITAQRAYEMNAKIITASDEMMSVT 257



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + S  IA +G+  Q   +++IS NIAN  TTG       ++R    F+++++ +
Sbjct: 1  MQSLSIAATGMMAQQLNVEVISNNIANMSTTG-------FKRGRAEFQDLLYQN 47


>gi|330889080|gb|EGH21741.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           mori str. 301020]
          Length = 100

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            NV+ + E  +M  T R Y  N + I  +  M+   
Sbjct: 61  SNVSTVEELVNMITTQRAYEMNSKVISTADQMLQNL 96


>gi|77359722|ref|YP_339297.1| flagellar hook protein FlgE [Pseudoalteromonas haloplanktis
          TAC125]
 gi|76874633|emb|CAI85854.1| flagellar biosynthesis; hook protein [Pseudoalteromonas
          haloplanktis TAC125]
          Length = 454

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG-GV 61
          S +IA SGLA     + + + NIAN  TTG        +D Y      F      +G GV
Sbjct: 2  SFNIALSGLAAAQKDLNVTANNIANVNTTGFKESRAEFADVYASS--VFSSGKTKNGDGV 59

Query: 62 RVKKIGV 68
          +   +  
Sbjct: 60 QTTMVAQ 66



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NVN+  E  D+    R + AN + ++ +  +  + L +
Sbjct: 413 EQSNVNLTNELVDLISAQRNFQANSRALEVNSTIQQSILQI 453


>gi|197335127|ref|YP_002156698.1| flagellar basal-body rod protein FlgG [Vibrio fischeri MJ11]
 gi|197316617|gb|ACH66064.1| flagellar basal-body rod protein FlgG [Vibrio fischeri MJ11]
          Length = 262

 Score = 50.7 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     M +
Sbjct: 219 MLEASNVNVTEELVNMIEAQRVYEMNSKVISAVDKMAS 256



 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 10/58 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    +  ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 1  MNP---ALWVSKTGLDAQQTNIATISNNLANASTVG-------FKKSRAVFEDLFYQN 48


>gi|167037660|ref|YP_001665238.1| hypothetical protein Teth39_1248 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116075|ref|YP_004186234.1| flagellar hook-basal body protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166856494|gb|ABY94902.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319929166|gb|ADV79851.1| flagellar hook-basal body protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 417

 Score = 50.7 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  DM  T R + AN + I  S +++   +++ R
Sbjct: 372 GTLEMSNVDLANEFTDMIVTQRGFQANARVITASDEILQDLVNMKR 417



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL    ARM +I  NIAN  T G       Y+   ++F+E+   +
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVG-------YKASRMTFKEIFSQT 48


>gi|297530598|ref|YP_003671873.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
 gi|297253850|gb|ADI27296.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
          Length = 288

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R + AN + I  S +++   ++L
Sbjct: 242 SGALEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVNL 286


>gi|326202442|ref|ZP_08192311.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
 gi|325987560|gb|EGD48387.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
          Length = 270

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV V+ E   +    R Y  + + I+ S DM+    +L R
Sbjct: 223 KQGFLESSNVQVVDEMVKLIVAQRAYEVSSKAIQSSDDMLQIANNLRR 270



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ + + A SG+  Q   + +IS N+AN  TTG       Y+++   F+++++ +
Sbjct: 1  MMRALYTAGSGMKAQQFNVDVISNNLANVNTTG-------YKKERAEFKDLLYQT 48


>gi|51598543|ref|YP_072731.1| flagellar hook protein FlgE [Borrelia garinii PBi]
 gi|51573114|gb|AAU07139.1| flagellar hook protein [Borrelia garinii PBi]
          Length = 442

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 38.0 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|283834455|ref|ZP_06354196.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220]
 gi|291070002|gb|EFE08111.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220]
          Length = 400

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +SG+++  NV++  E  ++    R Y AN + I  S  +      
Sbjct: 354 SSGMLESSNVDITNELVNLMTAQRNYQANTKVISTSTQLDQALFQ 398



 Score = 41.5 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA +GL   + ++  IS NIAN+ T G       Y+  T  F  +  G+  + V   
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANSGTVG-------YKSMTTQFSAMYAGTQAMGVSVA 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GSAQS 59


>gi|322421726|ref|YP_004200949.1| flagellar hook-basal body protein [Geobacter sp. M18]
 gi|320128113|gb|ADW15673.1| flagellar hook-basal body protein [Geobacter sp. M18]
          Length = 294

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M  T R Y AN +TI  +  M    L L+R
Sbjct: 252 EQSNVDMASEFVKMIVTQRAYSANSKTITTTDQMTQEVLQLIR 294


>gi|170742325|ref|YP_001770980.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46]
 gi|168196599|gb|ACA18546.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46]
          Length = 263

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN + E + +    R Y  N + +  +  M++TT  + R
Sbjct: 218 YLEEANVNAVTEISSLIAAQRAYEMNSKVVTAADQMLSTTSQMFR 262



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A +G+A Q   +Q+IS NIAN RTTG       Y+R+   F+++++ +
Sbjct: 7  AATGMAAQELNVQVISNNIANLRTTG-------YKRQQAHFQDLLYQN 47


>gi|326389474|ref|ZP_08211041.1| fagellar hook-basal body protein [Thermoanaerobacter ethanolicus
          JW 200]
 gi|325994479|gb|EGD52904.1| fagellar hook-basal body protein [Thermoanaerobacter ethanolicus
          JW 200]
          Length = 417

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL    ARM +I  NIAN  T G       Y+   ++F+E+   +
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVG-------YKASRMTFKEIFSQT 48



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E ADM  T R + AN + I  S +++   +++ R
Sbjct: 372 GTLEMSNVDLSNEFADMIVTQRGFQANAKVITVSDEILQDLVNMKR 417


>gi|320179222|gb|EFW54180.1| Flagellar basal-body rod protein FlgG [Shigella boydii ATCC 9905]
          Length = 54

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I+S  IA +GL  Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 48


>gi|1184296|gb|AAA87351.1| flagellar hook protein [Borrelia burgdorferi]
          Length = 442

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440


>gi|312147981|gb|ADQ30640.1| flagellar hook protein FlgE [Borrelia burgdorferi JD1]
          Length = 442

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|318604252|emb|CBY25750.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 397

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +G ++  NV++  E   +    R Y AN + I  +  MM     +L
Sbjct: 352 AGALEASNVDLTAELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 397



 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IAN+GL+  + ++  IS NIAN+ T G       ++     F  +   S  + V   
Sbjct: 2  SFSIANTGLSAVTEQLNTISNNIANSGTKG-------FKSGRTEFASMYAQSQPLGVGVS 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTSQS 59


>gi|256750749|ref|ZP_05491634.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256750332|gb|EEU63351.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 417

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  DM  T R + AN + I  S +++   +++ R
Sbjct: 372 GTLEMSNVDLANEFTDMIVTQRGFQANARVITASDEILQDLVNMKR 417



 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL    ARM +I  NIAN  T G       Y+   ++F+E+   +
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVG-------YKASRMTFKEIFSQT 48


>gi|59712479|ref|YP_205255.1| flagellar basal body rod protein FlgG [Vibrio fischeri ES114]
 gi|59480580|gb|AAW86367.1| flagellar distal rod protein FlgG [Vibrio fischeri ES114]
          Length = 262

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +++  NVNV  E  +M E  R+Y  N + I     M +
Sbjct: 219 MLEASNVNVTEELVNMIEAQRVYEMNSKVISAVDKMAS 256



 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 10/58 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    +  ++ +GL  Q   +  IS N+ANA T G       +++    FE++ + +
Sbjct: 1  MNP---ALWVSKTGLDAQQTNIATISNNLANASTVG-------FKKSRAVFEDLFYQN 48


>gi|262653|gb|AAB24739.1| flagellar basal body distal rod protein [Caulobacter vibrioides]
          Length = 262

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV+ + E   +    R Y  N + I  +  M+  T  L
Sbjct: 220 EASNVDAVSEITALITAQRAYEMNSKVISTADQMLQATSQL 260



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +   A SG+A Q   +++IS NIAN  T G       ++R+   F+++++ +
Sbjct: 1  MQALRTAASGMAAQQLNVEVISNNIANMNTVG-------FKRQRAEFQDLLYQT 47


>gi|328948413|ref|YP_004365750.1| flagellar hook-basal body protein [Treponema succinifaciens DSM
           2489]
 gi|328448737|gb|AEB14453.1| flagellar hook-basal body protein [Treponema succinifaciens DSM
           2489]
          Length = 463

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  +  DM  T R + +N +TI+    M+ T L L R
Sbjct: 417 SGTLEMSNVDLTEQLTDMIVTQRGFESNAKTIQTGDSMLETVLGLKR 463



 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM +I  NI+N  T G   G   ++
Sbjct: 1  MMRSLYAGVSGLQNHQTRMDVIGNNISNVNTYGFKKGRATFQ 42


>gi|224533123|ref|ZP_03673723.1| flagellar hook protein FlgE [Borrelia burgdorferi WI91-23]
 gi|224511850|gb|EEF82251.1| flagellar hook protein FlgE [Borrelia burgdorferi WI91-23]
 gi|312149691|gb|ADQ29762.1| flagellar hook protein FlgE [Borrelia burgdorferi N40]
          Length = 442

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|300817268|ref|ZP_07097486.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
 gi|300530244|gb|EFK51306.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
          Length = 261

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 17/36 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV+++ E   M    R Y  N + +  + DM+ 
Sbjct: 220 EGSNVDIVNEMVAMITVQRAYEMNAKMVSAADDMLQ 255



 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ + + 
Sbjct: 8  SKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFYQTQ 49


>gi|239906284|ref|YP_002953024.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
 gi|239796149|dbj|BAH75138.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
          Length = 518

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  ++    R + AN + +  +  +M T L +
Sbjct: 478 SNVDMASEMVNLIINQRAFQANSKVVTTAESLMETALQI 516


>gi|332162901|ref|YP_004299478.1| Lateral flagellar hook protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667131|gb|ADZ43775.1| Lateral flagellar hook protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863351|emb|CBX73474.1| flagellar hook protein flgE [Yersinia enterocolitica W22703]
          Length = 397

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +G ++  NV++  E   +    R Y AN + I  +  MM     +L
Sbjct: 352 AGALEASNVDLTAELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 397



 Score = 40.7 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IAN+GL+  + ++  IS NIAN+ T G       ++     F  +   S  + V   
Sbjct: 2  SFSIANTGLSAVTEQLNTISNNIANSGTKG-------FKSGRTEFASMYAQSQPLGVGVS 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTSQS 59


>gi|283784086|ref|YP_003363951.1| lateral flagellar rod protein [Citrobacter rodentium ICC168]
 gi|282947540|emb|CBG87093.1| lateral flagellar rod protein [Citrobacter rodentium ICC168]
          Length = 261

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 17/36 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV+++ E   M    R Y  N + +  + DM+ 
Sbjct: 220 EGSNVDIVNEMVAMITVQRAYEMNAKMVSAADDMLQ 255



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ + + 
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFYQTQ 49


>gi|218249383|ref|YP_002374806.1| flagellar hook protein FlgE [Borrelia burgdorferi ZS7]
 gi|218164571|gb|ACK74632.1| flagellar hook protein FlgE [Borrelia burgdorferi ZS7]
          Length = 442

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|195941363|ref|ZP_03086745.1| flagellar hook protein FlgE [Borrelia burgdorferi 80a]
 gi|221217779|ref|ZP_03589247.1| flagellar hook protein FlgE [Borrelia burgdorferi 72a]
 gi|224533707|ref|ZP_03674295.1| flagellar hook protein FlgE [Borrelia burgdorferi CA-11.2a]
 gi|225549062|ref|ZP_03770037.1| flagellar hook protein FlgE [Borrelia burgdorferi 94a]
 gi|225550122|ref|ZP_03771082.1| flagellar hook protein FlgE [Borrelia burgdorferi 118a]
 gi|226320584|ref|ZP_03796144.1| flagellar hook protein FlgE [Borrelia burgdorferi 29805]
 gi|221192456|gb|EEE18675.1| flagellar hook protein FlgE [Borrelia burgdorferi 72a]
 gi|224513000|gb|EEF83363.1| flagellar hook protein FlgE [Borrelia burgdorferi CA-11.2a]
 gi|225369234|gb|EEG98687.1| flagellar hook protein FlgE [Borrelia burgdorferi 118a]
 gi|225370288|gb|EEG99726.1| flagellar hook protein FlgE [Borrelia burgdorferi 94a]
 gi|226234003|gb|EEH32724.1| flagellar hook protein FlgE [Borrelia burgdorferi 29805]
          Length = 442

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|330953727|gb|EGH53987.1| flagellar basal body rod protein FlgG [Pseudomonas syringae Cit 7]
          Length = 148

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            NV+ + E  +M  T R Y  N + I  +  M+   
Sbjct: 109 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLQNL 144


>gi|196247630|ref|ZP_03146332.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           G11MC16]
 gi|196212414|gb|EDY07171.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           G11MC16]
          Length = 264

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 82  PVANASG-IV----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P AN +G +V    +  NV++  E  +M    R + AN + I  S +++   ++L
Sbjct: 208 PGANGTGKLVSGALEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVNL 262


>gi|254699461|ref|ZP_05161289.1| flagellar basal body rod protein FlgG [Brucella suis bv. 5 str.
          513]
 gi|261749912|ref|ZP_05993621.1| predicted protein [Brucella suis bv. 5 str. 513]
 gi|261739665|gb|EEY27591.1| predicted protein [Brucella suis bv. 5 str. 513]
          Length = 77

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ S
Sbjct: 1  MKALTIAATGMNAQQLNLEVIANNIANINTTG-------FKRARAEFTDLLYQS 47


>gi|216264643|ref|ZP_03436635.1| flagellar hook protein FlgE [Borrelia burgdorferi 156a]
 gi|215981116|gb|EEC21923.1| flagellar hook protein FlgE [Borrelia burgdorferi 156a]
          Length = 442

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|331666548|ref|ZP_08367422.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
 gi|331065772|gb|EGI37656.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
          Length = 261

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 17/36 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV+++ E   M    R Y  N + +  + DM+ 
Sbjct: 220 EGSNVDIVNEMVAMITVQRAYEMNAKMVSAADDMLQ 255



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ + + 
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFYQTQ 49


>gi|237817502|ref|ZP_04596493.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
 gi|237787337|gb|EEP61554.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
          Length = 456

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
           L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 63  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 115

Query: 57  GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
            SG V   V+    DQ              + +G   V+ P
Sbjct: 116 NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGP 156



 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 410 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNLKR 456


>gi|212639558|ref|YP_002316078.1| flagellar hook protein FlgE [Anoxybacillus flavithermus WK1]
 gi|212561038|gb|ACJ34093.1| Flagellar hook protein FlgE [Anoxybacillus flavithermus WK1]
          Length = 460

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R + AN + I  S +++   ++L
Sbjct: 414 SGALEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVNL 458


>gi|138894748|ref|YP_001125201.1| flagellar basal body rod protein FlgG [Geobacillus
           thermodenitrificans NG80-2]
 gi|134266261|gb|ABO66456.1| Flagellar hook protein [Geobacillus thermodenitrificans NG80-2]
          Length = 264

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 82  PVANASG-IV----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P AN +G +V    +  NV++  E  +M    R + AN + I  S +++   ++L
Sbjct: 208 PGANGTGKLVSGALEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVNL 262


>gi|15594628|ref|NP_212417.1| flagellar hook protein FlgE [Borrelia burgdorferi B31]
 gi|223889009|ref|ZP_03623600.1| flagellar hook protein FlgE [Borrelia burgdorferi 64b]
 gi|226321601|ref|ZP_03797127.1| flagellar hook protein FlgE [Borrelia burgdorferi Bol26]
 gi|2494528|sp|Q44767|FLGE_BORBU RecName: Full=Flagellar hook protein flgE
 gi|1165267|gb|AAA85606.1| FlgE [Borrelia burgdorferi]
 gi|2688183|gb|AAC66665.1| flagellar hook protein (flgE) [Borrelia burgdorferi B31]
 gi|223885825|gb|EEF56924.1| flagellar hook protein FlgE [Borrelia burgdorferi 64b]
 gi|226232790|gb|EEH31543.1| flagellar hook protein FlgE [Borrelia burgdorferi Bol26]
          Length = 442

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|288962673|ref|YP_003452967.1| flagellar hook protein [Azospirillum sp. B510]
 gi|288914939|dbj|BAI76423.1| flagellar hook protein [Azospirillum sp. B510]
          Length = 427

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          L ++     SG+A QS+R+  IS+NI+N++T G       Y+R T+ F  ++   G
Sbjct: 3  LYSAMRSGVSGMAAQSSRLAAISDNISNSQTVG-------YKRATVDFSTLVTAPG 51



 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   + ET R Y ++   ++ + +M+  T  L R
Sbjct: 385 EQSNVDIATELVSLIETQRAYSSSATLVRTTDEMVEETTRLKR 427


>gi|260429403|ref|ZP_05783380.1| flagellar basal-body rod protein FlgG [Citreicella sp. SE45]
 gi|260420026|gb|EEX13279.1| flagellar basal-body rod protein FlgG [Citreicella sp. SE45]
          Length = 261

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  IA +G++ Q  R+++IS N++N  TTG       Y  +   F ++
Sbjct: 1  MRALKIAATGMSAQQMRVEVISNNLSNMSTTG-------YNARRAEFADL 43



 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  +V+ + E  ++ E  R Y  N + I  +  M+  T+ 
Sbjct: 216 QGYLEDSSVDPVYEITELIEAQRGYELNSKVISAADQMLGATVQ 259


>gi|219684598|ref|ZP_03539541.1| flagellar hook protein FlgE [Borrelia garinii PBr]
 gi|219671960|gb|EED29014.1| flagellar hook protein FlgE [Borrelia garinii PBr]
          Length = 442

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|160901599|ref|YP_001567180.1| hypothetical protein Pmob_0108 [Petrotoga mobilis SJ95]
 gi|160359243|gb|ABX30857.1| protein of unknown function DUF1078 domain protein [Petrotoga
           mobilis SJ95]
          Length = 702

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  +M    R + AN ++I  +  ++   +++ R
Sbjct: 657 GALEMSNVDLAEEFTNMIIAQRGFQANSRSITTADAILNELVNIKR 702



 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S +   +GL     ++ I++ NIAN  T G       Y+    +F+  +
Sbjct: 1  MLRSMYSGITGLRNFQDQLDIVANNIANVNTVG-------YKGSRATFQTTL 45


>gi|219685755|ref|ZP_03540566.1| flagellar hook protein FlgE [Borrelia garinii Far04]
 gi|219672694|gb|EED29722.1| flagellar hook protein FlgE [Borrelia garinii Far04]
          Length = 442

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 38.0 bits (88), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|225552055|ref|ZP_03772995.1| flagellar hook protein FlgE [Borrelia sp. SV1]
 gi|225371053|gb|EEH00483.1| flagellar hook protein FlgE [Borrelia sp. SV1]
          Length = 442

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 38.0 bits (88), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|120613370|ref|YP_973048.1| flagellar basal body rod protein [Acidovorax citrulli AAC00-1]
 gi|120591834|gb|ABM35274.1| flagellar basal body rod protein [Acidovorax citrulli AAC00-1]
          Length = 100

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 40/117 (34%), Gaps = 30/117 (25%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           GL     ++   + N+AN  T G       +RR+T+    V    GGV  +         
Sbjct: 11  GLRAAQLQLDTSAHNVANMNTEG-------FRRQTVEQSAVPD-QGGVEARV-------G 55

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               +   P A+A                D       + ANLQ +K    M+ + LD
Sbjct: 56  RAAVEGASPEADA---------------VDQMSATYAFSANLQMVKTEDRMLGSLLD 97


>gi|91225873|ref|ZP_01260842.1| flagellar hook protein E [Vibrio alginolyticus 12G01]
 gi|269965424|ref|ZP_06179543.1| flagellar hook protein [Vibrio alginolyticus 40B]
 gi|91189523|gb|EAS75799.1| flagellar hook protein E [Vibrio alginolyticus 12G01]
 gi|269829903|gb|EEZ84133.1| flagellar hook protein [Vibrio alginolyticus 40B]
          Length = 437

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G+++  N+++  E  D+    R + AN ++++  + +    L +
Sbjct: 392 NGMLEQSNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQI 436



 Score = 41.5 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG 36
          ++ SGL+     +   S NIANA T G
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTYG 30


>gi|225181584|ref|ZP_03735025.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1]
 gi|225167692|gb|EEG76502.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1]
          Length = 259

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV++  E   +    R +  N + ++ + +M +    L R
Sbjct: 212 SQGYLESSNVDLAAEMTQLIINQRSFELNSRALRTAEEMWSIANQLYR 259



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A  G+  Q  ++ + + NIAN  TTG       Y++KT  F ++++ S
Sbjct: 9  AAGGMRAQQQKIDVTAHNIANVNTTG-------YKKKTTLFSDLVYQS 49


>gi|302878276|ref|YP_003846840.1| fagellar hook-basal body protein [Gallionella capsiferriformans
           ES-2]
 gi|302581065|gb|ADL55076.1| fagellar hook-basal body protein [Gallionella capsiferriformans
           ES-2]
          Length = 498

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV++  E  +M    R+Y AN QTIK    ++  T+  LR
Sbjct: 459 SNVDLTAELVNMITAQRVYQANAQTIKTQDSLLQ-TITSLR 498


>gi|332140547|ref|YP_004426285.1| flagellar basal-body rod protein FlgF [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550569|gb|AEA97287.1| flagellar basal-body rod protein FlgF [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 247

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NVN + E  DM    R Y   ++ +KQ+  +  +   LLR
Sbjct: 199 SGMLEGSNVNAVDEMVDMISLQRHYELQVKMMKQAEKLDQSGNALLR 245


>gi|260866415|ref|YP_003232817.1| putative lateral flagellar component of cell-distal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|257762771|dbj|BAI34266.1| predicted lateral flagellar component of cell-distal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|323178492|gb|EFZ64070.1| flagellar basal-body rod protein FlgG [Escherichia coli 1180]
          Length = 261

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 17/36 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV+++ E   M    R Y  N + +  + DM+ 
Sbjct: 220 EGSNVDIVNEMVAMITVQRAYEMNAKMVSAADDMLQ 255



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ + +
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFYQT 48


>gi|170722889|ref|YP_001750577.1| flagellar basal body rod protein FlgG [Pseudomonas putida W619]
 gi|169760892|gb|ACA74208.1| flagellar basal-body rod protein FlgG [Pseudomonas putida W619]
          Length = 261

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NV+ + E  +M  T R Y  N + I  +  M++
Sbjct: 222 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFQDLLYQ 47


>gi|94968673|ref|YP_590721.1| flagellar basal body FlaE [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550723|gb|ABF40647.1| flagellar basal body FlaE [Candidatus Koribacter versatilis
           Ellin345]
          Length = 409

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E +++    R Y AN + I    ++   T++L R
Sbjct: 367 ELSNVDMATEFSNLIVAQRGYQANAKVITTFDEITQDTINLKR 409



 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 7/53 (13%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            I  SGL   S  +  I+ N+AN  T G       Y++    F ++ +   G
Sbjct: 4  FSIPLSGLTASSTALATIANNLANQNTIG-------YKQTRALFRDLFYQQIG 49


>gi|307264876|ref|ZP_07546438.1| fagellar hook-basal body protein [Thermoanaerobacter wiegelii
          Rt8.B1]
 gi|306920134|gb|EFN50346.1| fagellar hook-basal body protein [Thermoanaerobacter wiegelii
          Rt8.B1]
          Length = 417

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL    ARM +I  NIAN  T G       Y+   ++F+E+   +
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVG-------YKASRMTFKEIFSQT 48



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E ADM  T R + AN + I  S +++   +++ R
Sbjct: 372 GTLEMSNVDLSNEFADMIVTQRGFQANAKVITVSDEILQDLVNMKR 417


>gi|225620642|ref|YP_002721900.1| flagellar basal body rod protein [Brachyspira hyodysenteriae WA1]
 gi|225215462|gb|ACN84196.1| flagellar basal body rod protein [Brachyspira hyodysenteriae WA1]
          Length = 282

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            ++  NVN + E   M E  R Y  N +TI     ++   + ++ R
Sbjct: 236 FLEMSNVNPINEMVRMIEVQRAYELNSKTISTHDTLVGRVINEVGR 281



 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 7/42 (16%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
           SG+  + AR+ +++ N+AN       PG   ++R T+SF+ 
Sbjct: 9  ASGMMAEQARLDVVANNLANVD----KPG---FKRDTVSFKA 43


>gi|225569971|ref|ZP_03778996.1| hypothetical protein CLOHYLEM_06066 [Clostridium hylemonae DSM
           15053]
 gi|225161441|gb|EEG74060.1| hypothetical protein CLOHYLEM_06066 [Clostridium hylemonae DSM
           15053]
          Length = 294

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV +  + A M  T R Y AN + I  + +M+   +++ R
Sbjct: 250 YLEMSNVELASDMASMITTQRGYQANSKIITVTDEMLEQLVNMKR 294



 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A +GL    ++M +IS NIAN  T G       Y+ ++ +F++ M+ +
Sbjct: 1  MVKSMYAAIAGLRSHQSKMDVISNNIANVNTWG-------YKSRSANFQDAMYQN 48


>gi|163852464|ref|YP_001640507.1| flagellar basal-body rod protein FlgG [Methylobacterium extorquens
           PA1]
 gi|218531220|ref|YP_002422036.1| flagellar basal-body rod protein FlgG [Methylobacterium
           chloromethanicum CM4]
 gi|240139801|ref|YP_002964278.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254562216|ref|YP_003069311.1| cell-distal portion of basal-body rod biosynthesis protein
           [Methylobacterium extorquens DM4]
 gi|163664069|gb|ABY31436.1| flagellar basal-body rod protein FlgG [Methylobacterium extorquens
           PA1]
 gi|218523523|gb|ACK84108.1| flagellar basal-body rod protein FlgG [Methylobacterium
           chloromethanicum CM4]
 gi|240009775|gb|ACS41001.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254269494|emb|CAX25460.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens DM4]
          Length = 263

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN + E + +    R Y  N + +  +  M++TT  + R
Sbjct: 218 YLEEANVNAVTEISSLIAAQRAYEMNSKVVTAADQMLSTTSQMFR 262



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A +G+A Q   +Q+IS NIAN RTTG       Y+R+ + F+++++ +
Sbjct: 7  AATGMAAQELNVQVISNNIANLRTTG-------YKRQQVHFQDLLYQN 47


>gi|85859175|ref|YP_461377.1| flagellar hook protein [Syntrophus aciditrophicus SB]
 gi|85722266|gb|ABC77209.1| flagellar hook protein [Syntrophus aciditrophicus SB]
          Length = 518

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  N +V +E  +M    R Y A+ + I  S +M+T  +++ R
Sbjct: 476 EQSNTDVSMEFVNMINAQRAYQASARIITTSDEMLTELMNIKR 518



 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 7/56 (12%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           +  +  I  +GL     +M II  N+AN+ T G       Y+     F  ++  S
Sbjct: 11 EMSNALWIGTTGLNASQRQMDIIGNNLANSSTLG-------YKSADTQFANMLSQS 59


>gi|331269322|ref|YP_004395814.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
 gi|329125872|gb|AEB75817.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
          Length = 491

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NV++  +  DM  T R + A+ + I    +++   ++L R
Sbjct: 445 QGMLEMSNVDLAEQFTDMIVTTRAFQASGKMISTGDEILQDIINLKR 491



 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 7/51 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          SG+ V   ++ +   NIAN  TTG       ++   + F++++  + G  V
Sbjct: 6  SGMKVNQTKLDVTGNNIANVSTTG-------FKSSRVRFKDMLSQNMGEAV 49


>gi|170680582|ref|YP_001742375.1| flagellar basal body rod protein FlgG [Escherichia coli SMS-3-5]
 gi|256020230|ref|ZP_05434095.1| flagellar basal body rod protein FlgG [Shigella sp. D9]
 gi|260853468|ref|YP_003227359.1| putative lateral flagellar component of cell-distal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|293403357|ref|ZP_06647448.1| flgG [Escherichia coli FVEC1412]
 gi|293408369|ref|ZP_06652208.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|298378968|ref|ZP_06988849.1| flagellar basal-body rod protein FlgG [Escherichia coli FVEC1302]
 gi|300900357|ref|ZP_07118533.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300936128|ref|ZP_07151067.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|306813301|ref|ZP_07447494.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|307313517|ref|ZP_07593138.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|331645420|ref|ZP_08346524.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|332281392|ref|ZP_08393805.1| lateral flagellar rod protein [Shigella sp. D9]
 gi|59889782|emb|CAH19138.1| Lateral flagellar rod protein (FlgG-like) [Escherichia coli]
 gi|170518300|gb|ACB16478.1| lateral flagellar rod protein LfgG [Escherichia coli SMS-3-5]
 gi|257752117|dbj|BAI23619.1| predicted lateral flagellar component of cell-distal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|284920046|emb|CBG33103.1| lateral flagellar rod protein (FlgG-like) [Escherichia coli 042]
 gi|291429210|gb|EFF02230.1| flgG [Escherichia coli FVEC1412]
 gi|291471547|gb|EFF14030.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|298280081|gb|EFI21585.1| flagellar basal-body rod protein FlgG [Escherichia coli FVEC1302]
 gi|300356125|gb|EFJ71995.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300458706|gb|EFK22199.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|305854064|gb|EFM54503.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|306906685|gb|EFN37196.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|315059544|gb|ADT73871.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli W]
 gi|323158101|gb|EFZ44200.1| flagellar basal-body rod protein FlgG [Escherichia coli EPECa14]
 gi|323171066|gb|EFZ56715.1| flagellar basal-body rod protein FlgG [Escherichia coli LT-68]
 gi|323191540|gb|EFZ76801.1| flagellar basal-body rod protein FlgG [Escherichia coli RN587/1]
 gi|323379897|gb|ADX52165.1| flagellar basal-body rod protein FlgG [Escherichia coli KO11]
 gi|323975928|gb|EGB71022.1| flagellar basal-body rod protein FlgG [Escherichia coli TW10509]
 gi|327254556|gb|EGE66172.1| flagellar basal-body rod protein FlgG [Escherichia coli STEC_7v]
 gi|331045582|gb|EGI17708.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|332103744|gb|EGJ07090.1| lateral flagellar rod protein [Shigella sp. D9]
          Length = 261

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 17/36 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV+++ E   M    R Y  N + +  + DM+ 
Sbjct: 220 EGSNVDIVNEMVAMITVQRAYEMNAKMVSAADDMLQ 255



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ + + 
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFYQTQ 49


>gi|26991074|ref|NP_746499.1| flagellar basal body rod protein FlgG [Pseudomonas putida KT2440]
 gi|24986108|gb|AAN69963.1|AE016634_12 flagellar basal-body rod protein FlgG [Pseudomonas putida KT2440]
          Length = 261

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NV+ + E  +M  T R Y  N + I  +  M++
Sbjct: 222 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F ++++ 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFADLLYQ 47


>gi|28897552|ref|NP_797157.1| flagellar hook protein FlgE [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839685|ref|ZP_01992352.1| FlgE [Vibrio parahaemolyticus AQ3810]
 gi|260364611|ref|ZP_05777213.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030]
 gi|260878284|ref|ZP_05890639.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034]
 gi|260898114|ref|ZP_05906610.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466]
 gi|5361008|gb|AAD42915.1|U12817_9 polar flagellar FlgE homolog [Vibrio parahaemolyticus]
 gi|28805764|dbj|BAC59041.1| polar flagellar FlgE [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746795|gb|EDM57783.1| FlgE [Vibrio parahaemolyticus AQ3810]
 gi|308086119|gb|EFO35814.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466]
 gi|308090147|gb|EFO39842.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034]
 gi|308115102|gb|EFO52642.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030]
 gi|328473453|gb|EGF44301.1| flagellar hook protein FlgE [Vibrio parahaemolyticus 10329]
          Length = 437

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G+++  N+++  E  D+    R + AN ++++  + +    L +
Sbjct: 392 NGMLEQSNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQI 436



 Score = 41.5 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG 36
          ++ SGL+     +   S NIANA T G
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTYG 30


>gi|291280096|ref|YP_003496931.1| flagellar hook protein FlgE [Deferribacter desulfuricans SSM1]
 gi|290754798|dbj|BAI81175.1| flagellar hook protein FlgE [Deferribacter desulfuricans SSM1]
          Length = 817

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV++  E  +M  T R + AN + I  S +++   ++L R
Sbjct: 777 SNVDLAREFVNMITTQRGFQANSRVITTSDELLQELMNLKR 817



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 7/43 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          +GL      M +I  NIAN  T G       Y+   I F++++
Sbjct: 10 TGLNEHQKSMDVIGNNIANVNTVG-------YKTSRIVFQDLL 45


>gi|269792937|ref|YP_003317841.1| hypothetical protein Taci_1328 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100572|gb|ACZ19559.1| protein of unknown function DUF1078 domain protein
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 636

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++    R + AN + I  S  ++   ++L R
Sbjct: 594 EMSNVDLSQEFVNLIVAQRGFQANARVITTSDQVLEELINLKR 636



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SG+      + ++  NIAN  TTG       ++R  + F+++++ +
Sbjct: 1  MLRSLYSGVSGVKGHQTYLDVVGNNIANVNTTG-------FKRSNVLFQDLLYQN 48


>gi|315125986|ref|YP_004067989.1| flagellar basal-body rod FlgG [Pseudoalteromonas sp. SM9913]
 gi|315014500|gb|ADT67838.1| flagellar basal-body rod FlgG [Pseudoalteromonas sp. SM9913]
          Length = 261

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           ++  NV+V+ E   M    R Y  N + +  + +M+ 
Sbjct: 219 IEGSNVSVVDEMVSMIAVQRAYEMNAKVVSAADEMLR 255



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 10/71 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---HGSGG 60
          + ++  ++ +GLA Q  RM  IS N+AN  T G       +++    FE++        G
Sbjct: 1  MNSALWVSKTGLAAQDLRMTTISNNLANVSTAG-------FKKDRAVFEDLFYQVQKQPG 53

Query: 61 VRVKKIGVDQS 71
           +V ++    S
Sbjct: 54 AQVDELNQLPS 64


>gi|296134368|ref|YP_003641615.1| flagellar basal-body rod protein FlgF [Thermincola sp. JR]
 gi|296032946|gb|ADG83714.1| flagellar basal-body rod protein FlgF [Thermincola potens JR]
          Length = 251

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 18/40 (45%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NVN + E  D+    R Y AN + I+     +   ++
Sbjct: 206 ETSNVNPVQEMVDLITIMRAYEANQKMIQAHDQTLGQAIN 245



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          +I   + + +G+  +SAR  + + N+AN  TTG       Y++    F+ 
Sbjct: 1  MIRGLYTSAAGMLAESARNDVAANNLANVNTTG-------YKKDAAVFKS 43


>gi|89072315|ref|ZP_01158894.1| flagellar hook protein [Photobacterium sp. SKA34]
 gi|89051847|gb|EAR57299.1| flagellar hook protein [Photobacterium sp. SKA34]
          Length = 398

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S  IA SGL   + ++  IS NIAN  T+G       ++     F  V +G  +GGV V 
Sbjct: 2  SFDIALSGLDATNIQLNTISNNIANVSTSG-------FKESRTEFSAVYNGMQAGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 AI 56



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +G ++  NV++  E   +    R Y AN +TI  S  +  + 
Sbjct: 353 AGALEGSNVDLTSELVSLMTAQRNYQANAKTISTSDKLTQSL 394


>gi|260901953|ref|ZP_05910348.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037]
 gi|308106765|gb|EFO44305.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037]
          Length = 437

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G+++  N+++  E  D+    R + AN ++++  + +    L +
Sbjct: 392 NGMLEQSNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQI 436



 Score = 41.5 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG 36
          ++ SGL+     +   S NIANA T G
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTYG 30


>gi|225628428|ref|ZP_03786462.1| flagellar hook protein FlgE [Brucella ceti str. Cudo]
 gi|225616274|gb|EEH13322.1| flagellar hook protein FlgE [Brucella ceti str. Cudo]
          Length = 456

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
           L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 63  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 115

Query: 57  GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
            SG V   V+    DQ              + +G   V+ P
Sbjct: 116 NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGP 156



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 410 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 456


>gi|254230140|ref|ZP_04923535.1| FlgE [Vibrio sp. Ex25]
 gi|262394939|ref|YP_003286793.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
 gi|151937333|gb|EDN56196.1| FlgE [Vibrio sp. Ex25]
 gi|262338533|gb|ACY52328.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
          Length = 437

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G+++  N+++  E  D+    R + AN ++++  + +    L +
Sbjct: 392 NGMLEQSNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQI 436



 Score = 41.5 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG 36
          ++ SGL+     +   S NIANA T G
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTYG 30


>gi|253996319|ref|YP_003048383.1| flagellar hook protein FlgE [Methylotenera mobilis JLW8]
 gi|253982998|gb|ACT47856.1| flagellar basal body FlaE domain protein [Methylotenera mobilis
           JLW8]
          Length = 421

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R+Y AN QTIK    ++ T ++L
Sbjct: 379 VEDSNVDLTAELVNMITAQRVYQANAQTIKTQDQVLQTLVNL 420


>gi|125972983|ref|YP_001036893.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
           ATCC 27405]
 gi|125713208|gb|ABN51700.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
           ATCC 27405]
          Length = 134

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 40/110 (36%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GGVRVK------ 64
           L     R + IS+NIAN  TTG       Y+RKT++FEE ++ +     G+R +      
Sbjct: 16  LDAALLRNEAISQNIANVDTTG-------YKRKTVAFEEYLNDARAKIKGIRTRPEHIPV 68

Query: 65  ----------KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                     K+  D+S+     D               NV++  E A M
Sbjct: 69  GARDVMDIDIKVSEDRSSLSMRLDEN-------------NVDIEEEMAQM 105


>gi|295696121|ref|YP_003589359.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
 gi|295411723|gb|ADG06215.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
          Length = 265

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M    R + AN +TI     M+   ++L R
Sbjct: 219 SGALEMSNVDLTNEFTEMIIAQRAFQANARTITSDDQMLQEVVNLKR 265



 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 7/48 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          ++ S + A SG+     +M +I  NIAN  T G       ++   + F
Sbjct: 1  MMRSLYSAVSGMRGFQTKMDVIGNNIANVNTVG-------FKASRVMF 41


>gi|256830177|ref|YP_003158905.1| flagellar basal-body rod protein FlgF [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579353|gb|ACU90489.1| flagellar basal-body rod protein FlgF [Desulfomicrobium baculatum
           DSM 4028]
          Length = 258

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 23/83 (27%)

Query: 54  VMHGSGGVRVKKIGVDQSTFVEEFDPGH------------PVAN-----------ASGIV 90
           ++   GG  V    +D    V   DP              P A+             G +
Sbjct: 153 LVDADGGFSVNGELIDTIELVRVEDPRALEKVGNSLLRIRPGADAQAIPAEDSTVEQGFL 212

Query: 91  KYPNVNVLVETADMRETNRLYMA 113
           +  NVNV+ E  +M E  R + A
Sbjct: 213 EAANVNVVSEMVNMIEAMRAFEA 235



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYR 45
           L  Q  R+  I+ N+AN  TTG       +R
Sbjct: 12 ALT-QQHRLDSIANNLANVNTTGFKSEKLAFR 42


>gi|226950067|ref|YP_002805158.1| flagellar hook protein FlgE [Clostridium botulinum A2 str. Kyoto]
 gi|226841875|gb|ACO84541.1| flagellar hook protein FlgE [Clostridium botulinum A2 str. Kyoto]
          Length = 334

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  E  +M   NR + A  + I    +++   ++L R
Sbjct: 288 NGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVNLKR 334



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL  Q  R+ I+  NIANA TT        ++ ++I F++++  +
Sbjct: 1  MLRSMYSGISGLKAQQTRLDIVGNNIANANTTA-------FKSQSIRFQDMLSQN 48


>gi|153837083|ref|ZP_01989750.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ3810]
 gi|149749671|gb|EDM60416.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ3810]
          Length = 457

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 32/90 (35%), Gaps = 16/90 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GV 61
          +IA SGL      + + ++N+AN  T G       Y R+      V  G         GV
Sbjct: 5  NIALSGLNANRVALDVTAQNVANVNTPG-------YSRQQALMATVGDGKSNRLSSGMGV 57

Query: 62 RVKKIGVDQSTF--VEEFDPGHPVANASGI 89
           V  I      F   + +      A A+G 
Sbjct: 58 EVTSIRRVTDQFLVKQTWSTNSLAAYAAGY 87


>gi|28900128|ref|NP_799783.1| putative flagellar hook-associated protein [Vibrio
          parahaemolyticus RIMD 2210633]
 gi|260365778|ref|ZP_05778274.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          K5030]
 gi|260880700|ref|ZP_05893055.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AN-5034]
 gi|260897694|ref|ZP_05906190.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          Peru-466]
 gi|28808411|dbj|BAC61616.1| putative flagellar hook-associated protein [Vibrio
          parahaemolyticus RIMD 2210633]
 gi|308086274|gb|EFO35969.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          Peru-466]
 gi|308092694|gb|EFO42389.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AN-5034]
 gi|308114946|gb|EFO52486.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          K5030]
          Length = 457

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 32/90 (35%), Gaps = 16/90 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GV 61
          +IA SGL      + + ++N+AN  T G       Y R+      V  G         GV
Sbjct: 5  NIALSGLNANRVALDVTAQNVANVNTPG-------YSRQQALMATVGDGKSNRLSSGMGV 57

Query: 62 RVKKIGVDQSTF--VEEFDPGHPVANASGI 89
           V  I      F   + +      A A+G 
Sbjct: 58 EVTSIRRVTDQFLVKQTWSTNSLAAYAAGY 87


>gi|312111671|ref|YP_003989987.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
 gi|311216772|gb|ADP75376.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
          Length = 268

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R + AN + I  S +++   ++L
Sbjct: 222 SGALEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVNL 266


>gi|170021358|ref|YP_001726312.1| flagellar basal body rod protein FlgG [Escherichia coli ATCC 8739]
 gi|188494741|ref|ZP_03002011.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|307136860|ref|ZP_07496216.1| flagellar basal body rod protein FlgG [Escherichia coli H736]
 gi|331640715|ref|ZP_08341862.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331671806|ref|ZP_08372602.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
 gi|169756286|gb|ACA78985.1| flagellar basal-body rod protein FlgG [Escherichia coli ATCC 8739]
 gi|188489940|gb|EDU65043.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|315616825|gb|EFU97442.1| flagellar basal-body rod protein FlgG [Escherichia coli 3431]
 gi|323181549|gb|EFZ66969.1| flagellar basal-body rod protein FlgG [Escherichia coli 1357]
 gi|331040089|gb|EGI12297.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331070795|gb|EGI42154.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
          Length = 261

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 17/36 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV+++ E   M    R Y  N + +  + DM+ 
Sbjct: 220 EGSNVDIVNEMVAMITVQRAYEMNAKMVSAADDMLQ 255



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ + + 
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFYQTQ 49


>gi|313497764|gb|ADR59130.1| FlgG [Pseudomonas putida BIRD-1]
          Length = 261

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NV+ + E  +M  T R Y  N + I  +  M++
Sbjct: 222 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F ++++ 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFADLLYQ 47


>gi|312115280|ref|YP_004012876.1| flagellar hook-basal body protein [Rhodomicrobium vannielii ATCC
          17100]
 gi|311220409|gb|ADP71777.1| flagellar hook-basal body protein [Rhodomicrobium vannielii ATCC
          17100]
          Length = 413

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          L    + + SG+A QS  +  +++NIAN  TTG       Y+R +  F  ++  SG
Sbjct: 3  LYGLLNTSASGMAAQSTALSTVADNIANVSTTG-------YKRASTEFSTLVASSG 51


>gi|326319501|ref|YP_004237173.1| flagellar basal body rod protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323376337|gb|ADX48606.1| flagellar basal body rod protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 100

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 41/117 (35%), Gaps = 30/117 (25%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           GL     ++   + N+AN  T G       +RR+T+    V    GGV  +         
Sbjct: 11  GLRAAQLQLDTSAHNVANMNTEG-------FRRQTVEQSAVPD-QGGVEARV-------G 55

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               +   P A+A                D       + ANLQT+K    M+ + LD
Sbjct: 56  RAAQEGASPEADA---------------VDQMSATYAFSANLQTLKTEDRMLGSLLD 97


>gi|111115108|ref|YP_709726.1| flagellar hook protein FlgE [Borrelia afzelii PKo]
 gi|216263795|ref|ZP_03435789.1| flagellar hook protein FlgE [Borrelia afzelii ACA-1]
 gi|110890382|gb|ABH01550.1| flagellar hook protein [Borrelia afzelii PKo]
 gi|215979839|gb|EEC20661.1| flagellar hook protein FlgE [Borrelia afzelii ACA-1]
          Length = 442

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 38.0 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|148546709|ref|YP_001266811.1| flagellar basal body rod protein FlgG [Pseudomonas putida F1]
 gi|148510767|gb|ABQ77627.1| flagellar basal-body rod protein FlgG [Pseudomonas putida F1]
          Length = 261

 Score = 50.3 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NV+ + E  +M  T R Y  N + I  +  M++
Sbjct: 222 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFQDLLYQ 47


>gi|325274797|ref|ZP_08140825.1| flagellar basal body rod protein FlgG [Pseudomonas sp. TJI-51]
 gi|324100065|gb|EGB97883.1| flagellar basal body rod protein FlgG [Pseudomonas sp. TJI-51]
          Length = 261

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NV+ + E  +M  T R Y  N + I  +  M++
Sbjct: 222 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F ++++ 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFADLLYQ 47


>gi|288960286|ref|YP_003450626.1| flagellar hook protein [Azospirillum sp. B510]
 gi|288912594|dbj|BAI74082.1| flagellar hook protein [Azospirillum sp. B510]
          Length = 871

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NV++  E   M  T R Y AN + +  S +M+   L L R
Sbjct: 828 VESSNVDIADEFTKMIVTQRSYSANAKIVTTSDEMLQEVLGLKR 871



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 16/114 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
           +  S   A  GL  QS  +  IS+NIAN+ T G       Y+R   +FE +       +H
Sbjct: 3   IFGSMTTAVLGLNAQSKALGHISDNIANSSTIG-------YKRVDSAFETMVLQSSQRLH 55

Query: 57  GSGGVRVKKIGVD--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
             GGV  + + ++  Q +  +   P +      G      VNV   T+ + +T 
Sbjct: 56  EPGGVTAQPVFMNSIQGSLTQVQSPTNIAIQGQGFFSVSKVNVQNSTSTLVQTQ 109


>gi|260899395|ref|ZP_05907790.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ4037]
 gi|308109296|gb|EFO46836.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ4037]
          Length = 457

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 32/90 (35%), Gaps = 16/90 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GV 61
          +IA SGL      + + ++N+AN  T G       Y R+      V  G         GV
Sbjct: 5  NIALSGLNANRVALDVTAQNVANVNTPG-------YSRQQALMATVGDGKSNRLSSGMGV 57

Query: 62 RVKKIGVDQSTF--VEEFDPGHPVANASGI 89
           V  I      F   + +      A A+G 
Sbjct: 58 EVTSIRRVTDQFLVKQTWSTNSLAAYAAGY 87


>gi|188587424|ref|YP_001918969.1| protein of unknown function DUF1078 domain protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179352111|gb|ACB86381.1| protein of unknown function DUF1078 domain protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 280

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NVN + E   M    R Y +N + I+   D +   + D+ R
Sbjct: 230 QGKIESSNVNSVDEMTGMINALRAYESNQRAIQGHDDTLERAVNDIGR 277


>gi|167034941|ref|YP_001670172.1| flagellar basal body rod protein FlgG [Pseudomonas putida GB-1]
 gi|166861429|gb|ABY99836.1| flagellar basal-body rod protein FlgG [Pseudomonas putida GB-1]
          Length = 261

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NV+ + E  +M  T R Y  N + I  +  M++
Sbjct: 222 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLS 255



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F ++++ 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFADLLYQ 47


>gi|15895423|ref|NP_348772.1| flagellar hook protein FlgE [Clostridium acetobutylicum ATCC 824]
 gi|15025147|gb|AAK80112.1|AE007716_1 Flagellar hook protein FlgE [Clostridium acetobutylicum ATCC 824]
 gi|325509569|gb|ADZ21205.1| Flagellar hook protein FlgE [Clostridium acetobutylicum EA 2018]
          Length = 423

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  + +DM   +R Y AN + I  S +++   ++L R
Sbjct: 377 SGALEMSNVDLAQQFSDMIVASRAYQANGKIITTSDEILQDLVNLKR 423



 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          ++ +     SGL V   ++ I+  NIAN+ TT        Y+ ++I+F + 
Sbjct: 1  MLRAMTSGISGLKVNQNKLDIVGSNIANSSTTA-------YKSQSINFSDA 44


>gi|42522133|ref|NP_967513.1| flagellar biosynthesisprotein [Bdellovibrio bacteriovorus HD100]
 gi|39574664|emb|CAE78506.1| Flagellar biosynthesisprotein [Bdellovibrio bacteriovorus HD100]
          Length = 271

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN++ E  DM  TNR++ +  + I     M    ++
Sbjct: 221 KQGFLETSNVNIVQEMTDMISTNRVFESTQKAISAYDQMADKMIN 265



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 8/69 (11%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVD 69
          A SG   QS ++  I+ N+AN  T         ++R    F+E +  +  +    +I  D
Sbjct: 9  ALSGAMAQSTKLDTIANNLANVNTPA-------FKRDQQLFQEYLTANEKMPETTQIPRD 61

Query: 70 QSTFVEEFD 78
           +     ++
Sbjct: 62 VAAIESFYN 70


>gi|296447438|ref|ZP_06889363.1| flagellar basal-body rod protein FlgG [Methylosinus trichosporium
           OB3b]
 gi|296255058|gb|EFH02160.1| flagellar basal-body rod protein FlgG [Methylosinus trichosporium
           OB3b]
          Length = 262

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 36/103 (34%), Gaps = 23/103 (22%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-TFVEEFDPGHP 82
            I+ N AN  +  +  G + +R          + + G  V  +  D     + ++     
Sbjct: 174 TIA-NFAN-ESGLEALGGNLFR---------QNQASGTPVVGVPGDPGYGVISQY----- 217

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                  ++  NV+ + E  ++    R +  N + I    +M 
Sbjct: 218 ------YLESSNVDSVKELVNLIAAQRAFELNSKVISAVDEMA 254



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++IS NIAN  TT        ++R    F ++++ +
Sbjct: 1  MRALAIAATGMNAQQQNIEVISNNIANINTTA-------FKRSRAEFTDLLYQA 47


>gi|288553056|ref|YP_003424991.1| flagellar basal body rod protein FlgG [Bacillus pseudofirmus OF4]
 gi|288544216|gb|ADC48099.1| flagellar basal body rod protein FlgG [Bacillus pseudofirmus OF4]
          Length = 279

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 67  GVDQSTFVEEFDPGH--PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
             D S   +   P +    A  +G ++  NV++  E  +M    R + AN + I  S ++
Sbjct: 211 VTDNSGAAQRTTPTNDGTGALVAGTLEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEI 270

Query: 125 MTTTLDLLR 133
           +   ++L R
Sbjct: 271 LQELVNLKR 279


>gi|253702433|ref|YP_003023622.1| flagellar basal-body rod protein FlgF [Geobacter sp. M21]
 gi|251777283|gb|ACT19864.1| flagellar basal-body rod protein FlgF [Geobacter sp. M21]
          Length = 237

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  NV V+VE A M E +R +    + +K   DM    + +L R
Sbjct: 188 KQGYLESSNVKVVVEMARMIEASRYFETCTKAVKSYDDMTAKAVNELGR 236



 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 9/46 (19%)

Query: 11 ANSG-LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          A SG L+ Q  R+ +IS N+AN+ T G       ++   I FE V+
Sbjct: 8  ALSGNLSAQR-RLDVISNNLANSNTAG-------FKADQIQFESVL 45


>gi|317152080|ref|YP_004120128.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942331|gb|ADU61382.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 535

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E A M  T R Y AN + I  S  ++ T + + R
Sbjct: 493 EMSNVDMAEEFASMIITQRGYQANTKVITTSDSLLNTLISVKR 535



 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 19/32 (59%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
           +S ++  +G+     RMQ+++ N+AN  T G
Sbjct: 3  FSSLYVGATGVVAHGERMQVVANNLANVSTIG 34


>gi|227820875|ref|YP_002824845.1| flagellar hook protein FlgE [Sinorhizobium fredii NGR234]
 gi|227339874|gb|ACP24092.1| putative flagellar hook protein FlgE [Sinorhizobium fredii
          NGR234]
          Length = 404

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 14/68 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          L  +     SG+  Q+ R+  ++ENIAN+ TTG       Y+R +  F  ++       +
Sbjct: 3  LYGTMRTGVSGMNAQANRLSTVAENIANSSTTG-------YKRASTEFSSMILPSSNGSY 55

Query: 57 GSGGVRVK 64
           SGGV   
Sbjct: 56 NSGGVETS 63



 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E   M E+ R Y AN +  +   +++   ++L R
Sbjct: 358 SGALESSNVDIADELTSMIESQRNYTANSKVFQTGSELLEVLVNLKR 404


>gi|300870897|ref|YP_003785768.1| flagellar hook-basal body complex protein FlhO [Brachyspira
           pilosicoli 95/1000]
 gi|300688596|gb|ADK31267.1| flagellar hook-basal body complex protein, FlhO [Brachyspira
           pilosicoli 95/1000]
          Length = 282

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            ++  NVN + E   M E  R Y  N +TI     ++   + ++ R
Sbjct: 236 FLEMSNVNPINEMVRMIEVQRAYELNSKTISTHDTLIGRVVNEVGR 281



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 7/42 (16%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
           SG+  +  R+ +++ N+AN       PG   ++R T +F+ 
Sbjct: 9  ASGMIAEQYRLDVVANNLANVD----KPG---FKRDTATFKA 43


>gi|220922287|ref|YP_002497589.1| flagellar basal body FlaE domain-containing protein
          [Methylobacterium nodulans ORS 2060]
 gi|219946894|gb|ACL57286.1| flagellar basal body FlaE domain protein [Methylobacterium
          nodulans ORS 2060]
          Length = 456

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 8/51 (15%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          MD + ++   A SGL  Q+  +  IS NIANA+TTG       YRR   +F
Sbjct: 1  MD-VFSALQTAVSGLKAQAFSLDNISGNIANAQTTG-------YRRIDTTF 43



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G V+  N +   E + +  T + Y AN + +  +  MMT  ++++R
Sbjct: 411 GNVEQSNTDTANEFSKLIITQQAYSANTRVMSTAQQMMTDLINIIR 456


>gi|253688972|ref|YP_003018162.1| hypothetical protein PC1_2595 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755550|gb|ACT13626.1| protein of unknown function DUF1078 domain protein [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 405

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 364 EMSNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQTLVSL 404



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S  + +I  NIAN+ T G       ++  T++F ++  GS    GV+V  + 
Sbjct: 6  AVSGLNAASNNLDVIGNNIANSATVG-------FKSGTVTFADMFAGSKVGMGVKVASVL 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|224534234|ref|ZP_03674812.1| flagellar hook protein FlgE [Borrelia spielmanii A14S]
 gi|224514336|gb|EEF84652.1| flagellar hook protein FlgE [Borrelia spielmanii A14S]
          Length = 442

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 37.6 bits (87), Expect = 0.51,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|168180921|ref|ZP_02615585.1| flagellar hook protein FlgE [Clostridium botulinum NCTC 2916]
 gi|182668204|gb|EDT80183.1| flagellar hook protein FlgE [Clostridium botulinum NCTC 2916]
 gi|322806984|emb|CBZ04554.1| flagellar hook protein FlgE [Clostridium botulinum H04402 065]
          Length = 334

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  E  +M   NR + A  + I    +++   ++L R
Sbjct: 288 NGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVNLKR 334



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL  Q  R+ I+  NIANA TT        ++ ++I F++++  +
Sbjct: 1  MLRSMYSGISGLKAQQTRLDIVGNNIANANTTA-------FKSQSIRFQDMLSQN 48


>gi|224532235|ref|ZP_03672867.1| flagellar hook protein FlgE [Borrelia valaisiana VS116]
 gi|224511700|gb|EEF82106.1| flagellar hook protein FlgE [Borrelia valaisiana VS116]
          Length = 442

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 37.6 bits (87), Expect = 0.51,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|332296626|ref|YP_004438549.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
 gi|332179729|gb|AEE15418.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
          Length = 255

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 26/126 (20%)

Query: 28  NIANARTTGDT-------PGSDPYRRKTISF---EEVMHGSGGV-----RVKKIGVDQST 72
           NI N  TT          P    Y     +F   + V+ G   V     +   I V  + 
Sbjct: 134 NI-NIDTTSKNFVNFTVKPDGSVYS----NFSNGQSVLDGKIMVVDFINKNALINVGGNN 188

Query: 73  FVEEFDPGHPVANASGI------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           F    + G+PVA ++G       ++  N ++  + A++ +  R Y  N Q I  S  M+ 
Sbjct: 189 FSPSVNSGNPVALSNGYSIIQNALEGSNTDLATQMANLIDYERTYQVNAQAITTSDSMLQ 248

Query: 127 TTLDLL 132
           T + L+
Sbjct: 249 TAIGLI 254



 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 12/59 (20%)

Query: 1  MDYLIASAHIANSG-LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          MD    S   A SG L+ QSA + +++ NI+N  TTG       ++    +F +V+   
Sbjct: 1  MD---NSIFTAVSGALSSQSA-LDVVANNISNVNTTG-------FKESNPTFADVLSQE 48


>gi|283850852|ref|ZP_06368138.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
 gi|283573775|gb|EFC21749.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
          Length = 551

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV++  E   M  T R + AN +TI     M++  + L R
Sbjct: 511 SNVDMATEMVSMILTQRGFEANSKTITTVDSMLSEVIQLKR 551



 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 13/24 (54%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          SGL   S +M  I  N+AN  T G
Sbjct: 14 SGLLANSTKMSTIGNNLANVNTVG 37


>gi|28211309|ref|NP_782253.1| flagellar basal body rod protein FlgG [Clostridium tetani E88]
 gi|28203749|gb|AAO36190.1| flagellar basal-body rod protein flgG [Clostridium tetani E88]
          Length = 285

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 7/44 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          S +  Q  ++  IS NIAN  T G       Y+R+ +SF+++M+
Sbjct: 10 SAMYAQQEKLDAISNNIANVNTEG-------YKRQDVSFQDLMN 46



 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 73  FVEEFDPGHPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            V+  +P    ++   G V+  NV +  E +DM  + R +  + + +K + +M
Sbjct: 223 PVQGVNPEAVNSDVLQGYVERSNVRMEKEMSDMIVSQRAFEFSSRAVKAADEM 275


>gi|301645415|ref|ZP_07245356.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
 gi|301076299|gb|EFK91105.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
          Length = 261

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 17/36 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV+++ E   M    R Y  N + +  + DM+ 
Sbjct: 220 EGSNVDIVNEMVAMITVQRAYEMNAKMVSAADDMLQ 255



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++R  + F+++ + + 
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTG-------FKRDRVMFQDLFYQTQ 49


>gi|24216188|ref|NP_713669.1| FlgC-like protein [Leptospira interrogans serovar Lai str. 56601]
 gi|24197440|gb|AAN50687.1| FlgC-related protein [Leptospira interrogans serovar Lai str.
           56601]
          Length = 276

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 26/117 (22%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L +Q AR++    N+ N  T         Y+++TI  +    GS       +  + S   
Sbjct: 142 LTIQIARIEQCYTNLINVNTIS-------YKKRTIQLQ--DDGS------FLISENSNQR 186

Query: 75  EEFDPGHPVA----NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
             F+P HP A    +A G + YP++NV  E  +++        N+        ++  
Sbjct: 187 YLFEPTHPDAIRTGSAKGYITYPDINVAEELYNLKS-------NISLYNSLTSLINK 236


>gi|269965650|ref|ZP_06179763.1| putative flagellar hook-associated protein [Vibrio alginolyticus
          40B]
 gi|269829718|gb|EEZ83954.1| putative flagellar hook-associated protein [Vibrio alginolyticus
          40B]
          Length = 107

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 32/90 (35%), Gaps = 16/90 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GV 61
          +IA SGL      + + ++N+AN  T G       Y R+      V  G         GV
Sbjct: 5  NIALSGLGANRVALDVTAQNVANVNTVG-------YSRQQALMASVDDGKANRLSPGLGV 57

Query: 62 RVKKIGVDQSTF--VEEFDPGHPVANASGI 89
           V  I      F   + +      A ASG 
Sbjct: 58 EVTSIRRVTDQFLIKQTWSTNSMAAYASGY 87


>gi|296282277|ref|ZP_06860275.1| flagellar basal body rod protein FlgG [Citromicrobium
          bathyomarinum JL354]
          Length = 262

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 7/57 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           ++  +A +GL  Q ARM++I+ N+AN  TTG       ++R   +F  + +    V
Sbjct: 3  TSALQVARTGLEAQDARMRVIANNLANVGTTG-------FKRDRANFATLAYQDARV 52



 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G+++  NVN++ E   M E  R Y  + + +    +M+   
Sbjct: 217 QGMLEGSNVNIVEELVAMIEAQRAYEISSKMVSAVDEMLRNA 258


>gi|300024616|ref|YP_003757227.1| flagellar basal-body rod protein FlgF [Hyphomicrobium
          denitrificans ATCC 51888]
 gi|299526437|gb|ADJ24906.1| flagellar basal-body rod protein FlgF [Hyphomicrobium
          denitrificans ATCC 51888]
          Length = 240

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 10/56 (17%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          GL+ Q     R+  ++ N+ANA T G       YR + +SFEEV+  SG   V  +
Sbjct: 8  GLSAQLALQRRLDTVANNVANAGTAG-------YRAEQMSFEEVLSKSGQTAVSFV 56



 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            G V+  NVN ++E   +    R + A    ++++   +  +L
Sbjct: 192 QGYVEKSNVNPILEMTHLTTLQRSFDAVSNVLRETESSLQDSL 234


>gi|254462012|ref|ZP_05075428.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
          HTCC2083]
 gi|206678601|gb|EDZ43088.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
          HTCC2083]
          Length = 261

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 22/32 (68%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
          + +  IA +G++ Q  R+++IS N+AN  TTG
Sbjct: 1  MRALKIAATGMSAQQMRVEVISNNLANMSTTG 32



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  +V+ + E  ++ E  R Y  N + I  +  M+     +
Sbjct: 216 QGYLEDSSVDAVREVTELIEAQRGYELNAKVITAADQMLGAATQI 260


>gi|153940778|ref|YP_001392018.1| flagellar hook-associated protein FlgK [Clostridium botulinum F
          str. Langeland]
 gi|152936674|gb|ABS42172.1| flagellar hook-associated protein FlgK [Clostridium botulinum F
          str. Langeland]
 gi|295320033|gb|ADG00411.1| flagellar hook-associated protein FlgK [Clostridium botulinum F
          str. 230613]
          Length = 621

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L  + +I  SG+  Q   +   S NIANA T G       Y R+ +  +  
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANASTEG-------YSRQRVELQTT 47


>gi|149911700|ref|ZP_01900308.1| Flagellar basal body rod protein FlgG [Moritella sp. PE36]
 gi|149805230|gb|EDM65247.1| Flagellar basal body rod protein FlgG [Moritella sp. PE36]
          Length = 262

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV  E  ++ E+ R+Y  N + I    +M++
Sbjct: 217 QGAIETSNVNVTEELVNLIESQRVYEMNSKVISAVDEMLS 256



 Score = 41.5 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 10/58 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    +  I+ +GL  Q A +  IS N+ANA T G       ++++   FE++++ +
Sbjct: 1  MNP---ALWISKTGLEAQQANISTISNNLANASTVG-------FKKERAIFEDLLYQA 48


>gi|16125152|ref|NP_419716.1| flagellar hook-associated protein FlaN [Caulobacter crescentus
          CB15]
 gi|221233880|ref|YP_002516316.1| flagellar hook-associated protein FlaN [Caulobacter crescentus
          NA1000]
 gi|13422164|gb|AAK22884.1| flagellar hook-associated protein FlaN, putative [Caulobacter
          crescentus CB15]
 gi|220963052|gb|ACL94408.1| flagellar hook-associated protein FlaN [Caulobacter crescentus
          NA1000]
          Length = 703

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 7/60 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L A    A SG+      +++ S+NIAN  TTG       Y RKT+S   ++    GV V
Sbjct: 3  LNAIMSTATSGMMAAQTGLRVTSDNIANVNTTG-------YVRKTVSQSNLLSNGMGVGV 55


>gi|296186751|ref|ZP_06855153.1| flagellar hook-associated protein FlgK [Clostridium
          carboxidivorans P7]
 gi|296048788|gb|EFG88220.1| flagellar hook-associated protein FlgK [Clostridium
          carboxidivorans P7]
          Length = 463

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 21/82 (25%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
          M  L  + +I+ SG+  Q   + + S NIANA T G       Y R+    +        
Sbjct: 1  MSGLFGTLNISKSGMFAQQRCIDVTSHNIANANTDG-------YSRQRAELQTTKPFPMP 53

Query: 54 -VMHGSG------GVRVKKIGV 68
           V +  G      GV V  I  
Sbjct: 54 SVNNAVGPGQLGTGVEVTTIDR 75


>gi|296157456|ref|ZP_06840291.1| fagellar hook-basal body protein [Burkholderia sp. Ch1-1]
 gi|295892228|gb|EFG72011.1| fagellar hook-basal body protein [Burkholderia sp. Ch1-1]
          Length = 503

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G V+  NV++  E  D+    R Y AN QTIK    +  T ++L
Sbjct: 460 GAVENSNVDLTSELVDLITAQRNYQANAQTIKTQQTVDQTLINL 503


>gi|254470407|ref|ZP_05083811.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
 gi|211960718|gb|EEA95914.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
          Length = 260

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 7/55 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + + HIA +G+  Q   +++IS N+AN RTTG       Y+R+   F+++++ + 
Sbjct: 1  MKALHIAATGMKAQELNVEVISNNVANMRTTG-------YKRQRADFQDLLYENQ 48



 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV+ + E + +    R Y  N + IK + +M +TT +L
Sbjct: 221 SNVDAVTELSSLISAQRAYEMNSKIIKAADEMYSTTTNL 259


>gi|300311353|ref|YP_003775445.1| flagellar basal body rod protein FlgF [Herbaspirillum seropedicae
           SmR1]
 gi|300074138|gb|ADJ63537.1| flagellar basal body rod FlgF protein [Herbaspirillum seropedicae
           SmR1]
          Length = 245

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 82  PVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           P AN   ASG ++  NVNV+    +M   +R +  N++ I+ +    T    +L
Sbjct: 189 PDANVRLASGALEGSNVNVVEAMVNMINLSRQFEMNMKMIQTAESDATKATSIL 242


>gi|295400717|ref|ZP_06810694.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312112591|ref|YP_003990907.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
 gi|294977298|gb|EFG52899.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217692|gb|ADP76296.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
          Length = 274

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
             G V+  NV++     +M    R + AN + ++     M     ++ R
Sbjct: 224 KQGFVERSNVDLNRAMTEMLSAYRAFEANQKIVQAYDKSMEKAVNEIGR 272



 Score = 42.2 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A SG+  Q  R+++++ NIANA T G        R 
Sbjct: 1  MLRGFYTAASGMMAQQRRVEMLTNNIANANTPGYKADQAALRA 43


>gi|317154735|ref|YP_004122783.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944986|gb|ADU64037.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 554

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M  T R + AN + I  +  M+   + + R
Sbjct: 512 ELSNVDMATEFVRMITTQRGFQANTKVITTTDSMLGEVIAMKR 554



 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 18/68 (26%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------HGSG----GV 61
          +GL V S RM +I  N+AN  T G       ++   + FE+++       +G G    GV
Sbjct: 12 TGLTVHSERMTVIGNNLANVNTVG-------FKGTWMQFEDLLSQDFATVNGVGQIGRGV 64

Query: 62 RVKKIGVD 69
          RV  I  D
Sbjct: 65 RVSTIYSD 72


>gi|262404540|ref|ZP_06081095.1| flagellar hook protein FlgE [Vibrio sp. RC586]
 gi|262349572|gb|EEY98710.1| flagellar hook protein FlgE [Vibrio sp. RC586]
          Length = 434

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++G ++  N+++  E  D+    R + AN + ++  + +    L +
Sbjct: 388 SNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNILQI 433



 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 10 IANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSG-GVRVK 64
          I+ SGL+     +   S NIANA T           D Y   T  F       G GV+  
Sbjct: 4  ISLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVY--STSLFTNAKTTPGQGVQAA 61

Query: 65 KIGVDQSTFVEEFDPGHPV 83
          K+          +   +P+
Sbjct: 62 KVAQQFHEGSSIY-TNNPL 79


>gi|83814503|ref|YP_446705.1| flagellar biosynthesis cell-distal portion of basal-body rod
          [Salinibacter ruber DSM 13855]
 gi|294508641|ref|YP_003572700.1| flagellar hook protein FlgE [Salinibacter ruber M8]
 gi|83755897|gb|ABC44010.1| flagellar biosynthesis cell-distal portion of basal-body rod
          [Salinibacter ruber DSM 13855]
 gi|294344970|emb|CBH25748.1| Flagellar hook protein FlgE [Salinibacter ruber M8]
          Length = 432

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + S  I  SGL     R+  +S NIAN+ TT        ++R+  +F E +  +
Sbjct: 3  LQSLSIGVSGLRSHQTRLDTVSNNIANSSTTA-------FKRQRAAFSEELGQA 49



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E +D+ +  R Y A+ Q I  + +++  T+ L R
Sbjct: 386 SGALESSNVDLAKEFSDLIKAQRSYQASSQIITTADEVLNQTVQLKR 432


>gi|237796094|ref|YP_002863646.1| flagellar hook protein FlgE [Clostridium botulinum Ba4 str. 657]
 gi|229263494|gb|ACQ54527.1| flagellar hook protein FlgE [Clostridium botulinum Ba4 str. 657]
          Length = 332

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  E  +M   NR + A  + I    +++   ++L R
Sbjct: 286 NGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVNLKR 332



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL  Q  ++ ++  NIANA TT        ++ ++I F++++  +
Sbjct: 1  MLRSMYSGISGLKAQQTKLDVVGNNIANANTTA-------FKSQSIRFQDMLSQN 48


>gi|326386932|ref|ZP_08208546.1| flagellar basal body rod protein FlgG [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208612|gb|EGD59415.1| flagellar basal body rod protein FlgG [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 262

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NV+V+ E  DM E  R Y  N + +    DM+   
Sbjct: 217 QGFLEASNVSVVSELVDMIECQRAYEINSKMVSAVDDMLKNA 258



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          ++ ++A +GL  Q  RM++I+ N+AN  TTG       ++R   +F  + +    V
Sbjct: 4  SALYVARTGLEAQDTRMRVIANNLANVSTTG-------FKRDRANFASLAYQDARV 52


>gi|319409169|emb|CBI82813.1| Flagellar hook protein FlgE [Bartonella schoenbuchensis R1]
          Length = 403

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV +  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 357 SGYLEDSNVEMSDELTDMIEAQRNYTANSKVFQTGSELMDVIVNLKR 403



 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 7/52 (13%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
               SG+  Q  R+  ++EN+AN  T G       Y+R  + F   +  SG
Sbjct: 7  MRTGVSGMNAQGTRLSGVAENVANVNTIG-------YKRTDVQFSNYVIPSG 51


>gi|45656594|ref|YP_000680.1| hypothetical protein LIC10696 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599829|gb|AAS69317.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 276

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 26/104 (25%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA--- 84
           N+ N  T         Y+++TI  +    GS       +  + S     F+P HP A   
Sbjct: 155 NLINVNTIS-------YKKRTIQLQ--DDGS------FLISENSNQRYLFEPTHPDAIRT 199

Query: 85  -NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            +A G + YP++NV  E  +++        N+        ++  
Sbjct: 200 GSAKGYITYPDINVAEELYNLKS-------NISLYNSLTSLINK 236


>gi|157961173|ref|YP_001501207.1| flagellar basal body rod protein FlgG [Shewanella pealeana ATCC
           700345]
 gi|157846173|gb|ABV86672.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC
           700345]
          Length = 262

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M++
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQMLS 256



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + +IS N+ANA T G       +++    FE++++ +
Sbjct: 7  ISKTGLDAQQTDISVISNNVANASTVG-------FKKSRAVFEDLLYQN 48


>gi|203287743|ref|YP_002222758.1| flagellar hook protein [Borrelia recurrentis A1]
 gi|201084963|gb|ACH94537.1| flagellar hook protein [Borrelia recurrentis A1]
          Length = 441

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 395 SGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 439



 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 18/75 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          ++ S +   SGL     RM ++  NI+N  T G       +++  ++F++++        
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNISNVNTVG-------FKKGRVNFQDMISQSISGAS 53

Query: 56 ---HGSGGVRVKKIG 67
              G GGV  K+IG
Sbjct: 54 RPTDGRGGVNPKQIG 68


>gi|168182737|ref|ZP_02617401.1| flagellar hook protein FlgE [Clostridium botulinum Bf]
 gi|182674150|gb|EDT86111.1| flagellar hook protein FlgE [Clostridium botulinum Bf]
          Length = 332

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  E  +M   NR + A  + I    +++   ++L R
Sbjct: 286 NGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVNLKR 332



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL  Q  ++ ++  NIANA TT        ++ ++I F++++  +
Sbjct: 1  MLRSMYSGISGLKAQQTKLDVVGNNIANANTTA-------FKSQSIRFQDMLSQN 48


>gi|168180854|ref|ZP_02615518.1| flagellar hook-associated protein FlgK [Clostridium botulinum
          NCTC 2916]
 gi|182668369|gb|EDT80348.1| flagellar hook-associated protein FlgK [Clostridium botulinum
          NCTC 2916]
          Length = 621

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L  + +I  SG+  Q   +   S NIANA T G       Y R+ +  +  
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANASTEG-------YSRQRVELQTT 47


>gi|119953082|ref|YP_945291.1| flagellar hook protein FlgE [Borrelia turicatae 91E135]
 gi|119861853|gb|AAX17621.1| flagellar hook protein FlgE [Borrelia turicatae 91E135]
          Length = 442

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 AGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 18/79 (22%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++        
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQSISGAS 53

Query: 56 ---HGSGGVRVKKIGVDQS 71
              G GGV  K++G+  S
Sbjct: 54 RPTDGRGGVNPKQVGLGMS 72


>gi|170756722|ref|YP_001782271.1| flagellar hook protein flgE [Clostridium botulinum B1 str. Okra]
 gi|169121934|gb|ACA45770.1| flagellar hook protein flgE [Clostridium botulinum B1 str. Okra]
          Length = 344

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  E  +M   NR + A  + I    +++   ++L R
Sbjct: 298 NGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVNLKR 344



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL  Q  ++ I+  NIANA TT        ++ ++I F++++  +
Sbjct: 1  MLRSMYSGISGLKAQQTKLDIVGNNIANANTTA-------FKSQSIRFQDMLSQN 48


>gi|167630298|ref|YP_001680797.1| flagellar hook protein [Heliobacterium modesticaldum Ice1]
 gi|167593038|gb|ABZ84786.1| flagellar hook protein [Heliobacterium modesticaldum Ice1]
          Length = 442

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  DM  T R + AN + I  S  M+   ++L R
Sbjct: 397 GALEMSNVDLSQEFTDMITTQRGFQANSRIISVSDSMLEELVNLKR 442



 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L +      + L     RM  I  NIAN  T G       +++  ++F + ++ +
Sbjct: 2  MRSLFSGV----TALRNHQTRMDTIGNNIANVNTIG-------FKKSRVTFADALNQT 48


>gi|89098635|ref|ZP_01171517.1| flagellar hook protein [Bacillus sp. NRRL B-14911]
 gi|89086597|gb|EAR65716.1| flagellar hook protein [Bacillus sp. NRRL B-14911]
          Length = 270

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 224 SGSLEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVNLKR 270



 Score = 37.2 bits (86), Expect = 0.75,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 7/57 (12%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          D ++ S +   SG+     ++ +I  NIAN  T G       Y++  ++F++++  +
Sbjct: 5  DKMLRSMYSGISGMKNFQTKLDVIGNNIANVNTFG-------YKKGRVTFKDMVSQT 54


>gi|322432989|ref|YP_004210238.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9]
 gi|321165216|gb|ADW70920.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9]
          Length = 412

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G V+  NV+V  E A M    + Y AN +T+     +   TL ++
Sbjct: 366 GSVESSNVDVAAEFAKMIVAQQAYQANAKTVTTFDQISQATLQMI 410


>gi|170760196|ref|YP_001788056.1| flagellar hook-associated protein FlgK [Clostridium botulinum A3
          str. Loch Maree]
 gi|169407185|gb|ACA55596.1| flagellar hook-associated protein FlgK [Clostridium botulinum A3
          str. Loch Maree]
          Length = 621

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L  + +I  SG+  Q   +   S NIANA T G       Y R+ +  +  
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANASTEG-------YSRQRVELQTT 47


>gi|255523748|ref|ZP_05390714.1| flagellar hook-associated protein FlgK [Clostridium
          carboxidivorans P7]
 gi|255512617|gb|EET88891.1| flagellar hook-associated protein FlgK [Clostridium
          carboxidivorans P7]
          Length = 649

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 21/82 (25%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
          M  L  + +I+ SG+  Q   + + S NIANA T G       Y R+    +        
Sbjct: 1  MSGLFGTLNISKSGMFAQQRCIDVTSHNIANANTDG-------YSRQRAELQTTKPFPMP 53

Query: 54 -VMHGSG------GVRVKKIGV 68
           V +  G      GV V  I  
Sbjct: 54 SVNNAVGPGQLGTGVEVTTIDR 75


>gi|291613038|ref|YP_003523195.1| fagellar hook-basal body protein [Sideroxydans lithotrophicus ES-1]
 gi|291583150|gb|ADE10808.1| fagellar hook-basal body protein [Sideroxydans lithotrophicus ES-1]
          Length = 405

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R+Y AN QTIK    ++ T ++L
Sbjct: 363 VEDSNVDLTAELVNMITAQRVYQANAQTIKTQDQVLQTIVNL 404



 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 5/60 (8%)

Query: 13 SGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          SGL   S  + +I  N+ANA T G        +D Y   +++         G RV  +  
Sbjct: 8  SGLNAASKSLDVIGNNVANASTVGFKQSQAQFADVY-ASSMAGSSGGQAGIGTRVATVAQ 66


>gi|167623363|ref|YP_001673657.1| flagellar basal body rod protein FlgG [Shewanella halifaxensis
           HAW-EB4]
 gi|167353385|gb|ABZ75998.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis
           HAW-EB4]
          Length = 262

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M++
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQMLS 256



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + +IS N+ANA T G       +++    FE++++ +
Sbjct: 7  ISKTGLDAQQTDISVISNNVANASTVG-------FKKSRAVFEDLLYQN 48


>gi|114707045|ref|ZP_01439944.1| flagellar hook protein E [Fulvimarina pelagi HTCC2506]
 gi|114537595|gb|EAU40720.1| flagellar hook protein E [Fulvimarina pelagi HTCC2506]
          Length = 390

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
             + SG+  QS ++  +S+NIAN+ TTG       Y+R  + F  ++  SGG
Sbjct: 7  FRTSVSGMNAQSNKLSAVSDNIANSATTG-------YKRADVEFSSLVINSGG 52



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  DM  T R Y AN +T +   +M+   ++L R
Sbjct: 344 SGALEESNVDLASELTDMIVTQRSYAANSKTFQTGSEMLDLLVNLKR 390


>gi|160876201|ref|YP_001555517.1| flagellar basal body rod protein FlgG [Shewanella baltica OS195]
 gi|160861723|gb|ABX50257.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS195]
 gi|315268391|gb|ADT95244.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS678]
          Length = 262

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M++
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQMLS 256



 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 11/60 (18%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----HGSGGVRVKK 65
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE+++    + +GGV    
Sbjct: 7  ISKTGLDAQQTDIAVISNNVANASTVG-------YKKSRAVFEDLLYQTVNQAGGVSASN 59


>gi|148380612|ref|YP_001255153.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC
           3502]
 gi|153934204|ref|YP_001384898.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC
           19397]
 gi|153936013|ref|YP_001388367.1| flagellar hook protein flgE [Clostridium botulinum A str. Hall]
 gi|148290096|emb|CAL84215.1| flagellar hook protein [Clostridium botulinum A str. ATCC 3502]
 gi|152930248|gb|ABS35748.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC
           19397]
 gi|152931927|gb|ABS37426.1| flagellar hook protein flgE [Clostridium botulinum A str. Hall]
          Length = 345

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  E  +M   NR + A  + I    +++   ++L R
Sbjct: 299 NGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVNLKR 345



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL  Q  ++ I+  NIANA TT        ++ ++I F++++  +
Sbjct: 1  MLRSMYSGISGLKAQQTKLDIVGNNIANANTTA-------FKSQSIRFQDMLSQN 48


>gi|33601541|ref|NP_889101.1| flagellar hook protein FlgE [Bordetella bronchiseptica RB50]
 gi|33575977|emb|CAE33056.1| flagellar hook protein FlgE [Bordetella bronchiseptica RB50]
          Length = 473

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y AN QTI+  +++M   +++
Sbjct: 432 EGSNVDLSSELVNMIVAQRTYQANAQTIQTQNEVMQVLMNM 472



 Score = 40.7 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 10/59 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKI 66
          A SGL   S  + +I  NIAN+ T G   G+        SF +V   S    GV+V  I
Sbjct: 6  ALSGLNAASQNLDVIGNNIANSGTVGFKSGA-------ASFADVYASSRVGLGVKVSAI 57


>gi|297585402|ref|YP_003701182.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
 gi|297143859|gb|ADI00617.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
          Length = 276

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  NV++  E   M E  R Y  N   I  +  M
Sbjct: 235 EMSNVDMSREMTSMIEAQRAYQFNASAIGITDQM 268


>gi|220930463|ref|YP_002507372.1| hypothetical protein Ccel_3100 [Clostridium cellulolyticum H10]
 gi|220000791|gb|ACL77392.1| protein of unknown function DUF1078 domain protein [Clostridium
           cellulolyticum H10]
          Length = 270

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV V+ E   +    R Y  + + I+ S DM+    +L R
Sbjct: 223 KQGFLESSNVQVVDEMVKLIVAQRAYEVSSKAIQSSDDMLQIANNLRR 270



 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ + + A SG+  Q   + +IS N+AN  TTG       Y+++   F+++++ +
Sbjct: 1  MMRALYTAGSGMKAQQFNVDVISNNLANVNTTG-------YKKERAEFKDLLYQT 48


>gi|121607561|ref|YP_995368.1| flagellar basal body FlaE domain-containing protein
           [Verminephrobacter eiseniae EF01-2]
 gi|121552201|gb|ABM56350.1| flagellar basal body FlaE domain protein [Verminephrobacter
           eiseniae EF01-2]
          Length = 426

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QT+K    +M+T ++L
Sbjct: 387 SNVDLTAELVNMMTAQRTYQANAQTVKTQDQVMSTLVNL 425



 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHGSGGVRVKKI 66
          SGL   S  + +I  N+ANA T G   G   +     S     + ++   GV V  +
Sbjct: 8  SGLNAASKSLDVIGHNVANANTVGFKSGRAEFAEMVASAIGSADGLNAGIGVDVAAV 64


>gi|90422624|ref|YP_530994.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisB18]
 gi|90104638|gb|ABD86675.1| flagellar basal body FlaE [Rhodopseudomonas palustris BisB18]
          Length = 411

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          L        SG+  QS ++  +++NIAN  TTG       Y+R +  F  +
Sbjct: 3  LYGVMRTGGSGMTAQSNKLSAVADNIANVNTTG-------YKRASTEFSSL 46



 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M E+ R Y AN +  +   D++   ++L R
Sbjct: 369 EASNVDLANELTAMIESQRGYTANSKVFQTGADLLDVLVNLKR 411


>gi|315127351|ref|YP_004069354.1| flagellar basal body rod protein FlgG [Pseudoalteromonas sp.
           SM9913]
 gi|315015865|gb|ADT69203.1| flagellar basal body rod protein FlgG [Pseudoalteromonas sp.
           SM9913]
          Length = 262

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV  E  ++ ET R+Y  N + I    +MM+
Sbjct: 217 QGSLETSNVNVTEELVNLIETQRVYEMNSKVISAVDEMMS 256



 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 10/58 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    +  I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 1  MNP---ALWISKTGLDAQQTDISVISNNLANASTVG-------YKKSRAIFEDLLYQN 48


>gi|291334314|gb|ADD93975.1| hypothetical protein [uncultured marine bacterium
           MedDCM-OCT-S09-C247]
          Length = 449

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  ++  + R Y A  + I+ S  M  T +++
Sbjct: 403 SGSIERSNVDITEELVNLITSQRNYQAAAKAIETSTSMTQTIINI 447


>gi|153001470|ref|YP_001367151.1| flagellar basal body rod protein FlgG [Shewanella baltica OS185]
 gi|151366088|gb|ABS09088.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS185]
          Length = 262

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M++
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQMLS 256



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----HGSGGV 61
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE+++    + +GGV
Sbjct: 7  ISKTGLDAQQTDIAVISNNVANASTVG-------YKKSRAVFEDLLYQTVNQAGGV 55


>gi|127512281|ref|YP_001093478.1| flagellar basal body rod protein FlgG [Shewanella loihica PV-4]
 gi|126637576|gb|ABO23219.1| flagellar basal-body rod protein FlgG [Shewanella loihica PV-4]
          Length = 262

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M++
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQMLS 256



 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 7  ISKTGLDAQQTDISVISNNVANASTVG-------YKKSRAVFEDLLYQT 48


>gi|115523193|ref|YP_780104.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisA53]
 gi|115517140|gb|ABJ05124.1| flagellar basal body FlaE domain protein [Rhodopseudomonas
          palustris BisA53]
          Length = 411

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          L        SG+  QS ++  +++NIAN  TTG       Y+R +  F  +
Sbjct: 3  LYGVMRTGGSGMNAQSNKLSTVADNIANVNTTG-------YKRASTEFSSL 46



 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M E+ R Y AN +  +   D++   ++L R
Sbjct: 369 EQSNVDLASELTAMIESQRGYTANSKVFQTGADLLDVLVNLKR 411


>gi|262276417|ref|ZP_06054226.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886]
 gi|262220225|gb|EEY71541.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886]
          Length = 435

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  D+    R + AN ++++  + M  T L +
Sbjct: 389 KSGTIEQSNIDMTQELVDLITAQRNFQANSRSLEVGNQMQQTILQI 434



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 11/96 (11%)

Query: 7  SAHIANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSG-GV 61
          + +IA SGLA     M   S NIANA T           D Y      F      +G GV
Sbjct: 2  ALNIALSGLAAAQKDMNTTSNNIANANTFGFKESRAEFGDVYSAS--IFSNAKTTTGSGV 59

Query: 62 RVKKIGVDQSTFVEEFDPGHPVA---NASGIVKYPN 94
          +   +          +   +P+    + +G     N
Sbjct: 60 QTSIVAQQFHEGSSIY-TNNPLDLRISGNGYFSVAN 94


>gi|77359723|ref|YP_339298.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874634|emb|CAI85855.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 247

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NVN + E  DM    R +   ++ +K + ++  +   LLR
Sbjct: 199 SGALEMSNVNPVHEMVDMISHQRQFELQVKLMKTAEEIDQSQDQLLR 245


>gi|126175144|ref|YP_001051293.1| flagellar basal body rod protein FlgG [Shewanella baltica OS155]
 gi|217972600|ref|YP_002357351.1| flagellar basal body rod protein FlgG [Shewanella baltica OS223]
 gi|304409976|ref|ZP_07391595.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
 gi|307302311|ref|ZP_07582069.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
 gi|125998349|gb|ABN62424.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155]
 gi|217497735|gb|ACK45928.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS223]
 gi|304351385|gb|EFM15784.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
 gi|306914349|gb|EFN44770.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
          Length = 262

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M++
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQMLS 256



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----HGSGGV 61
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE+++    + +GGV
Sbjct: 7  ISKTGLDAQQTDIAVISNNVANASTVG-------YKKSRAVFEDLLYQTVNQAGGV 55


>gi|91785634|ref|YP_560840.1| putative flagellar hook protein FlgE [Burkholderia xenovorans
           LB400]
 gi|91689588|gb|ABE32788.1| putative flagellar hook protein FlgE [Burkholderia xenovorans
           LB400]
          Length = 503

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G V+  NV++  E  D+    R Y AN QTIK    +  T ++L
Sbjct: 460 GAVENSNVDLTSELVDLITAQRNYQANAQTIKTQQTVDQTLINL 503


>gi|95928662|ref|ZP_01311409.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
 gi|95135452|gb|EAT17104.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
          Length = 425

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  DM      Y AN + I  + +M+   ++L+R
Sbjct: 383 ELSNVDLSQEFVDMITIQNGYSANSKVITTTDEMLQEVINLIR 425


>gi|309388826|gb|ADO76706.1| flagellar hook-basal body protein [Halanaerobium praevalens DSM
           2228]
          Length = 548

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  N N+  E  +M    R + AN + I  S +M+   ++L R
Sbjct: 506 EMSNANLSQEFTNMITAQRGFQANSKLITTSDEMLQELVNLKR 548



 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL      M +   NI+N  T G       ++   ++F+E++  +
Sbjct: 1  MLRSMYAGVSGLNSHQQMMDVTGNNISNVNTVG-------FKSSRVTFKEMLSQT 48


>gi|323527713|ref|YP_004229866.1| flagellar hook-basal body protein [Burkholderia sp. CCGE1001]
 gi|323384715|gb|ADX56806.1| flagellar hook-basal body protein [Burkholderia sp. CCGE1001]
          Length = 502

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G V+  NV++  E  D+    R Y AN QTIK    +  T ++L
Sbjct: 459 GAVENSNVDLTSELVDLITAQRNYQANAQTIKTQQTVDQTLINL 502


>gi|251772412|gb|EES52979.1| flagellar basal-body rod protein FlgG [Leptospirillum
          ferrodiazotrophum]
          Length = 261

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S   A SG+  Q A + +I+ N+AN  TTG       Y+R+  +F+++M+ +
Sbjct: 1  MFRSLWNAASGMESQQANLDVITNNLANVNTTG-------YKRQRANFQDLMYQT 48



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NVNV  E  +M    R Y  +  +I+  + M+  T  L
Sbjct: 216 QSGFLEASNVNVAEELVNMVIGQRAYQMDASSIRTVNRMLGYTATL 261


>gi|238762359|ref|ZP_04623330.1| Lateral flagellar hook protein (FlgE-like) [Yersinia kristensenii
           ATCC 33638]
 gi|238699344|gb|EEP92090.1| Lateral flagellar hook protein (FlgE-like) [Yersinia kristensenii
           ATCC 33638]
          Length = 397

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G ++  NV++  E   +    R Y AN + I  +  MM     +L
Sbjct: 353 GALEASNVDLTAELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 397



 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IAN+GL+  + ++  IS NIAN+ T G       ++     F  +   S  + V   
Sbjct: 2  SFSIANTGLSAVTEQLNTISNNIANSATKG-------FKSGRTEFSSMYAQSQPLGVGVS 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTSQS 59


>gi|319405396|emb|CBI79015.1| Flagellar basal-body rod protein flgF [Bartonella sp. AR 15-3]
          Length = 244

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             +  D++ F    + G+      G ++  NVN ++E   + E +R +      ++Q  +
Sbjct: 174 SSVIPDRAAFQS--EEGNGDGVVQGYIESSNVNGVIEMTRLIEVSRAFERVEAMLRQQEE 231

Query: 124 MMTTTLDLL 132
           M + ++ +L
Sbjct: 232 MRSKSIQIL 240



 Score = 34.1 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 21 RMQIISENIANARTTGDTPGS 41
          RM+ I++N+AN  T G   G 
Sbjct: 18 RMETIAQNMANVNTPGFRAGG 38


>gi|170725956|ref|YP_001759982.1| flagellar basal body rod protein FlgF [Shewanella woodyi ATCC
           51908]
 gi|169811303|gb|ACA85887.1| flagellar basal-body rod protein FlgF [Shewanella woodyi ATCC
           51908]
          Length = 247

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 79  PGHP-VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P  P VA  SG V+  NVN + E   + +  R +   ++ +K + +M   +  L+R
Sbjct: 190 PADPRVAVESGAVEGSNVNAVDEMVSLIDIQRQFEMQVKMMKTAEEMDQASSSLMR 245


>gi|289208116|ref|YP_003460182.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp. K90mix]
 gi|288943747|gb|ADC71446.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp. K90mix]
          Length = 262

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVN+  E  +M ET R Y  N + I  +   + 
Sbjct: 216 QGSLETSNVNIAEELVNMIETQRAYEVNSKAISAADQSLQ 255



 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 7/67 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +  IA +GL  Q  RM  +S N+AN  TTG       +++    FE++++ +     
Sbjct: 1  MNQALWIAKTGLDAQHTRMSTVSNNLANVNTTG-------FKKDRAVFEDLIYQTVRQPG 53

Query: 64 KKIGVDQ 70
           +   DQ
Sbjct: 54 AQATQDQ 60


>gi|78355345|ref|YP_386794.1| flagella basal body rod domain-containing protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78217750|gb|ABB37099.1| flagella basal body rod domain protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 501

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV+   E  +M  T R + +  + +  +  M+   L+L R
Sbjct: 459 EMSNVDASREFVNMIITQRGFQSQSKVVTTADTMLQKALELKR 501



 Score = 37.2 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
          IAS +I  +G+   S  MQ+I  N+AN  T G
Sbjct: 3  IASLYIGATGMKTHSQGMQVIGNNLANINTVG 34


>gi|170758711|ref|YP_001787975.1| flagellar hook protein flgE [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169405700|gb|ACA54111.1| flagellar hook protein flgE [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 345

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  E  +M   NR + A  + I    +++   ++L R
Sbjct: 299 NGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVNLKR 345



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL  Q  ++ I+  NIANA TT        ++ ++I F++++  +
Sbjct: 1  MLRSMYSGISGLKAQQTKLDIVGNNIANANTTA-------FKSQSIRFQDMLSQN 48


>gi|260767769|ref|ZP_05876704.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
 gi|260617278|gb|EEX42462.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
 gi|315179399|gb|ADT86313.1| flagellar hook protein FlgE [Vibrio furnissii NCTC 11218]
          Length = 434

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  N+++  E  D+    R + AN + ++  + +    L +
Sbjct: 389 NGTLEQSNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNILQI 433



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 6/78 (7%)

Query: 10 IANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          ++ SGL+     +   S NIANA T           D Y   ++         GGV+  K
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVY-SNSLFTNAKTTPGGGVQANK 62

Query: 66 IGVDQSTFVEEFDPGHPV 83
          +          +   +P+
Sbjct: 63 VAQQFHEGSSIY-TNNPM 79


>gi|153940920|ref|YP_001391955.1| flagellar hook protein flgE [Clostridium botulinum F str.
           Langeland]
 gi|152936816|gb|ABS42314.1| flagellar hook protein flgE [Clostridium botulinum F str.
           Langeland]
 gi|295319974|gb|ADG00352.1| flagellar hook protein flgE [Clostridium botulinum F str. 230613]
          Length = 345

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  E  +M   NR + A  + I    +++   ++L R
Sbjct: 299 NGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVNLKR 345



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL  Q  ++ I+  NIANA TT        ++ ++I F++++  +
Sbjct: 1  MLRSMYSGISGLKAQQTKLDIVGNNIANANTTA-------FKSQSIRFQDMLSQN 48


>gi|149189836|ref|ZP_01868116.1| flagellar hook protein E [Vibrio shilonii AK1]
 gi|148836322|gb|EDL53279.1| flagellar hook protein E [Vibrio shilonii AK1]
          Length = 398

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S  IA SGL   + ++  IS NIANA T G       ++     F  V +G  +GGV V 
Sbjct: 2  SFDIALSGLDATNTQLNTISHNIANASTYG-------FKEARTEFSAVYNGMQAGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NV++  E  ++    R Y AN +TI  S  +    
Sbjct: 354 GALEGSNVDLTSELVNLMTAQRNYQANAKTISTSDKLTQAL 394


>gi|15615012|ref|NP_243315.1| flagellar basal body rod protein FlgG [Bacillus halodurans C-125]
 gi|10175069|dbj|BAB06168.1| flagellar hook protein [Bacillus halodurans C-125]
          Length = 263

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 217 AGTLEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVNLKR 263



 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGS-G 59
          ++ S +   SG+     ++ +I  NIAN  T G   G   ++    + ++       + G
Sbjct: 1  MLRSMYSGISGMRNFQTKLDVIGNNIANVNTFGYKKGRTTFQDMVSQQLAGATAPGANRG 60

Query: 60 GVRVKKIG 67
          GV  +++G
Sbjct: 61 GVNPRQVG 68


>gi|330943210|gb|EGH45617.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 133

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            NV+ + E  +M  T R Y  N + I  +  M+   
Sbjct: 94  SNVSTVEELVNMITTQRAYEMNSKVISTADQMLQNL 129


>gi|119947171|ref|YP_944851.1| flagellar hook-associated protein FlgK [Psychromonas ingrahamii
          37]
 gi|119865775|gb|ABM05252.1| flagellar hook-associated protein FlgK [Psychromonas ingrahamii
          37]
          Length = 454

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 10/67 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
          ++  +IA SG++     + I ++NIANA T G +       R+      +   +    GV
Sbjct: 1  MSIYNIALSGVSANRTALNITAQNIANANTAGHS-------RQQAVQSSITRSNDVGAGV 53

Query: 62 RVKKIGV 68
           V  I  
Sbjct: 54 EVSSIRR 60



 Score = 37.2 bits (86), Expect = 0.81,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              VN   E A++      Y AN++ I  ++ M  + L 
Sbjct: 414 LSGVNSDEEAANLMIYANAYEANMKVISTANQMFNSILR 452


>gi|157376214|ref|YP_001474814.1| flagellar basal body rod protein FlgG [Shewanella sediminis
           HAW-EB3]
 gi|157318588|gb|ABV37686.1| flagellar basal-body rod protein FlgG [Shewanella sediminis
           HAW-EB3]
          Length = 262

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M++
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQMLS 256



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 11/60 (18%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----HGSGGVRVKK 65
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE+++    + +GGV    
Sbjct: 7  ISKTGLDAQQTDISVISNNVANASTVG-------YKKSRAVFEDLLYQTVNQAGGVSASN 59


>gi|170694392|ref|ZP_02885546.1| protein of unknown function DUF1078 domain protein [Burkholderia
           graminis C4D1M]
 gi|170140815|gb|EDT08989.1| protein of unknown function DUF1078 domain protein [Burkholderia
           graminis C4D1M]
          Length = 502

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G V+  NV++  E  D+    R Y AN QTIK    +  T ++L
Sbjct: 459 GAVENSNVDLTSELVDLITAQRNYQANAQTIKTQQTVDQTLINL 502


>gi|254421122|ref|ZP_05034846.1| flagellar basal-body rod protein FlgG [Brevundimonas sp. BAL3]
 gi|196187299|gb|EDX82275.1| flagellar basal-body rod protein FlgG [Brevundimonas sp. BAL3]
          Length = 262

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G  +  NV+ + E + +    R Y  N + I  + +M++ T
Sbjct: 216 QGYTEASNVDSVAEISALIIAQRAYEMNSKVISTADNMLSVT 257



 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +   A SG+A Q   +++IS NIAN  T G       ++++   F+++++ +
Sbjct: 1  MQALRTAASGMAAQQLNVEVISNNIANMNTVG-------FKKQRAEFQDLLYQN 47


>gi|327478811|gb|AEA82121.1| flagellar basal-body rod protein FlgG [Pseudomonas stutzeri DSM
           4166]
          Length = 261

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G+++  NV V+     M    R Y AN + +  +  M  
Sbjct: 215 KQGVLEGSNVQVVEAMVAMIAIQRAYEANAKVLDAASGMQQ 255



 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 10/75 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---VMHGSGG 60
          + ++  ++ +GLA Q   M  ++ N+AN  T G       ++     FE+   V+    G
Sbjct: 1  MNSALWVSKTGLAAQDKAMATVANNLANVNTNG-------FKSDRAVFEDLFYVIEKQPG 53

Query: 61 VRVKKIGVDQSTFVE 75
           +  +I    S    
Sbjct: 54 AQADEINTVPSGIQL 68


>gi|187918157|ref|YP_001883720.1| flagellar hook protein FlgE [Borrelia hermsii DAH]
 gi|119861005|gb|AAX16800.1| flagellar hook protein FlgE [Borrelia hermsii DAH]
          Length = 442

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G+++  NV++  +  DM  T R + AN +TI  S  ++   + L
Sbjct: 396 AGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRL 440



 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 18/79 (22%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++        
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQSISGAS 53

Query: 56 ---HGSGGVRVKKIGVDQS 71
              G GGV  K++G+  S
Sbjct: 54 RPTDGRGGVNPKQVGLGMS 72


>gi|304392506|ref|ZP_07374446.1| flagellar basal-body rod protein FlgG [Ahrensia sp. R2A130]
 gi|303295136|gb|EFL89496.1| flagellar basal-body rod protein FlgG [Ahrensia sp. R2A130]
          Length = 262

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 69  DQSTFVEEFDPGHP--VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           D S   +   PG P       G ++  NV  + E   +    R Y  N + I+ + DM +
Sbjct: 196 DASGEPQVGTPGDPGYATIRQGYLESSNVESVKEITQLIAAQRGYEMNSKVIQAADDMAS 255



 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   + +I+ NIAN  TTG       ++R  + F ++++ +
Sbjct: 1  MRALSIAATGMQAQQKNLDVIAHNIANINTTG-------FKRGRVEFTDLIYDT 47


>gi|332533173|ref|ZP_08409042.1| flagellar basal-body rod protein FlgG [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037455|gb|EGI73909.1| flagellar basal-body rod protein FlgG [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 262

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV  E  ++ ET R+Y  N + I    +MM+
Sbjct: 217 QGSLETSNVNVTEELVNLIETQRIYEMNSKVISAVDEMMS 256



 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 10/58 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    +  I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 1  MNP---ALWISKTGLDAQQTDISVISNNLANASTVG-------YKKSRAIFEDLLYQN 48


>gi|304392493|ref|ZP_07374433.1| flagellar hook protein FlgE [Ahrensia sp. R2A130]
 gi|303295123|gb|EFL89483.1| flagellar hook protein FlgE [Ahrensia sp. R2A130]
          Length = 423

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L      + SG+  QS R+  +++N+AN  TTG       Y++ +  F +++       V
Sbjct: 3  LYGMMRTSVSGMQAQSNRLSTVADNVANVDTTG-------YKKYSTEFAQLVRPGASSGV 55

Query: 64 KK 65
            
Sbjct: 56 DS 57



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV +  E  DM    R Y AN +  +   D+M   ++L R
Sbjct: 377 SGALEQSNVELADELTDMIRAQRGYTANSKVFQTGADLMDVIVNLRR 423


>gi|291562027|emb|CBL40843.1| fagellar hook-basal body proteins [butyrate-producing bacterium
           SS3/4]
          Length = 305

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 28/47 (59%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E +DM  T R + AN + I  S ++++  +++ R
Sbjct: 259 TGYLEASNVDLAKEFSDMITTQRGFQANSKIITVSDEILSDLINMKR 305



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   A SGL     ++ +I  NIAN  T G       ++ ++ SF+E M+ +     
Sbjct: 1  MLRAMDSAVSGLRAHQNKLDVIGNNIANVNTFG-------FKSQSYSFKEAMYQTSTTST 53

Query: 64 KK 65
          K 
Sbjct: 54 KG 55


>gi|253682153|ref|ZP_04862950.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str.
           1873]
 gi|253561865|gb|EES91317.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str.
           1873]
          Length = 262

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G  +  NV++  E  D+  T R +  N   +K + +M     +L
Sbjct: 215 QGFTEQSNVDLGKEMTDLIVTQRAFQLNSSALKTADEMWGMANNL 259



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 26/87 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          ++ S   + SG+A +  ++  IS N+AN+ T G       Y+R  + F ++M  +     
Sbjct: 1  MLRSIWNSRSGMAAEMDKLDAISNNMANSTTVG-------YKRVDVKFNDLMQENLDRLG 53

Query: 59 --------------GGVRVKKIGVDQS 71
                        GGV+  +I  D +
Sbjct: 54 YPVSKGQGKLQVTGGGVKSTEIERDNA 80


>gi|238752866|ref|ZP_04614331.1| Lateral flagellar hook protein (FlgE-like) [Yersinia rohdei ATCC
           43380]
 gi|238708905|gb|EEQ01158.1| Lateral flagellar hook protein (FlgE-like) [Yersinia rohdei ATCC
           43380]
          Length = 411

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +G ++  NV++  E   +    R Y AN + I  +  MM     +L
Sbjct: 365 EAGALEASNVDLTAELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 411



 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IAN+GL+  + ++  IS NIAN+ T G       ++     F  +   S  + V   
Sbjct: 2  SFSIANTGLSAVTEQLSTISNNIANSATKG-------FKASRTEFASMYAQSQPLGVAVS 54

Query: 67 GVDQS 71
          GV QS
Sbjct: 55 GVSQS 59


>gi|119775448|ref|YP_928188.1| flagellar basal body rod protein FlgG [Shewanella amazonensis SB2B]
 gi|119767948|gb|ABM00519.1| flagellar basal-body rod protein FlgG [Shewanella amazonensis SB2B]
          Length = 262

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M+
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQML 255



 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 7  ISKTGLDAQQTDIAVISNNVANASTVG-------YKKSRAVFEDLLYQT 48


>gi|294140187|ref|YP_003556165.1| flagellar basal-body rod protein FlgG [Shewanella violacea DSS12]
 gi|293326656|dbj|BAJ01387.1| flagellar basal-body rod protein FlgG [Shewanella violacea DSS12]
          Length = 262

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M++
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQMLS 256



 Score = 40.3 bits (94), Expect = 0.079,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 7  ISKTGLDAQQTDISVISNNVANASTIG-------YKKSRAVFEDLLYQT 48


>gi|288958564|ref|YP_003448905.1| flagellar hook protein [Azospirillum sp. B510]
 gi|288910872|dbj|BAI72361.1| flagellar hook protein [Azospirillum sp. B510]
          Length = 881

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NV++  E   M  T R Y AN + +  S +M+   L L R
Sbjct: 838 VEASNVDIASEFTKMIVTQRGYSANAKVLTASDEMLQEVLGLKR 881



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 20/67 (29%)

Query: 8  AHIANS------GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
            I  S      GL  QS  +  IS+NIANA T G       Y+R   +F+ ++      
Sbjct: 1  MSIFGSRSSALMGLVAQSKALGNISDNIANASTAG-------YKRVDTTFQSMVLQSSPR 53

Query: 56 -HGSGGV 61
           H  GGV
Sbjct: 54 NHAPGGV 60


>gi|317047691|ref|YP_004115339.1| flagellar hook-basal body protein [Pantoea sp. At-9b]
 gi|316949308|gb|ADU68783.1| flagellar hook-basal body protein [Pantoea sp. At-9b]
          Length = 406

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y AN QTIK    ++ T ++L
Sbjct: 361 AGALEASNVDLSQELVNMIVAQRNYQANAQTIKTQDQILNTLVNL 405



 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL+  S+ + +I  NIAN+ T G       ++  TI+F ++  GS    G +V
Sbjct: 2  SFSQAVSGLSAASSNLDVIGNNIANSATAG-------FKSSTIAFADLFAGSDVGLGTKV 54

Query: 64 KKIGV 68
            +  
Sbjct: 55 AAVIQ 59


>gi|187778772|ref|ZP_02995245.1| hypothetical protein CLOSPO_02367 [Clostridium sporogenes ATCC
          15579]
 gi|187772397|gb|EDU36199.1| hypothetical protein CLOSPO_02367 [Clostridium sporogenes ATCC
          15579]
          Length = 266

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          M  L+ +   + SGL  Q  ++  IS N+AN  T G       Y+R+ +SF+E++ 
Sbjct: 1  MMILLRALWNSKSGLIAQQNKLDSISNNLANVNTVG-------YKREDVSFQELVQ 49



 Score = 40.7 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            G ++  NV+   E  +M  T R +  + + IK + +M
Sbjct: 220 QGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEM 257


>gi|2832235|gb|AAC01569.1| flagellar hook [Brucella abortus]
          Length = 396

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 55

Query: 57 GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
           SG V   V+    DQ              + +G   V+ P
Sbjct: 56 NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGP 96



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 350 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNLKR 396


>gi|83858806|ref|ZP_00952328.1| flagellar basal-body rod protein FlgG [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853629|gb|EAP91481.1| flagellar basal-body rod protein FlgG [Oceanicaulis alexandrii
           HTCC2633]
          Length = 261

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            V+  NV+ + E   + +  R Y  N + I  + +M+
Sbjct: 218 FVEVSNVDAVTEITSLIQAQRAYEMNARVITAADEML 254



 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +   A +G+  QS  +++IS N+AN  T         ++R+   FE++++ +
Sbjct: 1  MRALSTAATGMEAQSLAVEVISHNLANMNTIA-------FKRQRAEFEDLLYQT 47


>gi|297618421|ref|YP_003703580.1| flagellar basal-body rod protein FlgF [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297146258|gb|ADI03015.1| flagellar basal-body rod protein FlgF [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 256

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NV  + E  ++    R Y AN + ++     +   ++
Sbjct: 208 QGYLELSNVVAVKEMVELISVLRAYEANQKVVQAHDQTLDAAIN 251



 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 11/77 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---FEEVM-HGSG 59
          +I   + A SG+ +Q A+  +I+ N+ANA     TPG   +++       F ++M +  G
Sbjct: 1  MIRGLYTACSGMLLQLAKQDVIANNLANA----STPG---FKKDLAVCTAFPDMMINRLG 53

Query: 60 GVRVKKIGVDQSTFVEE 76
           V+V     +    V  
Sbjct: 54 EVKVVAGKEEPIPPVAI 70


>gi|24374755|ref|NP_718798.1| flagellar basal body rod protein FlgG [Shewanella oneidensis MR-1]
 gi|24349419|gb|AAN56242.1|AE015761_12 flagellar basal-body rod protein FlgG [Shewanella oneidensis MR-1]
          Length = 262

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M+
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQML 255



 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 7  ISKTGLDAQQTDISVISNNVANASTVG-------YKKSRAVFEDLLYQT 48


>gi|17988503|ref|NP_541136.1| flagellar hook protein FlgE [Brucella melitensis bv. 1 str. 16M]
 gi|256042866|ref|ZP_05445812.1| flagellar hook protein FlgE [Brucella melitensis bv. 1 str.
          Rev.1]
 gi|260564103|ref|ZP_05834588.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. 16M]
 gi|265989301|ref|ZP_06101858.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str.
          Rev.1]
 gi|38257707|sp|Q8YDL6|FLGE_BRUME RecName: Full=Flagellar hook protein flgE
 gi|17984295|gb|AAL53400.1| flagellar hook protein flge [Brucella melitensis bv. 1 str. 16M]
 gi|260151746|gb|EEW86839.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. 16M]
 gi|262999970|gb|EEZ12660.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str.
          Rev.1]
          Length = 396

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 55

Query: 57 GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
           SG V   V+    DQ              + +G   V+ P
Sbjct: 56 NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGP 96



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 350 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNLKR 396


>gi|317129200|ref|YP_004095482.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315474148|gb|ADU30751.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 397

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 355 EMSNVDLSEEFTEMIVAQRGFQANTRMITTSDEILQELVNLKR 397


>gi|260772274|ref|ZP_05881190.1| flagellar hook protein FlgE [Vibrio metschnikovii CIP 69.14]
 gi|260611413|gb|EEX36616.1| flagellar hook protein FlgE [Vibrio metschnikovii CIP 69.14]
          Length = 356

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++G+++  N+++  E  D+    R + AN + ++    +  T L +
Sbjct: 310 SNGVLEQSNIDMTQELVDLISAQRNFQANSRALEVHTGLQQTILQI 355


>gi|253574271|ref|ZP_04851613.1| flagellar basal body rod protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846748|gb|EES74754.1| flagellar basal body rod protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 300

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 13/85 (15%)

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
            F      + GVR    G D +                G ++  NV+      D+    R
Sbjct: 226 VFRVADEEAAGVRELVPGTDGAVVR------------QGYLEVSNVDTAQSMVDLLAAQR 273

Query: 110 LYMANLQTIKQSHDMMTTTL-DLLR 133
            Y +N + I+     +   + ++ +
Sbjct: 274 AYESNQKIIQYYDRSLDKAVNEIGK 298



 Score = 38.4 bits (89), Expect = 0.37,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++   + A SG+  +  R   +++NIAN  T G
Sbjct: 1  MLRGLYTAASGMIAEQRRHDTVTQNIANLNTPG 33


>gi|149202208|ref|ZP_01879181.1| flagellar hook protein FlgE [Roseovarius sp. TM1035]
 gi|149144306|gb|EDM32337.1| flagellar hook protein FlgE [Roseovarius sp. TM1035]
          Length = 419

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 25/48 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  +G V+  NV++  +  ++    R Y A+ + ++ +  +  T L++
Sbjct: 370 AIRAGSVERSNVDLTEQLVNLIMAQRNYQASAKALETNGTLADTVLNI 417



 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 15/72 (20%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSD-----PYRRKTISFEEVMHG 57
          S H A SGL      + + S NIAN  T G        +D     PY R           
Sbjct: 2  SFHTALSGLNAAQTDISVTSNNIANVGTLGFHGSRAEFADIYTTSPYSR------PASQI 55

Query: 58 SGGVRVKKIGVD 69
            G  V +IGVD
Sbjct: 56 GSGTEVSRIGVD 67


>gi|119469952|ref|ZP_01612757.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
 gi|119446662|gb|EAW27935.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
          Length = 262

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV  E  ++ ET R+Y  N + I    +MM+
Sbjct: 217 QGSLETSNVNVTEELVNLIETQRIYEMNSKVISAVDEMMS 256



 Score = 43.0 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 10/58 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    +  I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 1  MNP---ALWISKTGLDAQQTDISVISNNLANASTVG-------YKKSRAIFEDLLYQN 48


>gi|71906391|ref|YP_283978.1| flagellar hook protein FlgE [Dechloromonas aromatica RCB]
 gi|71846012|gb|AAZ45508.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078:Flagellar basal body FlaE [Dechloromonas
           aromatica RCB]
          Length = 442

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG V+  NV++  E  +M    R Y AN Q+IK    +M T +++
Sbjct: 396 QSGAVEDSNVDLTAELVNMIVQQRNYQANAQSIKTQDQIMQTLVNI 441



 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          SGL   S  + + S NIANA T G    S  +      +   + G G  +V  IGV  S 
Sbjct: 8  SGLNTSSKALDVTSNNIANASTVGFKSASTHFA---DVYAASLAGGGASQV-GIGVSASA 63

Query: 73 FVEEFDPGH 81
            ++F  G+
Sbjct: 64 IAQQFTQGN 72


>gi|311030122|ref|ZP_07708212.1| Flagellar hook protein FlgE [Bacillus sp. m3-13]
          Length = 493

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 447 SGTLEMSNVDLSEEFTEMITAQRGFQANTRIITTSDEILQELVNLKR 493



 Score = 33.7 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 18/75 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          ++ S + +   L     ++ +I  NIAN  T G       +++   +F+E+M        
Sbjct: 1  MLRSMYSSIGALRNFQTKLDVIGNNIANVNTYG-------FKKGRATFQEMMVQQLSGAS 53

Query: 56 ---HGSGGVRVKKIG 67
              G GGV  K+IG
Sbjct: 54 GPAAGKGGVNAKQIG 68


>gi|238924161|ref|YP_002937677.1| flagellar hook protein [Eubacterium rectale ATCC 33656]
 gi|238875836|gb|ACR75543.1| flagellar hook protein [Eubacterium rectale ATCC 33656]
          Length = 477

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +SG ++  NV++  +  DM  T R + AN + I  S  ++   ++L R
Sbjct: 430 SSGELEMSNVDLSSQFTDMIVTQRGFQANSRVITTSDTLLEELINLKR 477



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL     RM +I  NIAN  T       + ++  ++ F E+M+ +
Sbjct: 1  MMRSLYSAVSGLKTHQTRMDVIGNNIANVNT-------EAFKASSVRFSEIMYQT 48


>gi|125972995|ref|YP_001036905.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|256004792|ref|ZP_05429767.1| protein of unknown function DUF1078 domain protein [Clostridium
           thermocellum DSM 2360]
 gi|281417206|ref|ZP_06248226.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|125713220|gb|ABN51712.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|255991242|gb|EEU01349.1| protein of unknown function DUF1078 domain protein [Clostridium
           thermocellum DSM 2360]
 gi|281408608|gb|EFB38866.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|316940769|gb|ADU74803.1| flagellar hook-basal body protein [Clostridium thermocellum DSM
           1313]
          Length = 440

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  +M  T R + AN + I  S +M+   ++L R
Sbjct: 395 GTLEMSNVDLSKEFTEMIITQRGFQANSRIITTSDEMLQELVNLKR 440



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  + +      SGL     +M +I  N+AN  T G       ++   ++F+EV   +
Sbjct: 2  MRSMFSGV----SGLQAHQTKMDVIGNNVANVNTVG-------FKSSRVTFQEVFSQT 48


>gi|118444200|ref|YP_877983.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT]
 gi|118134656|gb|ABK61700.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT]
          Length = 485

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NV++  +  DM  T R + A+ + I    +++   ++L R
Sbjct: 439 QGMLEMSNVDLAEQFTDMIVTTRAFQASGKMISTGDEILQDIINLKR 485



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 7/60 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S +   SG+ V   ++ +   NIAN  TTG       ++   + F++++  + G  V
Sbjct: 1  MLRSMYAGISGMKVNQTKLDVTGNNIANVSTTG-------FKSSRVRFKDMLSQNMGEAV 53


>gi|62317957|ref|YP_223810.1| flagellar hook protein FlgE [Brucella abortus bv. 1 str. 9-941]
 gi|83269934|ref|YP_419225.1| flagellar hook protein FlgE [Brucella melitensis biovar Abortus
          2308]
 gi|189023208|ref|YP_001932949.1| flagellar hook protein FlgE [Brucella abortus S19]
 gi|225686885|ref|YP_002734857.1| flagellar hook protein FlgE [Brucella melitensis ATCC 23457]
 gi|254691611|ref|ZP_05154865.1| flagellar hook protein FlgE [Brucella abortus bv. 6 str. 870]
 gi|254731634|ref|ZP_05190212.1| flagellar hook protein FlgE [Brucella abortus bv. 4 str. 292]
 gi|256112177|ref|ZP_05453098.1| flagellar hook protein FlgE [Brucella melitensis bv. 3 str.
          Ether]
 gi|256256798|ref|ZP_05462334.1| flagellar hook protein FlgE [Brucella abortus bv. 9 str. C68]
 gi|256261978|ref|ZP_05464510.1| trypsin inhibitor Kunitz [Brucella melitensis bv. 2 str. 63/9]
 gi|260544142|ref|ZP_05819963.1| trypsin inhibitor Kunitz [Brucella abortus NCTC 8038]
 gi|260757242|ref|ZP_05869590.1| flagellar hook protein flgE [Brucella abortus bv. 6 str. 870]
 gi|260759393|ref|ZP_05871741.1| flagellar hook protein flgE [Brucella abortus bv. 4 str. 292]
 gi|260883046|ref|ZP_05894660.1| flagellar hook protein flgE [Brucella abortus bv. 9 str. C68]
 gi|265993603|ref|ZP_06106160.1| flagellar hook protein flgE [Brucella melitensis bv. 3 str.
          Ether]
 gi|297250151|ref|ZP_06933852.1| flagellar hook protein flgE [Brucella abortus bv. 5 str. B3196]
 gi|68845076|sp|O52070|FLGE_BRUAB RecName: Full=Flagellar hook protein flgE
 gi|12330680|gb|AAG52877.1| FlgE [Brucella abortus]
 gi|62198150|gb|AAX76449.1| FlgE, flagellar hook protein [Brucella abortus bv. 1 str. 9-941]
 gi|82940208|emb|CAJ13264.1| Flagellar basal body rod protein:Trypsin inhibitor Kunitz
          [Brucella melitensis biovar Abortus 2308]
 gi|189021782|gb|ACD74503.1| Trypsin inhibitor Kunitz [Brucella abortus S19]
 gi|225642990|gb|ACO02903.1| flagellar basal body FlaE domain protein [Brucella melitensis
          ATCC 23457]
 gi|260097413|gb|EEW81287.1| trypsin inhibitor Kunitz [Brucella abortus NCTC 8038]
 gi|260669711|gb|EEX56651.1| flagellar hook protein flgE [Brucella abortus bv. 4 str. 292]
 gi|260677350|gb|EEX64171.1| flagellar hook protein flgE [Brucella abortus bv. 6 str. 870]
 gi|260872574|gb|EEX79643.1| flagellar hook protein flgE [Brucella abortus bv. 9 str. C68]
 gi|262764473|gb|EEZ10505.1| flagellar hook protein flgE [Brucella melitensis bv. 3 str.
          Ether]
 gi|263091462|gb|EEZ15998.1| trypsin inhibitor Kunitz [Brucella melitensis bv. 2 str. 63/9]
 gi|297174020|gb|EFH33384.1| flagellar hook protein flgE [Brucella abortus bv. 5 str. B3196]
 gi|326411303|gb|ADZ68367.1| flagellar hook protein FlgE [Brucella melitensis M28]
 gi|326554592|gb|ADZ89231.1| flagellar hook protein FlgE [Brucella melitensis M5-90]
          Length = 396

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 55

Query: 57 GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
           SG V   V+    DQ              + +G   V+ P
Sbjct: 56 NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGP 96



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 350 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNLKR 396


>gi|238916755|ref|YP_002930272.1| flagellar hook protein FlgE [Eubacterium eligens ATCC 27750]
 gi|238872115|gb|ACR71825.1| flagellar hook protein FlgE [Eubacterium eligens ATCC 27750]
          Length = 464

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL     RM +I  NIAN  T         ++ ++++F EV + +
Sbjct: 24 MMRSMYSAVSGLKAHQTRMDVIGNNIANVNTVA-------FKSQSMTFSEVFYQT 71



 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +SG+++  NV++  E  +M  T R Y AN + I  S  ++   ++L R
Sbjct: 417 SSGVLEMSNVDLSSEFTNMITTQRGYQANSRIITVSDTLLEELINLKR 464


>gi|315649858|ref|ZP_07902941.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
 gi|315274832|gb|EFU38213.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
          Length = 274

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 19/45 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG V+  NVN+  E   M E  R Y    + +  S  MM     +
Sbjct: 228 SGFVEQSNVNLTDEMTKMMEVQRAYQLMARALSSSDTMMNLANTM 272



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +     R+ +I++N+AN  T G       Y++K  SF++V+    G
Sbjct: 12 MNALQQRLDVIADNMANVNTAG-------YKKKEASFDDVLTQVQG 50


>gi|291524892|emb|CBK90479.1| fagellar hook-basal body proteins [Eubacterium rectale DSM 17629]
          Length = 477

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +SG ++  NV++  +  DM  T R + AN + I  S  ++   ++L R
Sbjct: 430 SSGELEMSNVDLSSQFTDMIVTQRGFQANSRVITTSDTLLEELINLKR 477



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SGL     RM +I  NIAN  T       + ++  ++ F E+M+ +
Sbjct: 1  MMRSLYSAVSGLKTHQTRMDVIGNNIANVNT-------EAFKASSVRFSEIMYQT 48


>gi|91792666|ref|YP_562317.1| flagellar basal body rod protein FlgG [Shewanella denitrificans
           OS217]
 gi|91714668|gb|ABE54594.1| Flagellar basal-body rod FlgG [Shewanella denitrificans OS217]
          Length = 262

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           A   G ++  NVNV  E  ++ ++ R+Y  N + I     M+
Sbjct: 214 AIRQGALETSNVNVTEELVNLIQSQRIYEMNSKVISAVDQML 255



 Score = 41.5 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 7  ISKTGLDAQQTDISVISNNVANASTIG-------YKKSRAVFEDLLYQT 48


>gi|260779347|ref|ZP_05888239.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605511|gb|EEX31806.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450]
          Length = 362

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G       ++     F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYG-------FKGARTEFAAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56


>gi|83816512|ref|YP_446741.1| flagellar basal-body rod protein FlgG [Salinibacter ruber DSM
           13855]
 gi|294508677|ref|YP_003572736.1| flagellar basal-body rod protein FlgG [Salinibacter ruber M8]
 gi|83757906|gb|ABC46019.1| flagellar basal-body rod protein FlgG [Salinibacter ruber DSM
           13855]
 gi|294345006|emb|CBH25784.1| flagellar basal-body rod protein FlgG [Salinibacter ruber M8]
          Length = 262

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NV V+ E   + +  R Y  N + +  S +MM T 
Sbjct: 216 QGFLEKGNVKVVQEMTSLIQAQRTYELNSRMVTTSDEMMQTA 257



 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 7/52 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          S   A  G+  Q   +  I+ N++NA TTG       Y+R  + F+++++ +
Sbjct: 5  SLQTAALGMQAQQTSIDNIANNLSNANTTG-------YKRSRVVFQDLLYEN 49


>gi|261341494|ref|ZP_05969352.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
 gi|288316290|gb|EFC55228.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
          Length = 395

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NVN+  E   +    R Y AN + I  +  MMT    
Sbjct: 354 EGSNVNLTDELVGLMTAQRNYQANTKVISTNDSMMTALFQ 393



 Score = 38.8 bits (90), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 9/65 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IA SGL   + ++  IS NIAN+ T G       ++     F  +       GV V 
Sbjct: 2  SFDIAISGLNAINEQLGAISNNIANSGTVG-------FKSGRAEFASLYAEGQPLGVGVT 54

Query: 65 KIGVD 69
           +   
Sbjct: 55 NVAQS 59


>gi|254720773|ref|ZP_05182584.1| flagellar hook protein FlgE [Brucella sp. 83/13]
 gi|265985831|ref|ZP_06098566.1| flagellar hook protein flgE [Brucella sp. 83/13]
 gi|306840136|ref|ZP_07472921.1| flagellar hook protein FlgE [Brucella sp. NF 2653]
 gi|264664423|gb|EEZ34684.1| flagellar hook protein flgE [Brucella sp. 83/13]
 gi|306404781|gb|EFM61075.1| flagellar hook protein FlgE [Brucella sp. NF 2653]
          Length = 396

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 55

Query: 57 GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
           SG V   V+    DQ              + +G   V+ P
Sbjct: 56 NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGP 96



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   +++   ++L R
Sbjct: 350 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELIDVLVNLKR 396


>gi|167038783|ref|YP_001661768.1| flagellar basal body rod protein [Thermoanaerobacter sp. X514]
 gi|256751340|ref|ZP_05492219.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300913632|ref|ZP_07130949.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X561]
 gi|307723353|ref|YP_003903104.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X513]
 gi|166853023|gb|ABY91432.1| flagellar basal body rod protein [Thermoanaerobacter sp. X514]
 gi|256749722|gb|EEU62747.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300890317|gb|EFK85462.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X561]
 gi|307580414|gb|ADN53813.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X513]
          Length = 251

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDETLGKAVN 246



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++   + A+SG+  Q+  M +++ N+AN  T G       Y+R  +      +
Sbjct: 1  MLRGLYTASSGMITQTKIMDVLANNLANVNTVG-------YKRDVVVTSSFPN 46


>gi|289577406|ref|YP_003476033.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter italicus
           Ab9]
 gi|289527119|gb|ADD01471.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter italicus
           Ab9]
          Length = 251

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDETLGKAVN 246



 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 11/70 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A+SG+  Q   M +++ N+AN  TTG       Y+R  +      +      V
Sbjct: 1  MLRGLYAASSGMVTQIKIMDVLTNNLANVNTTG-------YKRDIVITSSFPN----FEV 49

Query: 64 KKIGVDQSTF 73
           + G D    
Sbjct: 50 TRYGGDNIPP 59


>gi|113969608|ref|YP_733401.1| flagellar basal body rod protein FlgG [Shewanella sp. MR-4]
 gi|113884292|gb|ABI38344.1| flagellar basal-body rod protein FlgG [Shewanella sp. MR-4]
          Length = 262

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M+
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQML 255



 Score = 42.2 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 7  ISKTGLDAQQTDIAVISNNVANASTVG-------YKKSRAVFEDLLYQT 48


>gi|332533174|ref|ZP_08409043.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037456|gb|EGI73910.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 244

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NVN + E  DM    R +   ++ +K + ++      LLR
Sbjct: 196 SGSLEMSNVNPVHEMVDMISHQRQFELQVKLMKTAEEIDERQDQLLR 242


>gi|256059804|ref|ZP_05449999.1| flagellar hook protein FlgE [Brucella neotomae 5K33]
 gi|261323784|ref|ZP_05962981.1| flagellar hook protein flgE [Brucella neotomae 5K33]
 gi|261299764|gb|EEY03261.1| flagellar hook protein flgE [Brucella neotomae 5K33]
          Length = 396

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 55

Query: 57 GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
           SG V   V+    DQ              + +G   V+ P
Sbjct: 56 NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGP 96



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 350 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 396


>gi|104782840|ref|YP_609338.1| flagellar basal body rod protein FlgG [Pseudomonas entomophila L48]
 gi|95111827|emb|CAK16551.1| Flagellar basal-body rod protein flgG [Pseudomonas entomophila L48]
          Length = 261

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            NV+ + E  +M  T R Y  N + I  +  M++
Sbjct: 222 SNVSTVEELVNMITTQRAYEMNSKVISAADKMLS 255



 Score = 44.1 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTG-------FKRDRAEFQDLLYQ 47


>gi|88811801|ref|ZP_01127055.1| flagellar hook protein [Nitrococcus mobilis Nb-231]
 gi|88791192|gb|EAR22305.1| flagellar hook protein [Nitrococcus mobilis Nb-231]
          Length = 400

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G ++  NVN+  +   M    R + AN Q I     +  + L++
Sbjct: 356 GALEKSNVNLTEQLVHMITAQRNFQANSQMISTQDQITQSILNI 399


>gi|302037627|ref|YP_003797949.1| flagellar basal-body rod protein FlgF [Candidatus Nitrospira
           defluvii]
 gi|300605691|emb|CBK42024.1| Flagellar basal-body rod protein FlgF [Candidatus Nitrospira
           defluvii]
          Length = 255

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            SG ++  NVN L E   M +  R Y +  + I+    M  T + DL R
Sbjct: 205 QSGHIEESNVNSLSEMVKMMQGMRSYESAQKLIQTMDRMTETAIQDLGR 253



 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 3/49 (6%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          SG   Q  ++ + + N+AN  T G       +R     F        GV
Sbjct: 10 SGAVAQEKQLTVFANNLANVNTAGFKQDQQGFRGL---FARASSTGTGV 55


>gi|224825777|ref|ZP_03698881.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum
           2002]
 gi|224602001|gb|EEG08180.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum
           2002]
          Length = 399

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++G ++  NV++  E  ++    R Y AN + I     ++   + 
Sbjct: 353 SAGSLEQSNVDMTAELVNLMSAQRNYQANTKVISTEGQVIQALMQ 397


>gi|291280053|ref|YP_003496888.1| flagellar basal-body rod protein [Deferribacter desulfuricans SSM1]
 gi|290754755|dbj|BAI81132.1| flagellar basal-body rod protein [Deferribacter desulfuricans SSM1]
          Length = 205

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 9/94 (9%)

Query: 46  RKTISFEEVMHGSGGVRVKK-IGVDQSTF--VEEFD------PGHPVANASGIVKYPNVN 96
           R  I F     G   V     I +D+     +E F+      P +      G ++  NV+
Sbjct: 109 RGEILFSTGREGKIEVSPDGSIYIDKEPLGKIELFNSSGNKVPENSYEILPGYLEASNVD 168

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  E  DM  T   + ANL+T K   +M+   +D
Sbjct: 169 LAKEIVDMIVTKNYFEANLKTTKVIDEMLGNIID 202


>gi|117919774|ref|YP_868966.1| flagellar basal body rod protein FlgG [Shewanella sp. ANA-3]
 gi|117612106|gb|ABK47560.1| flagellar basal-body rod protein FlgG [Shewanella sp. ANA-3]
          Length = 262

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M+
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQML 255



 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 7  ISKTGLDAQQTDIAVISNNVANASTVG-------YKKSRAVFEDLLYQT 48


>gi|262166282|ref|ZP_06034019.1| flagellar hook protein FlgE [Vibrio mimicus VM223]
 gi|262025998|gb|EEY44666.1| flagellar hook protein FlgE [Vibrio mimicus VM223]
          Length = 421

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++G ++  N+++  E  D+    R + AN + ++  + +    L +
Sbjct: 375 SNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNILQI 420


>gi|254699262|ref|ZP_05161090.1| flagellar hook protein FlgE [Brucella suis bv. 5 str. 513]
 gi|254706497|ref|ZP_05168325.1| flagellar hook protein FlgE [Brucella pinnipedialis M163/99/10]
 gi|254711218|ref|ZP_05173029.1| flagellar hook protein FlgE [Brucella pinnipedialis B2/94]
 gi|254711818|ref|ZP_05173629.1| flagellar hook protein FlgE [Brucella ceti M644/93/1]
 gi|254714887|ref|ZP_05176698.1| flagellar hook protein FlgE [Brucella ceti M13/05/1]
 gi|256015898|ref|YP_003105907.1| flagellar hook protein [Brucella microti CCM 4915]
 gi|256030153|ref|ZP_05443767.1| flagellar hook protein FlgE [Brucella pinnipedialis M292/94/1]
 gi|256158332|ref|ZP_05456236.1| flagellar hook protein FlgE [Brucella ceti M490/95/1]
 gi|256252734|ref|ZP_05458270.1| flagellar hook protein FlgE [Brucella ceti B1/94]
 gi|260166795|ref|ZP_05753606.1| flagellar hook protein FlgE [Brucella sp. F5/99]
 gi|261216577|ref|ZP_05930858.1| flagellar hook protein flgE [Brucella ceti M13/05/1]
 gi|261219813|ref|ZP_05934094.1| flagellar hook protein flgE [Brucella ceti B1/94]
 gi|261313950|ref|ZP_05953147.1| flagellar hook protein flgE [Brucella pinnipedialis M163/99/10]
 gi|261318810|ref|ZP_05958007.1| flagellar hook protein flgE [Brucella pinnipedialis B2/94]
 gi|261319447|ref|ZP_05958644.1| flagellar hook protein flgE [Brucella ceti M644/93/1]
 gi|261749702|ref|ZP_05993411.1| flagellar hook protein flgE [Brucella suis bv. 5 str. 513]
 gi|261756173|ref|ZP_05999882.1| trypsin inhibitor Kunitz [Brucella sp. F5/99]
 gi|265987183|ref|ZP_06099740.1| flagellar hook protein flgE [Brucella pinnipedialis M292/94/1]
 gi|265996846|ref|ZP_06109403.1| flagellar hook protein flgE [Brucella ceti M490/95/1]
 gi|255998558|gb|ACU50245.1| flagellar hook protein [Brucella microti CCM 4915]
 gi|260918397|gb|EEX85050.1| flagellar hook protein flgE [Brucella ceti B1/94]
 gi|260921666|gb|EEX88234.1| flagellar hook protein flgE [Brucella ceti M13/05/1]
 gi|261292137|gb|EEX95633.1| flagellar hook protein flgE [Brucella ceti M644/93/1]
 gi|261298033|gb|EEY01530.1| flagellar hook protein flgE [Brucella pinnipedialis B2/94]
 gi|261302976|gb|EEY06473.1| flagellar hook protein flgE [Brucella pinnipedialis M163/99/10]
 gi|261736157|gb|EEY24153.1| trypsin inhibitor Kunitz [Brucella sp. F5/99]
 gi|261739455|gb|EEY27381.1| flagellar hook protein flgE [Brucella suis bv. 5 str. 513]
 gi|262551143|gb|EEZ07304.1| flagellar hook protein flgE [Brucella ceti M490/95/1]
 gi|264659380|gb|EEZ29641.1| flagellar hook protein flgE [Brucella pinnipedialis M292/94/1]
          Length = 396

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 55

Query: 57 GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
           SG V   V+    DQ              + +G   V+ P
Sbjct: 56 NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGP 96



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 350 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 396


>gi|163802603|ref|ZP_02196495.1| flagellar hook protein E [Vibrio sp. AND4]
 gi|159173686|gb|EDP58505.1| flagellar hook protein E [Vibrio sp. AND4]
          Length = 437

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++G ++  N+++  E  D+    R + AN + ++  + +    L +
Sbjct: 391 SNGTLEQSNIDMTQELVDLISAQRNFQANSRALEVDNQLQQNILQI 436



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 4/39 (10%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG----DTPGSDPY 44
          ++ SGL+     +   S NIANA T G         D Y
Sbjct: 4  VSLSGLSSAQLDLNTTSNNIANANTYGFKESRAEFGDVY 42


>gi|225181603|ref|ZP_03735044.1| protein of unknown function DUF1078 domain protein [Dethiobacter
           alkaliphilus AHT 1]
 gi|225167711|gb|EEG76521.1| protein of unknown function DUF1078 domain protein [Dethiobacter
           alkaliphilus AHT 1]
          Length = 408

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV++  E  +M  T+R + AN + I  S D++   ++L R
Sbjct: 361 ETGTLEMSNVDLSYEFTEMITTSRGFQANSRVITTSDDLLQEVVNLKR 408



 Score = 40.7 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  S     SGL     +M +I  NIAN  TT        ++   + F++++  +
Sbjct: 1  MQRSLFTGVSGLRNHQTKMDVIGNNIANVNTTA-------FKAGRVRFQDILSQN 48


>gi|149188066|ref|ZP_01866361.1| flagellar hook protein E [Vibrio shilonii AK1]
 gi|148838054|gb|EDL54996.1| flagellar hook protein E [Vibrio shilonii AK1]
          Length = 432

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  N+++  E  D+    R + AN + +   + +    L +
Sbjct: 387 NGTLEQSNIDMTQELVDLISAQRNFQANSRALDVHNQLQQNILQI 431



 Score = 41.5 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 10 IANSGLAVQSARMQIISENIANART 34
          ++ SGL+     +   S NIANA T
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANT 28


>gi|94264101|ref|ZP_01287900.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93455517|gb|EAT05707.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 1058

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91   KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  NV++  E   M  T R + AN + I  + +M+   +++ R
Sbjct: 1016 EQSNVDLGTEFVKMITTQRGFQANSKMITTTDEMLNELINIKR 1058


>gi|114046840|ref|YP_737390.1| flagellar basal body rod protein FlgG [Shewanella sp. MR-7]
 gi|113888282|gb|ABI42333.1| flagellar basal-body rod protein FlgG [Shewanella sp. MR-7]
          Length = 262

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M+
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQML 255



 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 7  ISKTGLDAQQTDIAVISNNVANASTVG-------YKKSRAVFEDLLYQT 48


>gi|291529033|emb|CBK94619.1| fagellar hook-basal body proteins [Eubacterium rectale M104/1]
          Length = 477

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +SG ++  NV++  +  DM  T R + AN + I  S  ++   ++L R
Sbjct: 430 SSGELEMSNVDLSSQFTDMIVTQRGFQANSRVITTSDTLLEELINLKR 477



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++ S + A SGL     RM +I  NIAN  T       + ++  ++ F E+M+ + 
Sbjct: 1  MMRSLYSAVSGLKTHQTRMDVIGNNIANVNT-------EAFKASSVRFSEIMYQTA 49


>gi|157363238|ref|YP_001470005.1| hypothetical protein Tlet_0374 [Thermotoga lettingae TMO]
 gi|157313842|gb|ABV32941.1| protein of unknown function DUF1078 domain protein [Thermotoga
           lettingae TMO]
          Length = 249

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 4/50 (8%)

Query: 84  ANA----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           A+     SG V+  NVN + E  ++ E  R +  + + +  S + +   +
Sbjct: 193 ADEFRILSGYVELSNVNAIDEMVNLIEAQRHFEISQKALTVSDETLAKLI 242



 Score = 37.6 bits (87), Expect = 0.64,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 24/55 (43%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++   + A  G+ +  +++ + + N+AN  T         Y+R  ++F      +
Sbjct: 1  MLRGIYTAAMGMLLDMSKLDVTANNLANVETVA-------YKRDKLAFRAYQDRA 48


>gi|77359724|ref|YP_339299.1| flagellar basal body rod protein FlgG [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76874635|emb|CAI85856.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 262

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV  E  ++ ET R+Y  N + I    +MM+
Sbjct: 217 QGSLETSNVNVTEELVNLIETQRVYEMNSKVISAVDEMMS 256



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 10/58 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    +  I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 1  MNP---ALWISKTGLDAQQTDISVISNNLANASTVG-------YKKSRAVFEDLLYQN 48


>gi|283780136|ref|YP_003370891.1| flagellar basal body rod protein [Pirellula staleyi DSM 6068]
 gi|283438589|gb|ADB17031.1| flagellar basal body rod protein [Pirellula staleyi DSM 6068]
          Length = 250

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           SG ++   VN + E  +M  ++R Y  N++ I+    M  + +  LL+
Sbjct: 202 SGSLELSTVNPMQEMVEMIASSRAYENNIKMIQHHDGMTGSLVSRLLK 249



 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR-VKKIG 67
          I+ +G   Q+ ++++I+ N+AN  T+G       +  +     E  +   G R V  IG
Sbjct: 7  ISAAGAYAQNQKVEMITNNLANVDTSGFKKELGIFEARQSEAIERGYEQPGTRGVSDIG 65


>gi|121533754|ref|ZP_01665581.1| protein of unknown function DUF1078 domain protein [Thermosinus
           carboxydivorans Nor1]
 gi|121307745|gb|EAX48660.1| protein of unknown function DUF1078 domain protein [Thermosinus
           carboxydivorans Nor1]
          Length = 420

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E ++M  T R + AN + I  + +M+    +L R
Sbjct: 375 GTLEMSNVDLAQEFSNMIITQRGFQANSKIISVTDEMLQELANLKR 420



 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L A      SGL     RM +I  NIAN  T G       ++   ++F++++  +
Sbjct: 2  MRSLFAGV----SGLRNHQTRMDVIGNNIANVNTIG-------FKASRVNFQDILSQT 48


>gi|146293688|ref|YP_001184112.1| flagellar basal body rod protein FlgG [Shewanella putrefaciens
           CN-32]
 gi|145565378|gb|ABP76313.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens
           CN-32]
 gi|319427087|gb|ADV55161.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens 200]
          Length = 262

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M+
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQML 255



 Score = 41.8 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 7  ISKTGLDAQQTDIAVISNNVANASTVG-------YKKSRAVFEDLLYQT 48


>gi|296535149|ref|ZP_06897378.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
 gi|296264524|gb|EFH10920.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
          Length = 436

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E + M    R Y AN + +     +M+ T+D+LR
Sbjct: 393 IEASNVDITSEFSKMIVAQRAYSANSRVLSTVSGLMSETVDMLR 436



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L  S + A SGL  Q+A +  +S N+AN++TTG       Y+R   +F E +  S
Sbjct: 5  LNGSLYAATSGLGAQTAAITNVSNNVANSQTTG-------YKRVDTAFAEQLSQS 52


>gi|291519588|emb|CBK74809.1| fagellar hook-basal body proteins [Butyrivibrio fibrisolvens 16/4]
          Length = 582

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  +G ++  NV++  E  DM  T R + AN + I  S  M+   ++L R
Sbjct: 533 AMNTGQLEMANVDLSSEFTDMITTQRGFQANSRIITVSDTMLEELINLKR 582


>gi|297543693|ref|YP_003675995.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841468|gb|ADH59984.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 251

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDETLGKAVN 246



 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 11/70 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A+SG+  Q+  M +++ N+AN  TTG       Y+R  +      +      V
Sbjct: 1  MLRGLYAASSGMVTQTKIMDVLTNNLANVNTTG-------YKRDIVITSSFPN----FEV 49

Query: 64 KKIGVDQSTF 73
           + G D    
Sbjct: 50 TRYGGDNVPP 59


>gi|157376215|ref|YP_001474815.1| flagellar basal body rod protein FlgF [Shewanella sediminis
           HAW-EB3]
 gi|157318589|gb|ABV37687.1| flagellar basal-body rod protein FlgF [Shewanella sediminis
           HAW-EB3]
          Length = 247

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E  ++ +  R +   ++ +K + +M   +  L+R
Sbjct: 198 ESGAVEGSNVNAVDEMVNLIDIQRQFEMQVKMMKTAEEMDKASSSLMR 245


>gi|310659037|ref|YP_003936758.1| flagellar hook protein [Clostridium sticklandii DSM 519]
 gi|308825815|emb|CBH21853.1| flagellar hook protein [Clostridium sticklandii]
          Length = 418

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  +M  T R + AN + I  +  M+   ++L R
Sbjct: 373 GALEMSNVDLGKEFTNMIVTQRGFQANSRIISTTDQMLEELVNLKR 418



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 11/61 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSG 59
          ++ S + A S L     RM +I  NIAN  T G       Y+   ++F     +++ G+ 
Sbjct: 1  MMRSMNSAVSALRNHQLRMDVIGNNIANVNTIG-------YKSSRVTFKDSLSQMLRGAS 53

Query: 60 G 60
          G
Sbjct: 54 G 54


>gi|254695093|ref|ZP_05156921.1| flagellar hook protein FlgE [Brucella abortus bv. 3 str. Tulya]
 gi|261215444|ref|ZP_05929725.1| flagellar hook protein flgE [Brucella abortus bv. 3 str. Tulya]
 gi|260917051|gb|EEX83912.1| flagellar hook protein flgE [Brucella abortus bv. 3 str. Tulya]
          Length = 396

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 55

Query: 57 GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
           SG V   V+    DQ              + +G   V+ P
Sbjct: 56 NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGP 96



 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   +++ R
Sbjct: 350 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNMKR 396


>gi|237817504|ref|ZP_04596494.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
 gi|237787259|gb|EEP61477.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
          Length = 106

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 8/58 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-VMHGSGG 60
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F   V+  + G
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAG 53


>gi|311694362|gb|ADP97235.1| flagellar basal-body rod FlgF [marine bacterium HP15]
          Length = 250

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 79  PGHPVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           P  P AN   ASG ++  NVN + E     + +R Y   ++ +  +++    T  LL++
Sbjct: 191 PEPPDANQRVASGFLESSNVNAVEEMISNLQLSRQYEMQVKVMTTANENSEATARLLQN 249


>gi|23500854|ref|NP_700294.1| flagellar hook protein FlgE [Brucella suis 1330]
 gi|38257619|sp|Q8FUS9|FLGE_BRUSU RecName: Full=Flagellar hook protein FlgE
 gi|23464518|gb|AAN34299.1| flagellar hook protein FlgE [Brucella suis 1330]
          Length = 396

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 55

Query: 57 GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
           SG V   V+    DQ              + +G   V+ P
Sbjct: 56 NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGP 96



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 350 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 396


>gi|311105935|ref|YP_003978788.1| flagellar hook protein FlgE [Achromobacter xylosoxidans A8]
 gi|310760624|gb|ADP16073.1| flagellar hook protein FlgE [Achromobacter xylosoxidans A8]
          Length = 491

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QTIK   ++M   ++L
Sbjct: 452 SNVDMSKELVNMIIAQRTYQANSQTIKTQDEIMQVLMNL 490



 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 10/57 (17%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKI 66
          SGL   +  + +I  NIAN+ T G       ++  T SF +V   S    GV+V  I
Sbjct: 8  SGLNAAAQNLDVIGNNIANSGTVG-------FKSATASFADVYASSRVGLGVKVAAI 57


>gi|120598234|ref|YP_962808.1| flagellar basal body rod protein FlgG [Shewanella sp. W3-18-1]
 gi|120558327|gb|ABM24254.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1]
          Length = 262

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M+
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQML 255



 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 7/49 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 7  ISKTGLDAQQTDIAVISNNVANASTVG-------YKKSRAVFEDLLYQT 48


>gi|332296516|ref|YP_004438439.1| flagellar basal-body rod protein FlgG [Thermodesulfobium narugense
           DSM 14796]
 gi|332179619|gb|AEE15308.1| flagellar basal-body rod protein FlgG [Thermodesulfobium narugense
           DSM 14796]
          Length = 262

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 19/43 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             G+++  NV V+ E  ++    R Y +  + +     M++  
Sbjct: 213 EQGMLEMSNVQVVEEMVNLITAERAYESCAKGMTVCDQMLSDA 255



 Score = 40.3 bits (94), Expect = 0.079,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 11 ANSGLAVQSARMQIISENIANARTTG 36
          A SG+  Q+  + +I+ N+AN  TTG
Sbjct: 7  AASGMISQTTNVDVITNNLANVNTTG 32


>gi|307699899|ref|ZP_07636950.1| putative flagellar hook protein FlgE [Mobiluncus mulieris FB024-16]
 gi|307614937|gb|EFN94155.1| putative flagellar hook protein FlgE [Mobiluncus mulieris FB024-16]
          Length = 512

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  ++  + R + AN + I  S +++   + + R
Sbjct: 467 GAIEMSNVDLAAEFTNLILSQRGFQANTRVITTSDEILQELVSMKR 512



 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     SGL+V    + + S NIAN  TTG
Sbjct: 1  MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTG 33


>gi|269976274|ref|ZP_06183270.1| flagellar hook protein FlgE [Mobiluncus mulieris 28-1]
 gi|269935603|gb|EEZ92141.1| flagellar hook protein FlgE [Mobiluncus mulieris 28-1]
          Length = 472

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  ++  + R + AN + I  S +++   + + R
Sbjct: 427 GAIEMSNVDLAAEFTNLILSQRGFQANTRVITTSDEILQELVSMKR 472



 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     SGL+V    + + S NIAN  TTG
Sbjct: 1  MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTG 33


>gi|258621049|ref|ZP_05716083.1| flagellar hook protein [Vibrio mimicus VM573]
 gi|258625277|ref|ZP_05720185.1| flagellar hook protein [Vibrio mimicus VM603]
 gi|262170825|ref|ZP_06038503.1| flagellar hook protein FlgE [Vibrio mimicus MB-451]
 gi|258582450|gb|EEW07291.1| flagellar hook protein [Vibrio mimicus VM603]
 gi|258586437|gb|EEW11152.1| flagellar hook protein [Vibrio mimicus VM573]
 gi|261891901|gb|EEY37887.1| flagellar hook protein FlgE [Vibrio mimicus MB-451]
          Length = 434

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++G ++  N+++  E  D+    R + AN + ++  + +    L +
Sbjct: 388 SNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNILQI 433



 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 10 IANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSG-GVRVK 64
          I+ SGL+     +   S NIANA T           D Y   T  F       G GV+  
Sbjct: 4  ISLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVY--STSLFTNAKTTPGQGVQAA 61

Query: 65 KIGVDQSTFVEEFDPGHPV 83
          K+          +   +P+
Sbjct: 62 KVAQQFHEGSSIY-TNNPL 79


>gi|157692308|ref|YP_001486770.1| flagellar basal body rod protein FlgG [Bacillus pumilus SAFR-032]
 gi|157681066|gb|ABV62210.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032]
          Length = 263

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 8/63 (12%)

Query: 79  PGHPVANAS--------GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           P +P+            G ++  NV++  E  +M    R + +N +TI  S +++   ++
Sbjct: 201 PSNPIVPGEQGTGVIQTGKLEMSNVDLTDEFTEMIIAQRGFQSNAKTITTSDEILQELVN 260

Query: 131 LLR 133
           L R
Sbjct: 261 LKR 263


>gi|222053739|ref|YP_002536101.1| flagellar hook-associated protein FlgK [Geobacter sp. FRC-32]
 gi|221563028|gb|ACM19000.1| flagellar hook-associated protein FlgK [Geobacter sp. FRC-32]
          Length = 479

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------S 58
              IA  G+A Q   +++ SENIAN  T G       Y R+ +  E             
Sbjct: 5  DIFSIATRGIAAQRQAIEVTSENIANVNTPG-------YSRQRVIMESGPANIASGFPIG 57

Query: 59 GGVRVKKIGVD 69
          GGV V  +   
Sbjct: 58 GGVEVVAVQRS 68


>gi|294852968|ref|ZP_06793640.1| flagellar hook protein FlgE [Brucella sp. NVSL 07-0026]
 gi|294818623|gb|EFG35623.1| flagellar hook protein FlgE [Brucella sp. NVSL 07-0026]
          Length = 396

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 55

Query: 57 GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
           SG V   V+    DQ              + +G   V+ P
Sbjct: 56 NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGP 96



 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 350 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTDSELMDVLVNLKR 396


>gi|39995527|ref|NP_951478.1| flagellar hook protein FlgE [Geobacter sulfurreducens PCA]
 gi|39982290|gb|AAR33751.1| flagellar hook protein FlgE [Geobacter sulfurreducens PCA]
 gi|298504527|gb|ADI83250.1| flagellar hook protein FlgE [Geobacter sulfurreducens KN400]
          Length = 419

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  +   M  T R Y AN +TI  + +M+   L L R
Sbjct: 377 EQSNVDMAAQFVKMITTQRGYSANSKTITTADEMLQEVLSLKR 419


>gi|94267501|ref|ZP_01290900.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93451978|gb|EAT02688.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 1069

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91   KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  NV++  E   M  T R + AN + I  + +M+   +++ R
Sbjct: 1027 EQSNVDLGTEFVKMITTQRGFQANSKMITTTDEMLNELINIKR 1069



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L +S +   SGL+     M ++ +NIAN  TT        Y     +F++V+  S
Sbjct: 3  LSSSLYAGISGLSTMGNSMNVLGDNIANVNTTA-------YNASRATFQDVLSQS 50


>gi|306845419|ref|ZP_07477993.1| flagellar hook protein FlgE [Brucella sp. BO1]
 gi|306274162|gb|EFM55978.1| flagellar hook protein FlgE [Brucella sp. BO1]
          Length = 396

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 55

Query: 57 GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
           SG V   V+    DQ              + +G   V+ P
Sbjct: 56 NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGP 96



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 350 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 396


>gi|209966998|ref|YP_002299913.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
 gi|209960464|gb|ACJ01101.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
          Length = 655

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   +  T R Y AN + +  ++DM+   L+L R
Sbjct: 612 IEGSNVDIADEFTKLIVTQRAYSANTRVVTSANDMLVEVLNLGR 655



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 14/65 (21%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MHG 57
            +   A  GL  QS  +  IS+NIAN++T G       Y+R   SF+ +       +H 
Sbjct: 4  FGAMTTAVGGLTAQSRSLGHISDNIANSQTIG-------YKRVETSFQNLITQSNSSVHS 56

Query: 58 SGGVR 62
           GGVR
Sbjct: 57 PGGVR 61


>gi|74317652|ref|YP_315392.1| flagellar hook protein FlgE [Thiobacillus denitrificans ATCC 25259]
 gi|74057147|gb|AAZ97587.1| flagellar hook protein FlgE [Thiobacillus denitrificans ATCC 25259]
          Length = 405

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R+Y AN QTIK    ++ T ++L
Sbjct: 363 VEDSNVDLTAELVNMITAQRVYQANAQTIKSQDAVLQTLVNL 404


>gi|326791535|ref|YP_004309356.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
           5427]
 gi|326542299|gb|ADZ84158.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
           5427]
          Length = 432

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  E  DM  T R + AN + I  S +M+    +L R
Sbjct: 386 TGVLEMSNVDLSSEFTDMIVTQRGFQANSRIISVSDEMLQELTNLKR 432



 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A SGL V   RM +I  NIAN  T G       Y+ + ++F +V   +
Sbjct: 1  MMRSMFSAVSGLRVHQTRMDVIGNNIANVNTIG-------YKSQRVTFNDVFSQT 48


>gi|157147102|ref|YP_001454421.1| hypothetical protein CKO_02879 [Citrobacter koseri ATCC BAA-895]
 gi|157084307|gb|ABV13985.1| hypothetical protein CKO_02879 [Citrobacter koseri ATCC BAA-895]
          Length = 396

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            SG ++  NV++  E   +    R Y AN + I  + +MM     
Sbjct: 350 KSGALESSNVDLTSELVGLMTAQRNYQANTKVISTNDNMMNALFQ 394



 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S +IA SGL   + ++  IS NIAN+ T G       ++     F  +   S   GV V 
Sbjct: 2  SFNIATSGLNAITEQLNAISNNIANSGTVG-------FKSGRAEFSSLYAESQPLGVGVS 54

Query: 65 KIGVD 69
           +   
Sbjct: 55 GVTQS 59


>gi|89092136|ref|ZP_01165091.1| flagellar hook protein (FlgE)-like [Oceanospirillum sp. MED92]
 gi|89083871|gb|EAR63088.1| flagellar hook protein (FlgE)-like [Oceanospirillum sp. MED92]
          Length = 634

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSGG 60
          +A  + A +GL   S  + +I  NIAN+ T    T  T   D Y    +          G
Sbjct: 1  MAGFNTAVTGLKAASTDLDVIGNNIANSSTVGFKTSRTEFGDIYATAVVGAGSSNVAGSG 60

Query: 61 VRVKKIGVD 69
          V V  I  D
Sbjct: 61 VTVSDIAQD 69



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E   + E  R + AN +TI+  + +    L +
Sbjct: 594 EQSNVDLSAELVALIEAQRNFQANSKTIETQNTVTQAILQI 634


>gi|294675564|ref|YP_003576179.1| flagellar hook protein FlgE [Rhodobacter capsulatus SB 1003]
 gi|294474384|gb|ADE83772.1| flagellar hook protein FlgE [Rhodobacter capsulatus SB 1003]
          Length = 452

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 80  GHPVANASGIVK-YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             P     G  +    V+V  E  ++ +T R Y +N + I+   +M+  T ++ R
Sbjct: 398 DGPTGAVEGYAREGSAVDVAQELTNLIQTQRAYSSNAKVIQTVDEMLQETTNIKR 452



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 16/71 (22%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          + +S +   +GLA  + R+  IS+NIAN+ T G       Y+R T  FE ++        
Sbjct: 3  ISSSLNAGVAGLAANATRLATISDNIANSGTYG-------YKRATADFESMVLTQARSSG 55

Query: 56 -HGSGGVRVKK 65
           + +GGVR   
Sbjct: 56 TYSAGGVRASS 66


>gi|299822273|ref|ZP_07054159.1| flagellar hook protein FlgE [Listeria grayi DSM 20601]
 gi|299815802|gb|EFI83040.1| flagellar hook protein FlgE [Listeria grayi DSM 20601]
          Length = 411

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+R+++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKRQSVVFNDLLYQNTLGSV 53

Query: 64 KK 65
            
Sbjct: 54 TS 55



 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 369 EGSNVDLSQEFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411


>gi|212634350|ref|YP_002310875.1| flagellar basal body rod protein FlgG [Shewanella piezotolerans
           WP3]
 gi|212555834|gb|ACJ28288.1| Flagellar basal-body rod protein FlgG [Shewanella piezotolerans
           WP3]
          Length = 262

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M++
Sbjct: 214 AIRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQMLS 256



 Score = 41.5 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 11/60 (18%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----HGSGGVRVKK 65
          I+ +GL  Q   + +IS N+ANA T G       +++    FE+++    + +GGV    
Sbjct: 7  ISKTGLDAQQTDISVISNNVANASTVG-------FKKSRAVFEDLLYQNVNQAGGVSASN 59


>gi|51894131|ref|YP_076822.1| flagellar hook protein [Symbiobacterium thermophilum IAM 14863]
 gi|51857820|dbj|BAD41978.1| flagellar hook protein [Symbiobacterium thermophilum IAM 14863]
          Length = 418

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  +  +M  T R Y A+ + +  + DM+   ++L R
Sbjct: 373 GNLEGSNVDLAGQFTEMILTQRGYQASARVVSTADDMLQEIINLKR 418



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          SG+     RM +I  NIAN  TTG       ++   ++F +V + +
Sbjct: 9  SGIRSHQTRMDVIGNNIANVNTTG-------FKASRVTFTDVFNQT 47


>gi|320107029|ref|YP_004182619.1| flagellar hook-basal body protein [Terriglobus saanensis SP1PR4]
 gi|319925550|gb|ADV82625.1| flagellar hook-basal body protein [Terriglobus saanensis SP1PR4]
          Length = 408

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 7/57 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          + S  IA SGL   S  +  I  N+AN  +         Y+++ ++F ++ + + GV
Sbjct: 1  MPSFSIALSGLKADSVALDTIGNNLANMNSVA-------YKKQNVNFSDLFYQTIGV 50



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E A++    R + AN +T+     +   T+ ++R
Sbjct: 366 ELSNVDISTEFANLIVAQRAFEANSKTVTTFDTVTQDTIAMIR 408


>gi|254499121|ref|ZP_05111811.1| putative flagellar basal body rod protein [Legionella drancourtii
           LLAP12]
 gi|254351660|gb|EET10505.1| putative flagellar basal body rod protein [Legionella drancourtii
           LLAP12]
          Length = 237

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 26/44 (59%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NV  + E  DM +T+R + AN + ++ + +++ T ++
Sbjct: 187 QGFIEQSNVKSIDEMMDMVKTSRHFEANQRIMRTADNLLATAIN 230


>gi|253682640|ref|ZP_04863437.1| flagellar basal-body rod protein FlgG [Clostridium botulinum D str.
           1873]
 gi|253562352|gb|EES91804.1| flagellar basal-body rod protein FlgG [Clostridium botulinum D str.
           1873]
          Length = 333

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NV++  +  DM  T R + A+ + I    +++   ++L R
Sbjct: 287 QGMLEMSNVDLAEQFTDMIVTTRAFQASGKMISTGDEILQDIINLKR 333



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SG+ V   ++ +   NIAN  TT        ++   + F++++  +
Sbjct: 1  MLRSMYAGISGMKVNQTKLDVTGNNIANVSTTA-------FKGSRVRFQDMLSQN 48


>gi|323341367|ref|ZP_08081611.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
           25644]
 gi|323091244|gb|EFZ33872.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
           25644]
          Length = 256

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G+V+  NV+V    + M  T R Y  N + ++ + +M+ 
Sbjct: 210 QGLVELSNVDVADTMSKMIITQRAYQMNSKALQSTDEMLQ 249



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 9/67 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +     I+ SGL      M ++S N+AN  T G       Y+ K  +F+E+++   G   
Sbjct: 3  MSQILSISRSGLNAYQHEMDVVSNNLANVDTLG-------YKDKRTTFQELLN--NGTNA 53

Query: 64 KKIGVDQ 70
           ++G+ Q
Sbjct: 54 NEVGLSQ 60


>gi|86750895|ref|YP_487391.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           HaA2]
 gi|86573923|gb|ABD08480.1| Flagellar basal body rod protein [Rhodopseudomonas palustris HaA2]
          Length = 253

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 78  DPGHPVANA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           DPG P   A    G V+  NVN ++E   M +  R Y      ++Q  D+  T ++
Sbjct: 191 DPGAPDTKAIVRQGYVEKSNVNSVLEMTRMLDVTRSYQKMSSLLQQEGDLQKTAIE 246



 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 18/38 (47%), Gaps = 7/38 (18%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M +++ N+AN  T G       ++ +   F+E ++   
Sbjct: 19 MDVVANNLANMNTNG-------FKAQRSVFQEYLNTGA 49


>gi|167038474|ref|YP_001666052.1| flagellar basal body rod protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116869|ref|YP_004187028.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166857308|gb|ABY95716.1| flagellar basal body rod protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929960|gb|ADV80645.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 251

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDETLGKAVN 246



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 11/70 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A+SG+  Q+  M +++ N+AN  T G       Y+R  +      +      V
Sbjct: 1  MLRGLYTASSGMITQTKIMDVLANNLANVNTVG-------YKRDVVVTSPFPN----FEV 49

Query: 64 KKIGVDQSTF 73
           + G D +  
Sbjct: 50 TRHGGDNTPP 59


>gi|296133040|ref|YP_003640287.1| fagellar hook-basal body protein [Thermincola sp. JR]
 gi|296031618|gb|ADG82386.1| fagellar hook-basal body protein [Thermincola potens JR]
          Length = 419

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 374 GKLEMSNVDLSQEFTDMIITQRGFQANSRIITVSDEMLQELVNLKR 419



 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S     SGL     RM +I  NIAN  T G       Y++   +F++++  +
Sbjct: 1  MMRSMFAGVSGLRNHQVRMDVIGNNIANVNTIG-------YKKARATFQDILSQN 48


>gi|149191153|ref|ZP_01869411.1| flagellar hook protein E [Vibrio shilonii AK1]
 gi|148834991|gb|EDL51970.1| flagellar hook protein E [Vibrio shilonii AK1]
          Length = 408

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGVRVK 64
          S  IA SGL   ++ +  IS NIAN  TTG       ++     F  V  GS  GGV V 
Sbjct: 2  SFSIALSGLNASNSELNTISNNIANVSTTG-------FKESRTEFASVYSGSEAGGVEVV 54

Query: 65 KI 66
           +
Sbjct: 55 GV 56



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           SG ++  NV++  E   +    R Y AN ++I  S  +    
Sbjct: 363 SGALEGSNVDLTSELVALMTAQRNYQANTKSISTSDQLTQAL 404


>gi|85706142|ref|ZP_01037237.1| flagellar hook protein FlgE, putative [Roseovarius sp. 217]
 gi|85669306|gb|EAQ24172.1| flagellar hook protein FlgE, putative [Roseovarius sp. 217]
          Length = 448

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 22/38 (57%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E  DM +T R Y +N + I+   +M+  T +++R
Sbjct: 411 DVARELTDMIQTQRAYSSNAKVIQTVDEMLQETTNIIR 448



 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 14/68 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          + +S + + +GL   + R+  IS+NIAN+ T G       YRR    FE ++       +
Sbjct: 18 ISSSLNASVAGLNANATRLATISDNIANSSTFG-------YRRVEADFESLVISGRGGSY 70

Query: 57 GSGGVRVK 64
           +GGVR  
Sbjct: 71 SAGGVRAS 78


>gi|253998488|ref|YP_003050551.1| flagellar hook protein FlgE [Methylovorus sp. SIP3-4]
 gi|253985167|gb|ACT50024.1| flagellar basal body FlaE domain protein [Methylovorus sp. SIP3-4]
          Length = 402

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QTIK    ++ T ++L
Sbjct: 363 SNVDLTAELVNMITAQRYYQANAQTIKTQDQVLQTLVNL 401



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 19/100 (19%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG--- 59
          S     SGL   S  + +I  N+ANA T G        +D Y          ++GSG   
Sbjct: 2  SFQQGLSGLNAASKSLDVIGNNVANANTVGFKQSRAEFADVY-------ANALNGSGTGS 54

Query: 60 ---GVRVKKIGV--DQSTFVEEFDPGHPVANASGIVKYPN 94
             GV+V  I     Q       +P     N +G  +  N
Sbjct: 55 AGIGVKVADIQRQFTQGNITNTENPLDIAINGNGFFRLSN 94


>gi|148980302|ref|ZP_01815989.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
 gi|145961321|gb|EDK26631.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
          Length = 408

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGVRVK 64
          S  IA SGL   ++ +  IS NIAN  TTG       ++     F  V  GS  GGV V 
Sbjct: 2  SFSIALSGLNASNSELNTISNNIANVSTTG-------FKESRTEFASVYSGSEAGGVEVV 54

Query: 65 KI 66
           +
Sbjct: 55 GV 56



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           SG ++  NV++  E   +    R Y AN ++I  S  +    
Sbjct: 363 SGALEGSNVDLTSELVALMTAQRNYQANTKSISTSDQLTQAL 404


>gi|1272368|gb|AAA97476.1| LfgE [Vibrio parahaemolyticus]
          Length = 362

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G       ++     F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYG-------FKGARTEFAAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56


>gi|326389273|ref|ZP_08210841.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994636|gb|EGD53060.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 251

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDETLGKAVN 246



 Score = 42.2 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 11/70 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A+SG+  Q+  M ++  N+AN  T G       Y+R  +      +      V
Sbjct: 1  MLRGLYTASSGMITQTKIMDVLVNNLANVNTVG-------YKRDVVVTSSFPN----FEV 49

Query: 64 KKIGVDQSTF 73
           + G D +  
Sbjct: 50 TRHGGDNTPP 59


>gi|291518271|emb|CBK73492.1| fagellar hook-basal body proteins [Butyrivibrio fibrisolvens 16/4]
          Length = 267

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G+++  NVNV+ E   M    R Y A  + I+     +  T   + R
Sbjct: 218 QQGMLEASNVNVIDEMVSMITIARAYEAGQKMIQAEDSTLEKTANQIGR 266


>gi|56460250|ref|YP_155531.1| flagellar basal body rod protein FlgG [Idiomarina loihiensis L2TR]
 gi|56179260|gb|AAV81982.1| Flagella basal body rod protein [Idiomarina loihiensis L2TR]
          Length = 262

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV  E  ++ E+ R Y  N + I     M++
Sbjct: 217 QGALETSNVNVTEELVNLIESQRGYEMNSKVISSVDQMLS 256



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 10/58 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    +  I+ +GL  Q   + +IS N+AN+ T G       +++    FE++++ +
Sbjct: 1  MNP---ALWISKTGLDAQQRDISVISNNLANSSTIG-------FKKSRAVFEDLLYQN 48


>gi|78224295|ref|YP_386042.1| hypothetical protein Gmet_3103 [Geobacter metallireducens GS-15]
 gi|78195550|gb|ABB33317.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
          Length = 419

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  +   M  T R Y AN +TI  + +M+   L+L R
Sbjct: 377 EQSNVDMAAQFVKMITTQRGYSANSKTITTADEMLQEVLNLKR 419


>gi|117926844|ref|YP_867461.1| hypothetical protein Mmc1_3570 [Magnetococcus sp. MC-1]
 gi|117610600|gb|ABK46055.1| protein of unknown function DUF1078 domain protein [Magnetococcus
           sp. MC-1]
          Length = 496

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV++  E  +M  T R + AN + I  +  M+   + L R
Sbjct: 456 SNVDMSNEMVNMITTQRAFQANSRLITVTDGMLEELIALKR 496


>gi|308050372|ref|YP_003913938.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799]
 gi|307632562|gb|ADN76864.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799]
          Length = 468

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN + +  S+ +    L +
Sbjct: 427 EQSNVDLTTELVDLISAQRNFQANSRALDVSNQLSQNILQI 467



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I+ SGL      +   S NIAN  T G
Sbjct: 2  SFNISLSGLNAAQKDLNTTSNNIANVNTIG 31


>gi|270262401|ref|ZP_06190672.1| flagellar hook protein FlgE [Serratia odorifera 4Rx13]
 gi|270043085|gb|EFA16178.1| flagellar hook protein FlgE [Serratia odorifera 4Rx13]
          Length = 410

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 365 SGALEASNVDLSQELVNMIVAQRNYQSNAQTIKTQDSILQTLVSL 409



 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T+G       ++  T+SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATSG-------FKSGTVSFADMFAGSQVGLGVKV 54

Query: 64 KKIGV 68
            I  
Sbjct: 55 AGITQ 59


>gi|171059412|ref|YP_001791761.1| hypothetical protein Lcho_2731 [Leptothrix cholodnii SP-6]
 gi|170776857|gb|ACB34996.1| protein of unknown function DUF1078 domain protein [Leptothrix
           cholodnii SP-6]
          Length = 501

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E  +M    R+Y AN QTIK    ++ T ++L
Sbjct: 455 QSGSLEDSNVDLTAELVNMITAQRVYQANAQTIKTQDSVLQTLVNL 500


>gi|251797436|ref|YP_003012167.1| hypothetical protein Pjdr2_3448 [Paenibacillus sp. JDR-2]
 gi|247545062|gb|ACT02081.1| protein of unknown function DUF1078 domain protein [Paenibacillus
           sp. JDR-2]
          Length = 270

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  +G ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 221 AIIAGQLEMSNVDLTNEFTEMIVAQRGFQANSRIITTSDEILQEVVNLKR 270



 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 19/76 (25%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          ++ S +   SG+     ++ +I  NIAN  T G   G        + F +++  +     
Sbjct: 1  MLRSMYSGVSGMRGFQTKLDVIGNNIANVNTVGFKGG-------RVMFSDILSQTTSGVT 53

Query: 59 -------GGVRVKKIG 67
                 GGV  K+IG
Sbjct: 54 ASLEGEQGGVNAKQIG 69


>gi|126668558|ref|ZP_01739512.1| flagellar hook protein E [Marinobacter sp. ELB17]
 gi|126626963|gb|EAZ97606.1| flagellar hook protein E [Marinobacter sp. ELB17]
          Length = 435

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  ++    R Y AN +TI+ S  +  T ++L
Sbjct: 393 VEESNVDLSAELVNLIIAQRNYQANAKTIETSDAVTQTIINL 434



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          + +   SGL   +  + +   NIANA T G
Sbjct: 2  AFNTGLSGLRAAAVDLDVTGNNIANASTVG 31


>gi|229524192|ref|ZP_04413597.1| flagellar hook protein FlgE [Vibrio cholerae bv. albensis VL426]
 gi|229337773|gb|EEO02790.1| flagellar hook protein FlgE [Vibrio cholerae bv. albensis VL426]
          Length = 434

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++G ++  N+++  E  D+    R + AN + ++  + +    L +
Sbjct: 388 SNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNILQI 433



 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 10 IANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSG-GVRVK 64
          ++ SGL+     +   S NIANA T           D Y   T  F       G GV+  
Sbjct: 4  VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVY--STSLFTNAKTTPGQGVQAA 61

Query: 65 KIGVDQSTFVEEFDPGHPV 83
          K+          +   +P+
Sbjct: 62 KVAQQFHEGSSIY-TNNPL 79


>gi|325927872|ref|ZP_08189096.1| flagellar basal-body rod protein FlgB [Xanthomonas perforans
           91-118]
 gi|325541712|gb|EGD13230.1| flagellar basal-body rod protein FlgB [Xanthomonas perforans
           91-118]
          Length = 179

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 7/59 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
               +   +    L ++  RM++I+ N++N  T G       Y+ K ++FE  +  + G
Sbjct: 49  SPFSSFLGVHGDALTLREQRMKLIASNLSNVDTPG-------YKAKDLNFEAALKSAQG 100


>gi|307266108|ref|ZP_07547653.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918890|gb|EFN49119.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 251

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDETLGKAVN 246



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 11/70 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A+SG+  Q+  M +++ N+AN  T G       Y+R  +      +      V
Sbjct: 1  MLRGLYTASSGMITQTKIMDVLANNLANVNTVG-------YKRDVVVTSSFPN----FEV 49

Query: 64 KKIGVDQSTF 73
           + G D +  
Sbjct: 50 TRHGGDNTPP 59


>gi|315497625|ref|YP_004086429.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48]
 gi|315415637|gb|ADU12278.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48]
          Length = 472

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  +V++  E  ++  T R Y AN +TI  + +M+   L++ R
Sbjct: 427 GTLEASDVDLSEEFTNLIVTQRAYSANSRTITTADEMLQELLNIKR 472



 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          L AS     +GLA  S  +  IS NIAN+ TT        Y+R    F+ ++  S 
Sbjct: 3  LSASMQAGVAGLAANSNALSAISNNIANSTTTA-------YKRVRTDFQSIVTASS 51


>gi|170755157|ref|YP_001782254.1| flagellar basal body rod protein FlgG [Clostridium botulinum B1
          str. Okra]
 gi|169120369|gb|ACA44205.1| flagellar basal body rod protein [Clostridium botulinum B1 str.
          Okra]
          Length = 263

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 7/46 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + SGL  Q  ++  IS N+AN  T G       Y+R+ +SF+E++ 
Sbjct: 8  SKSGLIAQQNKLDSISNNLANVNTVG-------YKREDVSFQELVQ 46



 Score = 41.1 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 5/49 (10%)

Query: 81  HPVANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  AN       G ++  NV+   E  +M  T R +  + + IK + +M
Sbjct: 206 NVFANNDVSILQGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEM 254


>gi|3493240|gb|AAC33326.1| hook associated protein I homolog [Caulobacter crescentus CB15]
          Length = 397

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 7/60 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L A    A SG+      +++ S+NIAN  TTG       Y RKT+S   ++    GV V
Sbjct: 3  LNAIMSTATSGMMAAQTGLRVTSDNIANVNTTG-------YVRKTVSQSNLLSNGMGVGV 55


>gi|146293689|ref|YP_001184113.1| flagellar basal body rod protein FlgF [Shewanella putrefaciens
           CN-32]
 gi|145565379|gb|ABP76314.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens
           CN-32]
 gi|319427088|gb|ADV55162.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens 200]
          Length = 247

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 79  PGHPV-ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P  P  A  SG V+  NVN + E   + E  R +   ++ +K + ++   +  L+R
Sbjct: 190 PADPNVAVESGAVEGSNVNPVDEMVSLIELQRQFEMQVKMMKTAEEIDRASSSLMR 245


>gi|312879594|ref|ZP_07739394.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260]
 gi|310782885|gb|EFQ23283.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260]
          Length = 554

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++    R + AN + I  S  ++   ++L R
Sbjct: 512 EMANVDLSQEFVNLIVAQRGFQANARVITTSDQVLEELINLKR 554


>gi|310644366|ref|YP_003949125.1| fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
 gi|309249317|gb|ADO58884.1| Fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
          Length = 275

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NVN+  E  DM +  R+Y    + +  S  MM    +L
Sbjct: 229 SGYLEESNVNLAGEMTDMMQVQRMYQMAARALTSSDTMMNLANNL 273



 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 7/36 (19%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
           R+ +I++NIAN  T G       Y+ K  SFE+V+
Sbjct: 17 QRLDLIADNIANVNTVG-------YKSKQGSFEDVL 45


>gi|313200563|ref|YP_004039221.1| flagellar basal body flae domain-containing protein [Methylovorus
           sp. MP688]
 gi|312439879|gb|ADQ83985.1| flagellar basal body FlaE domain protein [Methylovorus sp. MP688]
          Length = 402

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QTIK    ++ T ++L
Sbjct: 363 SNVDLTAELVNMITAQRYYQANAQTIKTQDQVLQTLVNL 401



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 19/100 (19%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG--- 59
          S     SGL   S  + +I  N+ANA T G        +D Y          ++GSG   
Sbjct: 2  SFQQGLSGLNAASKSLDVIGNNVANANTVGFKQSRAEFADVY-------ANALNGSGTGS 54

Query: 60 ---GVRVKKIGV--DQSTFVEEFDPGHPVANASGIVKYPN 94
             GV+V  I     Q       +P     N +G  +  N
Sbjct: 55 AGIGVKVADIQRQFTQGNITNTENPLDIAINGNGFFRLSN 94


>gi|310644367|ref|YP_003949126.1| flagellar basal body rod protein [Paenibacillus polymyxa SC2]
 gi|309249318|gb|ADO58885.1| Flagellar basal body rod protein [Paenibacillus polymyxa SC2]
          Length = 294

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            G ++  NV+      DM    R Y AN + I+
Sbjct: 246 QGYLEVSNVDAAQSMVDMMAALRAYEANQKVIQ 278



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++   + A +G+  Q  R   +++NIAN  TTG
Sbjct: 1  MLRGLYTAAAGMMTQQRRHDTVTQNIANMNTTG 33


>gi|253997380|ref|YP_003049444.1| flagellar basal body rod protein [Methylotenera mobilis JLW8]
 gi|253984059|gb|ACT48917.1| flagellar basal body rod protein [Methylotenera mobilis JLW8]
          Length = 99

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 30/117 (25%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           SG+    AR+ + + NIAN  T       D + RK +   +     GG RV  I      
Sbjct: 8   SGMNAAQARLDVAANNIANLST-------DNFTRKEVV--QADLPGGGTRVADIKS---- 54

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                      A  +G       N+  +  +  +    YM NL   K ++DM+  T+
Sbjct: 55  -----------AAQAGS------NLEADMVEQLQARNTYMTNLSVFKSNNDMLMGTI 94


>gi|212640499|ref|YP_002317019.1| flagellar basal body rod protein [Anoxybacillus flavithermus WK1]
 gi|212561979|gb|ACJ35034.1| Flagellar basal body rod protein [Anoxybacillus flavithermus WK1]
          Length = 262

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
            ++  NV++     DM    R + AN + ++     M     ++ R
Sbjct: 215 HIERSNVDLSRTMTDMLSAYRAFEANQKILQAYDKSMDKAANEIGR 260



 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          +    + A SG+  Q  R+++++ NIANA T G        R 
Sbjct: 1  MFRGLYTAASGMLSQQRRIEMMTNNIANANTPGYKADQASLRA 43


>gi|91204383|emb|CAJ70883.1| strongly similar to flagellar distal rod protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 262

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV  + E   +    R Y  N + I  S +M++T   + R
Sbjct: 216 QGFLENSNVETVTELVSLITAQRAYEINSRAISASDEMLSTINSMAR 262



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ + + A +G+  Q   +  +S N++N  TTG       ++R  ++F+++++ 
Sbjct: 1  MLRALYTAATGMKAQQLFLDNVSNNLSNINTTG-------FKRSQVNFQDLLYS 47


>gi|297580843|ref|ZP_06942768.1| flagellar hook protein FlgE [Vibrio cholerae RC385]
 gi|297534669|gb|EFH73505.1| flagellar hook protein FlgE [Vibrio cholerae RC385]
          Length = 434

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++G ++  N+++  E  D+    R + AN + ++  + +    L +
Sbjct: 388 SNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNILQI 433



 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 10 IANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSG-GVRVK 64
          ++ SGL+     +   S NIANA T           D Y   T  F       G GV+  
Sbjct: 4  VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVY--STSLFTNAKTTPGQGVQAA 61

Query: 65 KIGVDQSTFVEEFDPGHPV 83
          K+          +   +P+
Sbjct: 62 KVAQQFHEGSSIY-TNNPL 79


>gi|302670255|ref|YP_003830215.1| flagellar hook protein FlgE2 [Butyrivibrio proteoclasticus B316]
 gi|302394728|gb|ADL33633.1| flagellar hook protein FlgE2 [Butyrivibrio proteoclasticus B316]
          Length = 572

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +SG+++  NV++  E  DM  T R + AN + I  S +++     L R
Sbjct: 525 SSGVLEASNVDLAKEFTDMITTQRGFQANSRVITTSDELLQVLKGLKR 572



 Score = 41.5 bits (97), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A SGL      M +I  NIAN  TT        Y+ +   F++V++ +
Sbjct: 1  MMRSLWSAVSGLQTHQLEMDVIGNNIANVNTTS-------YKSQATGFQDVLYQT 48


>gi|149184207|ref|ZP_01862525.1| hypothetical protein ED21_25853 [Erythrobacter sp. SD-21]
 gi|148831527|gb|EDL49960.1| hypothetical protein ED21_25853 [Erythrobacter sp. SD-21]
          Length = 261

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E   +    R + AN + I  +  +  T ++L
Sbjct: 215 SGALERSNVDIAEELVGLITAQRNFQANAKAIDTATQISQTVINL 259


>gi|121601652|ref|YP_989405.1| putative flagellar basal-body rod protein FlgF [Bartonella
           bacilliformis KC583]
 gi|120613829|gb|ABM44430.1| putative flagellar basal-body rod protein FlgF [Bartonella
           bacilliformis KC583]
          Length = 244

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 23/46 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G V+  NVN + E   + E +R +      ++Q  +M + ++ +L
Sbjct: 195 QGYVESSNVNGVAEMTRLIEVSRAFERVEAMLRQQEEMRSKSIQIL 240


>gi|15642196|ref|NP_231828.1| flagellar hook protein FlgE [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121586263|ref|ZP_01676053.1| flagellar hook protein FlgE [Vibrio cholerae 2740-80]
 gi|121726540|ref|ZP_01679789.1| flagellar hook protein FlgE [Vibrio cholerae V52]
 gi|147674037|ref|YP_001217714.1| flagellar hook protein FlgE [Vibrio cholerae O395]
 gi|153213649|ref|ZP_01948922.1| flagellar hook protein FlgE [Vibrio cholerae 1587]
 gi|153817107|ref|ZP_01969774.1| flagellar hook protein FlgE [Vibrio cholerae NCTC 8457]
 gi|153820826|ref|ZP_01973493.1| flagellar hook protein FlgE [Vibrio cholerae B33]
 gi|153825324|ref|ZP_01977991.1| flagellar hook protein FlgE [Vibrio cholerae MZO-2]
 gi|153829329|ref|ZP_01981996.1| flagellar hook protein FlgE [Vibrio cholerae 623-39]
 gi|183179565|ref|ZP_02957776.1| flagellar hook protein FlgE [Vibrio cholerae MZO-3]
 gi|227082321|ref|YP_002810872.1| flagellar hook protein FlgE [Vibrio cholerae M66-2]
 gi|229507726|ref|ZP_04397231.1| flagellar hook protein FlgE [Vibrio cholerae BX 330286]
 gi|229512079|ref|ZP_04401558.1| flagellar hook protein FlgE [Vibrio cholerae B33]
 gi|229513841|ref|ZP_04403303.1| flagellar hook protein FlgE [Vibrio cholerae TMA 21]
 gi|229519215|ref|ZP_04408658.1| flagellar hook protein FlgE [Vibrio cholerae RC9]
 gi|229522146|ref|ZP_04411563.1| flagellar hook protein FlgE [Vibrio cholerae TM 11079-80]
 gi|229528798|ref|ZP_04418188.1| flagellar hook protein FlgE [Vibrio cholerae 12129(1)]
 gi|229607230|ref|YP_002877878.1| flagellar hook protein FlgE [Vibrio cholerae MJ-1236]
 gi|254225801|ref|ZP_04919406.1| flagellar hook protein FlgE [Vibrio cholerae V51]
 gi|254849326|ref|ZP_05238676.1| flagellar hook protein FlgE [Vibrio cholerae MO10]
 gi|255747104|ref|ZP_05421049.1| flagellar hook protein FlgE [Vibrio cholera CIRS 101]
 gi|262161352|ref|ZP_06030462.1| flagellar hook protein FlgE [Vibrio cholerae INDRE 91/1]
 gi|262167777|ref|ZP_06035479.1| flagellar hook protein FlgE [Vibrio cholerae RC27]
 gi|262191689|ref|ZP_06049865.1| flagellar hook protein FlgE [Vibrio cholerae CT 5369-93]
 gi|298500425|ref|ZP_07010230.1| flagellar hook protein FlgE [Vibrio cholerae MAK 757]
 gi|9656753|gb|AAF95342.1| flagellar hook protein FlgE [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121549529|gb|EAX59555.1| flagellar hook protein FlgE [Vibrio cholerae 2740-80]
 gi|121630993|gb|EAX63372.1| flagellar hook protein FlgE [Vibrio cholerae V52]
 gi|124115848|gb|EAY34668.1| flagellar hook protein FlgE [Vibrio cholerae 1587]
 gi|125621707|gb|EAZ50036.1| flagellar hook protein FlgE [Vibrio cholerae V51]
 gi|126512375|gb|EAZ74969.1| flagellar hook protein FlgE [Vibrio cholerae NCTC 8457]
 gi|126521618|gb|EAZ78841.1| flagellar hook protein FlgE [Vibrio cholerae B33]
 gi|146315920|gb|ABQ20459.1| flagellar hook protein FlgE [Vibrio cholerae O395]
 gi|148875170|gb|EDL73305.1| flagellar hook protein FlgE [Vibrio cholerae 623-39]
 gi|149741008|gb|EDM55077.1| flagellar hook protein FlgE [Vibrio cholerae MZO-2]
 gi|183012976|gb|EDT88276.1| flagellar hook protein FlgE [Vibrio cholerae MZO-3]
 gi|227010209|gb|ACP06421.1| flagellar hook protein FlgE [Vibrio cholerae M66-2]
 gi|227014093|gb|ACP10303.1| flagellar hook protein FlgE [Vibrio cholerae O395]
 gi|229332572|gb|EEN98058.1| flagellar hook protein FlgE [Vibrio cholerae 12129(1)]
 gi|229341071|gb|EEO06076.1| flagellar hook protein FlgE [Vibrio cholerae TM 11079-80]
 gi|229343904|gb|EEO08879.1| flagellar hook protein FlgE [Vibrio cholerae RC9]
 gi|229349022|gb|EEO13979.1| flagellar hook protein FlgE [Vibrio cholerae TMA 21]
 gi|229352044|gb|EEO16985.1| flagellar hook protein FlgE [Vibrio cholerae B33]
 gi|229355231|gb|EEO20152.1| flagellar hook protein FlgE [Vibrio cholerae BX 330286]
 gi|229369885|gb|ACQ60308.1| flagellar hook protein FlgE [Vibrio cholerae MJ-1236]
 gi|254845031|gb|EET23445.1| flagellar hook protein FlgE [Vibrio cholerae MO10]
 gi|255735506|gb|EET90906.1| flagellar hook protein FlgE [Vibrio cholera CIRS 101]
 gi|262023842|gb|EEY42541.1| flagellar hook protein FlgE [Vibrio cholerae RC27]
 gi|262028663|gb|EEY47317.1| flagellar hook protein FlgE [Vibrio cholerae INDRE 91/1]
 gi|262032428|gb|EEY50990.1| flagellar hook protein FlgE [Vibrio cholerae CT 5369-93]
 gi|297541118|gb|EFH77172.1| flagellar hook protein FlgE [Vibrio cholerae MAK 757]
 gi|327484716|gb|AEA79123.1| Flagellar hook protein FlgE [Vibrio cholerae LMA3894-4]
          Length = 434

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++G ++  N+++  E  D+    R + AN + ++  + +    L +
Sbjct: 388 SNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNILQI 433



 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 10 IANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSG-GVRVK 64
          ++ SGL+     +   S NIANA T           D Y   T  F       G GV+  
Sbjct: 4  VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVY--STSLFTNAKTTPGQGVQAA 61

Query: 65 KIGVDQSTFVEEFDPGHPV 83
          K+          +   +P+
Sbjct: 62 KVAQQFHEGSSIY-TNNPL 79


>gi|188582486|ref|YP_001925931.1| flagellar basal-body rod protein FlgG [Methylobacterium populi
           BJ001]
 gi|179345984|gb|ACB81396.1| flagellar basal-body rod protein FlgG [Methylobacterium populi
           BJ001]
          Length = 263

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN + E + +    R Y  N + +  +  M++TT  + R
Sbjct: 223 NVNAVTEISSLIAAQRAYEMNSKVVTAADQMLSTTSQMFR 262



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A +G+A Q   +Q+IS NIAN RTTG       Y+R+ + F+++++ +
Sbjct: 7  AATGMAAQELNVQVISNNIANLRTTG-------YKRQQVHFQDLLYQN 47


>gi|332533175|ref|ZP_08409044.1| flagellar hook protein FlgE [Pseudoalteromonas haloplanktis
          ANT/505]
 gi|332037457|gb|EGI73911.1| flagellar hook protein FlgE [Pseudoalteromonas haloplanktis
          ANT/505]
          Length = 455

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG-GV 61
          S +IA +GLA     + + + NIAN  TTG        +D Y      F      +G GV
Sbjct: 2  SFNIALTGLAAAQKDLDVTANNIANVNTTGFKESRAEFADVYASS--VFSSGKTKNGDGV 59

Query: 62 RVKKIGV 68
          +   +  
Sbjct: 60 QTTMVAQ 66



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  N N+  E  D+    R Y AN + ++ +  +  + L +
Sbjct: 414 EQSNTNLTNELVDLITAQRNYQANSRALEVNSTIQQSILQI 454


>gi|261211322|ref|ZP_05925610.1| flagellar hook protein FlgE [Vibrio sp. RC341]
 gi|260839277|gb|EEX65903.1| flagellar hook protein FlgE [Vibrio sp. RC341]
          Length = 434

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++G ++  N+++  E  D+    R + AN + ++  + +    L +
Sbjct: 388 SNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNILQI 433



 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 10 IANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSG-GVRVK 64
          ++ SGL+     +   S NIANA T           D Y   T  F       G GV+  
Sbjct: 4  VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVY--STSLFTNAKTTPGQGVQAA 61

Query: 65 KIGVDQSTFVEEFDPGHPV 83
          K+          +   +P+
Sbjct: 62 KVAQQFHEGSSIY-TNNPL 79


>gi|332296627|ref|YP_004438550.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
 gi|332179730|gb|AEE15419.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
          Length = 559

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  +  ++  T R Y AN + I  S  M+   L L
Sbjct: 515 EMSNVDLSQQFTNLITTERGYEANARVITTSDQMLQDLLSL 555



 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ +   A SGL      M +I  NIAN  T G       ++  T++F +++  +
Sbjct: 1  MLRAMSSAVSGLQNNQTAMDVIGNNIANVNTIG-------FKASTVTFSQMLSQT 48


>gi|315127353|ref|YP_004069356.1| flagellar hook protein E [Pseudoalteromonas sp. SM9913]
 gi|315015867|gb|ADT69205.1| flagellar hook protein E [Pseudoalteromonas sp. SM9913]
          Length = 440

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG-GV 61
          S +IA +GLA     + + + NIAN  TTG        +D Y      F      +G GV
Sbjct: 2  SFNIALTGLAAAQKDLDVTANNIANVNTTGFKESRAEFADVYASS--VFSAGKTKNGDGV 59

Query: 62 RVKKIGV 68
          +   +  
Sbjct: 60 QTTMVAQ 66



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NVN+  E  D+    R + AN + ++ +  +    L +
Sbjct: 399 EQSNVNLTNELVDLISAQRNFQANSRALEVNSTIQQNILQI 439


>gi|229918635|ref|YP_002887281.1| hypothetical protein EAT1b_2922 [Exiguobacterium sp. AT1b]
 gi|229470064|gb|ACQ71836.1| protein of unknown function DUF1078 domain protein [Exiguobacterium
           sp. AT1b]
          Length = 303

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 257 SGALEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVNLKR 303


>gi|260767923|ref|ZP_05876857.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
 gi|260615953|gb|EEX41138.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
          Length = 398

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G       ++     F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYG-------FKGARTEFSAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NV++  E   +    R Y AN +TI     +    
Sbjct: 354 GALEGSNVDLTSELVSLMTAQRNYQANAKTISTEDKLTQAL 394


>gi|269796390|ref|YP_003315845.1| flagellar hook protein FlgE [Sanguibacter keddieii DSM 10542]
 gi|269098575|gb|ACZ23011.1| flagellar hook protein FlgE [Sanguibacter keddieii DSM 10542]
          Length = 394

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  ++    R + AN + I  S +++   ++L R
Sbjct: 349 GALEMSNVDLSQEFTNLIIAQRGFQANSRVITTSDELLQELVNLKR 394



 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 4/33 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          L +      SGL      + +   NIAN  TTG
Sbjct: 5  LFSGI----SGLRTHQTMLDVTGNNIANVNTTG 33


>gi|315179626|gb|ADT86540.1| flagellar hook protein E [Vibrio furnissii NCTC 11218]
          Length = 398

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G       ++     F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYG-------FKGARTEFSAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NV++  E   +    R Y AN +TI     +    
Sbjct: 354 GALEGSNVDLTSELVSLMTAQRNYQANAKTISTEDKLTQAL 394


>gi|293605003|ref|ZP_06687399.1| flagellar hook protein FlgE [Achromobacter piechaudii ATCC 43553]
 gi|292816608|gb|EFF75693.1| flagellar hook protein FlgE [Achromobacter piechaudii ATCC 43553]
          Length = 489

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y AN QTIK   ++M   ++L
Sbjct: 448 EASNVDMSKELVNMIIAQRTYQANSQTIKTQDEIMQVLMNL 488



 Score = 38.8 bits (90), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 10/57 (17%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKI 66
          SGL   +  + +I  NIAN+ T G       ++  T SF +V   S    GV+V  I
Sbjct: 8  SGLNAAAQNLDVIGNNIANSGTVG-------FKSATASFADVYASSRVGLGVKVAAI 57


>gi|73539450|ref|YP_299817.1| flagellar hook protein FlgE [Ralstonia eutropha JMP134]
 gi|72122787|gb|AAZ64973.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078:Flagellar basal body FlaE [Ralstonia eutropha
           JMP134]
          Length = 417

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 24/42 (57%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  ++    R Y AN +TI+  + +M + +++
Sbjct: 376 VEASNVDLSGELVNLIVAQRNYQANAKTIETQNQVMNSLMNM 417



 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIGVD 69
          SG+   +A + +I  NIAN+ T G       Y+  T  F +V  G+    G  V  +   
Sbjct: 8  SGINAAAANLDVIGNNIANSNTVG-------YKASTAQFADVYAGTKIGLGTTVNSVVQS 60


>gi|226950050|ref|YP_002805141.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
          Kyoto]
 gi|226841546|gb|ACO84212.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
          Kyoto]
          Length = 263

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 7/46 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + SGL  Q  ++  IS N+AN  T G       Y+R+ +SF+E++ 
Sbjct: 8  SKSGLIAQQNKLDSISNNLANVNTVG-------YKREDVSFQELVQ 46



 Score = 41.1 bits (96), Expect = 0.060,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            G ++  NV+   E  +M  T R +  + + IK + +M
Sbjct: 217 QGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEM 254


>gi|168182721|ref|ZP_02617385.1| flagellar basal body rod protein [Clostridium botulinum Bf]
 gi|237796077|ref|YP_002863629.1| flagellar basal body rod protein FlgG [Clostridium botulinum Ba4
          str. 657]
 gi|182674133|gb|EDT86094.1| flagellar basal body rod protein [Clostridium botulinum Bf]
 gi|229261217|gb|ACQ52250.1| flagellar basal body rod protein [Clostridium botulinum Ba4 str.
          657]
          Length = 263

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 7/46 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + SGL  Q  ++  IS N+AN  T G       Y+R+ +SF+E++ 
Sbjct: 8  SKSGLIAQQNKLDSISNNLANVNTVG-------YKREDVSFQELVQ 46



 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 5/49 (10%)

Query: 81  HPVANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  AN       G ++  NV+   E  +M  T R +  + + IK + +M
Sbjct: 206 NVFANNDVSILQGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEM 254


>gi|322806967|emb|CBZ04537.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
          H04402 065]
          Length = 263

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 7/46 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + SGL  Q  ++  IS N+AN  T G       Y+R+ +SF+E++ 
Sbjct: 8  SKSGLIAQQNKLDSISNNLANVNTVG-------YKREDVSFQELVQ 46



 Score = 40.7 bits (95), Expect = 0.060,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            G ++  NV+   E  +M  T R +  + + IK + +M
Sbjct: 217 QGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEM 254


>gi|187925761|ref|YP_001897403.1| hypothetical protein Bphyt_3791 [Burkholderia phytofirmans PsJN]
 gi|187716955|gb|ACD18179.1| protein of unknown function DUF1078 domain protein [Burkholderia
           phytofirmans PsJN]
          Length = 503

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G V+  NV++  E  ++    R Y AN QTIK    +  T ++L
Sbjct: 460 GAVENSNVDLTSELVNLITAQRNYQANAQTIKTQQTVDQTLINL 503


>gi|91204389|emb|CAJ70889.1| similar to flagellar hook protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 532

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E   +    R +  N + I  + +++   ++L R
Sbjct: 486 NGYLEASNVDMTSELTSLIMAQRGFQLNSRVISTADEVLAEAVNLKR 532


>gi|317406201|gb|EFV86450.1| flagellar hook protein FlgE [Achromobacter xylosoxidans C54]
          Length = 495

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QTIK   ++M   ++L
Sbjct: 456 SNVDMSKELVNMIIAQRTYQANSQTIKTQDEIMQVLMNL 494



 Score = 36.4 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 10/59 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIGV 68
          SGL   +  + +I  NIAN+ T G       ++  T SF +V   S    G +V  I  
Sbjct: 8  SGLNAAAQNLDVIGNNIANSGTVG-------FKSSTASFADVYASSRVGLGTKVAAITQ 59


>gi|295687864|ref|YP_003591557.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
 gi|295429767|gb|ADG08939.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
          Length = 425

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L A+   A SGL  QS  +  ISENIAN+ TT        Y+   + F+ ++ G  G
Sbjct: 3  LSAALSTAVSGLTAQSRALSAISENIANSSTTA-------YKTTDVYFQALVSGGKG 52


>gi|197120124|ref|YP_002140551.1| flagellar basal body rod protein FlgF [Geobacter bemidjiensis Bem]
 gi|197089484|gb|ACH40755.1| flagellar basal body rod protein FlgF [Geobacter bemidjiensis Bem]
          Length = 238

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  NV V+VE A M E +R +    + +K   DM    + +L +
Sbjct: 189 KQGYLESSNVKVVVEMARMIEASRYFETCAKAVKSYDDMTAKAVNELGK 237



 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 9/46 (19%)

Query: 11 ANSG-LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          A SG L+ Q  R+ +IS N+AN+ T+G       ++   I FE V+
Sbjct: 8  ALSGNLSAQR-RLDVISNNLANSNTSG-------FKADQIQFESVL 45


>gi|153954739|ref|YP_001395504.1| hypothetical protein CKL_2121 [Clostridium kluyveri DSM 555]
 gi|219855203|ref|YP_002472325.1| hypothetical protein CKR_1860 [Clostridium kluyveri NBRC 12016]
 gi|146347597|gb|EDK34133.1| FlgK [Clostridium kluyveri DSM 555]
 gi|219568927|dbj|BAH06911.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 632

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 7/75 (9%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT------PGSDPYRRKTISFEEV 54
          M  L +  + A SGL  Q   + + S NIANA T G +        + PY   +++   +
Sbjct: 1  MPGLFSIFNTAKSGLFAQQTSINVTSHNIANAETEGYSRQRATLVTTTPYTMPSMNAATI 60

Query: 55 MHGSG-GVRVKKIGV 68
              G GV V  I  
Sbjct: 61 AGQLGTGVTVASIDR 75



 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E  ++ +    Y AN + I    +++   ++ L+
Sbjct: 591 SGVSLDEEMTNLIQFQHCYQANAKMISTVDELLDVVINGLK 631


>gi|15895408|ref|NP_348757.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum
           ATCC 824]
 gi|15025131|gb|AAK80097.1|AE007715_2 Flagellar basal body rod protein [Clostridium acetobutylicum ATCC
           824]
 gi|325509554|gb|ADZ21190.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum
           EA 2018]
          Length = 256

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            ++  NV++  E  DM    R Y  N ++++   +M +
Sbjct: 212 YLENSNVDLGTEMTDMIVAQRAYQINSKSLETGDNMWS 249



 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 7/44 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          SG+A +  ++  IS N+AN+ TTG       Y+ +T+ F ++++
Sbjct: 10 SGMAAEQEKLDSISNNLANSSTTG-------YKSETVGFSDLLY 46


>gi|28900122|ref|NP_799777.1| flagellar hook protein FlgE [Vibrio parahaemolyticus RIMD
          2210633]
 gi|153837072|ref|ZP_01989739.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ3810]
 gi|260365772|ref|ZP_05778268.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030]
 gi|260880694|ref|ZP_05893049.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034]
 gi|260897700|ref|ZP_05906196.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466]
 gi|260899389|ref|ZP_05907784.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037]
 gi|28808405|dbj|BAC61610.1| LfgE [Vibrio parahaemolyticus RIMD 2210633]
 gi|149749660|gb|EDM60405.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ3810]
 gi|308086228|gb|EFO35923.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466]
 gi|308092098|gb|EFO41793.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034]
 gi|308109176|gb|EFO46716.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037]
 gi|308114990|gb|EFO52530.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030]
 gi|328470101|gb|EGF41012.1| flagellar hook protein FlgE [Vibrio parahaemolyticus 10329]
          Length = 398

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G       ++     F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYG-------FKGARTEFAAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56



 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NV++  E   +    R Y AN +TI  S  +    
Sbjct: 354 GALEGSNVDLTSELVALMTAQRNYQANAKTISTSDKLTQAL 394


>gi|308186393|ref|YP_003930524.1| Flagellar hook protein FlgE [Pantoea vagans C9-1]
 gi|308056903|gb|ADO09075.1| Flagellar hook protein FlgE [Pantoea vagans C9-1]
          Length = 418

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y AN QTIK    ++ T ++L
Sbjct: 373 AGALESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQILNTLVNL 417



 Score = 37.6 bits (87), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   S+ + +I  NIAN+ T G       ++  TI+F ++  GS    G +V
Sbjct: 2  SFSQAVSGLGAASSNLDVIGNNIANSATAG-------FKSSTIAFADMFAGSNVGLGTKV 54

Query: 64 KKIGV 68
            +  
Sbjct: 55 AAVIQ 59


>gi|119469951|ref|ZP_01612756.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
 gi|119446661|gb|EAW27934.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
          Length = 247

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NVN + E  DM    R +   ++ +K + D+  +   L+R
Sbjct: 199 SGTLEMSNVNPVHEMVDMISHQRQFELQVKLMKTAEDLDRSQDQLMR 245


>gi|227876747|ref|ZP_03994856.1| flagellar hook protein [Mobiluncus mulieris ATCC 35243]
 gi|306817694|ref|ZP_07451436.1| flagellar hook protein FlgE [Mobiluncus mulieris ATCC 35239]
 gi|227842644|gb|EEJ52844.1| flagellar hook protein [Mobiluncus mulieris ATCC 35243]
 gi|304649508|gb|EFM46791.1| flagellar hook protein FlgE [Mobiluncus mulieris ATCC 35239]
          Length = 466

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  ++  + R + AN + I  S +++   + + R
Sbjct: 421 GAIEMSNVDLAAEFTNLILSQRGFQANTRVITTSDEILQELVSMKR 466



 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     SGL+V    + + S NIAN  TTG
Sbjct: 1  MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTG 33


>gi|153940763|ref|YP_001391938.1| flagellar basal body rod protein FlgG [Clostridium botulinum F
          str. Langeland]
 gi|152936659|gb|ABS42157.1| flagellar basal body rod protein [Clostridium botulinum F str.
          Langeland]
 gi|295319958|gb|ADG00336.1| flagellar basal body rod protein [Clostridium botulinum F str.
          230613]
          Length = 263

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 7/46 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + SGL  Q  ++  IS N+AN  T G       Y+R+ +SF+E++ 
Sbjct: 8  SKSGLIAQQNKLDSISNNLANVNTVG-------YKREDVSFQELVQ 46



 Score = 40.7 bits (95), Expect = 0.063,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            G ++  NV+   E  +M  T R +  + + IK + +M
Sbjct: 217 QGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEM 254


>gi|332524834|ref|ZP_08401025.1| flagellar basal body rod protein [Rubrivivax benzoatilyticus JA2]
 gi|332108134|gb|EGJ09358.1| flagellar basal body rod protein [Rubrivivax benzoatilyticus JA2]
          Length = 164

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 31/130 (23%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D +  +A  + SGL     R+ +   N+AN      T G   +RR+    +       GV
Sbjct: 64  DVVTPAASASLSGLNAAQTRLDVAGHNVAN----SLTEG---FRRQ--VAQPATAQPVGV 114

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V    +             P A +         ++  +T  M E    + ANL   +  
Sbjct: 115 TVSIAQM-------------PEAGS---------DLAADTVGMIEARHAFGANLMVFRAQ 152

Query: 122 HDMMTTTLDL 131
             M ++ LD+
Sbjct: 153 DAMSSSLLDI 162


>gi|251799753|ref|YP_003014484.1| flagellar basal body rod protein [Paenibacillus sp. JDR-2]
 gi|247547379|gb|ACT04398.1| flagellar basal body rod protein [Paenibacillus sp. JDR-2]
          Length = 288

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            G V+  NV+    + D+    R Y AN + I+
Sbjct: 240 QGYVERSNVDAAQSSVDLMAALRAYEANQKVIQ 272


>gi|161621182|ref|YP_001595068.1| flagellar hook protein FlgE [Brucella canis ATCC 23365]
 gi|254702383|ref|ZP_05164211.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686]
 gi|260568714|ref|ZP_05839183.1| flagellar hook protein FlgE [Brucella suis bv. 4 str. 40]
 gi|261752946|ref|ZP_05996655.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686]
 gi|161337993|gb|ABX64297.1| flagellar basal body FlaE domain protein [Brucella canis ATCC
          23365]
 gi|260155379|gb|EEW90460.1| flagellar hook protein FlgE [Brucella suis bv. 4 str. 40]
 gi|261742699|gb|EEY30625.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686]
          Length = 396

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 18/101 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 55

Query: 57 GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
           SG V   V     DQ              + +G   V+ P
Sbjct: 56 NSGSVLTDVHYGISDQGGIRSTSSTTDLAIDGNGYFVVQGP 96



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 350 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 396


>gi|172057880|ref|YP_001814340.1| hypothetical protein Exig_1871 [Exiguobacterium sibiricum 255-15]
 gi|171990401|gb|ACB61323.1| protein of unknown function DUF1078 domain protein [Exiguobacterium
           sibiricum 255-15]
          Length = 278

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M    R + AN + I  S  ++   ++L R
Sbjct: 232 SGTLEMSNVDLSEEFTEMIIAQRGFQANTRIITTSDQILEELVNLKR 278



 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     ++ ++  NIAN  T G       Y++  ++F++++  S
Sbjct: 1  MLRSMYSGISGLKNFQTKLDVVGNNIANVNTFG-------YKKGRVTFKDLVSQS 48


>gi|294013086|ref|YP_003546546.1| flagellar hook protein FlgE [Sphingobium japonicum UT26S]
 gi|292676416|dbj|BAI97934.1| flagellar hook protein FlgE [Sphingobium japonicum UT26S]
          Length = 280

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 26/45 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  ++    R + AN + I+ ++ + TT +++
Sbjct: 234 SGALERSNVDITEELVNLISAQRNFQANSKAIEAANTLSTTIVNM 278



 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 17/70 (24%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----------EEVMH 56
          S +I+ SGL      +   + N+AN  +T        +++    F               
Sbjct: 2  SFYISLSGLKAAQTDLSTTANNVANVNSTA-------FKKSKAVFGDIFAAAPMQTTTQV 54

Query: 57 GSGGVRVKKI 66
             GVR + I
Sbjct: 55 AGQGVRTQGI 64


>gi|163750568|ref|ZP_02157806.1| flagellar basal-body rod protein FlgG [Shewanella benthica KT99]
 gi|161329723|gb|EDQ00712.1| flagellar basal-body rod protein FlgG [Shewanella benthica KT99]
          Length = 262

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A   G ++  NVNV  E  ++ ++ R+Y  N + I     M++
Sbjct: 214 AIRQGALETSNVNVTEELVNLIQSQRIYEMNSKVISAVDQMLS 256



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + A+  I+ +GL  Q   + +IS N+ANA T G       Y++    FE++++ +
Sbjct: 1  MQAALWISKTGLDAQQTNISVISNNLANASTIG-------YKKSRAVFEDLLYQT 48


>gi|90422600|ref|YP_530970.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisB18]
 gi|90104614|gb|ABD86651.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisB18]
          Length = 243

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 18/47 (38%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G V+  NV+ L E   +    R + +    I+ S   M   +  L
Sbjct: 191 QQGYVEGSNVDPLSEMTQLMTATRAFQSVSSLIESSEGTMQNAIRTL 237



 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 13/64 (20%)

Query: 4  LIASAHIANSGLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          + ++ +++   L+ Q     R++ I+ N+AN +TT        +R   + FE  +  +  
Sbjct: 1  MQSALYVS---LSAQVSLEKRLETIANNMANMKTTA-------FRADAVKFETALSRAAS 50

Query: 61 VRVK 64
            V 
Sbjct: 51 QPVA 54


>gi|294084418|ref|YP_003551176.1| hypothetical protein SAR116_0849 [Candidatus Puniceispirillum marinum
            IMCC1322]
 gi|292663991|gb|ADE39092.1| hypothetical protein SAR116_0849 [Candidatus Puniceispirillum marinum
            IMCC1322]
          Length = 1575

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 24/45 (53%)

Query: 87   SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E  ++    R Y A+ + I+ +  +  T +++
Sbjct: 1529 SGSLERSNVDITEELVNLITAQRNYQASAKAIETTTGLTQTIINI 1573


>gi|325982371|ref|YP_004294773.1| fagellar hook-basal body protein [Nitrosomonas sp. AL212]
 gi|325531890|gb|ADZ26611.1| fagellar hook-basal body protein [Nitrosomonas sp. AL212]
          Length = 423

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E   M    R+Y AN +TI+    ++ T ++L
Sbjct: 382 VESANVDLTSELVKMITAQRMYQANAKTIETQDAILQTLVNL 423



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 21/96 (21%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI----SFEEVMHGSG--------G 60
          SGL+  S  + ++  NIAN  T G       Y++        F   + G+G        G
Sbjct: 8  SGLSAASTNLDVVGNNIANVNTVG-------YKQSQAQFTDIFANSLDGAGSSRTQVGIG 60

Query: 61 VRVKKIGV--DQSTFVEEFDPGHPVANASGIVKYPN 94
           RV  +    +Q       +P     N  G  +  +
Sbjct: 61 ARVATVAQLFNQGDIAPTNNPLDIAINGQGFFRMSD 96


>gi|315654586|ref|ZP_07907492.1| flagellar hook protein FlgE [Mobiluncus curtisii ATCC 51333]
 gi|315491050|gb|EFU80669.1| flagellar hook protein FlgE [Mobiluncus curtisii ATCC 51333]
          Length = 487

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  ++  + R + AN + I  S +++   +++ R
Sbjct: 442 GAIEMSNVDLAAEFTNLILSQRGFQANSRVITTSDEILQELVNMKR 487



 Score = 40.7 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     SGL+V    + + S NIAN  TTG
Sbjct: 1  MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTG 33


>gi|311694361|gb|ADP97234.1| flagellar hook protein FlgE [marine bacterium HP15]
          Length = 632

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  ++    R Y AN +TI+ S  +  T ++L
Sbjct: 590 VEESNVDLSAELVNLIIAQRNYQANAKTIETSDAVTQTIINL 631



 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 5/67 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVR 62
          + +   SGL   S  + +   NIANA T G         D Y    +S      G  GVR
Sbjct: 2  AFNTGLSGLRAASVDLDVTGNNIANASTVGFKGSKAQFGDLYASGFLSAGTNPIGD-GVR 60

Query: 63 VKKIGVD 69
          V+ +   
Sbjct: 61 VQDVKQS 67


>gi|254519436|ref|ZP_05131492.1| flagellar hook-associated protein 1 [Clostridium sp. 7_2_43FAA]
 gi|226913185|gb|EEH98386.1| flagellar hook-associated protein 1 [Clostridium sp. 7_2_43FAA]
          Length = 611

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          M  L ++ +IA  G+ VQ   + + S NIAN+ T G +
Sbjct: 1  MSGLFSTFNIAKRGMNVQQKSIDVTSHNIANSNTVGYS 38


>gi|170725957|ref|YP_001759983.1| flagellar basal body rod protein FlgG [Shewanella woodyi ATCC
           51908]
 gi|169811304|gb|ACA85888.1| flagellar basal-body rod protein FlgG [Shewanella woodyi ATCC
           51908]
          Length = 262

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           A   G ++  NVNV  E  ++ E+ R+Y  N + I     M++
Sbjct: 214 AVRQGALETSNVNVTEELVNLIESQRIYEMNSKVISAVDQMLS 256



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 11/60 (18%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----HGSGGVRVKK 65
          I+ +GL  Q   + +IS N+ANA T G       Y++    FE+++    + +GGV    
Sbjct: 7  ISKTGLDAQQTDISVISNNVANASTVG-------YKKSRAVFEDLLYQTVNQAGGVSASN 59


>gi|120598233|ref|YP_962807.1| flagellar basal body rod protein FlgF [Shewanella sp. W3-18-1]
 gi|120558326|gb|ABM24253.1| flagellar basal-body rod protein FlgF [Shewanella sp. W3-18-1]
          Length = 247

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 79  PGHPV-ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P  P  A  SG V+  NVN + E   + E  R +   ++ +K + ++   +  L+R
Sbjct: 190 PADPNVAVESGAVEGSNVNPVDEMVSLIELQRQFEMQVKMMKTAEEIDRASSSLMR 245


>gi|94312669|ref|YP_585878.1| flagellar hook protein [Cupriavidus metallidurans CH34]
 gi|93356521|gb|ABF10609.1| flagellar hook protein [Cupriavidus metallidurans CH34]
          Length = 415

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG V+  NV++  +  ++    R Y AN QTIK    +M T ++L
Sbjct: 370 QSGSVEESNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLVNL 415



 Score = 41.8 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 10/60 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIGVD 69
          SGL   ++ + +I  NIANA T G       +++ T  F +V  GS    G RV  +   
Sbjct: 8  SGLNAAASNLDVIGNNIANANTVG-------FKQSTAQFADVYAGSKIGLGTRVNSVVQS 60


>gi|226939374|ref|YP_002794447.1| Flagellar hook protein FlgE [Laribacter hongkongensis HLHK9]
 gi|226714300|gb|ACO73438.1| Flagellar hook protein FlgE [Laribacter hongkongensis HLHK9]
          Length = 526

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y AN QTIK    ++ + + +
Sbjct: 487 SNVDLTGELVNMITAQRYYQANAQTIKVHDQVLQSLMQM 525


>gi|320538206|ref|ZP_08038101.1| fagellar hook-basal body protein [Treponema phagedenis F0421]
 gi|320145023|gb|EFW36744.1| fagellar hook-basal body protein [Treponema phagedenis F0421]
          Length = 452

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  +  DM  T R + A  +TI+ S  M+ T L+L R
Sbjct: 406 AGTLEMSNVDLTDQFTDMIITQRGFQAGAKTIQTSDTMLETVLNLKR 452



 Score = 36.8 bits (85), Expect = 0.97,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 7/40 (17%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          +     RM +I  N+AN  TTG       ++R  ++F+++
Sbjct: 1  MQNHQTRMDVIGNNVANVNTTG-------FKRGRVNFQDL 33


>gi|311033283|ref|ZP_07711373.1| flagellar basal-body rod protein [Bacillus sp. m3-13]
          Length = 273

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH-DMMTTTLDLLR 133
           + G ++  NV+     +DM    R + AN + I+     M     ++ R
Sbjct: 223 SQGHIERSNVDTAQAMSDMTAAYRAFEANQKVIQAYDMSMQKAANEIGR 271



 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++   + A +G+  Q  RM+++S N++NA T G        R
Sbjct: 1  MLRGFYTATAGMISQQRRMEMMSNNLSNANTPGYKADQGSLR 42


>gi|284989548|ref|YP_003408102.1| flagellar hook-basal body protein [Geodermatophilus obscurus DSM
          43160]
 gi|284062793|gb|ADB73731.1| flagellar hook-basal body protein [Geodermatophilus obscurus DSM
          43160]
          Length = 408

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S + A SGL     ++ +   NIAN  T G       Y+     FE+ +
Sbjct: 1  MLRSMNSAISGLRAHQTKLDVTGNNIANVNTVG-------YKASQTVFEDTL 45



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E   +    R + AN + I  S +++   ++L R
Sbjct: 362 AGALEMSNVDLAEEFTGLIVAQRGFQANSRVISSSDEVLQDLVNLKR 408


>gi|170758330|ref|YP_001787958.1| flagellar basal body rod protein FlgG [Clostridium botulinum A3
          str. Loch Maree]
 gi|169405319|gb|ACA53730.1| flagellar basal body rod protein [Clostridium botulinum A3 str.
          Loch Maree]
          Length = 263

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 7/46 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + SGL  Q  ++  IS N+AN  T G       Y+R+ +SF+E++ 
Sbjct: 8  SKSGLIAQQNKLDSISNNLANVNTVG-------YKREDVSFQELVQ 46



 Score = 41.1 bits (96), Expect = 0.058,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 5/49 (10%)

Query: 81  HPVANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  AN       G ++  NV+   E  +M  T R +  + + IK + +M
Sbjct: 206 NVFANNDVSILQGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEM 254


>gi|148380595|ref|YP_001255136.1| flagellar basal body rod protein [Clostridium botulinum A str.
          ATCC 3502]
 gi|153933262|ref|YP_001384882.1| flagellar basal body rod protein FlgG [Clostridium botulinum A
          str. ATCC 19397]
 gi|153935902|ref|YP_001388351.1| flagellar basal body rod protein FlgG [Clostridium botulinum A
          str. Hall]
 gi|168180938|ref|ZP_02615602.1| flagellar basal body rod protein [Clostridium botulinum NCTC
          2916]
 gi|148290079|emb|CAL84198.1| putative flagellar basal-body rod protein [Clostridium botulinum
          A str. ATCC 3502]
 gi|152929306|gb|ABS34806.1| flagellar basal body rod protein [Clostridium botulinum A str.
          ATCC 19397]
 gi|152931816|gb|ABS37315.1| flagellar basal body rod protein [Clostridium botulinum A str.
          Hall]
 gi|182668229|gb|EDT80208.1| flagellar basal body rod protein [Clostridium botulinum NCTC
          2916]
          Length = 263

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 7/46 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + SGL  Q  ++  IS N+AN  T G       Y+R+ +SF+E++ 
Sbjct: 8  SKSGLIAQQNKLDSISNNLANVNTVG-------YKREDVSFQELVQ 46



 Score = 40.7 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            G ++  NV+   E  +M  T R +  + + IK + +M
Sbjct: 217 QGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEM 254


>gi|319403955|emb|CBI77543.1| Flagellar basal-body rod protein flgF [Bartonella rochalimae ATCC
           BAA-1498]
 gi|319406971|emb|CBI80608.1| Flagellar basal-body rod protein flgF [Bartonella sp. 1-1C]
          Length = 244

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVN ++E   + E +R +      ++Q  +M + ++ +L
Sbjct: 195 QGYIESSNVNGVIEMTRLIEVSRAFERVESMLRQQEEMRSKSIQIL 240



 Score = 34.5 bits (79), Expect = 5.5,   Method: Composition-based stats.
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 21 RMQIISENIANARTTGDTPGS 41
          RM+ I++N+AN  T G   G 
Sbjct: 18 RMETIAQNMANVNTPGFQAGG 38


>gi|315657509|ref|ZP_07910391.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315491981|gb|EFU81590.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 484

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  ++  + R + AN + I  S +++   +++ R
Sbjct: 439 GAIEMSNVDLAAEFTNLILSQRGFQANSRVITTSDEILQELVNMKR 484



 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     SGL+V    + + S NIAN  TTG
Sbjct: 1  MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTG 33


>gi|90408060|ref|ZP_01216231.1| flagellar hook protein [Psychromonas sp. CNPT3]
 gi|90310817|gb|EAS38931.1| flagellar hook protein [Psychromonas sp. CNPT3]
          Length = 473

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NVN+  E  D+    R + AN + ++ ++ +  T L +
Sbjct: 432 EQSNVNLTTELVDLITAQRNFQANSRALEINNTLQQTILQI 472



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +IA SG++     +   + NIAN  T G
Sbjct: 2  SFNIALSGISAAQTDLDSTANNIANVNTVG 31


>gi|27464952|gb|AAN63049.1| flagellar component FlgE [Vibrio vulnificus]
          Length = 434

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +SG ++  N+++  E  D+    R + AN + ++  + +    L +
Sbjct: 388 SSGALEQSNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNILQI 433



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          ++ SGL+     +   S NIANA T G         D Y   ++         GGV+  +
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFGDVY-SNSLVTNAKTTPGGGVQANQ 62

Query: 66 IGVDQSTFVEEFDPGHPV 83
          +          +   +P+
Sbjct: 63 VAQQFHEGSSIY-TNNPM 79


>gi|27363705|ref|NP_759233.1| flagellar hook protein FlgE [Vibrio vulnificus CMCP6]
 gi|37679147|ref|NP_933756.1| flagellar hook protein FlgE [Vibrio vulnificus YJ016]
 gi|320157109|ref|YP_004189488.1| flagellar hook protein FlgE [Vibrio vulnificus MO6-24/O]
 gi|27359821|gb|AAO08760.1| Flagellar hook protein flgE [Vibrio vulnificus CMCP6]
 gi|37197889|dbj|BAC93727.1| flagellar hook protein FlgE [Vibrio vulnificus YJ016]
 gi|319932421|gb|ADV87285.1| flagellar hook protein FlgE [Vibrio vulnificus MO6-24/O]
          Length = 434

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +SG ++  N+++  E  D+    R + AN + ++  + +    L +
Sbjct: 388 SSGALEQSNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNILQI 433



 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          ++ SGL+     +   S NIANA T G         D Y   ++         GGV+  +
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFGDVY-SNSLFTNAKTTPGGGVQANQ 62

Query: 66 IGVDQSTFVEEFDPGHPV 83
          +          +   +P+
Sbjct: 63 VAQQFHEGSSIY-TNNPM 79


>gi|254698190|ref|ZP_05160018.1| flagellar hook protein FlgE [Brucella abortus bv. 2 str. 86/8/59]
 gi|260762637|ref|ZP_05874969.1| flagellar hook protein flgE [Brucella abortus bv. 2 str. 86/8/59]
 gi|260673058|gb|EEX59879.1| flagellar hook protein flgE [Brucella abortus bv. 2 str. 86/8/59]
          Length = 396

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F  +        +
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQY 55

Query: 57 GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
           SG V   V+    DQ              + +G   V+ P
Sbjct: 56 NSGSVLTDVRYGISDQGGIRSTSSTTDLTIDGNGYFVVQGP 96



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 350 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNLKR 396


>gi|168186143|ref|ZP_02620778.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str.
           Eklund]
 gi|169295828|gb|EDS77961.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str.
           Eklund]
          Length = 257

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G  +  NV++  E AD+  T R +  N   +K + +M     +L
Sbjct: 210 QGFTEQSNVDLGKEMADLIITQRAFQLNSSALKTADEMWGMANNL 254



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 24/85 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          ++ S   + SG++ +  ++  IS N+ANA T G       Y++  + F ++M  +     
Sbjct: 1  MLRSIWNSRSGMSAEMEKLNAISNNMANATTVG-------YKKVDVQFNDLMQENLDRYG 53

Query: 59 ------------GGVRVKKIGVDQS 71
                       GVR  ++  D +
Sbjct: 54 YPVSKGNPQFTGTGVRTTELERDNA 78


>gi|297182937|gb|ADI19086.1| flagellar basal body rod protein [uncultured delta proteobacterium
           HF0070_15B21]
          Length = 258

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            GI++  NVN ++E + M    R Y    + I     +    + + R
Sbjct: 210 QGILEQSNVNTVLEMSRMITATRSYEMVQKAITNLDSLDEKAITISR 256


>gi|307293787|ref|ZP_07573631.1| fagellar hook-basal body protein [Sphingobium chlorophenolicum L-1]
 gi|306879938|gb|EFN11155.1| fagellar hook-basal body protein [Sphingobium chlorophenolicum L-1]
          Length = 280

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 26/45 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  ++    R + AN + I+ ++ + TT +++
Sbjct: 234 SGALERSNVDITEELVNLISAQRNFQANSKAIEAANTLSTTIVNM 278



 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 17/70 (24%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----------EEVMH 56
          S +I+ SGL      +   + N+AN  +T        +++    F               
Sbjct: 2  SFYISLSGLKAAQTDLSTTANNVANVNSTA-------FKKSKAVFGDIFAAAPMQTTTQV 54

Query: 57 GSGGVRVKKI 66
             GVR + I
Sbjct: 55 AGQGVRTQGI 64


>gi|218778868|ref|YP_002430186.1| hypothetical protein Dalk_1015 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760252|gb|ACL02718.1| Flagellar hook protein FlgE [Desulfatibacillum alkenivorans AK-01]
          Length = 693

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M  T R Y AN + I  +  ++   ++L R
Sbjct: 651 EQSNVDLANEFVKMITTQRGYQANSKVITVTDQLLQEVINLKR 693


>gi|2494530|sp|Q56326|FLGE_TREPH RecName: Full=Flagellar hook protein flgE
 gi|439981|gb|AAA73467.1| flagellar hook polypeptide [Treponema phagedenis]
          Length = 463

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  +  DM  T R + A  +TI+ S  M+ T L+L R
Sbjct: 417 AGTLEMSNVDLTDQFTDMIITQRGFQAGAKTIQTSDTMLETVLNLKR 463



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 11/54 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L +      SG+     RM +I  N+AN  TTG       ++R  ++F+++
Sbjct: 2  MRSLFSGV----SGMQNHQTRMDVIGNNVANVNTTG-------FKRGRVNFQDL 44


>gi|290474972|ref|YP_003467856.1| flagellar hook protein [Xenorhabdus bovienii SS-2004]
 gi|289174289|emb|CBJ81079.1| flagellar biosynthesis; hook protein [Xenorhabdus bovienii SS-2004]
          Length = 416

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T + +
Sbjct: 371 SGALEASNVDMSQELVNMIVAQRNYQSNAQTIKTQDQILQTLVSM 415



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   ++ + +I  NIAN+ T G       ++  + +F +V  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAASNLDVIGNNIANSATFG-------FKSSSAAFADVFSGSDVGLGVKV 54

Query: 64 KKIGV 68
            +  
Sbjct: 55 SGMVK 59


>gi|218681813|ref|ZP_03529560.1| flagellar hook protein FlgE [Rhizobium etli CIAT 894]
          Length = 400

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 353 KSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 400


>gi|332525066|ref|ZP_08401246.1| flagellar basal body and hook protein [Rubrivivax benzoatilyticus
           JA2]
 gi|332108355|gb|EGJ09579.1| flagellar basal body and hook protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 432

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 26/46 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +G ++  N+++  E  +M    R+Y AN QTIK    +M T +++
Sbjct: 386 QAGALEESNIDLTGELVNMITAQRIYQANAQTIKTQDQVMQTLVNM 431



 Score = 38.8 bits (90), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 12/79 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          S     SGL   S  + +I  NIANA T          SD Y          ++G+ GV 
Sbjct: 2  SFQQGLSGLNATSKSLDVIGNNIANANTYGAKVSRAEFSDMY-------ATALNGA-GVN 53

Query: 63 VKKIGVDQSTFVEEFDPGH 81
             IGV      ++F  G+
Sbjct: 54 NVGIGVTLGAVSQQFTQGN 72


>gi|237751360|ref|ZP_04581840.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
 gi|229372726|gb|EEO23117.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
          Length = 600

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NV+V     ++    R Y  N +    S D++   ++L R
Sbjct: 553 QGYVETSNVDVADALTNLILMQRGYSMNAKAFTTSDDLIKEAINLKR 599



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A SG+      +  IS NIAN  T G       Y+     F+ +   S
Sbjct: 8  AVSGIKTHQFGLDSISNNIANVNTVG-------YKANDPEFKTLFSRS 48


>gi|110632640|ref|YP_672848.1| flagellar hook protein FlgE [Mesorhizobium sp. BNC1]
 gi|110283624|gb|ABG61683.1| flagellar basal body FlaE [Chelativorans sp. BNC1]
          Length = 422

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ASG ++  NV++  E   M E+ R Y AN +  +   D+M   ++L R
Sbjct: 375 ASGALESSNVDIAEELTSMIESQRSYTANSKVFQTGSDLMELLVNLKR 422



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 14/65 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          L        SG+  Q+ R+  +++NIAN+ T G       Y+R T  F  ++       +
Sbjct: 3  LYGMMKTGVSGMNAQANRLSTVADNIANSSTNG-------YKRATTEFSTLVVPGTQGSY 55

Query: 57 GSGGV 61
           SGGV
Sbjct: 56 NSGGV 60


>gi|188588515|ref|YP_001920211.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498796|gb|ACD51932.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 364

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A+ + I  + +++ T   L+R
Sbjct: 318 QGALEASNVDLTEQFTDMITATRAFQASSKMISTADEILQTITGLMR 364



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S +   SG+     ++ +I  NIAN  TTG
Sbjct: 1  MLRSMYSGISGMKANQVKLDVIGNNIANVSTTG 33


>gi|238751762|ref|ZP_04613250.1| Flagellar hook protein FlgE [Yersinia rohdei ATCC 43380]
 gi|238710033|gb|EEQ02263.1| Flagellar hook protein FlgE [Yersinia rohdei ATCC 43380]
          Length = 430

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 385 SGALESSNVDLSAELVNMIVAQRNYQSNAQTIKTQDQILQTLVNL 429



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS    GV+V  I 
Sbjct: 6  AVSGLNAASSNLDVIGNNIANSATSG-------FKSSSVSFADMFAGSQAGMGVQVAGIT 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|298345998|ref|YP_003718685.1| flagellar basal body and hook protein [Mobiluncus curtisii ATCC
           43063]
 gi|304390244|ref|ZP_07372198.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|298236059|gb|ADI67191.1| flagellar basal body and hook protein [Mobiluncus curtisii ATCC
           43063]
 gi|304326726|gb|EFL93970.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 484

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  ++  + R + AN + I  S +++   +++ R
Sbjct: 439 GAIEMSNVDLAAEFTNLILSQRGFQANSRVITTSDEILQELVNMKR 484



 Score = 40.7 bits (95), Expect = 0.072,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     SGL+V    + + S NIAN  TTG
Sbjct: 1  MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTG 33


>gi|163744346|ref|ZP_02151706.1| flagellar hook protein FlgE [Oceanibulbus indolifex HEL-45]
 gi|161381164|gb|EDQ05573.1| flagellar hook protein FlgE [Oceanibulbus indolifex HEL-45]
          Length = 422

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 10/66 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++  I  SGL   S+R+Q IS NIANA T G       YRR   +F E +  + G   
Sbjct: 3  ITSALQIGVSGLQANSSRVQNISSNIANANTVG-------YRR---TFSEFVTQNTGSTQ 52

Query: 64 KKIGVD 69
            +  D
Sbjct: 53 AGVLTD 58



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 5/59 (8%)

Query: 80  GHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G+P+ N  G +     +  NV++  E  D+ +T R Y ++ + I  S +M++ TL++ R
Sbjct: 364 GNPMLNGLGSINSNALEGSNVDIAQELTDLIQTQRAYSSSAKIITTSDEMLSETLNIKR 422


>gi|86146155|ref|ZP_01064481.1| flagellar hook protein [Vibrio sp. MED222]
 gi|218708804|ref|YP_002416425.1| flagellar hook protein FlgE [Vibrio splendidus LGP32]
 gi|85836102|gb|EAQ54234.1| flagellar hook protein [Vibrio sp. MED222]
 gi|218321823|emb|CAV17792.1| Flagellar hook protein flgE [Vibrio splendidus LGP32]
          Length = 434

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  N+++  E  D+    R + AN ++++  + +    L +
Sbjct: 389 NGSLEQSNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQI 433



 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 6/78 (7%)

Query: 10 IANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          ++ SGL+     +   S NIANA T           D Y     +  +   G GG +  +
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSSSLFTNAKTTPG-GGAQASQ 62

Query: 66 IGVDQSTFVEEFDPGHPV 83
          +          +   +P+
Sbjct: 63 VAQQFHEGSSIY-TNNPM 79


>gi|187935288|ref|YP_001885050.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund
           17B]
 gi|187723441|gb|ACD24662.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund
           17B]
          Length = 364

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A+ + I  + +++ T   L+R
Sbjct: 318 QGALEASNVDLTEQFTDMITATRAFQASSKMISTADEILQTITGLMR 364



 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S +   SG+     ++ +I  NIAN  TTG
Sbjct: 1  MLRSMYSGISGMKSNQVKLDVIGNNIANVSTTG 33


>gi|323492338|ref|ZP_08097491.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546]
 gi|323313385|gb|EGA66496.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546]
          Length = 398

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G       ++     F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYG-------FKGARTEFAAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56



 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NV++  E  ++    R Y AN +TI  +  +    
Sbjct: 354 GALEGSNVDLTSELVNLMTAQRNYQANAKTISTNDKLTQAL 394


>gi|254227983|ref|ZP_04921413.1| Flagellar hook protein FlgE [Vibrio sp. Ex25]
 gi|262396035|ref|YP_003287888.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
 gi|151939479|gb|EDN58307.1| Flagellar hook protein FlgE [Vibrio sp. Ex25]
 gi|262339629|gb|ACY53423.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
          Length = 398

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G   G          F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGG-------RTEFSAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NV++  E   +    R Y AN +TI  S  +    
Sbjct: 354 GALEGSNVDLTSELVALMTAQRNYQANAKTISTSDKLTQAL 394


>gi|194014627|ref|ZP_03053244.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Bacillus pumilus ATCC 7061]
 gi|194013653|gb|EDW23218.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Bacillus pumilus ATCC 7061]
          Length = 263

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 8/63 (12%)

Query: 79  PGHPVANAS--------GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           P +P+            G ++  NV++  E  +M    R + +N +TI  S +++   ++
Sbjct: 201 PSNPIVPGEQGTGIIQTGRLEMSNVDLTDEFTEMIIAQRGFQSNAKTITTSDEILQELVN 260

Query: 131 LLR 133
           L R
Sbjct: 261 LKR 263


>gi|327393471|dbj|BAK10893.1| flagellar hook protein FlgE [Pantoea ananatis AJ13355]
          Length = 415

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y AN QTIK    ++ T ++L
Sbjct: 370 AGALESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQILNTLVNL 414



 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   S+ + +I  NIAN+ T G       ++  TI+F ++  GS    G +V
Sbjct: 2  SFSQAVSGLGAASSNLDVIGNNIANSATAG-------FKSSTIAFADMFAGSNVGLGTKV 54

Query: 64 KKIGV 68
            +  
Sbjct: 55 AAVIQ 59


>gi|292489133|ref|YP_003532020.1| flagellar hook protein FlgE [Erwinia amylovora CFBP1430]
 gi|292900252|ref|YP_003539621.1| flagellar hook protein [Erwinia amylovora ATCC 49946]
 gi|291200100|emb|CBJ47226.1| flagellar hook protein [Erwinia amylovora ATCC 49946]
 gi|291554567|emb|CBA22181.1| Flagellar hook protein flgE [Erwinia amylovora CFBP1430]
 gi|312173291|emb|CBX81546.1| Flagellar hook protein flgE [Erwinia amylovora ATCC BAA-2158]
          Length = 410

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK   +M+ T ++L
Sbjct: 371 SNVDLGSEMVNMIVYQRNYQSNSQTIKTQSEMLQTLVNL 409



 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 7/58 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          SGL   ++ + ++  NIAN++T G   GS       I F ++  G+ G+ V+  G  Q
Sbjct: 8  SGLNAAASALDVVGNNIANSQTFGFKSGS-------IGFADIFAGAQGMGVQVAGSGQ 58


>gi|291280521|ref|YP_003497356.1| flagellar basal-body rod protein FlgG [Deferribacter
          desulfuricans SSM1]
 gi|290755223|dbj|BAI81600.1| flagellar basal-body rod protein FlgG [Deferribacter
          desulfuricans SSM1]
          Length = 254

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          ++   + A SG+  Q+ +++IIS N+AN  TT        Y+R+   F + ++
Sbjct: 1  MLNGLYTATSGMLAQNRKLEIISNNLANINTTS-------YKREDAIFRDYLY 46



 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            G ++  NVN + E   M E+ R +    + I+   ++ +  + D+ R
Sbjct: 205 QGYLEGSNVNPVKEMVSMIESMRGFETYQKVIQTIDEINSKSSNDIGR 252


>gi|251780952|ref|ZP_04823872.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243085267|gb|EES51157.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 364

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A+ + I  + +++ T   L+R
Sbjct: 318 QGALEASNVDLTEQFTDMITATRAFQASSKMISTADEILQTITGLMR 364



 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S +   SG+     ++ +I  NIAN  TTG
Sbjct: 1  MLRSMYSGISGMKANQVKLDVIGNNIANVSTTG 33


>gi|308071138|ref|YP_003872743.1| flagellar basal body rod protein [Paenibacillus polymyxa E681]
 gi|305860417|gb|ADM72205.1| Flagellar basal body rod protein [Paenibacillus polymyxa E681]
          Length = 275

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  DM +  R+Y    + +  S  MM    +L
Sbjct: 229 SGYLEESNVDLAGEMTDMMQVQRMYQMAARALTSSDTMMNLANNL 273



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 7/36 (19%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
           R+ +I++NIAN  T G       Y+ K  SFE+V+
Sbjct: 17 QRLDLIADNIANINTVG-------YKSKQGSFEDVL 45


>gi|300312833|ref|YP_003776925.1| flagellar hook protein [Herbaspirillum seropedicae SmR1]
 gi|300075618|gb|ADJ65017.1| flagellar hook protein [Herbaspirillum seropedicae SmR1]
          Length = 420

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  +M    R+Y AN QTIK    ++ T + L
Sbjct: 378 VEQSNVDLTAELVNMIVAQRVYQANSQTIKVQDTVLQTLVSL 419


>gi|291617020|ref|YP_003519762.1| FlgE [Pantoea ananatis LMG 20103]
 gi|291152050|gb|ADD76634.1| FlgE [Pantoea ananatis LMG 20103]
          Length = 415

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y AN QTIK    ++ T ++L
Sbjct: 370 AGALESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQILNTLVNL 414



 Score = 37.2 bits (86), Expect = 0.80,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   S+ + +I  NIAN+ T G       ++  TI+F ++  GS    G +V
Sbjct: 2  SFSQAVSGLGAASSNLDVIGNNIANSATAG-------FKSSTIAFADMFAGSNVGLGTKV 54

Query: 64 KKIGV 68
            +  
Sbjct: 55 AAVIQ 59


>gi|288573021|ref|ZP_06391378.1| protein of unknown function DUF1078 domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288568762|gb|EFC90319.1| protein of unknown function DUF1078 domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 875

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +Y NV++  E  D+  T R + A+ + I  S  ++   L+L R
Sbjct: 833 EYSNVDITEEFTDLITTQRGFQASARVITTSDSVLEELLNLKR 875



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 18/75 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          ++ S     SG      R+ ++  NIAN  T G       +++ T+ F++++  +     
Sbjct: 1  MLRSLLTGVSGAKAHQKRLDVVGNNIANVNTVG-------FKKSTVVFQDLLSQTERGAM 53

Query: 59 ------GGVRVKKIG 67
                GGV  K++G
Sbjct: 54 APDGNVGGVNAKQVG 68


>gi|259907634|ref|YP_002647990.1| Flagellar hook protein FlgE [Erwinia pyrifoliae Ep1/96]
 gi|224963256|emb|CAX54740.1| Flagellar hook protein FlgE [Erwinia pyrifoliae Ep1/96]
 gi|283477476|emb|CAY73392.1| flgE [Erwinia pyrifoliae DSM 12163]
          Length = 410

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK   +M+ T ++L
Sbjct: 371 SNVDLGSEMVNMIVYQRNYQSNSQTIKTQSEMLQTLVNL 409



 Score = 37.2 bits (86), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 7/58 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          SGL   ++ + ++  NIAN++T G       ++  +I F ++  G+ G+ V+  G  Q
Sbjct: 8  SGLNAAASALDVVGNNIANSQTFG-------FKAGSIGFADIFAGAQGMGVQVAGSSQ 58


>gi|86157813|ref|YP_464598.1| hypothetical protein Adeh_1387 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774324|gb|ABC81161.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 428

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  +   +    R + AN +TI  +  +++  + + R
Sbjct: 382 AGSLEQSNVDLAEQFVRLIAAQRAFQANSKTITTADQLLSELIAMKR 428



 Score = 36.8 bits (85), Expect = 0.96,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          L+ +     +GL   S  + ++ +NIANA T G   G   +  +    + V+ GSG V
Sbjct: 3  LLTALSSGTTGLQASSLELSVVGDNIANANTVGFKSGRAAF--EDALSQTVIGGSGQV 58


>gi|85712255|ref|ZP_01043306.1| Flagella basal body rod protein [Idiomarina baltica OS145]
 gi|85693882|gb|EAQ31829.1| Flagella basal body rod protein [Idiomarina baltica OS145]
          Length = 247

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 83  VANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +A+A+     G ++  NVN + E   M    R Y  N++ +K + +    +  L+R
Sbjct: 190 LADANVKLEVGALEGSNVNAIGEMTSMIALQRQYEMNVKMMKTADENAQRSATLMR 245


>gi|256376465|ref|YP_003100125.1| hypothetical protein Amir_2339 [Actinosynnema mirum DSM 43827]
 gi|255920768|gb|ACU36279.1| protein of unknown function DUF1078 domain protein [Actinosynnema
           mirum DSM 43827]
          Length = 276

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  ++    R + AN + I  S +++   ++L R
Sbjct: 230 SGALEMSNVDLSQEFTNLIIAQRGFQANSKVITSSDEILQDLMNLKR 276



 Score = 37.2 bits (86), Expect = 0.82,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 11/55 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L +      SGL      M +   NI+N  TTG       ++     FE+ +  +
Sbjct: 5  LFSGI----SGLRAHQQMMDVTGNNISNVNTTG-------FKSSQTVFEDTLSQT 48


>gi|196249721|ref|ZP_03148417.1| protein of unknown function DUF1078 domain protein [Geobacillus
          sp. G11MC16]
 gi|196210597|gb|EDY05360.1| protein of unknown function DUF1078 domain protein [Geobacillus
          sp. G11MC16]
          Length = 273

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 11/69 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S H A + +     R+  +S NIAN+ TTG       ++R+  SF E++      +V
Sbjct: 1  MLRSMHTAANTMNALQQRLDTLSHNIANSNTTG-------FKRREASFAELLTQ----QV 49

Query: 64 KKIGVDQST 72
            +  D++ 
Sbjct: 50 DHLPDDEAP 58



 Score = 41.5 bits (97), Expect = 0.043,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           A   G ++  NV++  E   +  T R Y  N + I  S  M+
Sbjct: 223 AMKQGALEQSNVDLGEELIGLMATTRAYQLNARAISISEQML 264


>gi|283784085|ref|YP_003363950.1| lateral flagellar hook protein [Citrobacter rodentium ICC168]
 gi|282947539|emb|CBG87091.1| lateral flagellar hook protein [Citrobacter rodentium ICC168]
          Length = 400

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGMLESSNVDITTELVELMTAQRNYQANTKVISTSTQL 392



 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +   S  + V   
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTDFSAMYADSQAMGVSVA 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTAQS 59


>gi|206603526|gb|EDZ40006.1| Putative flagellar basal body rod protein [Leptospirillum sp. Group
           II '5-way CG']
          Length = 267

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 82  PVANAS---GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           PVA+     G  +  NVN   E   M E  R +  +L+ ++  +++   T++
Sbjct: 210 PVADPDVLAGGFESSNVNGTFEMVRMIEAMRSFETHLKALQTLNELTRRTVN 261



 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 7/43 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          SG   Q   M +++ N+AN  T G       ++R  ++F   +
Sbjct: 10 SGAQAQEQLMDVLTNNLANVNTPG-------FKRDRVTFRTYL 45


>gi|114567879|ref|YP_755033.1| flagellar basal-body rod protein (flgG-2) [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|114338814|gb|ABI69662.1| flagellar basal-body rod protein (flgG-2) [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 246

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E   +    R Y +  + ++   ++M   +D
Sbjct: 197 QGYIEQSNVNAVKEMVTLISVVRAYESLQKMVQAEDEIMGQAID 240


>gi|332531618|ref|ZP_08407515.1| flagellar hook protein FlgE [Hylemonella gracilis ATCC 19624]
 gi|332038981|gb|EGI75410.1| flagellar hook protein FlgE [Hylemonella gracilis ATCC 19624]
          Length = 512

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  +V++  E  +M    R Y AN QTIK    +M T +++
Sbjct: 467 SGALEESSVDLTKELVNMMTAQRTYQANAQTIKTQDQVMQTLVNM 511



 Score = 43.0 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          SGL   S  + +I  NIANA TTG   G   +      F   + G+ G     IGV+ ST
Sbjct: 8  SGLNASSRSLDVIGNNIANANTTGFKSGRAEF---GDVFASSI-GASGAGTIGIGVEVST 63

Query: 73 FVEEFDPGH 81
            ++F  G+
Sbjct: 64 VSQQFTQGN 72


>gi|308068661|ref|YP_003870266.1| flagellar basal-body rod protein flgG (Distal rod protein)
           [Paenibacillus polymyxa E681]
 gi|305857940|gb|ADM69728.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Paenibacillus polymyxa E681]
          Length = 272

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  +G ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 223 AIVAGQLEMSNVDLTGEFTEMIVAQRGFQANSRIITTSDEVLQEVVNLKR 272



 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 18/75 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          ++ S +   SG+     ++ +I  NIAN  TTG       ++   + F++++        
Sbjct: 1  MLRSMYSGVSGMKGFQTKLDVIGNNIANVNTTG-------FKSSRVMFKDILSQTSSGAS 53

Query: 56 ---HGSGGVRVKKIG 67
               +GG+  K++G
Sbjct: 54 APGDAAGGINAKQVG 68


>gi|296531742|ref|ZP_06894567.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
 gi|296267925|gb|EFH13727.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
          Length = 506

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  ++ ET R Y +N   ++ +  M+    +L R
Sbjct: 461 GALESSNVDIGTELTNLIETQRAYSSNATVVRTADQMLEEATNLKR 506



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 8/56 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-VMHGSG 59
          I +   + SGL  Q+ ++  IS NIAN+ T G       Y+R    FE  V+ GS 
Sbjct: 4  INALRTSTSGLNAQAVKLSGISNNIANSSTVG-------YKRVDTQFESLVLEGSS 52


>gi|295678058|ref|YP_003606582.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
 gi|295437901|gb|ADG17071.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
          Length = 510

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G V+  NV++  E  ++    R Y AN QTIK    +  T ++L
Sbjct: 467 GAVENSNVDLTSELVNLITAQRNYQANAQTIKTQQAVDQTLINL 510


>gi|291288380|ref|YP_003505196.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885540|gb|ADD69240.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
          Length = 252

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +G ++  NVN + E   M E +R +    + I    ++ +  ++
Sbjct: 203 TGYLEGSNVNPVEEMVKMIEASRGFETYSKIITTFDEIDSKAVN 246



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/33 (48%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I   + A SG+A+Q  RM IIS N+AN  T G
Sbjct: 1  MINGLYTATSGMAMQQRRMDIISSNLANLNTVG 33


>gi|200390428|ref|ZP_03217039.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|199602873|gb|EDZ01419.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
          Length = 403

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 358 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 402



 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|304397204|ref|ZP_07379083.1| fagellar hook-basal body protein [Pantoea sp. aB]
 gi|304355353|gb|EFM19721.1| fagellar hook-basal body protein [Pantoea sp. aB]
          Length = 418

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y AN QTIK    ++ T ++L
Sbjct: 373 AGALESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQILNTLVNL 417



 Score = 37.2 bits (86), Expect = 0.84,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   S+ + +I  NIAN+ T G       ++  TI+F ++  GS    G +V
Sbjct: 2  SFSQAVSGLGAASSNLDVIGNNIANSATAG-------FKSSTIAFADMFAGSNVGLGTKV 54

Query: 64 KKIGV 68
            +  
Sbjct: 55 AAVIQ 59


>gi|209521589|ref|ZP_03270287.1| flagellar basal body FlaE domain protein [Burkholderia sp. H160]
 gi|209497972|gb|EDZ98129.1| flagellar basal body FlaE domain protein [Burkholderia sp. H160]
          Length = 502

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G V+  NV++  E  ++    R Y AN QTIK    +  T ++L
Sbjct: 459 GAVENSNVDLTSELVNLITAQRNYQANAQTIKTQQAVDQTLINL 502



 Score = 33.4 bits (76), Expect = 9.9,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 5/78 (6%)

Query: 22 MQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSGGVRVKKIGV--DQSTFVEE 76
          + +I  NIANA T G   G+  +      +++         G ++ ++     Q T    
Sbjct: 17 LDVIGNNIANANTVGFKSGTAEFADMYANSVATATSQQIGIGTQLSEVQQQFSQGTITTT 76

Query: 77 FDPGHPVANASGIVKYPN 94
              +   N +G  +  N
Sbjct: 77 NQALNVAINGNGFFQMSN 94


>gi|225375330|ref|ZP_03752551.1| hypothetical protein ROSEINA2194_00955 [Roseburia inulinivorans
          DSM 16841]
 gi|225212819|gb|EEG95173.1| hypothetical protein ROSEINA2194_00955 [Roseburia inulinivorans
          DSM 16841]
          Length = 550

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 20/77 (25%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
          ++ S + A SGL     RM +I  NIAN  T         ++  +++F ++++       
Sbjct: 1  MMRSMYSAVSGLKTHQTRMDVIGNNIANVNTVA-------FKSSSVTFSDILYQTTSNAS 53

Query: 57 ------GSGGVRVKKIG 67
                G+GGV  K+IG
Sbjct: 54 GANATTGTGGVNAKQIG 70



 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E   M  T R + AN + I  S  ++   ++L R
Sbjct: 504 TGELEMSNVDLSSEFTSMITTQRGFQANSRVITTSDTLLEELVNLKR 550


>gi|297585403|ref|YP_003701183.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
 gi|297143860|gb|ADI00618.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
          Length = 277

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  NV+       M    R + AN + ++     +   + D+ R
Sbjct: 227 QQGYLERSNVDAGQTMTQMMAALRNFEANQKVLQAYDQSLERAVNDIGR 275


>gi|242277989|ref|YP_002990118.1| hypothetical protein Desal_0512 [Desulfovibrio salexigens DSM 2638]
 gi|242120883|gb|ACS78579.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 529

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV+V  E   +  T R + AN + I  +  ++   + L R
Sbjct: 487 EQSNVDVGDEMVKLITTQRGFQANSKAITTADQLLGELIQLKR 529


>gi|310764860|gb|ADP09810.1| Flagellar hook protein FlgE [Erwinia sp. Ejp617]
          Length = 410

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK   +M+ T ++L
Sbjct: 371 SNVDLGSEMVNMIVYQRNYQSNSQTIKTQSEMLQTLVNL 409



 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 7/58 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          SGL   ++ + ++  NIAN++T G       ++  +I F ++  G+ G+ V+  G  Q
Sbjct: 8  SGLNAAASALDVVGNNIANSQTFG-------FKAGSIGFADIFAGAQGMGVQVAGSSQ 58


>gi|148976394|ref|ZP_01813100.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
 gi|145964217|gb|EDK29473.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
          Length = 434

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  N+++  E  D+    R + AN ++++  + +    L +
Sbjct: 389 NGSLEQSNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQI 433



 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 10 IANSGLAVQSARMQIISENIANART 34
          +A SGL+     +   S NIANA T
Sbjct: 4  VALSGLSAAQLDLNTTSNNIANANT 28


>gi|123442784|ref|YP_001006761.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332161322|ref|YP_004297899.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|122089745|emb|CAL12598.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318605242|emb|CBY26740.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325665552|gb|ADZ42196.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860606|emb|CBX70903.1| flagellar hook protein flgE [Yersinia enterocolitica W22703]
          Length = 419

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 374 SGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVNL 418



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS    GV+V  I 
Sbjct: 6  AVSGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGIT 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|324113871|gb|EGC07845.1| fagellar hook-basal body protein [Escherichia fergusonii B253]
 gi|325497616|gb|EGC95475.1| flagellar hook protein FlgE [Escherichia fergusonii ECD227]
          Length = 401

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.1 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|297183504|gb|ADI19634.1| flagellar hook protein flge [uncultured delta proteobacterium
           HF0770_45N15]
          Length = 494

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 27/45 (60%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +++  NV++ +E   M E+ R + AN +T+  S +M+   +++ R
Sbjct: 450 MLEQSNVDLSLEFVKMIESQRAFQANAKTVTTSDEMIVDLVNMKR 494


>gi|281306984|pdb|3A69|A Chain A, Atomic Model Of The Bacterial Flagellar Hook Based On
           Docking An X-Ray Derived Structure And Terminal Two
           Alpha- Helices Into An 7.1 Angstrom Resolution Cryoem
           Map
          Length = 402

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 1  SFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 53

Query: 64 KKIGVD 69
            I  D
Sbjct: 54 AGITQD 59


>gi|238758110|ref|ZP_04619290.1| Flagellar hook protein FlgE [Yersinia aldovae ATCC 35236]
 gi|238703648|gb|EEP96185.1| Flagellar hook protein FlgE [Yersinia aldovae ATCC 35236]
          Length = 428

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 383 SGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVNL 427



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS    GV+V  I 
Sbjct: 6  AVSGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGIT 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|237731007|ref|ZP_04561488.1| flagellar hook protein FlgE [Citrobacter sp. 30_2]
 gi|226906546|gb|EEH92464.1| flagellar hook protein FlgE [Citrobacter sp. 30_2]
          Length = 417

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 372 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 416



 Score = 41.1 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|218509412|ref|ZP_03507290.1| flagellar hook protein FlgE [Rhizobium etli Brasil 5]
          Length = 196

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 149 KSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 196


>gi|127512280|ref|YP_001093477.1| flagellar basal body rod protein FlgF [Shewanella loihica PV-4]
 gi|126637575|gb|ABO23218.1| flagellar basal-body rod protein FlgF [Shewanella loihica PV-4]
          Length = 247

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 79  PGHPV-ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P  P  A  SG ++  NVN + E   + +  R +   ++ +K + +M   +  L+R
Sbjct: 190 PADPNVAVESGAIEGSNVNAVDEMVSLIDLQRQFEMQVKMMKTAEEMDQASSSLMR 245


>gi|323967017|gb|EGB62443.1| fagellar hook-basal body protein [Escherichia coli M863]
 gi|327253475|gb|EGE65113.1| flagellar hook protein flgE [Escherichia coli STEC_7v]
          Length = 401

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.5 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|168234103|ref|ZP_02659161.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194468943|ref|ZP_03074927.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194455307|gb|EDX44146.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205331935|gb|EDZ18699.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 425

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 380 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 424



 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|15887919|ref|NP_353600.1| flagellar hook protein FlgE [Agrobacterium tumefaciens str. C58]
 gi|15155515|gb|AAK86385.1| flagellar hook protein [Agrobacterium tumefaciens str. C58]
          Length = 425

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 14/72 (19%)

Query: 76  EFDPGH---------PVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            + P +         P + + G +     +  NV++  E  DM E+ R+Y AN +  +  
Sbjct: 354 VYLPSNDSGVVTIGFPQSGSFGYIQKGALEGSNVDIASELTDMIESQRIYTANSKVFQTG 413

Query: 122 HDMMTTTLDLLR 133
            D+M   ++L R
Sbjct: 414 SDLMDVLINLKR 425



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          +  +     SG+  Q+ ++  + +NIANA TTG       Y+R + SF  +
Sbjct: 3  IFGTMRTGVSGMNAQANKLGTVGDNIANASTTG-------YKRASTSFSSL 46


>gi|57505769|ref|ZP_00371695.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
 gi|57016042|gb|EAL52830.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
          Length = 545

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 26/44 (59%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G ++  NVN+ +E +++  T R + A+ ++I  S  M+   +++
Sbjct: 500 GFLEQSNVNLSMELSNLIVTQRAFDASSKSITTSDQMIQKAINM 543


>gi|322616547|gb|EFY13456.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322620512|gb|EFY17376.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622506|gb|EFY19351.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322629657|gb|EFY26432.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632623|gb|EFY29369.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636882|gb|EFY33585.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641580|gb|EFY38218.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644070|gb|EFY40616.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650030|gb|EFY46448.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653955|gb|EFY50278.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658487|gb|EFY54749.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322663345|gb|EFY59547.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322670079|gb|EFY66219.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674857|gb|EFY70948.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676673|gb|EFY72740.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682595|gb|EFY78614.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686652|gb|EFY82631.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195766|gb|EFZ80942.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198342|gb|EFZ83446.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323203174|gb|EFZ88204.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323209177|gb|EFZ94114.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323209681|gb|EFZ94610.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217863|gb|EGA02578.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222151|gb|EGA06535.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224923|gb|EGA09181.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229665|gb|EGA13788.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323232890|gb|EGA16986.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240625|gb|EGA24667.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242939|gb|EGA26960.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323250256|gb|EGA34145.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252631|gb|EGA36469.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258841|gb|EGA42494.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323261030|gb|EGA44623.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266939|gb|EGA50424.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269980|gb|EGA53429.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 403

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 358 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 402



 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|317050614|ref|YP_004111730.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5]
 gi|316945698|gb|ADU65174.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5]
          Length = 259

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN++ E  DM E NR + A  + I    + ++T L   +
Sbjct: 211 QGYLESSNVNIVREMTDMVELNRSFSAYQKMISSIDETVSTLLQAGK 257



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++   + + SG+ +QS ++   + N+AN  T G
Sbjct: 1  MVNGLYTSASGMVLQSRKLDASANNLANVNTVG 33


>gi|257457611|ref|ZP_05622778.1| flagellar hook protein FlgE [Treponema vincentii ATCC 35580]
 gi|257444997|gb|EEV20073.1| flagellar hook protein FlgE [Treponema vincentii ATCC 35580]
          Length = 463

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  +  DM  T R + A  +TI+ S  M+ T L+L R
Sbjct: 417 AGTLEMSNVDLTDQFTDMIITQRGFQAGAKTIQTSDTMLETVLNLKR 463



 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 11/54 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L +      SG+     RM +I  NIAN  TTG       ++R  ++F+++
Sbjct: 2  MRSLFSGV----SGMQNHQTRMDVIGNNIANVNTTG-------FKRGRVNFQDL 44


>gi|238764392|ref|ZP_04625342.1| Flagellar hook protein FlgE [Yersinia kristensenii ATCC 33638]
 gi|238697418|gb|EEP90185.1| Flagellar hook protein FlgE [Yersinia kristensenii ATCC 33638]
          Length = 437

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 392 SGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVNL 436



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS    GV+V  I 
Sbjct: 6  AVSGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGIT 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|197122873|ref|YP_002134824.1| hypothetical protein AnaeK_2470 [Anaeromyxobacter sp. K]
 gi|196172722|gb|ACG73695.1| protein of unknown function DUF1078 domain protein
           [Anaeromyxobacter sp. K]
          Length = 428

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  +   +    R + AN +TI  +  +++  + + R
Sbjct: 382 AGSLEQSNVDLAEQFVRLIAAQRAFQANSKTITTADQLLSELIAMKR 428



 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L+ +     +GL   S  + ++ +NIANA T G       ++    +FE+ +  S
Sbjct: 3  LLTALSSGTTGLQASSLELSVVGDNIANANTVG-------FKSGRAAFEDALSQS 50


>gi|150021173|ref|YP_001306527.1| hypothetical protein Tmel_1293 [Thermosipho melanesiensis BI429]
 gi|149793694|gb|ABR31142.1| protein of unknown function DUF1078 domain protein [Thermosipho
           melanesiensis BI429]
          Length = 705

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E   +    R + AN + +  +  ++   ++L R
Sbjct: 659 SGALEMSNVDLSEEFTKLIIAQRGFQANARVVTTADQILQEVVNLRR 705


>gi|157371207|ref|YP_001479196.1| flagellar hook protein FlgE [Serratia proteamaculans 568]
 gi|157322971|gb|ABV42068.1| flagellar basal body FlaE domain protein [Serratia proteamaculans
           568]
          Length = 407

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 362 SGALEASNVDLSQELVNMIVAQRNYQSNAQTIKTQDSILQTLVSL 406



 Score = 41.5 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T+G       ++  T+SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATSG-------FKSGTVSFADMFAGSQVGLGVKV 54

Query: 64 KKIGV 68
            I  
Sbjct: 55 AGITQ 59


>gi|91792665|ref|YP_562316.1| flagellar basal body rod protein FlgF [Shewanella denitrificans
           OS217]
 gi|91714667|gb|ABE54593.1| Flagellar basal-body rod FlgF [Shewanella denitrificans OS217]
          Length = 247

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NVN + E   +    R Y   ++ +K + +    +  L+R
Sbjct: 198 ESGAIEASNVNPVEEMVALISIQRQYEMQVKMMKTAEETDQASSSLMR 245


>gi|254292906|ref|YP_003058929.1| flagellar basal-body rod protein FlgF [Hirschia baltica ATCC 49814]
 gi|254041437|gb|ACT58232.1| flagellar basal-body rod protein FlgF [Hirschia baltica ATCC 49814]
          Length = 255

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           A G V+  NV+ +VE   M E +R Y +  + I  S+DM    ++
Sbjct: 205 AQGFVESSNVSAIVEMTQMIEISRAYQSVAKLISNSNDMREKAIN 249



 Score = 38.4 bits (89), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 9/39 (23%)

Query: 1  MDYLIASAHIANSGLAVQ---SARMQIISENIANARTTG 36
          MD    S  I   GL+ Q     +M + + N+AN  TTG
Sbjct: 1  MD---NSLAI---GLSTQQLLRKKMDVTANNLANMNTTG 33


>gi|124516714|gb|EAY58222.1| putative flagellar basal body rod protein [Leptospirillum rubarum]
          Length = 267

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 80  GHPVANAS---GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             PVA+     G  +  NVN   E   M E  R +  +L+ ++  +++   T++
Sbjct: 208 TAPVADPDVLAGGFESSNVNGTFEMVRMIEAMRSFETHLKALQTLNELTRRTVN 261



 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 7/43 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          SG   Q   M +++ N+AN  T G       ++R  ++F   +
Sbjct: 10 SGAQAQEQLMDVLTNNLANVNTPG-------FKRDRVTFRTYL 45


>gi|258404710|ref|YP_003197452.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM
           5692]
 gi|257796937|gb|ACV67874.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM
           5692]
          Length = 433

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  +  DM  T R Y AN +TI  + DM+   ++L R
Sbjct: 391 EQSTVDIAKQFTDMITTQRAYQANSRTITTTDDMLQEVVNLKR 433


>gi|220917665|ref|YP_002492969.1| protein of unknown function DUF1078 domain protein
           [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955519|gb|ACL65903.1| protein of unknown function DUF1078 domain protein
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 428

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  +   +    R + AN +TI  +  +++  + + R
Sbjct: 382 AGSLEQSNVDLAEQFVRLIAAQRAFQANSKTITTADQLLSELIAMKR 428



 Score = 36.8 bits (85), Expect = 1.00,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L+ +     +GL   S  + ++ +NIANA T G       ++    +FE+ +  S
Sbjct: 3  LLTALSSGTTGLQASSLELSVVGDNIANANTVG-------FKSGRAAFEDALSQS 50


>gi|217077695|ref|YP_002335413.1| flagellar hook protein FlgE [Thermosipho africanus TCF52B]
 gi|217037550|gb|ACJ76072.1| flagellar hook protein FlgE [Thermosipho africanus TCF52B]
          Length = 704

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E   +    R + AN + +  +  ++   ++L R
Sbjct: 658 SGALEMSNVDLSEEFTKLIIAQRGFQANARVVTTADQILQEVVNLRR 704


>gi|16760053|ref|NP_455670.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16764533|ref|NP_460148.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29142176|ref|NP_805518.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62179694|ref|YP_216111.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|167553035|ref|ZP_02346785.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167994041|ref|ZP_02575133.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168264030|ref|ZP_02686003.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168467129|ref|ZP_02700971.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168822620|ref|ZP_02834620.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194442954|ref|YP_002040431.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|197250199|ref|YP_002146866.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197265088|ref|ZP_03165162.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|198245171|ref|YP_002215960.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204930842|ref|ZP_03221715.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205353085|ref|YP_002226886.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207857315|ref|YP_002243966.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213161844|ref|ZP_03347554.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213424680|ref|ZP_03357445.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213582037|ref|ZP_03363863.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213648926|ref|ZP_03378979.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213865505|ref|ZP_03387624.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|224584319|ref|YP_002638117.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238911003|ref|ZP_04654840.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289806609|ref|ZP_06537238.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
 gi|289828580|ref|ZP_06546405.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|60392287|sp|P0A1J1|FLGE_SALTY RecName: Full=Flagellar hook protein flgE
 gi|60392288|sp|P0A1J2|FLGE_SALTI RecName: Full=Flagellar hook protein flgE
 gi|25511789|pir||AB0640 flagellar hook protein FlgE [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|47673|emb|CAA36022.1| flgE protein (AA 1-403) [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16419694|gb|AAL20107.1| hook protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16502347|emb|CAD08301.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137806|gb|AAO69367.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62127327|gb|AAX65030.1| flagellar biosynthesis, hook protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|194401617|gb|ACF61839.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|195630413|gb|EDX49039.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197213902|gb|ACH51299.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197243343|gb|EDY25963.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197939687|gb|ACH77020.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204320301|gb|EDZ05505.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205272866|emb|CAR37795.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205322416|gb|EDZ10255.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205328054|gb|EDZ14818.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205341012|gb|EDZ27776.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205347322|gb|EDZ33953.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206709118|emb|CAR33451.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224468846|gb|ACN46676.1| flagellar hook protein [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|261246388|emb|CBG24197.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992951|gb|ACY87836.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157718|emb|CBW17210.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912164|dbj|BAJ36138.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320086383|emb|CBY96156.1| Flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321223795|gb|EFX48858.1| Flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322714164|gb|EFZ05735.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323129447|gb|ADX16877.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|326623708|gb|EGE30053.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326628165|gb|EGE34508.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
 gi|332988068|gb|AEF07051.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 403

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 358 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 402



 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|120554033|ref|YP_958384.1| hypothetical protein Maqu_1105 [Marinobacter aquaeolei VT8]
 gi|120323882|gb|ABM18197.1| protein of unknown function DUF1078 domain protein [Marinobacter
           aquaeolei VT8]
          Length = 637

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  ++    R Y AN +TI+ S  +  T ++L
Sbjct: 595 VEDSNVDLSAELVNLIIAQRNYQANAKTIETSDAVTQTIINL 636



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 17/73 (23%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--------- 57
          + +   SGL   S  + +   NIANA T G       ++   + F ++            
Sbjct: 2  AFNTGLSGLRAASVDLDVTGNNIANASTVG-------FKSSKVQFGDLYASGFLSAGTNP 54

Query: 58 -SGGVRVKKIGVD 69
             GVRV+ +   
Sbjct: 55 IGDGVRVQDVKQS 67


>gi|323976551|gb|EGB71639.1| fagellar hook-basal body protein [Escherichia coli TW10509]
          Length = 401

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.1 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|167750722|ref|ZP_02422849.1| hypothetical protein EUBSIR_01700 [Eubacterium siraeum DSM 15702]
 gi|167656401|gb|EDS00531.1| hypothetical protein EUBSIR_01700 [Eubacterium siraeum DSM 15702]
          Length = 521

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E +DM  T R + AN + I  S  M+   ++L R
Sbjct: 475 SGALEMSNVDLSQEFSDMIITQRGFQANSRIITTSDTMLEEIVNLKR 521



 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          SGL     +M +I  NIAN  TTG       +  + + ++   +GS G
Sbjct: 10 SGLKTHQQKMDVIGNNIANVNTTGFKTSVTTF--QEVYYQTKKNGSAG 55


>gi|121534935|ref|ZP_01666754.1| protein of unknown function DUF1078 domain protein [Thermosinus
           carboxydivorans Nor1]
 gi|121306534|gb|EAX47457.1| protein of unknown function DUF1078 domain protein [Thermosinus
           carboxydivorans Nor1]
          Length = 247

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G+++  NVNV+ E  ++    R Y  N + ++    ++   ++
Sbjct: 199 QGVLELANVNVVAEMVNLIAGYRAYEINAKMVQTHDQLLDKAVN 242


>gi|182680457|ref|YP_001834603.1| flagellar hook protein FlgE [Beijerinckia indica subsp. indica
          ATCC 9039]
 gi|182636340|gb|ACB97114.1| flagellar basal body FlaE domain protein [Beijerinckia indica
          subsp. indica ATCC 9039]
          Length = 415

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 14/68 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
          L ++   + SG+A QS ++  +S+NIAN+ TTG       Y++    FE +++G      
Sbjct: 3  LYSALTASVSGMAAQSNKLSAVSDNIANSNTTG-------YKQADTEFETLVNGLNKTSY 55

Query: 58 -SGGVRVK 64
           +GGV+  
Sbjct: 56 DAGGVKTT 63



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV++  +  DM    R Y AN +  +    ++T  ++L++
Sbjct: 375 SNVDLAAQLTDMIVAQRGYEANSKVFETGSTLLTELVNLVK 415


>gi|56413836|ref|YP_150911.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362759|ref|YP_002142396.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56128093|gb|AAV77599.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094236|emb|CAR59741.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 403

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 358 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 402



 Score = 42.2 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|221635451|ref|YP_002523327.1| flagellar basal-body rod protein FlgG [Thermomicrobium roseum DSM
           5159]
 gi|221158111|gb|ACM07229.1| flagellar basal-body rod protein FlgG [Thermomicrobium roseum DSM
           5159]
          Length = 259

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++ NV+++ +   +    R Y ANL++++   +++     L
Sbjct: 217 EHSNVDLVDQMTQLIMAQRAYTANLRSLQTIDELIEIATRL 257



 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 24/66 (36%), Gaps = 9/66 (13%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          A SG+  Q  R+  I+ N+AN  T G       ++     F  V       RV + G   
Sbjct: 8  AVSGVRAQQVRLDTIAHNLANLETDG-------FKAARADFTAVPPQEY--RVARAGEAP 58

Query: 71 STFVEE 76
             V  
Sbjct: 59 LGPVPI 64


>gi|218516400|ref|ZP_03513240.1| flagellar hook protein FlgE [Rhizobium etli 8C-3]
          Length = 126

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
             S   A SG++ Q+ R+  +S+NIA+A T G
Sbjct: 28 FFGSMKTAVSGMSAQANRLSTVSDNIADANTVG 60


>gi|91976162|ref|YP_568821.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisB5]
 gi|91682618|gb|ABE38920.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB5]
          Length = 253

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G V+  NVN ++E   M E  R Y +    ++Q  D+    ++
Sbjct: 203 QGYVEKSNVNSVLEMTRMIEVTRSYQSVSALLQQESDLQKAAIE 246


>gi|331269339|ref|YP_004395831.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
 gi|329125889|gb|AEB75834.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
          Length = 262

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G  +  NV++  E +D+  T R +  N   +K + +M     +L
Sbjct: 215 QGFTEQSNVDLGKEMSDLIITQRAFQLNSSALKTADEMWGMANNL 259



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   + SG+A +  ++  IS N+AN+ T G       Y+R  + F ++M  +
Sbjct: 1  MLRSIWNSRSGMAAEMDKLDAISNNMANSTTVG-------YKRVDVKFNDLMQEN 48


>gi|192358786|ref|YP_001982400.1| flagellar hook protein FlgE [Cellvibrio japonicus Ueda107]
 gi|190684951|gb|ACE82629.1| flagellar hook protein FlgE [Cellvibrio japonicus Ueda107]
          Length = 803

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G V+  NV++  +  ++    R Y AN +TI+ ++    T ++L
Sbjct: 758 AGAVEESNVDLSEQLVNLIIAQRNYQANAKTIETANATTQTIINL 802


>gi|170683341|ref|YP_001744104.1| flagellar hook protein FlgE [Escherichia coli SMS-3-5]
 gi|300938641|ref|ZP_07153370.1| flagellar hook protein FlgE [Escherichia coli MS 21-1]
 gi|170521059|gb|ACB19237.1| flagellar hook protein FlgE [Escherichia coli SMS-3-5]
 gi|300456426|gb|EFK19919.1| flagellar hook protein FlgE [Escherichia coli MS 21-1]
          Length = 401

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|324007916|gb|EGB77135.1| flagellar hook protein FlgE [Escherichia coli MS 57-2]
          Length = 401

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|323190588|gb|EFZ75860.1| flagellar hook protein flgE [Escherichia coli RN587/1]
          Length = 401

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + II  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDIIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|308071139|ref|YP_003872744.1| flagellar basal body rod protein [Paenibacillus polymyxa E681]
 gi|305860418|gb|ADM72206.1| Flagellar basal body rod protein [Paenibacillus polymyxa E681]
          Length = 294

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            G ++  NV+      DM    R Y AN + I+
Sbjct: 246 QGYLEVSNVDASQSMVDMMAALRAYEANQKVIQ 278



 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++   + A +GL  Q  R   +++NIAN  TTG
Sbjct: 1  MLRGLYTAAAGLMTQQRRHDTVTQNIANMNTTG 33


>gi|301051140|ref|ZP_07197970.1| flagellar hook protein FlgE [Escherichia coli MS 185-1]
 gi|300297161|gb|EFJ53546.1| flagellar hook protein FlgE [Escherichia coli MS 185-1]
          Length = 401

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|295096225|emb|CBK85315.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 402

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 40.7 bits (95), Expect = 0.073,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G   GS        SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGS-------ASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|224825164|ref|ZP_03698270.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum
           2002]
 gi|224602835|gb|EEG09012.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum
           2002]
          Length = 419

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  DM    R Y AN Q+IK    ++ T ++L
Sbjct: 378 EQSNVDLNSELVDMIVAQRFYQANAQSIKTEDTILQTLINL 418



 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 10/72 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVRV--KKIGVD 69
          SGLA  S +++++  N+ANA T G       ++R    F ++   S  GV      IGV 
Sbjct: 8  SGLAAASKQLEVVGNNVANASTNG-------FKRSRSEFADMYGSSLYGVSNAQAGIGVR 60

Query: 70 QSTFVEEFDPGH 81
           +   + FD G+
Sbjct: 61 TAEVSQLFDQGN 72


>gi|218700421|ref|YP_002408050.1| flagellar hook protein FlgE [Escherichia coli IAI39]
 gi|218370407|emb|CAR18214.1| flagellar hook protein [Escherichia coli IAI39]
          Length = 400

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 355 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 399



 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|119469950|ref|ZP_01612755.1| flagellar hook protein E [Alteromonadales bacterium TW-7]
 gi|119446660|gb|EAW27933.1| flagellar hook protein E [Alteromonadales bacterium TW-7]
          Length = 454

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NVN+  E  D+    R + AN + ++ +  +    L +
Sbjct: 413 EQSNVNLTNELVDLISAQRNFQANSRALEVNSTLQQAILQI 453



 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG-GV 61
          S +IA +G+A     + + + NIAN  TTG        +D Y      F      +G GV
Sbjct: 2  SFNIALTGIAAAQKDLDVTANNIANVNTTGFKESRAEFADVYASS--VFSSGRTKNGDGV 59

Query: 62 RVKKIGV 68
          +   +  
Sbjct: 60 QTTMVAQ 66


>gi|91224199|ref|ZP_01259462.1| flagellar hook protein E [Vibrio alginolyticus 12G01]
 gi|269965644|ref|ZP_06179757.1| Flagellar hook protein flgE [Vibrio alginolyticus 40B]
 gi|91191110|gb|EAS77376.1| flagellar hook protein E [Vibrio alginolyticus 12G01]
 gi|269829712|gb|EEZ83948.1| Flagellar hook protein flgE [Vibrio alginolyticus 40B]
          Length = 398

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G   G          F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGG-------RTEFSAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NV++  E   +    R Y AN +TI  S  +    
Sbjct: 354 GALEGSNVDLTSELVALMTAQRNYQANAKTISTSDKLTQAL 394


>gi|56460251|ref|YP_155532.1| flagella basal body rod protein [Idiomarina loihiensis L2TR]
 gi|56179261|gb|AAV81983.1| Flagella basal body rod protein [Idiomarina loihiensis L2TR]
          Length = 247

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 83  VANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            A+A+     G ++  NVN + E   M    R Y  N++ +K + +    +  L+R
Sbjct: 190 FADANVKLQIGALEGSNVNSVEEMTHMIALQRQYEMNVKLMKTADENAQRSESLMR 245


>gi|322382385|ref|ZP_08056292.1| FlgG-like protein [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153738|gb|EFX46113.1| FlgG-like protein [Paenibacillus larvae subsp. larvae B-3650]
          Length = 266

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 220 TGSLEMSNVDLTSEFTEMIVAQRGFQANSRIITTSDEVLQEVVNLKR 266



 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 18/66 (27%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-----------HGSGGV 61
          SG+     ++ +I  NIAN  T G       ++   + F+++M              GGV
Sbjct: 6  SGMRGFQTKLDVIGNNIANVNTIG-------FKGSRVMFQDLMSQTIRGATGPTDTQGGV 58

Query: 62 RVKKIG 67
            ++IG
Sbjct: 59 NGQQIG 64


>gi|254496889|ref|ZP_05109737.1| flagellar basal body rod protein FlgG [Legionella drancourtii
           LLAP12]
 gi|254353908|gb|EET12595.1| flagellar basal body rod protein FlgG [Legionella drancourtii
           LLAP12]
          Length = 261

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 80  GHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            +P +N  G      ++  NVNV+ E  +M +  R Y    + ++   +M+ 
Sbjct: 204 NNPGSNGLGTLLQNNLEASNVNVVEELVNMIQAQRGYEITAKGMQTVDNMLQ 255



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  ++ SGL  Q   +  I+ N+AN  TTG       Y++    FE++++ +
Sbjct: 1  MQPALWVSKSGLEAQEKTIATIANNLANVNTTG-------YKKDRAQFEDLLYQN 48


>gi|225871945|ref|YP_002753399.1| flagellar basal-body rod protein FlgG [Acidobacterium capsulatum
           ATCC 51196]
 gi|225791437|gb|ACO31527.1| flagellar basal-body rod protein FlgG [Acidobacterium capsulatum
           ATCC 51196]
          Length = 262

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV+V+     M    R Y +N + IK +  M +
Sbjct: 215 QQGYLENSNVDVVGAFVQMVLAQRAYESNSKVIKAADGMYS 255



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + A SG++ Q   +  I+ N+AN+ T G       +R + + F+++++ +
Sbjct: 1  MIRALYTAASGMSAQQMNLDTIANNLANSSTVG-------FRERQLQFQDMIYQN 48


>gi|254248705|ref|ZP_04942025.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
 gi|124875206|gb|EAY65196.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
          Length = 414

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVN+  E  ++    R Y AN QTIK    +    L+L
Sbjct: 375 SNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQALLNL 413



 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPG 40
          SGLA  S+ + +I  NIANA T G   G
Sbjct: 8  SGLAGASSNLDVIGNNIANANTVGFKQG 35


>gi|153953798|ref|YP_001394563.1| flagellar basal body rod protein FlgG [Clostridium kluyveri DSM
          555]
 gi|219854414|ref|YP_002471536.1| hypothetical protein CKR_1071 [Clostridium kluyveri NBRC 12016]
 gi|146346679|gb|EDK33215.1| FlgG2 [Clostridium kluyveri DSM 555]
 gi|219568138|dbj|BAH06122.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 261

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 7/46 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + S +  +  ++  IS N+ANA T G       Y+R+ ++F+++++
Sbjct: 8  SASAMNAEQEKLNSISNNMANAETVG-------YKREVVNFQDLVY 46



 Score = 41.5 bits (97), Expect = 0.046,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 81  HPVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  AN   G ++  NV++  E  DM    R +    + +  + +M
Sbjct: 208 NQDANILQGYLEQSNVDLGREITDMILAQRAFALGAKGLTTADEM 252


>gi|291558205|emb|CBL35322.1| fagellar hook-basal body proteins [Eubacterium siraeum V10Sc8a]
          Length = 503

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E +DM  T R + AN + I  S  M+   ++L R
Sbjct: 457 SGALEMSNVDLSQEFSDMIITQRGFQANSRIITTSDTMLEEIVNLKR 503


>gi|229917022|ref|YP_002885668.1| hypothetical protein EAT1b_1296 [Exiguobacterium sp. AT1b]
 gi|229468451|gb|ACQ70223.1| protein of unknown function DUF1078 domain protein [Exiguobacterium
           sp. AT1b]
          Length = 260

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NV++  E  DM  T R Y  N + +  S  MM
Sbjct: 214 EGTLESSNVDLTKEMTDMTITQRAYQMNSRAMSMSDQMM 252


>gi|119775450|ref|YP_928190.1| flagellar hook protein FlgE [Shewanella amazonensis SB2B]
 gi|119767950|gb|ABM00521.1| flagellar hook protein FlgE [Shewanella amazonensis SB2B]
          Length = 453

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVR 62
          S +IA SG+A     +   + NIAN  TTG        +D Y     S  +   G GGV 
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNTTGFKESRAEFADVYAASIFSNSKTQVG-GGVT 60

Query: 63 VKKIGV 68
            ++  
Sbjct: 61 TTQVAQ 66



 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTILQI 452


>gi|291532057|emb|CBK97642.1| fagellar hook-basal body proteins [Eubacterium siraeum 70/3]
          Length = 503

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E +DM  T R + AN + I  S  M+   ++L R
Sbjct: 457 SGALEMSNVDLSQEFSDMIITQRGFQANSRIITTSDTMLEEIVNLKR 503


>gi|213028802|ref|ZP_03343249.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 293

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 248 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 292


>gi|209695762|ref|YP_002263692.1| flagellar hook protein FlgE [Aliivibrio salmonicida LFI1238]
 gi|208009715|emb|CAQ80019.1| flagellar hook protein FlgE [Aliivibrio salmonicida LFI1238]
          Length = 432

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  D+    R + AN + +   + +    L +
Sbjct: 386 QSGTLEQSNIDMTQELVDLISAQRNFQANSRALDVHNQLQQNILQI 431



 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 10 IANSGLAVQSARMQIISENIANART 34
          +A SGL+     +   S N+ANA T
Sbjct: 4  VALSGLSAAQKDLNTTSNNLANANT 28


>gi|163784308|ref|ZP_02179218.1| hypothetical protein HG1285_04693 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880426|gb|EDP74020.1| hypothetical protein HG1285_04693 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 200

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I +   + +G+  Q   + +IS NIAN  T G
Sbjct: 1  MIRALWTSATGMEAQQTNLDVISNNIANVNTVG 33


>gi|26247216|ref|NP_753256.1| flagellar hook protein FlgE [Escherichia coli CFT073]
 gi|227886566|ref|ZP_04004371.1| flagellar hook protein FlgE [Escherichia coli 83972]
 gi|300974380|ref|ZP_07172592.1| flagellar hook protein FlgE [Escherichia coli MS 45-1]
 gi|26107617|gb|AAN79816.1|AE016759_90 Flagellar hook protein flgE [Escherichia coli CFT073]
 gi|227836770|gb|EEJ47236.1| flagellar hook protein FlgE [Escherichia coli 83972]
 gi|300410623|gb|EFJ94161.1| flagellar hook protein FlgE [Escherichia coli MS 45-1]
 gi|307553078|gb|ADN45853.1| flagellar hook protein FlgE [Escherichia coli ABU 83972]
 gi|315291070|gb|EFU50433.1| flagellar hook protein FlgE [Escherichia coli MS 153-1]
          Length = 401

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|193069470|ref|ZP_03050424.1| flagellar hook protein FlgE [Escherichia coli E110019]
 gi|192957218|gb|EDV87667.1| flagellar hook protein FlgE [Escherichia coli E110019]
 gi|323174795|gb|EFZ60410.1| flagellar hook protein flgE [Escherichia coli LT-68]
          Length = 401

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G   G       T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKTG-------TASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|328542111|ref|YP_004302220.1| flagellar hook-basal body protein [polymorphum gilvum SL003B-26A1]
 gi|326411861|gb|ADZ68924.1| Flagellar hook-basal body protein [Polymorphum gilvum SL003B-26A1]
          Length = 545

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E ++M  + R Y A+ + I     M+   +++
Sbjct: 503 IEQSNVDIGTEFSNMIVSQRSYSASTKVITTVDQMLNELMNI 544



 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 9/68 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GV 61
          L  +     SG+  Q + +  IS NI+N  T G       Y+     F  ++ G G  G 
Sbjct: 3  LFGALSTGVSGVIAQGSSLSTISNNISNLNTPG-------YKGSRTLFSHMVTGGGRPGT 55

Query: 62 RVKKIGVD 69
           V      
Sbjct: 56 PVSGSVAS 63


>gi|261821153|ref|YP_003259259.1| flagellar hook protein FlgE [Pectobacterium wasabiae WPP163]
 gi|261605166|gb|ACX87652.1| fagellar hook-basal body protein [Pectobacterium wasabiae WPP163]
          Length = 405

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 366 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQTLVSL 404



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S  + +I  NIAN+ T G   G+       ++F ++  GS    GV+V  + 
Sbjct: 6  AVSGLNAASNNLDVIGNNIANSATVGFKSGA-------VTFADMFAGSKVGMGVKVASVL 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|84388091|ref|ZP_00990987.1| flagellar hook protein [Vibrio splendidus 12B01]
 gi|84377158|gb|EAP94028.1| flagellar hook protein [Vibrio splendidus 12B01]
          Length = 434

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  N+++  E  D+    R + AN ++++  + +    L +
Sbjct: 389 NGSLEQSNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQI 433



 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 6/78 (7%)

Query: 10 IANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +A SGL+     +   S NIANA T           D Y     +        GG +  +
Sbjct: 4  VALSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSSSLFT-NAKTTAGGGAQASQ 62

Query: 66 IGVDQSTFVEEFDPGHPV 83
          +          +   +P+
Sbjct: 63 VAQQFHEGSSIY-TNNPM 79


>gi|297517866|ref|ZP_06936252.1| flagellar hook protein FlgE [Escherichia coli OP50]
          Length = 401

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.1 bits (96), Expect = 0.057,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|261856363|ref|YP_003263646.1| flagellar basal-body rod protein FlgB [Halothiobacillus
          neapolitanus c2]
 gi|261836832|gb|ACX96599.1| flagellar basal-body rod protein FlgB [Halothiobacillus
          neapolitanus c2]
          Length = 132

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +   I    L  QS RM I++ NIANA T         ++ + +SF + +  + G
Sbjct: 4  SIFGIHGQALVFQSQRMGILASNIANADTPN-------FKARDLSFHDALQAAAG 51


>gi|254464969|ref|ZP_05078380.1| flagellar hook protein FlgE [Rhodobacterales bacterium Y4I]
 gi|206685877|gb|EDZ46359.1| flagellar hook protein FlgE [Rhodobacterales bacterium Y4I]
          Length = 435

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V+V  E  DM +T R Y +N + I+   +M+  T ++ R
Sbjct: 395 SAVDVATELTDMIKTQRAYSSNAKVIQTVDEMLQETTNIKR 435



 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 14/70 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          + +S +   SGL+  ++R+  IS+NIAN+ T G       Y+R    F  ++       +
Sbjct: 3  ISSSLNAGVSGLSANASRLASISDNIANSSTRG-------YKRVQTDFHSMVLSGSGGTY 55

Query: 57 GSGGVRVKKI 66
           +GGVR   +
Sbjct: 56 SAGGVRTTNV 65


>gi|161503735|ref|YP_001570847.1| flagellar hook protein FlgE [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160865082|gb|ABX21705.1| hypothetical protein SARI_01820 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 402

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 42.2 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|156976141|ref|YP_001447047.1| flagellar hook protein FlgE [Vibrio harveyi ATCC BAA-1116]
 gi|156527735|gb|ABU72820.1| hypothetical protein VIBHAR_04912 [Vibrio harveyi ATCC BAA-1116]
          Length = 399

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G   G          F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGG-------RTEFAAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NV++  E   +    R Y AN +TI  +  +    
Sbjct: 355 GALEGSNVDLTSELVALMTAQRNYQANAKTISTNDKLTQAL 395


>gi|74311638|ref|YP_310057.1| flagellar hook protein FlgE [Shigella sonnei Ss046]
 gi|157157539|ref|YP_001462310.1| flagellar hook protein FlgE [Escherichia coli E24377A]
 gi|191168462|ref|ZP_03030250.1| flagellar hook protein FlgE [Escherichia coli B7A]
 gi|193064513|ref|ZP_03045593.1| flagellar hook protein FlgE [Escherichia coli E22]
 gi|194438060|ref|ZP_03070153.1| flagellar hook protein FlgE [Escherichia coli 101-1]
 gi|209918330|ref|YP_002292414.1| flagellar hook protein FlgE [Escherichia coli SE11]
 gi|218694610|ref|YP_002402277.1| flagellar hook protein FlgE [Escherichia coli 55989]
 gi|253773900|ref|YP_003036731.1| flagellar hook protein FlgE [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161182|ref|YP_003044290.1| flagellar hook protein FlgE [Escherichia coli B str. REL606]
 gi|256018667|ref|ZP_05432532.1| flagellar hook protein FlgE [Shigella sp. D9]
 gi|260843316|ref|YP_003221094.1| flagellar hook protein FlgE [Escherichia coli O103:H2 str. 12009]
 gi|260854559|ref|YP_003228450.1| flagellar hook protein FlgE [Escherichia coli O26:H11 str. 11368]
 gi|260867439|ref|YP_003233841.1| flagellar hook protein FlgE [Escherichia coli O111:H- str. 11128]
 gi|293433366|ref|ZP_06661794.1| flagellar hook protein FlgE [Escherichia coli B088]
 gi|300816778|ref|ZP_07096998.1| flagellar hook protein FlgE [Escherichia coli MS 107-1]
 gi|300821143|ref|ZP_07101292.1| flagellar hook protein FlgE [Escherichia coli MS 119-7]
 gi|300902467|ref|ZP_07120449.1| flagellar hook protein FlgE [Escherichia coli MS 84-1]
 gi|300922602|ref|ZP_07138702.1| flagellar hook protein FlgE [Escherichia coli MS 182-1]
 gi|300928372|ref|ZP_07143906.1| flagellar hook protein FlgE [Escherichia coli MS 187-1]
 gi|301304985|ref|ZP_07211087.1| flagellar hook protein FlgE [Escherichia coli MS 124-1]
 gi|301328554|ref|ZP_07221615.1| flagellar hook protein FlgE [Escherichia coli MS 78-1]
 gi|309798070|ref|ZP_07692445.1| flagellar hook protein FlgE [Escherichia coli MS 145-7]
 gi|331667476|ref|ZP_08368340.1| flagellar hook protein FlgE [Escherichia coli TA271]
 gi|331676867|ref|ZP_08377563.1| flagellar hook protein FlgE [Escherichia coli H591]
 gi|332279736|ref|ZP_08392149.1| flagellar hook protein FlgE [Shigella sp. D9]
 gi|73855115|gb|AAZ87822.1| flagellar hook protein [Shigella sonnei Ss046]
 gi|157079569|gb|ABV19277.1| flagellar hook protein FlgE [Escherichia coli E24377A]
 gi|190901481|gb|EDV61242.1| flagellar hook protein FlgE [Escherichia coli B7A]
 gi|192927765|gb|EDV82379.1| flagellar hook protein FlgE [Escherichia coli E22]
 gi|194422996|gb|EDX38990.1| flagellar hook protein FlgE [Escherichia coli 101-1]
 gi|209911589|dbj|BAG76663.1| flagellar hook protein FlgE [Escherichia coli SE11]
 gi|218351342|emb|CAU97048.1| flagellar hook protein [Escherichia coli 55989]
 gi|253324944|gb|ACT29546.1| flagellar basal body FlaE domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973083|gb|ACT38754.1| flagellar hook protein E [Escherichia coli B str. REL606]
 gi|253977297|gb|ACT42967.1| flagellar hook protein E [Escherichia coli BL21(DE3)]
 gi|257753208|dbj|BAI24710.1| flagellar hook protein FlgE [Escherichia coli O26:H11 str. 11368]
 gi|257758463|dbj|BAI29960.1| flagellar hook protein FlgE [Escherichia coli O103:H2 str. 12009]
 gi|257763795|dbj|BAI35290.1| flagellar hook protein FlgE [Escherichia coli O111:H- str. 11128]
 gi|291324185|gb|EFE63607.1| flagellar hook protein FlgE [Escherichia coli B088]
 gi|300405499|gb|EFJ89037.1| flagellar hook protein FlgE [Escherichia coli MS 84-1]
 gi|300421079|gb|EFK04390.1| flagellar hook protein FlgE [Escherichia coli MS 182-1]
 gi|300463630|gb|EFK27123.1| flagellar hook protein FlgE [Escherichia coli MS 187-1]
 gi|300526442|gb|EFK47511.1| flagellar hook protein FlgE [Escherichia coli MS 119-7]
 gi|300530552|gb|EFK51614.1| flagellar hook protein FlgE [Escherichia coli MS 107-1]
 gi|300839703|gb|EFK67463.1| flagellar hook protein FlgE [Escherichia coli MS 124-1]
 gi|300844946|gb|EFK72706.1| flagellar hook protein FlgE [Escherichia coli MS 78-1]
 gi|308118353|gb|EFO55615.1| flagellar hook protein FlgE [Escherichia coli MS 145-7]
 gi|313848602|emb|CAQ31597.2| flagellar hook protein FlgE, subunit of Flagellum [Escherichia coli
           BL21(DE3)]
 gi|315253877|gb|EFU33845.1| flagellar hook protein FlgE [Escherichia coli MS 85-1]
 gi|323156883|gb|EFZ43017.1| flagellar hook protein flgE [Escherichia coli EPECa14]
 gi|323163758|gb|EFZ49577.1| flagellar hook protein flgE [Escherichia coli E128010]
 gi|323165584|gb|EFZ51371.1| flagellar hook protein flgE [Shigella sonnei 53G]
 gi|323175693|gb|EFZ61287.1| flagellar hook protein flgE [Escherichia coli 1180]
 gi|323185801|gb|EFZ71162.1| flagellar hook protein flgE [Escherichia coli 1357]
 gi|323947622|gb|EGB43626.1| fagellar hook-basal body protein [Escherichia coli H120]
 gi|323962675|gb|EGB58253.1| fagellar hook-basal body protein [Escherichia coli H489]
 gi|323973335|gb|EGB68524.1| fagellar hook-basal body protein [Escherichia coli TA007]
 gi|324017420|gb|EGB86639.1| flagellar hook protein FlgE [Escherichia coli MS 117-3]
 gi|324117353|gb|EGC11260.1| fagellar hook-basal body protein [Escherichia coli E1167]
 gi|331065061|gb|EGI36956.1| flagellar hook protein FlgE [Escherichia coli TA271]
 gi|331075556|gb|EGI46854.1| flagellar hook protein FlgE [Escherichia coli H591]
 gi|332102088|gb|EGJ05434.1| flagellar hook protein FlgE [Shigella sp. D9]
          Length = 401

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.1 bits (96), Expect = 0.057,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|300918678|ref|ZP_07135259.1| flagellar hook protein FlgE [Escherichia coli MS 115-1]
 gi|300414172|gb|EFJ97482.1| flagellar hook protein FlgE [Escherichia coli MS 115-1]
          Length = 401

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.1 bits (96), Expect = 0.058,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|296282279|ref|ZP_06860277.1| hypothetical protein CbatJ_01595 [Citromicrobium bathyomarinum
           JL354]
          Length = 269

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E   +    R + AN + I  +  +  T ++L
Sbjct: 223 SGSLERSNVDIAEELVGLITAQRNFQANAKAIDTATQISQTVMNL 267


>gi|283833630|ref|ZP_06353371.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220]
 gi|291071313|gb|EFE09422.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220]
          Length = 411

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 366 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 410



 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G   G+        SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGA-------ASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|218549196|ref|YP_002382987.1| flagellar hook protein FlgE [Escherichia fergusonii ATCC 35469]
 gi|218356737|emb|CAQ89365.1| flagellar hook protein [Escherichia fergusonii ATCC 35469]
          Length = 401

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.1 bits (96), Expect = 0.059,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|161614600|ref|YP_001588565.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168237259|ref|ZP_02662317.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168244776|ref|ZP_02669708.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194449419|ref|YP_002045176.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194736988|ref|YP_002114176.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|161363964|gb|ABX67732.1| hypothetical protein SPAB_02350 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194407723|gb|ACF67942.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194712490|gb|ACF91711.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197289882|gb|EDY29243.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|205336442|gb|EDZ23206.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 403

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 358 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 402



 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|90418365|ref|ZP_01226277.1| putative flagellar hook protein FlgE [Aurantimonas manganoxydans
          SI85-9A1]
 gi|90338037|gb|EAS51688.1| putative flagellar hook protein FlgE [Aurantimonas manganoxydans
          SI85-9A1]
          Length = 388

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 7/53 (13%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
             + SG+  Q+ R+  +SENIAN+ T G       Y+R +  F  ++   GG
Sbjct: 7  FRTSVSGMNAQANRLSTVSENIANSSTNG-------YKRNSTEFASLVLAQGG 52



 Score = 43.4 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M E+ R Y AN +  +   +++   ++L R
Sbjct: 346 EQSNVDLASELTSMIESQRSYSANSKVFQTGAEILDVLVNLKR 388


>gi|95929857|ref|ZP_01312598.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
 gi|95134153|gb|EAT15811.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
          Length = 548

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M  T R + AN + I  + +++   ++L R
Sbjct: 506 EMSNVDLAQEFVKMITTQRGFQANSKIITTTDELLGELINLKR 548


>gi|315637837|ref|ZP_07893027.1| flagellar hook protein [Campylobacter upsaliensis JV21]
 gi|315482078|gb|EFU72692.1| flagellar hook protein [Campylobacter upsaliensis JV21]
          Length = 545

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 26/44 (59%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G ++  NV++ +E +++  T R + A+ ++I  S  M+   +++
Sbjct: 500 GFLEQSNVDLSMELSNLIVTQRAFDASSKSITTSDQMIQKAINM 543


>gi|301023263|ref|ZP_07187060.1| flagellar hook protein FlgE [Escherichia coli MS 69-1]
 gi|300397108|gb|EFJ80646.1| flagellar hook protein FlgE [Escherichia coli MS 69-1]
          Length = 401

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.1 bits (96), Expect = 0.060,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|281178185|dbj|BAI54515.1| flagellar hook protein FlgE [Escherichia coli SE15]
          Length = 401

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.1 bits (96), Expect = 0.060,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|167467491|ref|ZP_02332195.1| flagellar hook protein FlgE [Yersinia pestis FV-1]
          Length = 314

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 269 SGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVSL 313


>gi|167464160|ref|ZP_02329249.1| flagellar basal body rod protein FlgG [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 270

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 224 TGSLEMSNVDLTSEFTEMIVAQRGFQANSRIITTSDEVLQEVVNLKR 270



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 18/75 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          ++ S +   SG+     ++ +I  NIAN  T G       ++   + F+++M        
Sbjct: 1  MLRSMYSGISGMRGFQTKLDVIGNNIANVNTIG-------FKGSRVMFQDLMSQTIRGAT 53

Query: 56 ---HGSGGVRVKKIG 67
                GGV  ++IG
Sbjct: 54 GPTDTQGGVNGQQIG 68


>gi|195953027|ref|YP_002121317.1| protein of unknown function DUF1078 domain protein
           [Hydrogenobaculum sp. Y04AAS1]
 gi|195932639|gb|ACG57339.1| protein of unknown function DUF1078 domain protein
           [Hydrogenobaculum sp. Y04AAS1]
          Length = 583

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 26/53 (49%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           PG      SG+++  NV++      +    R Y AN + +  S +++  TL++
Sbjct: 528 PGSADIIQSGMLEQSNVDIAQAYIQLVTAERSYQANAKVVTSSDNVLQATLNM 580



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          ++ S + A SGL   +  + IIS N++NA T G       Y+     FE V
Sbjct: 1  MLPSFYNAISGLDAFNNYLSIISNNMSNADTIG-------YKAVNPIFENV 44


>gi|306820921|ref|ZP_07454541.1| flagellar basal body and hook protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551035|gb|EFM39006.1| flagellar basal body and hook protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 372

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 81  HPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           HP       G ++  NV+ + E  DM +  R + ++ + I     +M   
Sbjct: 316 HPFGGKVLQGYLEKSNVSAIDEMVDMIQMYRGFESDQKVINAYDQIMQKA 365



 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +    + A+S +  +  +++IIS NI+N  TT 
Sbjct: 1  MFRGIYTASSAMQTKQNQIEIISNNISNVDTTA 33


>gi|253990127|ref|YP_003041483.1| flagellar hook protein FlgE [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781577|emb|CAQ84740.1| flagellar hook protein flge [Photorhabdus asymbiotica]
          Length = 404

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y +N QTIK    ++ T + +
Sbjct: 363 EASNVDMSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVSM 403



 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 10/63 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +A + +I  NIANA T G       ++  + +F ++  GS    GV++
Sbjct: 2  AFSQAVSGLNAAAANLDVIGNNIANAATYG-------FKSSSAAFADIFAGSQVGLGVKM 54

Query: 64 KKI 66
            I
Sbjct: 55 SGI 57


>gi|311280017|ref|YP_003942248.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1]
 gi|308749212|gb|ADO48964.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1]
          Length = 402

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|153831673|ref|ZP_01984340.1| flagellar hook protein FlgE [Vibrio harveyi HY01]
 gi|269960116|ref|ZP_06174492.1| Flagellar hook protein flgE [Vibrio harveyi 1DA3]
 gi|148872183|gb|EDL71000.1| flagellar hook protein FlgE [Vibrio harveyi HY01]
 gi|269835087|gb|EEZ89170.1| Flagellar hook protein flgE [Vibrio harveyi 1DA3]
          Length = 399

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G   G          F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGG-------RTEFAAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NV++  E   +    R Y AN +TI  +  +    
Sbjct: 355 GALEGSNVDLTSELVALMTAQRNYQANAKTISTNDKLTQAL 395


>gi|114562344|ref|YP_749857.1| flagellar basal body rod protein FlgG [Shewanella frigidimarina
           NCIMB 400]
 gi|114333637|gb|ABI71019.1| flagellar basal-body rod protein FlgG [Shewanella frigidimarina
           NCIMB 400]
          Length = 262

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV  E  ++ +  R+Y  N + I     M++
Sbjct: 217 QGALETSNVNVTEELVNLIQGQRIYEMNSKVISAVDQMLS 256



 Score = 38.8 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 8/65 (12%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
          I+ +G+  Q   + +IS N+ANA T G       +++    FE++++ +   +   I  D
Sbjct: 7  ISKTGVDAQQTNIAVISNNVANASTVG-------FKKSRAVFEDLLYQTVN-QAGGISSD 58

Query: 70 QSTFV 74
           S   
Sbjct: 59 NSKLP 63


>gi|197285510|ref|YP_002151382.1| flagellar hook protein FlgE [Proteus mirabilis HI4320]
 gi|227356001|ref|ZP_03840393.1| flagellar hook protein [Proteus mirabilis ATCC 29906]
 gi|194682997|emb|CAR43446.1| flagellar hook protein [Proteus mirabilis HI4320]
 gi|227163989|gb|EEI48891.1| flagellar hook protein [Proteus mirabilis ATCC 29906]
          Length = 406

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y +N QTIK    ++ T + +
Sbjct: 365 EASNVDMSQELVNMIVAQRNYQSNAQTIKTQDQILQTLVSM 405



 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 10/63 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   +A +  I  NI+N+ T G       ++  T+SF +V  GSG   GV+V
Sbjct: 2  SFSQAVSGLNAAAANLDTIGNNISNSATYG-------FKGATVSFADVFAGSGAGLGVKV 54

Query: 64 KKI 66
            I
Sbjct: 55 SGI 57


>gi|15801193|ref|NP_287210.1| flagellar hook protein FlgE [Escherichia coli O157:H7 EDL933]
 gi|15830708|ref|NP_309481.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. Sakai]
 gi|168747148|ref|ZP_02772170.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4113]
 gi|168758631|ref|ZP_02783638.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4401]
 gi|168767735|ref|ZP_02792742.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4486]
 gi|168773921|ref|ZP_02798928.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4196]
 gi|168783606|ref|ZP_02808613.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4076]
 gi|168790011|ref|ZP_02815018.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC869]
 gi|168802021|ref|ZP_02827028.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC508]
 gi|195935466|ref|ZP_03080848.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4024]
 gi|208809224|ref|ZP_03251561.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4206]
 gi|208814886|ref|ZP_03256065.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4045]
 gi|208822570|ref|ZP_03262889.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4042]
 gi|209395987|ref|YP_002269922.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4115]
 gi|254792458|ref|YP_003077295.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. TW14359]
 gi|261227019|ref|ZP_05941300.1| flagellar hook protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256253|ref|ZP_05948786.1| flagellar hook protein [Escherichia coli O157:H7 str. FRIK966]
 gi|291282096|ref|YP_003498914.1| Flagellar hook protein FlgE [Escherichia coli O55:H7 str. CB9615]
 gi|12514614|gb|AAG55822.1|AE005317_11 flagellar biosynthesis, hook protein [Escherichia coli O157:H7 str.
           EDL933]
 gi|13360918|dbj|BAB34877.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. Sakai]
 gi|187770405|gb|EDU34249.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4196]
 gi|188018069|gb|EDU56191.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4113]
 gi|188999079|gb|EDU68065.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4076]
 gi|189354568|gb|EDU72987.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4401]
 gi|189363151|gb|EDU81570.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4486]
 gi|189370482|gb|EDU88898.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC869]
 gi|189375951|gb|EDU94367.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC508]
 gi|208729025|gb|EDZ78626.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4206]
 gi|208731534|gb|EDZ80222.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4045]
 gi|208738055|gb|EDZ85738.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4042]
 gi|209157387|gb|ACI34820.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4115]
 gi|209773378|gb|ACI85001.1| flagellar hook protein FlgE [Escherichia coli]
 gi|209773382|gb|ACI85003.1| flagellar hook protein FlgE [Escherichia coli]
 gi|209773384|gb|ACI85004.1| flagellar hook protein FlgE [Escherichia coli]
 gi|209773386|gb|ACI85005.1| flagellar hook protein FlgE [Escherichia coli]
 gi|254591858|gb|ACT71219.1| flagellar hook protein [Escherichia coli O157:H7 str. TW14359]
 gi|290761969|gb|ADD55930.1| Flagellar hook protein FlgE [Escherichia coli O55:H7 str. CB9615]
 gi|320189759|gb|EFW64415.1| Flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC1212]
 gi|320637527|gb|EFX07327.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. G5101]
 gi|320643088|gb|EFX12289.1| flagellar hook protein FlgE [Escherichia coli O157:H- str. 493-89]
 gi|320648546|gb|EFX17201.1| flagellar hook protein FlgE [Escherichia coli O157:H- str. H 2687]
 gi|320653860|gb|EFX21934.1| flagellar hook protein FlgE [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320659340|gb|EFX26909.1| flagellar hook protein FlgE [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320664475|gb|EFX31626.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. LSU-61]
 gi|326339298|gb|EGD63112.1| Flagellar hook protein FlgE [Escherichia coli O157:H7 str. 1125]
 gi|326344741|gb|EGD68489.1| Flagellar hook protein FlgE [Escherichia coli O157:H7 str. 1044]
          Length = 401

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.063,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|293395583|ref|ZP_06639866.1| flagellar hook protein FlgE [Serratia odorifera DSM 4582]
 gi|291421902|gb|EFE95148.1| flagellar hook protein FlgE [Serratia odorifera DSM 4582]
          Length = 411

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 366 SGALEASNVDLSQELVNMIVAQRNYQSNAQTIKTQDSILQTLVSL 410



 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G   GS       +SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATAGFKSGS-------VSFADMFAGSQVGLGVKV 54

Query: 64 KKIGV 68
            I  
Sbjct: 55 AGITQ 59


>gi|206562843|ref|YP_002233606.1| flagellar hook protein FlgE [Burkholderia cenocepacia J2315]
 gi|198038883|emb|CAR54845.1| flagellar hook protein 2 FlgE2 [Burkholderia cenocepacia J2315]
          Length = 414

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVN+  E  ++    R Y AN QTIK    +  T L+L
Sbjct: 375 SNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQTLLNL 413



 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPG 40
          SGLA  S+ + +I  NIANA T G   G
Sbjct: 8  SGLAGASSNLDVIGNNIANANTVGFKQG 35


>gi|91792664|ref|YP_562315.1| flagellar hook protein FlgE [Shewanella denitrificans OS217]
 gi|91714666|gb|ABE54592.1| protein of unknown function DUF1078-like protein [Shewanella
           denitrificans OS217]
          Length = 455

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 414 EQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTILQI 454



 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 10/99 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHG-SGGV 61
          S +IA SG+A     +   + NIAN  T G        +D Y      F        GGV
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNTIGFKESRAEFADVYA--NSIFSNGKTAVGGGV 59

Query: 62 RVKKIGVDQSTFVEEFDPGHPV-ANASG--IVKYPNVNV 97
             ++    S    +F       A + G   V   N++ 
Sbjct: 60 TTTQVAQQFSQGSLQFTSNALDLAISGGGFFVTSANIDT 98


>gi|253573527|ref|ZP_04850870.1| flagellar basal body rod protein FlgG [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847055|gb|EES75060.1| flagellar basal body rod protein FlgG [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 274

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 229 GQLEMSNVDLTGEFTEMIVAQRGFQANSRIITTSDEVLQEVVNLKR 274



 Score = 40.3 bits (94), Expect = 0.080,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTI--SFEEVMHGS 58
          ++ S +   SG+     ++ +I  NIAN  T G   G   ++    +T+      V   S
Sbjct: 1  MLRSMYSGVSGMRGFQTKLDVIGNNIANVNTVGFKSGRVMFKDIMSQTVSGVTAPVDGES 60

Query: 59 GGVRVKKIG 67
          GGV  K+IG
Sbjct: 61 GGVNAKQIG 69


>gi|302671950|ref|YP_003831910.1| flagellar basal-body rod protein FlgG2 [Butyrivibrio
           proteoclasticus B316]
 gi|302396423|gb|ADL35328.1| flagellar basal-body rod protein FlgG2 [Butyrivibrio
           proteoclasticus B316]
          Length = 277

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT-TTLDLLR 133
           SG ++  NV+V+ E  +M  T R Y  N + I    D +      + +
Sbjct: 229 SGFLEQSNVSVVDEMVNMIATQRNYDTNQRMITTIDDTLQIAANQIGK 276


>gi|209773380|gb|ACI85002.1| flagellar hook protein FlgE [Escherichia coli]
          Length = 401

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|240144761|ref|ZP_04743362.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis
           L1-82]
 gi|257203282|gb|EEV01567.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis
           L1-82]
 gi|291534609|emb|CBL07721.1| fagellar hook-basal body proteins [Roseburia intestinalis M50/1]
 gi|291540626|emb|CBL13737.1| fagellar hook-basal body proteins [Roseburia intestinalis XB6B4]
          Length = 264

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  N+NV+ E  +M   +R + A  + I    + +   ++
Sbjct: 216 QGCIESSNINVVSEMVNMITISRAFQAGQKVINAVDETLDKAVN 259


>gi|168764488|ref|ZP_02789495.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4501]
 gi|189365520|gb|EDU83936.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4501]
          Length = 401

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.065,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|170735956|ref|YP_001777216.1| flagellar basal body FlaE domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169818144|gb|ACA92726.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 414

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVN+  E  ++    R Y AN QTIK    +  T L+L
Sbjct: 375 SNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQTLLNL 413



 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPG 40
          SGLA  S+ + +I  NIANA T G   G
Sbjct: 8  SGLAGASSNLDVIGNNIANANTVGFKQG 35


>gi|325291962|ref|YP_004277826.1| Flagellar hook protein FlgE [Agrobacterium sp. H13-3]
 gi|325059815|gb|ADY63506.1| Flagellar hook protein FlgE [Agrobacterium sp. H13-3]
          Length = 426

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E  DM E+ R+Y AN +  +   D+M   ++L R
Sbjct: 379 QKGALEGSNVDIASELTDMIESQRIYTANSKVFQTGSDLMDVLINLKR 426



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          +  +     SG+  Q+ ++  + +NIANA TTG       Y+R + SF  +
Sbjct: 3  IFGTMRTGVSGMNAQANKLGTVGDNIANASTTG-------YKRASTSFSSL 46


>gi|313681187|ref|YP_004058925.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM
           16994]
 gi|313154047|gb|ADR32725.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM
           16994]
          Length = 445

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +SG ++  NV + V   DM    R Y AN +T+    +M+   L +
Sbjct: 398 SSGHLENSNVRMEVGLTDMIVMQRAYQANAKTVTTVDEMIQKALSM 443


>gi|331657138|ref|ZP_08358100.1| flagellar hook protein FlgE [Escherichia coli TA206]
 gi|331055386|gb|EGI27395.1| flagellar hook protein FlgE [Escherichia coli TA206]
          Length = 401

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|226327746|ref|ZP_03803264.1| hypothetical protein PROPEN_01619 [Proteus penneri ATCC 35198]
 gi|225203450|gb|EEG85804.1| hypothetical protein PROPEN_01619 [Proteus penneri ATCC 35198]
          Length = 406

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 365 EASNVDMSQELVNMIVAQRNYQSNAQTIKTQDQILQTLVSL 405



 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 10/63 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   +A +  I  NI+N+ T G       ++  ++SF +V  GSG   GV+V
Sbjct: 2  SFSQAVSGLNAAAANLDTIGNNISNSATYG-------FKGASVSFADVFAGSGAGLGVKV 54

Query: 64 KKI 66
            I
Sbjct: 55 AGI 57


>gi|163803169|ref|ZP_02197052.1| flagellar hook protein [Vibrio sp. AND4]
 gi|159173069|gb|EDP57902.1| flagellar hook protein [Vibrio sp. AND4]
          Length = 399

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S +IA SGL   +  +  IS NIANA T G   G          F  V +G   GGV V 
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGG-------RTEFAAVYNGMQPGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 SI 56



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NV++  E   +    R Y AN +TI  +  +    
Sbjct: 355 GALEGSNVDLTSELVALMTAQRNYQANAKTISTNDKLTQAL 395


>gi|187734244|ref|YP_001880752.1| flagellar hook protein FlgE [Shigella boydii CDC 3083-94]
 gi|187431236|gb|ACD10510.1| flagellar hook protein FlgE [Shigella boydii CDC 3083-94]
          Length = 402

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 37.2 bits (86), Expect = 0.81,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NI N+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIVNSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|157146226|ref|YP_001453545.1| flagellar hook protein FlgE [Citrobacter koseri ATCC BAA-895]
 gi|157083431|gb|ABV13109.1| hypothetical protein CKO_01983 [Citrobacter koseri ATCC BAA-895]
          Length = 401

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|94263288|ref|ZP_01287104.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|94267693|ref|ZP_01290962.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|94272297|ref|ZP_01292100.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93450173|gb|EAT01484.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93451895|gb|EAT02626.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456371|gb|EAT06495.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 243

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            G V+  NVN + E   M +  R Y A  + I+   +M
Sbjct: 194 QGYVEKSNVNSIEEMTAMIDLYRNYEAQQKMIQGIDEM 231



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +  Q  R+  ++ N+AN  T G       Y+R+  +F E+++ 
Sbjct: 16 MLGQERRLDQVANNLANVDTAG-------YKRQNTAFWEMLYN 51


>gi|332088750|gb|EGI93862.1| flagellar hook protein flgE [Shigella boydii 5216-82]
          Length = 401

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLYVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|331682578|ref|ZP_08383197.1| flagellar hook protein FlgE [Escherichia coli H299]
 gi|331080209|gb|EGI51388.1| flagellar hook protein FlgE [Escherichia coli H299]
          Length = 401

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|331672596|ref|ZP_08373385.1| flagellar hook protein FlgE [Escherichia coli TA280]
 gi|331070239|gb|EGI41605.1| flagellar hook protein FlgE [Escherichia coli TA280]
          Length = 401

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|331646334|ref|ZP_08347437.1| flagellar hook protein FlgE [Escherichia coli M605]
 gi|330910890|gb|EGH39400.1| flagellar hook protein FlgE [Escherichia coli AA86]
 gi|331045086|gb|EGI17213.1| flagellar hook protein FlgE [Escherichia coli M605]
          Length = 401

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|306814075|ref|ZP_07448248.1| flagellar hook protein FlgE [Escherichia coli NC101]
 gi|305852712|gb|EFM53160.1| flagellar hook protein FlgE [Escherichia coli NC101]
          Length = 401

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL V +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNVAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|218704484|ref|YP_002412003.1| flagellar hook protein FlgE [Escherichia coli UMN026]
 gi|293404360|ref|ZP_06648354.1| flgE [Escherichia coli FVEC1412]
 gi|298380140|ref|ZP_06989745.1| flagellar hook protein FlgE [Escherichia coli FVEC1302]
 gi|300899595|ref|ZP_07117834.1| flagellar hook protein FlgE [Escherichia coli MS 198-1]
 gi|218431581|emb|CAR12460.1| flagellar hook protein [Escherichia coli UMN026]
 gi|291428946|gb|EFF01971.1| flgE [Escherichia coli FVEC1412]
 gi|298279838|gb|EFI21346.1| flagellar hook protein FlgE [Escherichia coli FVEC1302]
 gi|300356866|gb|EFJ72736.1| flagellar hook protein FlgE [Escherichia coli MS 198-1]
          Length = 401

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|82544458|ref|YP_408405.1| flagellar hook protein FlgE [Shigella boydii Sb227]
 gi|81245869|gb|ABB66577.1| hook protein [Shigella boydii Sb227]
 gi|320186977|gb|EFW61690.1| Flagellar hook protein FlgE [Shigella flexneri CDC 796-83]
 gi|332094030|gb|EGI99082.1| flagellar hook protein flgE [Shigella boydii 3594-74]
          Length = 402

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 40.7 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|194432446|ref|ZP_03064733.1| flagellar hook protein FlgE [Shigella dysenteriae 1012]
 gi|194419333|gb|EDX35415.1| flagellar hook protein FlgE [Shigella dysenteriae 1012]
 gi|332092817|gb|EGI97885.1| flagellar hook protein flgE [Shigella dysenteriae 155-74]
          Length = 401

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|16129039|ref|NP_415594.1| flagellar hook protein [Escherichia coli str. K-12 substr. MG1655]
 gi|89107922|ref|AP_001702.1| flagellar hook protein [Escherichia coli str. K-12 substr. W3110]
 gi|170080727|ref|YP_001730047.1| flagellar hook protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188492271|ref|ZP_02999541.1| flagellar hook protein FlgE [Escherichia coli 53638]
 gi|238900330|ref|YP_002926126.1| flagellar hook protein [Escherichia coli BW2952]
 gi|256023226|ref|ZP_05437091.1| flagellar hook protein FlgE [Escherichia sp. 4_1_40B]
 gi|300950171|ref|ZP_07164116.1| flagellar hook protein FlgE [Escherichia coli MS 116-1]
 gi|300954384|ref|ZP_07166838.1| flagellar hook protein FlgE [Escherichia coli MS 175-1]
 gi|301029709|ref|ZP_07192763.1| flagellar hook protein FlgE [Escherichia coli MS 196-1]
 gi|301644988|ref|ZP_07244954.1| flagellar hook protein FlgE [Escherichia coli MS 146-1]
 gi|307137711|ref|ZP_07497067.1| flagellar hook protein FlgE [Escherichia coli H736]
 gi|331641620|ref|ZP_08342755.1| flagellar hook protein FlgE [Escherichia coli H736]
 gi|2494529|sp|P75937|FLGE_ECOLI RecName: Full=Flagellar hook protein flgE
 gi|1787316|gb|AAC74160.1| flagellar hook protein [Escherichia coli str. K-12 substr. MG1655]
 gi|85674830|dbj|BAA35885.2| flagellar hook protein [Escherichia coli str. K12 substr. W3110]
 gi|169888562|gb|ACB02269.1| flagellar hook protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188487470|gb|EDU62573.1| flagellar hook protein FlgE [Escherichia coli 53638]
 gi|238861108|gb|ACR63106.1| flagellar hook protein [Escherichia coli BW2952]
 gi|260449784|gb|ACX40206.1| flagellar basal body FlaE domain protein [Escherichia coli DH1]
 gi|299877397|gb|EFI85608.1| flagellar hook protein FlgE [Escherichia coli MS 196-1]
 gi|300318620|gb|EFJ68404.1| flagellar hook protein FlgE [Escherichia coli MS 175-1]
 gi|300450518|gb|EFK14138.1| flagellar hook protein FlgE [Escherichia coli MS 116-1]
 gi|301076717|gb|EFK91523.1| flagellar hook protein FlgE [Escherichia coli MS 146-1]
 gi|309701348|emb|CBJ00649.1| flagellar hook protein FlgE [Escherichia coli ETEC H10407]
 gi|315135708|dbj|BAJ42867.1| flagellar hook protein FlgE [Escherichia coli DH1]
 gi|315618246|gb|EFU98836.1| flagellar hook protein flgE [Escherichia coli 3431]
 gi|323937816|gb|EGB34080.1| fagellar hook-basal body protein [Escherichia coli E1520]
 gi|323942545|gb|EGB38712.1| fagellar hook-basal body protein [Escherichia coli E482]
 gi|331038418|gb|EGI10638.1| flagellar hook protein FlgE [Escherichia coli H736]
 gi|332342622|gb|AEE55956.1| flagellar hook protein FlgE [Escherichia coli UMNK88]
          Length = 402

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|315296707|gb|EFU56002.1| flagellar hook protein FlgE [Escherichia coli MS 16-3]
 gi|320196442|gb|EFW71065.1| Flagellar hook protein FlgE [Escherichia coli WV_060327]
          Length = 401

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|87306343|ref|ZP_01088490.1| flagellar hook basal body protein flgG [Blastopirellula marina DSM
           3645]
 gi|87290522|gb|EAQ82409.1| flagellar hook basal body protein flgG [Blastopirellula marina DSM
           3645]
          Length = 266

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 5/52 (9%)

Query: 80  GHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G+P  +       G ++  NV  + E  D+  T R +  N QT++    ++ 
Sbjct: 208 GNPNIDGFGSVEKGFLEASNVEPVQELVDLITTQRAFELNSQTVQAGDQILQ 259



 Score = 40.3 bits (94), Expect = 0.081,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A +G+     ++ +IS N+AN  TT        +++  I+FE++ + +
Sbjct: 9  AATGMQTLQTKLDVISNNLANVNTTA-------FKKDRINFEDLFYDN 49


>gi|325474542|gb|EGC77728.1| flagellar hook protein FlgE [Treponema denticola F0402]
          Length = 463

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  +  DM  T + + A  +TI+ S  M+ T L+L R
Sbjct: 418 GTLEMSNVDLTDQFVDMIVTQKGFQAGAKTIQTSDTMLETVLNLKR 463



 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 11/54 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L +      +G+     RM +I  N+AN  TTG       ++R  ++F+++
Sbjct: 2  MRSLFSGV----TGMQNHQTRMDVIGNNVANVNTTG-------FKRGRVNFQDL 44


>gi|310641552|ref|YP_003946310.1| fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
 gi|309246502|gb|ADO56069.1| Fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
          Length = 272

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 223 AIISGQLEMSNVDLTGEFTEMIVAQRGFQANSRIITTSDEVLQEVVNLKR 272



 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++ S +   SG+     ++ +I  NIAN  TTG       ++   + F++++  + 
Sbjct: 1  MLRSMYSGVSGMKGFQTKLDVIGNNIANVNTTG-------FKSSRVMFKDILSQTS 49


>gi|42528268|ref|NP_973366.1| flagellar hook protein FlgE [Treponema denticola ATCC 35405]
 gi|4426943|gb|AAD20617.1| flagellar hook protein FlgE [Treponema denticola]
 gi|41819538|gb|AAS13285.1| flagellar hook protein FlgE [Treponema denticola ATCC 35405]
          Length = 463

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  +  DM  T + + A  +TI+ S  M+ T L+L R
Sbjct: 418 GTLEMSNVDLTDQFVDMIVTQKGFQAGAKTIQTSDTMLETVLNLKR 463



 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 11/54 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L +      +G+     RM +I  N+AN  TTG       ++R  ++F+++
Sbjct: 2  MRSLFSGV----TGMQNHQTRMDVIGNNVANVNTTG-------FKRGRVNFQDL 44


>gi|107026757|ref|YP_624268.1| flagellar hook protein FlgE [Burkholderia cenocepacia AU 1054]
 gi|116692051|ref|YP_837584.1| flagellar hook protein FlgE [Burkholderia cenocepacia HI2424]
 gi|105896131|gb|ABF79295.1| flagellar basal body FlaE [Burkholderia cenocepacia AU 1054]
 gi|116650051|gb|ABK10691.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 414

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVN+  E  ++    R Y AN QTIK    +  T L+L
Sbjct: 375 SNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQTLLNL 413



 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPG 40
          SGLA  S+ + +I  NIANA T G   G
Sbjct: 8  SGLAGASSNLDVIGNNIANANTVGFKQG 35


>gi|307310146|ref|ZP_07589796.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|306909864|gb|EFN40358.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|315060354|gb|ADT74681.1| flagellar hook protein [Escherichia coli W]
 gi|320200972|gb|EFW75556.1| Flagellar hook protein FlgE [Escherichia coli EC4100B]
 gi|323379085|gb|ADX51353.1| fagellar hook-basal body protein [Escherichia coli KO11]
          Length = 402

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|307731363|ref|YP_003908587.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1003]
 gi|307585898|gb|ADN59296.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1003]
          Length = 502

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G V+  NV++  +  D+    R Y AN QTIK    +  T ++L
Sbjct: 459 GAVENSNVDLTSQLVDLITAQRNYQANAQTIKTQQTVDQTLINL 502


>gi|149203100|ref|ZP_01880071.1| flagellar hook protein FlgE, putative [Roseovarius sp. TM1035]
 gi|149143646|gb|EDM31682.1| flagellar hook protein FlgE, putative [Roseovarius sp. TM1035]
          Length = 433

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 22/38 (57%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E  DM +T R Y +N + I+   +M+  T +++R
Sbjct: 396 DVAGELTDMIQTQRAYSSNAKVIQTVDEMLQETTNIIR 433



 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 14/66 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          + +S + + +GL   + R+  IS+NIAN+ T G       YRR    FE V+       +
Sbjct: 3  ISSSLNASVAGLNANATRLATISDNIANSSTFG-------YRRVEADFESVVIAGRGGSY 55

Query: 57 GSGGVR 62
           +GGVR
Sbjct: 56 AAGGVR 61


>gi|27381969|ref|NP_773498.1| flagellar hook protein FlgE [Bradyrhizobium japonicum USDA 110]
 gi|27355139|dbj|BAC52123.1| flagellar hook protein [Bradyrhizobium japonicum USDA 110]
          Length = 410

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          L        SG++ QS ++  +S+NIAN  TTG       Y+R +  F  ++  SG
Sbjct: 3  LYGVMRTGVSGMSAQSNKLSTVSDNIANVNTTG-------YKRASTEFSSLILKSG 51



 Score = 39.1 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E   M E  R + AN ++ +   D++   ++L R
Sbjct: 363 QSGALEDSNVDLADELTGMIEAQRGFTANSKSFQTGADLLDVVVNLKR 410


>gi|227328338|ref|ZP_03832362.1| flagellar hook protein FlgE [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 400

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 361 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQTLVSL 399



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S  + +I  NIAN+ T G       ++  T++F ++  GS    GV+V  + 
Sbjct: 6  AVSGLNAASNNLDVIGNNIANSATVG-------FKSGTVTFADMFAGSKVGMGVKVASVL 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|149184209|ref|ZP_01862527.1| Flagellar basal-body rod FlgG [Erythrobacter sp. SD-21]
 gi|148831529|gb|EDL49962.1| Flagellar basal-body rod FlgG [Erythrobacter sp. SD-21]
          Length = 243

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G+++  NVN++ E  +M E  R Y  + + I    +M+   
Sbjct: 198 QGMLESSNVNIVEELVEMIECQRAYEISSKMISAVDEMLRNA 239


>gi|291536012|emb|CBL09124.1| fagellar hook-basal body proteins [Roseburia intestinalis M50/1]
          Length = 551

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 20/77 (25%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
          ++ S + A SGL     +M +I  NIAN  T         ++  ++ F++V++       
Sbjct: 1  MMRSMYSAVSGLKTHQTKMDVIGNNIANVNTVA-------FKSSSVVFQDVLYQMTSNAS 53

Query: 57 ------GSGGVRVKKIG 67
                G+GGV  K+IG
Sbjct: 54 GANAATGTGGVNAKQIG 70



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E   M  T R + AN + I  S  ++   ++L R
Sbjct: 505 SGELEMSNVDLSTEFTQMIITQRGFQANSRIITTSDTLLEELVNLKR 551


>gi|289523565|ref|ZP_06440419.1| flagellar hook protein FlgE [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503257|gb|EFD24421.1| flagellar hook protein FlgE [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 618

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV++  E + +    R + AN + I  S  ++   ++L R
Sbjct: 571 AGGNLEMANVDLAEEFSRLIIAQRGFQANARVITTSDQVLDELINLKR 618


>gi|238755324|ref|ZP_04616667.1| Flagellar hook protein FlgE [Yersinia ruckeri ATCC 29473]
 gi|238706460|gb|EEP98834.1| Flagellar hook protein FlgE [Yersinia ruckeri ATCC 29473]
          Length = 427

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 388 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVNL 426



 Score = 43.4 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NIAN+ T+G   GS       +SF ++  GS    GV+V  I 
Sbjct: 6  AVSGLNAASSNLDVIGNNIANSATSGFKSGS-------VSFADMFAGSQTGMGVKVAGIT 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|218689029|ref|YP_002397241.1| flagellar hook protein FlgE [Escherichia coli ED1a]
 gi|218426593|emb|CAR07421.1| flagellar hook protein [Escherichia coli ED1a]
          Length = 401

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|82777309|ref|YP_403658.1| flagellar hook protein FlgE [Shigella dysenteriae Sd197]
 gi|309788143|ref|ZP_07682749.1| flagellar hook protein flgE [Shigella dysenteriae 1617]
 gi|81241457|gb|ABB62167.1| hook protein [Shigella dysenteriae Sd197]
 gi|308923995|gb|EFP69496.1| flagellar hook protein flgE [Shigella dysenteriae 1617]
          Length = 402

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|222032829|emb|CAP75568.1| flagellar hook protein flgE [Escherichia coli LF82]
 gi|312945638|gb|ADR26465.1| flagellar hook protein FlgE [Escherichia coli O83:H1 str. NRG 857C]
          Length = 401

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|217976240|ref|YP_002360387.1| flagellar hook protein FlgE [Methylocella silvestris BL2]
 gi|217501616|gb|ACK49025.1| flagellar basal body FlaE domain protein [Methylocella silvestris
          BL2]
          Length = 414

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          L ++   + SG+A Q+ ++  +S+NIAN+ TTG       Y++    FE ++  +G
Sbjct: 3  LFSALTASVSGMAAQANKLSTVSDNIANSDTTG-------YKQAMTEFENLISQAG 51



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 21/41 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  +  DM    R Y +N +  +   ++++T  ++L+
Sbjct: 374 STVDLASQLTDMIVAQRSYESNSKVFQTGSELLSTLNNMLK 414


>gi|110641252|ref|YP_668982.1| flagellar hook protein FlgE [Escherichia coli 536]
 gi|191172366|ref|ZP_03033907.1| flagellar hook protein FlgE [Escherichia coli F11]
 gi|300982621|ref|ZP_07176205.1| flagellar hook protein FlgE [Escherichia coli MS 200-1]
 gi|110342844|gb|ABG69081.1| flagellar hook protein FlgE [Escherichia coli 536]
 gi|190907250|gb|EDV66848.1| flagellar hook protein FlgE [Escherichia coli F11]
 gi|300307086|gb|EFJ61606.1| flagellar hook protein FlgE [Escherichia coli MS 200-1]
 gi|324013350|gb|EGB82569.1| flagellar hook protein FlgE [Escherichia coli MS 60-1]
          Length = 401

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL V +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNVAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|296102908|ref|YP_003613054.1| flagellar hook protein FlgE [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057367|gb|ADF62105.1| flagellar hook protein FlgE [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 402

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 40.3 bits (94), Expect = 0.095,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G   GS        SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGS-------ASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|331662482|ref|ZP_08363405.1| flagellar hook protein FlgE [Escherichia coli TA143]
 gi|284920899|emb|CBG33962.1| flagellar hook protein FlgE [Escherichia coli 042]
 gi|331060904|gb|EGI32868.1| flagellar hook protein FlgE [Escherichia coli TA143]
          Length = 402

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 40.7 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|297570291|ref|YP_003691635.1| flagellar basal-body rod protein FlgG [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296926206|gb|ADH87016.1| flagellar basal-body rod protein FlgG [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 260

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 78  DP--GHPVANASG-----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           DP    P  + +G      ++  NV+V  E  ++  T R +  N ++++ +  ++     
Sbjct: 198 DPIESDPGTDGAGVILQNFIEVSNVDVTEELVNLIITQRAFEMNSKSVQTADQLLEVANT 257

Query: 131 LLR 133
           L R
Sbjct: 258 LKR 260



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 10/63 (15%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKKIGV 68
           +G+  Q  ++  IS N+AN  T G       +++  + FE++ +    + GV     G 
Sbjct: 9  TTGMRGQQLQLDTISNNLANVNTAG-------FKKSRVQFEDLYYQEMRAVGVETVDGGQ 61

Query: 69 DQS 71
            S
Sbjct: 62 VPS 64


>gi|187478185|ref|YP_786209.1| flagellar hook protein [Bordetella avium 197N]
 gi|115422771|emb|CAJ49299.1| flagellar hook protein [Bordetella avium 197N]
          Length = 406

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV +  E  +M    R Y AN QTIK   +++   +++
Sbjct: 365 EQSNVEMSQELVNMIVAQRTYQANAQTIKTQDEVLQVLINM 405



 Score = 37.6 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 10/57 (17%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKI 66
          SGL   S  + +I  NIAN+ T G   GS        SF +V   S    GV+V  +
Sbjct: 8  SGLQAASQNLDVIGNNIANSGTIGFKSGST-------SFADVYANSRVGLGVKVAAV 57


>gi|114777402|ref|ZP_01452399.1| hypothetical protein SPV1_13919 [Mariprofundus ferrooxydans PV-1]
 gi|114552184|gb|EAU54686.1| hypothetical protein SPV1_13919 [Mariprofundus ferrooxydans PV-1]
          Length = 467

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   +    R Y AN +TI  +  M+++ + L R
Sbjct: 425 EQSNVDLAAEFVKLIVVQRGYEANSKTILTTDQMLSSLMQLKR 467



 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 7/50 (14%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           SGL      ++++ +NIAN  + G       ++ +++SF +V+  + GV
Sbjct: 11 ASGLTSFGEAVRVVGDNIANVNSIG-------FKSQSVSFTDVLSQTIGV 53


>gi|301631988|ref|XP_002945073.1| PREDICTED: flagellar basal-body rod protein flgF-like [Xenopus
           (Silurana) tropicalis]
          Length = 430

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            NV++  E  +M    R Y +N QTIK    +++T 
Sbjct: 163 SNVDLTAELVNMMTAQRAYQSNAQTIKTQDQVISTL 198



 Score = 38.0 bits (88), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           S      DP    A  SG ++  NVN +     M    R +   ++ ++ +     +   
Sbjct: 367 SGAPLAQDPN--AALLSGALEGSNVNAVESMVGMIAAARQFEQQMRLLQTAESGDKSAAQ 424

Query: 131 LL 132
           LL
Sbjct: 425 LL 426



 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 7/54 (12%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          S     SGL   S  + +I  NIAN+ T G       ++     F+E++  + G
Sbjct: 2  SFQQGLSGLTAASKNLDVIGHNIANSGTVG-------FKASRTEFDEMVASAIG 48


>gi|163750569|ref|ZP_02157807.1| flagellar basal-body rod protein FlgF [Shewanella benthica KT99]
 gi|161329724|gb|EDQ00713.1| flagellar basal-body rod protein FlgF [Shewanella benthica KT99]
          Length = 246

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   +    R +   ++ +K + +M   +  L+R
Sbjct: 198 ESGAVEGSNVNAVSEMVALISIQRQFEMQVKMMKTAEEMDKASSALMR 245


>gi|156934440|ref|YP_001438356.1| flagellar hook protein FlgE [Cronobacter sakazakii ATCC BAA-894]
 gi|156532694|gb|ABU77520.1| hypothetical protein ESA_02271 [Cronobacter sakazakii ATCC BAA-894]
          Length = 409

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 364 SGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 408



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   S  + +I  NIAN+ T G   GS       +SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAASTNLDVIGNNIANSATYGFKSGS-------VSFADMFAGSKAGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|152965624|ref|YP_001361408.1| hypothetical protein Krad_1658 [Kineococcus radiotolerans SRS30216]
 gi|151360141|gb|ABS03144.1| protein of unknown function DUF1078 domain protein [Kineococcus
           radiotolerans SRS30216]
          Length = 462

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E  ++    R + AN + I  S +++   ++L R
Sbjct: 416 AGSLEMSNVDLSAEFTNLILAQRGFQANSKVITSSDELLQDLVNLKR 462



 Score = 36.8 bits (85), Expect = 0.90,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S     SGL      M ++  NIAN  T G       ++  ++ F + +
Sbjct: 1  MLRSMFSGVSGLRSHQTMMDVVGNNIANVNTAG-------FKSSSVVFADTL 45


>gi|157160603|ref|YP_001457921.1| flagellar hook protein FlgE [Escherichia coli HS]
 gi|170020528|ref|YP_001725482.1| flagellar hook protein FlgE [Escherichia coli ATCC 8739]
 gi|312971213|ref|ZP_07785391.1| flagellar hook protein flgE [Escherichia coli 1827-70]
 gi|157066283|gb|ABV05538.1| flagellar hook protein FlgE [Escherichia coli HS]
 gi|169755456|gb|ACA78155.1| flagellar basal body FlaE domain protein [Escherichia coli ATCC
           8739]
 gi|310336415|gb|EFQ01601.1| flagellar hook protein flgE [Escherichia coli 1827-70]
          Length = 402

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 40.7 bits (95), Expect = 0.073,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|91210228|ref|YP_540214.1| flagellar hook protein FlgE [Escherichia coli UTI89]
 gi|117623262|ref|YP_852175.1| flagellar hook protein FlgE [Escherichia coli APEC O1]
 gi|215486285|ref|YP_002328716.1| flagellar hook protein FlgE [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218557958|ref|YP_002390871.1| flagellar hook protein FlgE [Escherichia coli S88]
 gi|237706938|ref|ZP_04537419.1| flagellar hook protein FlgE [Escherichia sp. 3_2_53FAA]
 gi|312968850|ref|ZP_07783057.1| flagellar hook protein flgE [Escherichia coli 2362-75]
 gi|91071802|gb|ABE06683.1| flagellar biosynthesis, hook protein [Escherichia coli UTI89]
 gi|115512386|gb|ABJ00461.1| flagellar biosynthesis, hook protein FlgE [Escherichia coli APEC
           O1]
 gi|215264357|emb|CAS08714.1| flagellar hook protein [Escherichia coli O127:H6 str. E2348/69]
 gi|218364727|emb|CAR02417.1| flagellar hook protein [Escherichia coli S88]
 gi|226898148|gb|EEH84407.1| flagellar hook protein FlgE [Escherichia sp. 3_2_53FAA]
 gi|294491293|gb|ADE90049.1| flagellar hook protein FlgE [Escherichia coli IHE3034]
 gi|307627454|gb|ADN71758.1| flagellar hook protein FlgE [Escherichia coli UM146]
 gi|312286252|gb|EFR14165.1| flagellar hook protein flgE [Escherichia coli 2362-75]
 gi|315287369|gb|EFU46780.1| flagellar hook protein FlgE [Escherichia coli MS 110-3]
 gi|323953238|gb|EGB49104.1| fagellar hook-basal body protein [Escherichia coli H252]
 gi|323957900|gb|EGB53612.1| fagellar hook-basal body protein [Escherichia coli H263]
          Length = 401

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|127512279|ref|YP_001093476.1| flagellar hook protein FlgE [Shewanella loihica PV-4]
 gi|126637574|gb|ABO23217.1| flagellar basal body FlaE domain protein [Shewanella loihica PV-4]
          Length = 453

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 5/66 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVR 62
          S +IA SG+A     +   + NIAN  TTG        +D Y   +I         GGV 
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNTTGFKESRAEFADVY-ASSIFANSKTTVGGGVT 60

Query: 63 VKKIGV 68
            ++  
Sbjct: 61 TAQVAQ 66


>gi|320173529|gb|EFW48725.1| Flagellar hook protein FlgE [Shigella dysenteriae CDC 74-1112]
          Length = 402

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|315929129|gb|EFV08356.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 250

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 10/65 (15%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G+ G  V  I                     G ++  NV ++ E  D+    R Y A  +
Sbjct: 196 GASGAPVAGIAGQDGLGTIRH----------GFIELSNVQLVEEMTDLITGQRAYEAGSK 245

Query: 117 TIKQS 121
            I  S
Sbjct: 246 AITTS 250



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 10/70 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
          + S H A +G+  Q  ++ + S NIAN  T G       +++    F ++M+      G 
Sbjct: 1  MRSLHTAATGMVAQQTQIDVTSNNIANVNTAG-------FKKSRAEFADLMYQVMKYAGT 53

Query: 62 RVKKIGVDQS 71
                +  S
Sbjct: 54 STSATTLSPS 63


>gi|331652129|ref|ZP_08353148.1| flagellar hook protein FlgE [Escherichia coli M718]
 gi|331050407|gb|EGI22465.1| flagellar hook protein FlgE [Escherichia coli M718]
          Length = 402

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|303248690|ref|ZP_07334944.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ]
 gi|302489946|gb|EFL49872.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ]
          Length = 549

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV++  E   M  T R +  N +TI     M++  + L R
Sbjct: 509 SNVDMAAEMVSMIVTQRGFEGNSKTITTVDTMLSEIIQLKR 549



 Score = 34.1 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGSGGVRVKKIGV 68
          SGL   S +M  I  N+AN  T G       +         +   V     GVRV  +  
Sbjct: 14 SGLMANSTKMTSIGNNLANVNTYGFKSARTDFVTLMSATIGTASGVDQVGRGVRVGSVVT 73

Query: 69 DQS 71
          D S
Sbjct: 74 DYS 76


>gi|293409442|ref|ZP_06653018.1| flgE [Escherichia coli B354]
 gi|291469910|gb|EFF12394.1| flgE [Escherichia coli B354]
          Length = 401

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|329888226|ref|ZP_08266824.1| flagellar basal-body rod protein FlgG [Brevundimonas diminuta
          ATCC 11568]
 gi|328846782|gb|EGF96344.1| flagellar basal-body rod protein FlgG [Brevundimonas diminuta
          ATCC 11568]
          Length = 262

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +   A +G+A Q   +++IS NIAN  T G       ++R+   F+++++ +
Sbjct: 1  MRALRTAATGMAAQQLNVEVISNNIANMNTVG-------FKRQRAEFQDLLYQN 47



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 17/38 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             +  NV+ + E   +    R Y  N + I  + +M++
Sbjct: 218 YTEASNVDAVSEITALIVAQRAYEMNSKVITTADEMLS 255


>gi|227112521|ref|ZP_03826177.1| flagellar hook protein FlgE [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 400

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 361 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQTLVSL 399



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S  + +I  NIAN+ T G       ++  T++F ++  GS    GV+V  + 
Sbjct: 6  AVSGLNAASNNLDVIGNNIANSATVG-------FKSGTVTFADMFAGSKVGMGVKVASVL 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|261339376|ref|ZP_05967234.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
 gi|288318177|gb|EFC57115.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
          Length = 402

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G   GS        SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGS-------ASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|149908759|ref|ZP_01897420.1| flagellar hook protein [Moritella sp. PE36]
 gi|149808301|gb|EDM68240.1| flagellar hook protein [Moritella sp. PE36]
          Length = 437

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           SG  +  NV++  E   +    R Y AN +TI  +  M  
Sbjct: 392 SGAYEGSNVDLTGELVSLMTAQRNYQANSKTISAAEKMTQ 431



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S  I  SGL   + ++ +IS+NIAN  T+G       ++     F  V  G  +GGV V 
Sbjct: 2  SYSIGLSGLRSTNEQLNVISQNIANVNTSG-------FKSGRAEFSSVYSGGSAGGVEVA 54

Query: 65 KI 66
           I
Sbjct: 55 AI 56


>gi|157961171|ref|YP_001501205.1| flagellar hook protein FlgE [Shewanella pealeana ATCC 700345]
 gi|157846171|gb|ABV86670.1| flagellar basal body FlaE domain protein [Shewanella pealeana ATCC
           700345]
          Length = 453

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 5/66 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVR 62
          S +IA SG++     +   + NIAN  TTG        +D Y   +I         GGV 
Sbjct: 2  SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVY-ASSIFANSKTTVGGGVA 60

Query: 63 VKKIGV 68
            ++  
Sbjct: 61 TSQVAQ 66


>gi|170725955|ref|YP_001759981.1| flagellar hook protein FlgE [Shewanella woodyi ATCC 51908]
 gi|169811302|gb|ACA85886.1| flagellar basal body FlaE domain protein [Shewanella woodyi ATCC
           51908]
          Length = 453

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +IA SG++     +   + NIAN  + G
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANVNSIG 31


>gi|153011508|ref|YP_001372722.1| flagellar hook protein FlgE [Ochrobactrum anthropi ATCC 49188]
 gi|151563396|gb|ABS16893.1| flagellar basal body FlaE domain protein [Ochrobactrum anthropi
           ATCC 49188]
          Length = 426

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 16/95 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR- 62
           L        SG+  Q+ R+  +++NIANA T G       Y+R    F  ++  S G + 
Sbjct: 32  LYGMMRTGVSGMNAQANRLSAVADNIANASTVG-------YKRAETQFSSLVLPSTGGQY 84

Query: 63  --------VKKIGVDQSTFVEEFDPGHPVANASGI 89
                   V+    DQ              + +G 
Sbjct: 85  NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGY 119



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 82  PVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P ++  G V     +  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 370 PQSDGMGKVMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 426


>gi|148558720|ref|YP_001258004.1| flagellar hook protein FlgE [Brucella ovis ATCC 25840]
 gi|148370005|gb|ABQ62877.1| flagellar hook protein FlgE [Brucella ovis ATCC 25840]
          Length = 377

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 8/58 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-VMHGSGG 60
          L        SG+  Q+ R+  +++NIANA T G       Y+R    F   V+  + G
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAG 53



 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 331 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 377


>gi|157376216|ref|YP_001474816.1| flagellar hook protein FlgE [Shewanella sediminis HAW-EB3]
 gi|157318590|gb|ABV37688.1| flagellar basal body FlaE domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 454

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 413 EQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 453



 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 6/58 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGG 60
          S +IA SG+A     +   + NIAN  + G        +D Y      F     G GG
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFADVYA--NSIFANSKTGVGG 57


>gi|254519414|ref|ZP_05131470.1| flagellar hook protein [Clostridium sp. 7_2_43FAA]
 gi|226913163|gb|EEH98364.1| flagellar hook protein [Clostridium sp. 7_2_43FAA]
          Length = 885

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 26/49 (53%)

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N  G+++  NV++  +  DM  ++R + A  + I    +++   ++L R
Sbjct: 837 NLQGMLEMSNVDLSEQFTDMIVSSRAFQAAGKMITTGDEILQDIINLKR 885



 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 18/76 (23%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------- 55
          +++ S +   SG+ V   ++ +I  NI+N  TT        ++     F +++       
Sbjct: 6  FMLRSMYSGISGMKVNQTKLDVIGNNISNVGTTS-------FKSSRARFSDMLSQNVSDA 58

Query: 56 ----HGSGGVRVKKIG 67
              +  GGV   ++G
Sbjct: 59 MAPSNNQGGVNASQVG 74


>gi|149189842|ref|ZP_01868122.1| putative flagellar hook-associated protein [Vibrio shilonii AK1]
 gi|148836328|gb|EDL53285.1| putative flagellar hook-associated protein [Vibrio shilonii AK1]
          Length = 457

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 14/67 (20%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SGGV 61
          +IA SG+      + + ++N+AN  T G       Y R+      +  G         GV
Sbjct: 5  NIALSGMNANRVALDVTAQNVANINTPG-------YSRQQAVMASLAGGKYDKTNPGMGV 57

Query: 62 RVKKIGV 68
           V  I  
Sbjct: 58 EVTSIRR 64


>gi|260597445|ref|YP_003210016.1| flagellar hook protein FlgE [Cronobacter turicensis z3032]
 gi|260216622|emb|CBA29917.1| Flagellar hook protein flgE [Cronobacter turicensis z3032]
          Length = 410

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 365 SGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 409



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   S  + +I  NIAN+ T G   GS       +SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAASTNLDVIGNNIANSATYGFKSGS-------VSFADMFAGSKAGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|148270379|ref|YP_001244839.1| hypothetical protein Tpet_1249 [Thermotoga petrophila RKU-1]
 gi|147735923|gb|ABQ47263.1| protein of unknown function DUF1078 domain protein [Thermotoga
           petrophila RKU-1]
          Length = 249

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G V+  NV+ L    DM    R Y  + + +  + ++    ++
Sbjct: 200 QGYVEKSNVDALKAMVDMISAMRHYELSQRAVTVNDELNGKLIN 243



 Score = 34.5 bits (79), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR--KTISFEEVMHGSGGVRVKKIGV 68
          A  G+ V  A++  I+ ++AN  T G     + +R   +   F +        R KK+ +
Sbjct: 8  AAMGMLVDMAKLDRIANDLANVDTAGYKQDREAFRAYLRREVFRQEPDPVES-RTKKVPI 66

Query: 69 DQSTFVEEFD 78
              +    D
Sbjct: 67 GPLEYATVLD 76


>gi|297538896|ref|YP_003674665.1| fagellar hook-basal body protein [Methylotenera sp. 301]
 gi|297258243|gb|ADI30088.1| fagellar hook-basal body protein [Methylotenera sp. 301]
          Length = 422

 Score = 47.2 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  N ++  E  +M    R Y AN QTIK    ++ T ++L
Sbjct: 380 VEDSNTDLTAELVNMITAQRYYQANAQTIKTQDQVLQTLVNL 421



 Score = 36.8 bits (85), Expect = 0.92,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S     SGL   S ++++I  N+ANA T G
Sbjct: 2  SFQQGLSGLNAASKQLEVIGNNVANANTVG 31


>gi|146311246|ref|YP_001176320.1| flagellar hook protein FlgE [Enterobacter sp. 638]
 gi|145318122|gb|ABP60269.1| flagellar basal body FlaE domain protein [Enterobacter sp. 638]
          Length = 404

 Score = 47.2 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 359 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 403



 Score = 40.3 bits (94), Expect = 0.084,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKIGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|259417834|ref|ZP_05741753.1| flagellar hook protein FlgE [Silicibacter sp. TrichCH4B]
 gi|259346740|gb|EEW58554.1| flagellar hook protein FlgE [Silicibacter sp. TrichCH4B]
          Length = 422

 Score = 47.2 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 14/69 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          + +S +   +GLA  S R+  IS+NIANA T G       Y+R   SFE ++       +
Sbjct: 3  ISSSLNAGVAGLAANSTRLAAISDNIANASTAG-------YKRVVTSFESMVISQNGGSY 55

Query: 57 GSGGVRVKK 65
           +GGV V  
Sbjct: 56 AAGGVSVNN 64



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E   M +T R Y +N + I+   +M+  T ++ R
Sbjct: 385 DVATELTSMIQTQRAYSSNAKVIQTVDEMLQETTNIKR 422


>gi|83594174|ref|YP_427926.1| hypothetical protein Rru_A2842 [Rhodospirillum rubrum ATCC 11170]
 gi|83577088|gb|ABC23639.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 245

 Score = 47.2 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 11/85 (12%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN---ASG 88
           A  T  T      + + +SFE+        R+     D           +P+       G
Sbjct: 146 ATGTVSTENGPVGKLRLVSFEDEQKLR---RIGGGLFDSGD-----QQANPITEPRIEQG 197

Query: 89  IVKYPNVNVLVETADMRETNRLYMA 113
           +++  NVN +VE   M +  R Y A
Sbjct: 198 MIEKSNVNPVVEMTRMIQVQRSYEA 222


>gi|319409192|emb|CBI82836.1| Flagellar basal-body rod protein flgF [Bartonella schoenbuchensis
           R1]
          Length = 244

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVN + E   + E +R +      ++Q  +M + ++ +L
Sbjct: 195 QGYIESSNVNGVSEMTRLIEVSRAFERVEAMLRQQEEMRSKSIQIL 240



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 10/47 (21%)

Query: 21 RMQIISENIANARTTGDTPGSDPY----------RRKTISFEEVMHG 57
          RM+ I++N+AN  T G   G   +          +R  + F     G
Sbjct: 18 RMETIAQNMANVNTPGFRAGGMKFDTLVSPVAREQRDQVVFASAGKG 64


>gi|269792949|ref|YP_003317853.1| flagellar basal-body rod protein FlgB [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100584|gb|ACZ19571.1| flagellar basal-body rod protein FlgB [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 134

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 34/133 (25%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST--FVEE 76
           S RM  +++N+ANA T         Y R+ +SFE+ +            +DQ     +  
Sbjct: 18  SRRMGAVAQNVANANTPR-------YARREVSFEDQLAA---------VIDQPRRLPLAV 61

Query: 77  FDPGH------------PVAN--ASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQ 120
            D  H            P  +     I +Y   NV+  VE A + ET  +Y A  + + +
Sbjct: 62  SDQRHMTNVPLGLDNVKPREDRVEDEIYRYDGNNVDPEVEMAKLAETRMMYQAMSRVLSR 121

Query: 121 SHDMMTTTLDLLR 133
              M  T +   R
Sbjct: 122 KVAMYRTAIGGGR 134


>gi|182418417|ref|ZP_02949711.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521]
 gi|237666503|ref|ZP_04526488.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377799|gb|EDT75343.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521]
 gi|237657702|gb|EEP55257.1| flagellar basal-body rod protein FlgG [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 379

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A+ + I    +++ T   L+R
Sbjct: 333 QGCLEASNVDLTEQFTDMITATRSFQASSKMITTGDEILQTITGLMR 379



 Score = 41.5 bits (97), Expect = 0.046,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 7/52 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          SG+ V   ++ +I  NIAN  TT        ++     F ++++ + GV   
Sbjct: 10 SGMKVNQQKLDVIGNNIANVGTTA-------FKSSRAEFSDMLYQNAGVATS 54


>gi|238793998|ref|ZP_04637616.1| Flagellar hook protein FlgE [Yersinia intermedia ATCC 29909]
 gi|238726630|gb|EEQ18166.1| Flagellar hook protein FlgE [Yersinia intermedia ATCC 29909]
          Length = 425

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 386 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVNL 424



 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS    GV+V  I 
Sbjct: 6  AVSGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGIT 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|323975930|gb|EGB71024.1| fagellar hook-basal body protein [Escherichia coli TW10509]
          Length = 400

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS   GV V 
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 65 KIGVD 69
               
Sbjct: 55 GTAQS 59


>gi|119503644|ref|ZP_01625727.1| flagellar hook protein [marine gamma proteobacterium HTCC2080]
 gi|119460706|gb|EAW41798.1| flagellar hook protein [marine gamma proteobacterium HTCC2080]
          Length = 410

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  ++    R + AN Q I          ++L
Sbjct: 368 VEQANVDITQELVNLIVAQRNFQANAQVISTEDQATQAVINL 409



 Score = 41.1 bits (96), Expect = 0.056,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 15/68 (22%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------HGS 58
          +   A SG+    A + +IS NIANA T G       ++     F E+         +  
Sbjct: 2  AFSTAISGIKAAQANLDVISNNIANASTVG-------FKASRAQFAEIYASSVSGGSNAG 54

Query: 59 GGVRVKKI 66
           GV + +I
Sbjct: 55 QGVELTEI 62


>gi|229172390|ref|ZP_04299949.1| Flagellar basal-body rod protein [Bacillus cereus MM3]
 gi|228610861|gb|EEK68124.1| Flagellar basal-body rod protein [Bacillus cereus MM3]
          Length = 135

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +    +   +S           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNVADLKSNPDLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|331645418|ref|ZP_08346522.1| LfgE [Escherichia coli M605]
 gi|331045580|gb|EGI17706.1| LfgE [Escherichia coli M605]
          Length = 400

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS   GV V 
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 65 KIGVD 69
               
Sbjct: 55 GTAQS 59


>gi|306841276|ref|ZP_07473987.1| flagellar hook protein FlgE [Brucella sp. BO2]
 gi|306288678|gb|EFM60009.1| flagellar hook protein FlgE [Brucella sp. BO2]
          Length = 383

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 337 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 383



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 18/90 (20%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MHGSGGV--RVKK 65
          +  Q+ R+  +++NIANA T G       Y+R    F  +        + SG V   V+ 
Sbjct: 1  MNAQANRLSTVADNIANASTVG-------YKRAETQFSSLVLPSTAGQYNSGSVLTDVRY 53

Query: 66 IGVDQSTFVEEFDPGHPVANASGI--VKYP 93
             DQ              + +G   V+ P
Sbjct: 54 GISDQGGIRSTSSTTDLAIDGNGYFVVQGP 83


>gi|256020228|ref|ZP_05434093.1| flagellar basal body FlaE domain-containing protein [Shigella sp.
           D9]
 gi|332281390|ref|ZP_08393803.1| lateral flagellar hook protein [Shigella sp. D9]
 gi|332103742|gb|EGJ07088.1| lateral flagellar hook protein [Shigella sp. D9]
          Length = 400

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS   GV V 
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 65 KIGVD 69
               
Sbjct: 55 GTAQS 59


>gi|23008562|ref|ZP_00049955.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
          magnetotacticum MS-1]
          Length = 126

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
          + +  IA +G++ Q   +++I+ NIAN  TTG
Sbjct: 1  MRALAIAATGMSAQQLNLEVIANNIANLNTTG 32


>gi|22126390|ref|NP_669813.1| flagellar hook protein FlgE [Yersinia pestis KIM 10]
 gi|45441409|ref|NP_992948.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
           91001]
 gi|51596011|ref|YP_070202.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 32953]
 gi|108807173|ref|YP_651089.1| flagellar hook protein FlgE [Yersinia pestis Antiqua]
 gi|108812483|ref|YP_648250.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|145598610|ref|YP_001162686.1| flagellar hook protein FlgE [Yersinia pestis Pestoides F]
 gi|149366251|ref|ZP_01888286.1| flagellar hook protein FlgE [Yersinia pestis CA88-4125]
 gi|153950658|ref|YP_001401290.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 31758]
 gi|162421636|ref|YP_001606473.1| flagellar hook protein FlgE [Yersinia pestis Angola]
 gi|165925992|ref|ZP_02221824.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938693|ref|ZP_02227248.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010935|ref|ZP_02231833.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210871|ref|ZP_02236906.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401045|ref|ZP_02306548.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420383|ref|ZP_02312136.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425748|ref|ZP_02317501.1| flagellar hook protein FlgE [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170024647|ref|YP_001721152.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis YPIII]
 gi|186895114|ref|YP_001872226.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis PB1/+]
 gi|218928922|ref|YP_002346797.1| flagellar hook protein FlgE [Yersinia pestis CO92]
 gi|229896242|ref|ZP_04511412.1| flagellar hook protein FlgE [Yersinia pestis Pestoides A]
 gi|229897177|ref|ZP_04512333.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229897903|ref|ZP_04513054.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902865|ref|ZP_04517982.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|270486645|ref|ZP_06203719.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
 gi|294504030|ref|YP_003568092.1| flagellar hook protein [Yersinia pestis Z176003]
 gi|21959376|gb|AAM86064.1|AE013853_12 hook protein [Yersinia pestis KIM 10]
 gi|45436269|gb|AAS61825.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
           91001]
 gi|51589293|emb|CAH20914.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 32953]
 gi|108776131|gb|ABG18650.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|108779086|gb|ABG13144.1| flagellar hook protein FlgE [Yersinia pestis Antiqua]
 gi|115347533|emb|CAL20442.1| flagellar hook protein FlgE [Yersinia pestis CO92]
 gi|145210306|gb|ABP39713.1| flagellar hook protein FlgE [Yersinia pestis Pestoides F]
 gi|149292664|gb|EDM42738.1| flagellar hook protein FlgE [Yersinia pestis CA88-4125]
 gi|152962153|gb|ABS49614.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 31758]
 gi|162354451|gb|ABX88399.1| flagellar hook protein FlgE [Yersinia pestis Angola]
 gi|165913307|gb|EDR31929.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922196|gb|EDR39373.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990279|gb|EDR42580.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166208051|gb|EDR52531.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962078|gb|EDR58099.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049434|gb|EDR60842.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055147|gb|EDR64944.1| flagellar hook protein FlgE [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169751181|gb|ACA68699.1| flagellar basal body FlaE domain protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186698140|gb|ACC88769.1| flagellar basal body FlaE domain protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|229680312|gb|EEO76411.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|229688944|gb|EEO81009.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693514|gb|EEO83563.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701165|gb|EEO89194.1| flagellar hook protein FlgE [Yersinia pestis Pestoides A]
 gi|262361784|gb|ACY58505.1| flagellar hook protein [Yersinia pestis D106004]
 gi|262366080|gb|ACY62637.1| flagellar hook protein [Yersinia pestis D182038]
 gi|270335149|gb|EFA45926.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
 gi|294354489|gb|ADE64830.1| flagellar hook protein [Yersinia pestis Z176003]
 gi|320015467|gb|ADV99038.1| flagellar hook protein FlgE [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 428

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 383 SGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVSL 427



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SG+   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS    GV+V  I 
Sbjct: 6  AVSGMNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGIT 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|300936126|ref|ZP_07151065.1| flagellar hook protein FlgE [Escherichia coli MS 21-1]
 gi|300458704|gb|EFK22197.1| flagellar hook protein FlgE [Escherichia coli MS 21-1]
          Length = 400

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS  + V   
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSMA 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTAQS 59


>gi|212634348|ref|YP_002310873.1| flagellar hook protein FlgE [Shewanella piezotolerans WP3]
 gi|212555832|gb|ACJ28286.1| Flagellar basal body rod protein FlaE [Shewanella piezotolerans
           WP3]
          Length = 453

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 5/66 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVR 62
          S +IA SG++     +   + NIAN  TTG        +D Y   +I         GGV 
Sbjct: 2  SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVY-ASSIFANSKTTVGGGVA 60

Query: 63 VKKIGV 68
            ++  
Sbjct: 61 TSQVAQ 66


>gi|254462557|ref|ZP_05075973.1| flagellar hook protein FlgE [Rhodobacterales bacterium HTCC2083]
 gi|206679146|gb|EDZ43633.1| flagellar hook protein FlgE [Rhodobacteraceae bacterium HTCC2083]
          Length = 1399

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 86   ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             SG ++  NV++  E  ++    R + A+ + I+ S  +  T +++
Sbjct: 1352 QSGALERSNVDITEELVNLITAQRNFQASSKAIETSTQLTQTIINI 1397


>gi|157364671|ref|YP_001471438.1| hypothetical protein Tlet_1820 [Thermotoga lettingae TMO]
 gi|157315275|gb|ABV34374.1| protein of unknown function DUF1078 domain protein [Thermotoga
           lettingae TMO]
          Length = 631

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E   M    R + AN + I  +  ++   + L R
Sbjct: 586 GALEMSNVDLAEEFTRMIIAQRGFQANARVITTADTILGELVALRR 631


>gi|331666546|ref|ZP_08367420.1| LfgE [Escherichia coli TA271]
 gi|331065770|gb|EGI37654.1| LfgE [Escherichia coli TA271]
          Length = 400

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS  + V   
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTAQS 59


>gi|301645413|ref|ZP_07245354.1| flagellar hook protein FlgE [Escherichia coli MS 146-1]
 gi|307136858|ref|ZP_07496214.1| flagellar basal body FlaE domain-containing protein [Escherichia
           coli H736]
 gi|331640713|ref|ZP_08341860.1| LfgE [Escherichia coli H736]
 gi|301076297|gb|EFK91103.1| flagellar hook protein FlgE [Escherichia coli MS 146-1]
 gi|315616827|gb|EFU97444.1| flgE [Escherichia coli 3431]
 gi|323181547|gb|EFZ66967.1| flgE [Escherichia coli 1357]
 gi|331040087|gb|EGI12295.1| LfgE [Escherichia coli H736]
          Length = 400

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS   GV V 
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 65 KIGVD 69
               
Sbjct: 55 GTAQS 59


>gi|170681389|ref|YP_001742373.1| lateral flagellar hook protein LfgE [Escherichia coli SMS-3-5]
 gi|170519107|gb|ACB17285.1| lateral flagellar hook protein LfgE [Escherichia coli SMS-3-5]
          Length = 400

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS   GV V 
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 65 KIGVD 69
               
Sbjct: 55 GTAQS 59


>gi|15644291|ref|NP_229343.1| flagellar basal-body rod protein FlgF [Thermotoga maritima MSB8]
 gi|170288995|ref|YP_001739233.1| hypothetical protein TRQ2_1206 [Thermotoga sp. RQ2]
 gi|281412685|ref|YP_003346764.1| flagellar basal-body rod protein FlgF [Thermotoga naphthophila
           RKU-10]
 gi|4982110|gb|AAD36610.1|AE001800_20 flagellar basal-body rod protein FlgF [Thermotoga maritima MSB8]
 gi|170176498|gb|ACB09550.1| protein of unknown function DUF1078 domain protein [Thermotoga sp.
           RQ2]
 gi|281373788|gb|ADA67350.1| flagellar basal-body rod protein FlgF [Thermotoga naphthophila
           RKU-10]
          Length = 249

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G V+  NV+ L    DM    R Y  + + +  + ++    ++
Sbjct: 200 QGYVEKSNVDALKAMVDMISAMRHYELSQRAVTVNDELNGKLIN 243



 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR--KTISFEEVMHGSGGVRVKKIGV 68
          A  G+ V  A++  I+ ++AN  T G     + +R   +   F +  +     R KK+ +
Sbjct: 8  AAMGMLVDMAKLDRIANDLANVDTAGYKQDREAFRAYLRREVFRQEPNPVES-RTKKVPI 66

Query: 69 DQSTFVEEFD 78
              +    D
Sbjct: 67 GPLEYATVLD 76


>gi|71282391|ref|YP_268224.1| flagellar basal body rod protein FlgG [Colwellia psychrerythraea
           34H]
 gi|71148131|gb|AAZ28604.1| flagellar basal-body rod protein FlgG [Colwellia psychrerythraea
           34H]
          Length = 262

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVN   E  ++ E+ R+Y  N + I    +M++
Sbjct: 217 QGALETSNVNTTEELVNLIESQRVYEMNSKVISAVDEMLS 256



 Score = 40.3 bits (94), Expect = 0.079,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + A+  I+ +GL  Q+  + +IS N+ANA T G       +++    FE++++ +
Sbjct: 1  MNAALWISKTGLDAQTKDIAVISNNLANASTIG-------FKKSRAVFEDLLYQN 48


>gi|146277708|ref|YP_001167867.1| flagellar basal body FlaE domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145555949|gb|ABP70562.1| flagellar basal body FlaE domain protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 423

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 26/45 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G +++ NV++  E   +    R Y A+ + ++ S+ +M T +++
Sbjct: 377 AGALEHANVDLTEELVHLITAQRNYQASAKAMETSNSLMQTIMNI 421


>gi|323191538|gb|EFZ76799.1| flgE [Escherichia coli RN587/1]
          Length = 400

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS  + V   
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTAQS 59


>gi|300817270|ref|ZP_07097488.1| flagellar hook protein FlgE [Escherichia coli MS 107-1]
 gi|307313519|ref|ZP_07593140.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|300530246|gb|EFK51308.1| flagellar hook protein FlgE [Escherichia coli MS 107-1]
 gi|306906687|gb|EFN37198.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|315059542|gb|ADT73869.1| flagellar hook protein [Escherichia coli W]
 gi|323171064|gb|EFZ56713.1| flgE [Escherichia coli LT-68]
 gi|323379899|gb|ADX52167.1| fagellar hook-basal body protein [Escherichia coli KO11]
          Length = 400

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS  + V   
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTAQS 59


>gi|188494513|ref|ZP_03001783.1| Flagellar basal body protein FlgE [Escherichia coli 53638]
 gi|188489712|gb|EDU64815.1| Flagellar basal body protein FlgE [Escherichia coli 53638]
          Length = 400

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS  + V   
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTAQS 59


>gi|229542504|ref|ZP_04431564.1| flagellar basal-body rod protein FlgF [Bacillus coagulans 36D1]
 gi|229326924|gb|EEN92599.1| flagellar basal-body rod protein FlgF [Bacillus coagulans 36D1]
          Length = 262

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 18/45 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV+      DM    R + AN + ++     +   ++
Sbjct: 213 KQGFLESSNVDETKTMTDMMSAYRSFEANQKVLQAYDASLGKAVN 257



 Score = 37.2 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++   + A SG+  Q  +  +++ N++NA T G
Sbjct: 1  MLRGLYTAASGMIAQQRKTDLLANNLSNADTPG 33


>gi|222100100|ref|YP_002534668.1| Flagellar basal-body rod protein FlgF [Thermotoga neapolitana DSM
           4359]
 gi|221572490|gb|ACM23302.1| Flagellar basal-body rod protein FlgF [Thermotoga neapolitana DSM
           4359]
          Length = 252

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G V+  NVN L    DM    R Y  + + +  + ++    ++
Sbjct: 203 QGYVEKSNVNALKAMVDMISAMRHYELSQRAVLVNDELNGKLIN 246


>gi|254503336|ref|ZP_05115487.1| Flagellar basal body protein FlaE [Labrenzia alexandrii DFL-11]
 gi|222439407|gb|EEE46086.1| Flagellar basal body protein FlaE [Labrenzia alexandrii DFL-11]
          Length = 421

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E   M E+ R Y AN Q  K   D+M   ++L+R
Sbjct: 376 GALEGSNVDLANELTSMIESQRTYTANSQVFKAGSDLMQELVNLVR 421



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 7/53 (13%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
               SG+  QS+++  +++NIAN+ TTG       Y+R    F   +   GG
Sbjct: 1  MRTGVSGMNAQSSKLGAVADNIANSSTTG-------YKRAETEFASQVLAQGG 46


>gi|21242730|ref|NP_642312.1| flagellar basal body rod protein FlgB [Xanthomonas axonopodis pv.
          citri str. 306]
 gi|78047589|ref|YP_363764.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
 gi|294625271|ref|ZP_06703910.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 11122]
 gi|294664588|ref|ZP_06729929.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 10535]
 gi|21108206|gb|AAM36848.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|78036019|emb|CAJ23710.1| flagellar basal body protein [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
 gi|292600445|gb|EFF44543.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 11122]
 gi|292605645|gb|EFF48955.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 10535]
          Length = 133

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 7/59 (11%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
              +   +    L ++  RM++I+ N++N  T G       Y+ K ++FE  +  + G
Sbjct: 3  SPFSSFLGVHGDALTLREQRMKLIASNLSNVDTPG-------YKAKDLNFEAALKSAQG 54


>gi|59889780|emb|CAH19136.1| Lateral flagellar hook protein (FlgE-like) [Escherichia coli]
 gi|284920044|emb|CBG33101.1| lateral flagellar hook protein (FlgE-like) [Escherichia coli 042]
          Length = 400

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS  + V   
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTAQS 59


>gi|1086558|gb|AAB68965.1| FlgB [Agrobacterium tumefaciens]
          Length = 134

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 16/118 (13%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVRVKKIGVDQSTFVE-- 75
           S R ++++ NIANA T         +  K +S FE VM  +   +V     + +   E  
Sbjct: 22  SVRQEVVATNIANANTPK-------FHAKDVSPFEAVMQATS-QQVGMARTNPAPPREST 73

Query: 76  ----EFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                    +PV N  G+ +  N V +  E     E  R Y  N   +K  H MM  T
Sbjct: 74  LSENIAVRDNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLVKSFHRMMLMT 131


>gi|256004780|ref|ZP_05429755.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum DSM
           2360]
 gi|255991230|gb|EEU01337.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum DSM
           2360]
 gi|316940781|gb|ADU74815.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum DSM
           1313]
          Length = 134

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 40/110 (36%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GGVRVK------ 64
           L     R + IS+NIAN  T G       Y+RKT++FEE ++ +     G+R +      
Sbjct: 16  LDAALLRNEAISQNIANVDTPG-------YKRKTVAFEEYLNDARAKIKGIRTRPEHIPV 68

Query: 65  ----------KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                     K+  D+S+     D               NV++  E A M
Sbjct: 69  GARDVMDIDIKVSEDRSSLSMRLDEN-------------NVDIEEEMAQM 105


>gi|170021360|ref|YP_001726314.1| flagellar basal body FlaE domain-containing protein [Escherichia
           coli ATCC 8739]
 gi|169756288|gb|ACA78987.1| flagellar basal body FlaE domain protein [Escherichia coli ATCC
           8739]
          Length = 400

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS  + V   
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTAQS 59


>gi|294140184|ref|YP_003556162.1| flagellar hook protein FlgE [Shewanella violacea DSS12]
 gi|293326653|dbj|BAJ01384.1| flagellar hook protein FlgE [Shewanella violacea DSS12]
          Length = 454

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 413 EQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTILQI 453



 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHG-SGGV 61
          S +IA SG+A     +   + NIAN  + G        +D Y      F        GGV
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFADVYA--NSIFANSKTAVGGGV 59

Query: 62 RVKKIGV 68
             ++  
Sbjct: 60 TTSQVAQ 66


>gi|167623361|ref|YP_001673655.1| flagellar hook protein FlgE [Shewanella halifaxensis HAW-EB4]
 gi|167353383|gb|ABZ75996.1| flagellar basal body FlaE domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 453

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTILQI 452



 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 5/66 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVR 62
          S +IA SG++     +   + NIAN  TTG        +D Y   +I         GGV 
Sbjct: 2  SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVY-ASSIFANSKTTVGGGVA 60

Query: 63 VKKIGV 68
            ++  
Sbjct: 61 TSQVAQ 66


>gi|51597637|ref|YP_071828.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 32953]
 gi|186896771|ref|YP_001873883.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis PB1/+]
 gi|51590919|emb|CAH22575.1| Putative FlgE-like flagellar hook protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|186699797|gb|ACC90426.1| flagellar basal body FlaE domain protein [Yersinia
           pseudotuberculosis PB1/+]
          Length = 414

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            SG ++  NV++  E   +    R Y A+ + I  +  MM     +L
Sbjct: 368 ESGALENSNVDITAELVGLMTAQRNYQASTKIISTNDSMMNALFQVL 414



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IAN+ L   + ++  IS NIAN+ T G       ++     F  +   S   GV V 
Sbjct: 2  SFSIANTALNAHTEQLNTISNNIANSATKG-------FKASRTEFSSMYAQSQPLGVAVS 54

Query: 65 KI 66
           +
Sbjct: 55 GV 56


>gi|78358199|ref|YP_389648.1| flagellar basal-body rod protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220604|gb|ABB39953.1| flagellar basal-body rod protein, putative [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 260

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM-MTTTLDLLR 133
            G ++  NV V+ E  +M E NR + A  + ++ +  +    T  + R
Sbjct: 210 QGFLETANVEVVTEMVNMIEANRQFEAYQKIMQTTDAVDKMATTQVGR 257


>gi|329898289|ref|ZP_08272372.1| Flagellar hook protein flgE [gamma proteobacterium IMCC3088]
 gi|328920854|gb|EGG28297.1| Flagellar hook protein flgE [gamma proteobacterium IMCC3088]
          Length = 975

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G  +  NV++  E  ++    R + AN + I+ S  + +T +++
Sbjct: 929 AGATERSNVDLTAELVNLITAQRNFQANAKAIETSSTLTSTIINM 973



 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 7/61 (11%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S + + +GL   +  + + S NIAN+ T G       ++R + SF ++   S   R   +
Sbjct: 2  SFYTSLTGLNAATTELSVTSNNIANSATAG-------FKRSSASFGDIFATSPLQRASAV 54

Query: 67 G 67
           
Sbjct: 55 V 55


>gi|300854216|ref|YP_003779200.1| putative flagellar hook protein FlgE [Clostridium ljungdahlii DSM
           13528]
 gi|300434331|gb|ADK14098.1| predicted flagellar hook protein FlgE [Clostridium ljungdahlii DSM
           13528]
          Length = 323

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + AN + I     ++   ++L R
Sbjct: 277 QGALEMSNVDLAQQFTDMIVATRAFQANGKIITTDDTILEDLVNLKR 323



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 28/87 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          ++ S + A SGL V   ++ + S+NIAN+ TTG       ++ K + FE+++        
Sbjct: 1  MLPSLYTAISGLRVNQQKLNVTSDNIANSSTTG-------FKSKNMIFEDMLSQNLSDPS 53

Query: 56 -------------HGSGGVRVKKIGVD 69
                           GV+V  I  D
Sbjct: 54 APVDGGLGGINARQSGLGVKVAGINTD 80


>gi|197104256|ref|YP_002129633.1| flagellar hook-associated protein [Phenylobacterium zucineum
          HLK1]
 gi|196477676|gb|ACG77204.1| flagellar hook-associated protein [Phenylobacterium zucineum
          HLK1]
          Length = 700

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 9/61 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-VMHGSG-GVRVK 64
          +   A SGL    A ++ +S+NIAN  T G       Y RK +  +  V+ G G GVRV+
Sbjct: 6  TLQTAASGLNAAQASLRAVSDNIANVNTPG-------YVRKAVVQQPLVVDGVGMGVRVQ 58

Query: 65 K 65
           
Sbjct: 59 G 59


>gi|332187911|ref|ZP_08389644.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
 gi|332012072|gb|EGI54144.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
          Length = 430

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  ++    R + AN + +  S  +  T  ++
Sbjct: 387 IEGSNVDITEELVNLIAAQRNFQANAKALDTSSQISQTIFNI 428


>gi|306813303|ref|ZP_07447496.1| flagellar basal body FlaE domain-containing protein [Escherichia
           coli NC101]
 gi|305854066|gb|EFM54505.1| flagellar basal body FlaE domain-containing protein [Escherichia
           coli NC101]
          Length = 400

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS  + V   
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTAQS 59


>gi|163845457|ref|YP_001623112.1| flagellar hook protein FlgE [Brucella suis ATCC 23445]
 gi|163676180|gb|ABY40290.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 396

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 350 SGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 396



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 18/101 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          L        SG+  Q+ R+  +++NIANA   G       Y+R    F  +        +
Sbjct: 3  LYGMMRTGVSGMNAQANRLSTVADNIANASMVG-------YKRAETQFSSLVLPSTAGQY 55

Query: 57 GSGGV--RVKKIGVDQSTFVEEFDPGHPVANASGI--VKYP 93
           SG V   V+    DQ              + +G   V+ P
Sbjct: 56 NSGSVLTDVRYGISDQGGIRSTSSTTDLAIDDNGYFVVQGP 96


>gi|114330361|ref|YP_746583.1| flagellar hook protein FlgE [Nitrosomonas eutropha C91]
 gi|114307375|gb|ABI58618.1| flagellar basal body FlaE domain protein [Nitrosomonas eutropha
           C91]
          Length = 419

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 24/42 (57%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E   +  T R+Y AN +TI+    +M + +++
Sbjct: 378 VEESNVDLTSELVSLIMTQRVYQANAKTIQTQDAVMQSIMNI 419



 Score = 40.7 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          SGL   SA++ +   NIANA T G       +++    F +V   S G    +IG+
Sbjct: 8  SGLKAASAKLDVTGNNIANANTVG-------FKQSQAQFSDVFANSLGGGKNQIGI 56


>gi|213613181|ref|ZP_03371007.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 110

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 65  NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 109


>gi|254439743|ref|ZP_05053237.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198255189|gb|EDY79503.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 1412

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 86   ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             SG ++  NV++  E  ++    R + A+ + I+ S  +  T +++
Sbjct: 1365 QSGALERSNVDITEELVNLITAQRNFQASSKAIETSTQLTQTIINI 1410


>gi|22127327|ref|NP_670750.1| flagellar hook protein FlgE [Yersinia pestis KIM 10]
 gi|45442796|ref|NP_994335.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
           91001]
 gi|108809055|ref|YP_652971.1| flagellar hook protein FlgE [Yersinia pestis Antiqua]
 gi|108810748|ref|YP_646515.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|145597817|ref|YP_001161893.1| flagellar hook protein FlgE [Yersinia pestis Pestoides F]
 gi|150260249|ref|ZP_01916977.1| lateral flagellar hook protein [Yersinia pestis CA88-4125]
 gi|162421081|ref|YP_001604847.1| flagellar hook protein FlgE [Yersinia pestis Angola]
 gi|165924960|ref|ZP_02220792.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939066|ref|ZP_02227618.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166008888|ref|ZP_02229786.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211930|ref|ZP_02237965.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399572|ref|ZP_02305096.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419268|ref|ZP_02311021.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425161|ref|ZP_02316914.1| flagellar hook protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167466340|ref|ZP_02331044.1| flagellar hook protein [Yersinia pestis FV-1]
 gi|218927912|ref|YP_002345787.1| flagellar hook protein FlgE [Yersinia pestis CO92]
 gi|229837408|ref|ZP_04457571.1| Flagellar hook protein flgE [Yersinia pestis Pestoides A]
 gi|229840621|ref|ZP_04460780.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842828|ref|ZP_04462980.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229900945|ref|ZP_04516069.1| Flagellar hook protein flgE [Yersinia pestis Nepal516]
 gi|270487673|ref|ZP_06204747.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
 gi|294502788|ref|YP_003566850.1| flagellar hook protein [Yersinia pestis Z176003]
 gi|21960408|gb|AAM87001.1|AE013948_9 putative flagellar hook protein [Yersinia pestis KIM 10]
 gi|45437662|gb|AAS63212.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
           91001]
 gi|108774396|gb|ABG16915.1| flagellar hook protein [Yersinia pestis Nepal516]
 gi|108780968|gb|ABG15026.1| putative flagellar hook protein [Yersinia pestis Antiqua]
 gi|115346523|emb|CAL19399.1| putative flagellar hook protein [Yersinia pestis CO92]
 gi|145209513|gb|ABP38920.1| flagellar hook protein [Yersinia pestis Pestoides F]
 gi|149289657|gb|EDM39734.1| lateral flagellar hook protein [Yersinia pestis CA88-4125]
 gi|162353896|gb|ABX87844.1| flagellar hook protein [Yersinia pestis Angola]
 gi|165913022|gb|EDR31647.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923160|gb|EDR40311.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165992227|gb|EDR44528.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166206676|gb|EDR51156.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166963262|gb|EDR59283.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167052076|gb|EDR63484.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055924|gb|EDR65705.1| flagellar hook protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229682284|gb|EEO78376.1| Flagellar hook protein flgE [Yersinia pestis Nepal516]
 gi|229690095|gb|EEO82152.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229696987|gb|EEO87034.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229705531|gb|EEO91541.1| Flagellar hook protein flgE [Yersinia pestis Pestoides A]
 gi|262360820|gb|ACY57541.1| flagellar hook protein [Yersinia pestis D106004]
 gi|270336177|gb|EFA46954.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
 gi|294353247|gb|ADE63588.1| flagellar hook protein [Yersinia pestis Z176003]
 gi|320016711|gb|ADW00283.1| Flagellar hook protein flgE [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 413

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            SG ++  NV++  E   +    R Y A+ + I  +  MM     +L
Sbjct: 367 ESGALENSNVDITAELVGLMTAQRNYQASTKIISTNDSMMNALFQVL 413



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IAN+ L   + ++  IS NIAN+ T G       ++     F  +   S   GV V 
Sbjct: 2  SFSIANTALNAHTEQLNTISNNIANSATKG-------FKASRTEFSSMYAQSQPLGVAVS 54

Query: 65 KI 66
           +
Sbjct: 55 GV 56


>gi|260853466|ref|YP_003227357.1| putative lateral flagellar hook protein [Escherichia coli O26:H11
           str. 11368]
 gi|260866413|ref|YP_003232815.1| putative lateral flagellar hook protein [Escherichia coli O111:H-
           str. 11128]
 gi|257752115|dbj|BAI23617.1| predicted lateral flagellar hook protein [Escherichia coli O26:H11
           str. 11368]
 gi|257762769|dbj|BAI34264.1| predicted lateral flagellar hook protein [Escherichia coli O111:H-
           str. 11128]
 gi|323158103|gb|EFZ44202.1| hypothetical protein ECEPECA14_0101 [Escherichia coli EPECa14]
 gi|323178494|gb|EFZ64072.1| hypothetical protein ECOK1180_3007 [Escherichia coli 1180]
          Length = 400

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 354 SSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS  + V   
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTAQS 59


>gi|94987008|ref|YP_594941.1| flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
 gi|94731257|emb|CAJ54620.1| Flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
          Length = 690

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 78  DPGHPVANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           DP    AN SG        ++  NV++  E   M  T R + +N + +     M+ T ++
Sbjct: 628 DPSSGAANTSGFGSINANTLEGSNVDISTEFVSMIATQRGFQSNSKIVTTIDQMLETVVN 687

Query: 131 LLR 133
           + R
Sbjct: 688 MKR 690



 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          L A      SGL     +M +I  NIAN  T G
Sbjct: 3  LTAGMWTGVSGLLSHGEKMNVIGNNIANVNTVG 35


>gi|154250212|ref|YP_001411037.1| hypothetical protein Fnod_1537 [Fervidobacterium nodosum Rt17-B1]
 gi|154154148|gb|ABS61380.1| protein of unknown function DUF1078 domain protein
           [Fervidobacterium nodosum Rt17-B1]
          Length = 770

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  E   +    R + AN +TI  +  ++   ++L R
Sbjct: 724 AGALEMSNVDLSEEFTKLIIAQRGFQANARTITTADQILQEVVNLRR 770


>gi|303328382|ref|ZP_07358820.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3]
 gi|302861712|gb|EFL84648.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3]
          Length = 264

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             G  +  NV V+ E  +M E  R + A  + ++ S  +     + + R
Sbjct: 213 EQGFAEAANVQVVTEMVNMIEVQRQFEAYQKVMQSSDSLDRAANEKIGR 261



 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 11/54 (20%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          D L +        L  +  RM  I+ N+AN  T G       Y+R T++F++ M
Sbjct: 3  DALFSGLF---GALTTE-HRMNFIANNLANVNTHG-------YKRDTLAFKDTM 45


>gi|299538001|ref|ZP_07051287.1| flagellar hook-basal body complex protein [Lysinibacillus
           fusiformis ZC1]
 gi|298726583|gb|EFI67172.1| flagellar hook-basal body complex protein [Lysinibacillus
           fusiformis ZC1]
          Length = 279

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            SG ++  NVN+  E  ++ +T R Y  N + +  +  M+
Sbjct: 233 QSGTLEMSNVNLSKEMTELIQTQRSYQFNARAVTLADQML 272



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  IS NIAN+ TTG       Y+ K  SF E+++  
Sbjct: 19 LDTISNNIANSNTTG-------YKTKEASFNELLYQQ 48


>gi|325921021|ref|ZP_08182903.1| flagellar basal-body rod protein FlgB [Xanthomonas gardneri ATCC
           19865]
 gi|325548503|gb|EGD19475.1| flagellar basal-body rod protein FlgB [Xanthomonas gardneri ATCC
           19865]
          Length = 182

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 7/61 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + + +   I    L ++  RM++I+ N++N  T G       Y+ K + FE  +  + GV
Sbjct: 52  NSISSFLGIHGDALPLREQRMKLIASNLSNVDTPG-------YKAKDMDFEAALKSAEGV 104

Query: 62  R 62
           R
Sbjct: 105 R 105


>gi|315648129|ref|ZP_07901230.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
 gi|315276775|gb|EFU40118.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
          Length = 274

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 27/50 (54%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  +G ++  NV++  E ++M    R + AN + I  S +++   ++L R
Sbjct: 225 AIIAGQLEMSNVDLTSEFSEMIVAQRGFQANSRIITTSDEVLQEVVNLKR 274



 Score = 40.3 bits (94), Expect = 0.086,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 19/76 (25%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          ++ S +   SG+     ++ +I  NIAN  T G       ++   + F++++        
Sbjct: 1  MLRSMYSGISGMRGFQTKLDVIGNNIANVNTVG-------FKAGRVMFKDILSQTMSGVT 53

Query: 56 ----HGSGGVRVKKIG 67
                SGGV  K+IG
Sbjct: 54 PGTDDPSGGVNAKQIG 69


>gi|281417194|ref|ZP_06248214.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
           JW20]
 gi|281408596|gb|EFB38854.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
           JW20]
          Length = 134

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 40/110 (36%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GGVRVK------ 64
           L     R + IS+NIAN  T G       Y+RKT++FEE ++ +     G+R +      
Sbjct: 16  LDAALLRNEAISQNIANVDTPG-------YKRKTVAFEEYLNDARAKIKGIRTRPEHIPV 68

Query: 65  ----------KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                     K+  D+S+     D               NV++  E A M
Sbjct: 69  GARDVMDIDIKVSEDRSSLSMRLDEN-------------NVDIEEEMAQM 105


>gi|238788315|ref|ZP_04632109.1| Flagellar hook protein FlgE [Yersinia frederiksenii ATCC 33641]
 gi|238723561|gb|EEQ15207.1| Flagellar hook protein FlgE [Yersinia frederiksenii ATCC 33641]
          Length = 428

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 389 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVNL 427



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS    GV+V  I 
Sbjct: 6  AVSGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGIT 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|294140185|ref|YP_003556163.1| flagellar hook protein FlgE [Shewanella violacea DSS12]
 gi|293326654|dbj|BAJ01385.1| flagellar hook protein FlgE [Shewanella violacea DSS12]
          Length = 453

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTILQI 452



 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHG-SGGV 61
          S +IA SG+A     +   + NIAN  + G        SD Y      F        GGV
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFSDVYA--NSIFSNSKTAVGGGV 59

Query: 62 RVKKIGV 68
             ++  
Sbjct: 60 TTSQVAQ 66


>gi|313895889|ref|ZP_07829443.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
          str. F0430]
 gi|312975314|gb|EFR40775.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
          str. F0430]
          Length = 274

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  + +      SGL     RM +I  NIAN  TTG       ++   ++FE+++  +
Sbjct: 2  MRSMFSGV----SGLKSHQTRMDVIGNNIANVNTTG-------FKAGRVTFEDMLSQT 48


>gi|301168505|emb|CBW28095.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
          Length = 261

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A G ++  NV+++ E   + +  R Y  N + +  +  M+ T  ++
Sbjct: 215 AQGALESSNVSIMNEMTSLIKAQRAYEMNSKVMGVADQMLQTVNNI 260



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + + A +G+A Q   +  IS NIAN  TTG
Sbjct: 1  MLRALNTAATGMAAQEMNVSTISNNIANVNTTG 33


>gi|219670131|ref|YP_002460566.1| hypothetical protein Dhaf_4121 [Desulfitobacterium hafniense DCB-2]
 gi|219540391|gb|ACL22130.1| protein of unknown function DUF1078 domain protein
           [Desulfitobacterium hafniense DCB-2]
          Length = 251

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NVN+  +   M    R Y AN + I+     +   + ++ R
Sbjct: 202 QGTLEGSNVNLPGQMVKMITVMRAYEANQKVIQTHDATLEKAVNEIGR 249


>gi|315125984|ref|YP_004067987.1| flagellar hook protein FlgE [Pseudoalteromonas sp. SM9913]
 gi|315014498|gb|ADT67836.1| flagellar hook protein FlgE [Pseudoalteromonas sp. SM9913]
          Length = 442

 Score = 46.8 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 9/67 (13%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGVR 62
          ++  +I  SGL    A +++ S NIAN+ T G       Y+  T  F  V +GS  GGV+
Sbjct: 1  MSMFNIGLSGLKSTQAGLEVTSNNIANSGTAG-------YKNNTAEFAAVYNGSQRGGVK 53

Query: 63 VKKIGVD 69
          V  +  D
Sbjct: 54 VANVKED 60



 Score = 41.1 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           SG     NV++  +   +    + Y AN +TI  + +MM 
Sbjct: 397 SGSFMGSNVDISEQLVGLMSFQQNYQANAKTISSADEMMQ 436


>gi|222834411|gb|EEE72888.1| predicted protein [Populus trichocarpa]
          Length = 280

 Score = 46.8 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            SG V+  NV++  +  ++    R Y AN QTIK    +M T +
Sbjct: 5   QSGSVEESNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLI 48



 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           SG ++  NVN +    +M    R +   ++ I  +         LL +
Sbjct: 232 SGALEGSNVNPVESMVEMIANARRFEMQMKMITGADSNDQRANALLSN 279


>gi|90411005|ref|ZP_01219019.1| flagellar hook protein [Photobacterium profundum 3TCK]
 gi|90328218|gb|EAS44529.1| flagellar hook protein [Photobacterium profundum 3TCK]
          Length = 435

 Score = 46.8 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  D+    R + AN + ++  + +  T L +
Sbjct: 389 KSGTLEQSNIDMTQELVDLITAQRNFQANSRALEVDNQLQQTILQI 434



 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 6/80 (7%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I+ SG+      +   S NIANA T G         D Y     S  +   G GGV+ 
Sbjct: 3  FNISLSGIGASQKDLNTTSNNIANANTYGFKESRAEFGDVYSSSIFSNAKTTTG-GGVQT 61

Query: 64 KKIGVDQSTFVEEFDPGHPV 83
            +          +   +P+
Sbjct: 62 SVVAQQFHEGSSIY-TNNPM 80


>gi|89895707|ref|YP_519194.1| hypothetical protein DSY2961 [Desulfitobacterium hafniense Y51]
 gi|89335155|dbj|BAE84750.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 251

 Score = 46.8 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NVN+  +   M    R Y AN + I+     +   + ++ R
Sbjct: 202 QGTLEGSNVNLPGQMVKMITVMRAYEANQKVIQTHDATLEKAVNEIGR 249


>gi|54308097|ref|YP_129117.1| flagellar hook protein FlgE [Photobacterium profundum SS9]
 gi|46912523|emb|CAG19315.1| putative flagellar hook protein FlgE [Photobacterium profundum SS9]
          Length = 435

 Score = 46.8 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  D+    R + AN + ++  + +  T L +
Sbjct: 389 KSGTLEQSNIDMTQELVDLITAQRNFQANSRALEVDNQLQQTILQI 434



 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 6/80 (7%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I+ SG+      +   S NIANA T G         D Y     S  +   G GGV+ 
Sbjct: 3  FNISLSGIGASQKDLNTTSNNIANANTYGFKESRAEFGDVYSSSIFSNAKTTTG-GGVQT 61

Query: 64 KKIGVDQSTFVEEFDPGHPV 83
            +          +   +P+
Sbjct: 62 SVVAQQFHEGSSIY-TNNPM 80


>gi|238799107|ref|ZP_04642563.1| Flagellar hook protein FlgE [Yersinia mollaretii ATCC 43969]
 gi|238717054|gb|EEQ08914.1| Flagellar hook protein FlgE [Yersinia mollaretii ATCC 43969]
          Length = 420

 Score = 46.8 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 381 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVNL 419



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS    GV+V  I 
Sbjct: 6  AVSGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGIT 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|226313061|ref|YP_002772955.1| flagellar hook protein FlgE [Brevibacillus brevis NBRC 100599]
 gi|226096009|dbj|BAH44451.1| flagellar hook protein FlgE [Brevibacillus brevis NBRC 100599]
          Length = 272

 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 78  DPGHPVANAS-------GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           DP  PV  A        G ++  NV++  E  +M    R + AN + I  S  ++   ++
Sbjct: 210 DPMTPVTPADAKVSIIAGQLEMSNVDLSEEFTEMIVAQRGFQANSRIITTSDTVLEELVN 269

Query: 131 LLR 133
           L R
Sbjct: 270 LKR 272



 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     ++ +I  NIAN  T G       +++  + F++++  +
Sbjct: 1  MLRSMYSGISGLRGFQTKLDVIGNNIANVNTVG-------FKKGRVMFQDILSQN 48


>gi|167644972|ref|YP_001682635.1| flagellar hook-associated protein FlgK [Caulobacter sp. K31]
 gi|167347402|gb|ABZ70137.1| flagellar hook-associated protein FlgK [Caulobacter sp. K31]
          Length = 704

 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 7/60 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L    ++A SG+      ++++S+NIAN  T G       Y RKTI+   ++    GV V
Sbjct: 3  LNTILNVATSGMMAAQTGLRVVSDNIANINTAG-------YVRKTIAQSNLVSNGMGVGV 55


>gi|317130722|ref|YP_004097004.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315475670|gb|ADU32273.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 279

 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           + G+++  NV++  E  +M  T R Y  N + I  + +MM
Sbjct: 233 SQGMLEQSNVDMGREMTEMMLTQRNYQFNSRAISIADEMM 272



 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 8/39 (20%)

Query: 18 QSAR-MQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          Q  R +  +  N+AN  TTG       Y+R+ +SF +++
Sbjct: 17 QMQRKLDTVGNNLANLNTTG-------YKRRDVSFSDLL 48


>gi|68164546|gb|AAY87275.1| predicted flagellar hook protein [uncultured bacterium BAC17H8]
          Length = 1387

 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 24/45 (53%)

Query: 87   SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E  ++    R + A+ + I+ +  +  T +++
Sbjct: 1341 SGSLERSNVDITEELVNLITAQRNFQASAKAIETTTGLTQTIINI 1385


>gi|224373714|ref|YP_002608086.1| flagellar basal body rod protein FlgB [Nautilia profundicola AmH]
 gi|223588710|gb|ACM92446.1| flagellar basal-body rod protein FlgB [Nautilia profundicola AmH]
          Length = 143

 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 29/150 (19%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  S  I    L  +  R  +I+ NIANA T         YR K I FEE +       
Sbjct: 4   EISKSFDILEKSLHYRKIRQDMIASNIANADT-------PYYRPKDIRFEEALQA----E 52

Query: 63  VKKIGVDQSTFVEEF---DPGHPVA-----NASGIVKYPN----------VNVLVETADM 104
           V K    ++    E    +PGH  A     +A  IV Y +          V++ VET +M
Sbjct: 53  VDKKFNIRTAPKLELAKTEPGHMAAPDESSDAKPIVFYRDGHLARNDGNSVDIDVETTEM 112

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            + N  Y A +Q +++  D+    +D  ++
Sbjct: 113 AKNNIAYNAAIQALRKDIDIFKAVIDSSKN 142


>gi|167770210|ref|ZP_02442263.1| hypothetical protein ANACOL_01553 [Anaerotruncus colihominis DSM
           17241]
 gi|167667532|gb|EDS11662.1| hypothetical protein ANACOL_01553 [Anaerotruncus colihominis DSM
           17241]
          Length = 556

 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E +DM  T R + AN + I  S  M+   ++L R
Sbjct: 514 EMSNVDLSQEFSDMIVTQRGFQANSRLITVSDTMLEELINLKR 556



 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 18/65 (27%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-----------GGVR 62
          G+     RM +I  NIAN  T G       ++   ++F ++ + +           GGV 
Sbjct: 7  GMKSHQQRMDVIGNNIANVNTYG-------FKSSRVTFRDMFYQNIRNASAGTSTRGGVS 59

Query: 63 VKKIG 67
             +G
Sbjct: 60 PSGVG 64


>gi|77463652|ref|YP_353156.1| flagellar hook protein FlgE [Rhodobacter sphaeroides 2.4.1]
 gi|77388070|gb|ABA79255.1| flagellar hook protein FlgE [Rhodobacter sphaeroides 2.4.1]
          Length = 423

 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 26/45 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G +++ NV++  E   +    R Y A+ + ++ S+ +M T +++
Sbjct: 377 AGALEHANVDLTEELVHLITAQRNYQASAKAMETSNSLMQTIMNI 421


>gi|221639495|ref|YP_002525757.1| Flagellar hook protein FlgE [Rhodobacter sphaeroides KD131]
 gi|221160276|gb|ACM01256.1| Flagellar hook protein FlgE [Rhodobacter sphaeroides KD131]
          Length = 423

 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 26/45 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G +++ NV++  E   +    R Y A+ + ++ S+ +M T +++
Sbjct: 377 AGALEHANVDLTEELVHLITAQRNYQASAKAMETSNSLMQTIMNI 421


>gi|254475034|ref|ZP_05088420.1| flagellar hook-associated protein FlgK [Ruegeria sp. R11]
 gi|214029277|gb|EEB70112.1| flagellar hook-associated protein FlgK [Ruegeria sp. R11]
          Length = 482

 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 7/65 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++ + A SGL     +  ++SEN+AN  T G       Y R++++      G  GVRV
Sbjct: 3  ITSALNSAMSGLTAAGRQTSVVSENLANVLTPG-------YSRRSVALTSAGDGFAGVRV 55

Query: 64 KKIGV 68
            +  
Sbjct: 56 NGVQR 60


>gi|238785497|ref|ZP_04629480.1| Flagellar hook protein FlgE [Yersinia bercovieri ATCC 43970]
 gi|238713599|gb|EEQ05628.1| Flagellar hook protein FlgE [Yersinia bercovieri ATCC 43970]
          Length = 419

 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 380 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVNL 418



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS    GV+V  I 
Sbjct: 6  AVSGLNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGIT 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|269960122|ref|ZP_06174498.1| putative flagellar hook-associated protein 1 [Vibrio harveyi
          1DA3]
 gi|269835093|gb|EEZ89176.1| putative flagellar hook-associated protein 1 [Vibrio harveyi
          1DA3]
          Length = 457

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 16/90 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SGGV 61
          +IA SGL      + + ++N+AN  T G       Y R+      V  G         GV
Sbjct: 5  NIALSGLNANRVALDVTAQNVANINTPG-------YSRQQALTASVGDGKYNKLSPGMGV 57

Query: 62 RVKKIGVDQSTF--VEEFDPGHPVANASGI 89
           V  I      F   + +      A ++G 
Sbjct: 58 EVTSIRRVTDQFLVKQTWSTNSLAAYSAGY 87


>gi|332558508|ref|ZP_08412830.1| FlgE [Rhodobacter sphaeroides WS8N]
 gi|12057218|gb|AAF14370.2|AF133240_4 flagellar hook protein FlgE [Rhodobacter sphaeroides]
 gi|332276220|gb|EGJ21535.1| FlgE [Rhodobacter sphaeroides WS8N]
          Length = 423

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 26/45 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G +++ NV++  E   +    R Y A+ + ++ S+ +M T +++
Sbjct: 377 AGALEHANVDLTEELVHLITAQRNYQASAKAMETSNSLMQTIMNI 421


>gi|46579854|ref|YP_010662.1| flagellar hook protein FlgE [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602680|ref|YP_967080.1| hypothetical protein Dvul_1636 [Desulfovibrio vulgaris DP4]
 gi|46449270|gb|AAS95921.1| flagellar hook protein FlgE [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120562909|gb|ABM28653.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris DP4]
 gi|311234145|gb|ADP86999.1| flagellar hook-basal body protein [Desulfovibrio vulgaris RCH1]
          Length = 564

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 7/57 (12%)

Query: 84  ANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           AN++G+       ++  NV++  E  +M  T R + +N + I  +  M+   +++ R
Sbjct: 508 ANSNGLGAISSNSLEQSNVDLAREFVEMITTQRGFQSNSKVITTTDTMLEVVVNMKR 564



 Score = 41.1 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          L AS     SGL     RM ++  NIAN  T G
Sbjct: 3  LTASMWTGVSGLLAHGERMNVLGNNIANVNTVG 35


>gi|54297182|ref|YP_123551.1| flagellar hook protein FlgE [Legionella pneumophila str. Paris]
 gi|53750967|emb|CAH12378.1| Flagellar hook protein FlgE [Legionella pneumophila str. Paris]
          Length = 437

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  ++    R + AN QTI+    +  T +++
Sbjct: 392 SGRLEESNVDLTSELVNLISAQRNFQANAQTIRTGDAITQTIINI 436


>gi|126462484|ref|YP_001043598.1| flagellar basal body FlaE domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126104148|gb|ABN76826.1| flagellar basal body FlaE domain protein [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 423

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 26/45 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G +++ NV++  E   +    R Y A+ + ++ S+ +M T +++
Sbjct: 377 AGALEHANVDLTEELVHLITAQRNYQASAKAMETSNSLMQTIMNI 421


>gi|294140186|ref|YP_003556164.1| flagellar basal-body rod protein FlgF [Shewanella violacea DSS12]
 gi|293326655|dbj|BAJ01386.1| flagellar basal-body rod protein FlgF [Shewanella violacea DSS12]
          Length = 247

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +M   +  L+R
Sbjct: 198 ESGAVEGSNVNAVSEMVALIDIQRQFEMQVKMMKTAEEMDKASSSLMR 245


>gi|295690745|ref|YP_003594438.1| flagellar hook-associated protein FlgK [Caulobacter segnis ATCC
          21756]
 gi|295432648|gb|ADG11820.1| flagellar hook-associated protein FlgK [Caulobacter segnis ATCC
          21756]
          Length = 703

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 7/61 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L +    A SG+      +++ S+NIAN  T G       Y RKTIS   ++    G+ V
Sbjct: 3  LNSIMSTATSGMTAAQTGLRVTSDNIANVNTNG-------YVRKTISQSNMLSNGMGIGV 55

Query: 64 K 64
           
Sbjct: 56 S 56


>gi|114320057|ref|YP_741740.1| flagellar basal body FlaE domain-containing protein
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226451|gb|ABI56250.1| flagellar basal body FlaE domain protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 430

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  +   M    R + AN + I     +    L++
Sbjct: 384 ESGALEQSNVDISEQLVKMIVAQRNFSANAKMISTEDQITQEILNI 429


>gi|240145497|ref|ZP_04744098.1| flagellar basal body and hook protein [Roseburia intestinalis
          L1-82]
 gi|257202312|gb|EEV00597.1| flagellar basal body and hook protein [Roseburia intestinalis
          L1-82]
          Length = 551

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 20/77 (25%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
          ++ S + A SGL     +M +I  NIAN  T         ++  ++ F++V++       
Sbjct: 1  MMRSMYSAVSGLKTHQTKMDVIGNNIANVNTVA-------FKSSSVVFQDVLYQMTSNAS 53

Query: 57 ------GSGGVRVKKIG 67
                G+GGV  K+IG
Sbjct: 54 GANAATGTGGVNAKQIG 70



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E   M  T R + AN + I  S  ++   ++L R
Sbjct: 505 SGELEMSNVDLSTEFTQMIITQRGFQANSRIITTSDTLLEELVNLKR 551


>gi|218703525|ref|YP_002411044.1| lateral flagellar hook FlgE-like protein [Escherichia coli UMN026]
 gi|293403355|ref|ZP_06647446.1| flgE [Escherichia coli FVEC1412]
 gi|300900359|ref|ZP_07118535.1| flagellar hook protein FlgE [Escherichia coli MS 198-1]
 gi|218430622|emb|CAR11488.1| Lateral flagellar hook protein (FlgE-like) [Escherichia coli
           UMN026]
 gi|291429208|gb|EFF02228.1| flgE [Escherichia coli FVEC1412]
 gi|300356127|gb|EFJ71997.1| flagellar hook protein FlgE [Escherichia coli MS 198-1]
          Length = 400

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 355 SGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS   GV V 
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 65 KIGVD 69
               
Sbjct: 55 GTAQS 59


>gi|153948570|ref|YP_001399634.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 31758]
 gi|152960065|gb|ABS47526.1| flagellar hook protein flgE [Yersinia pseudotuberculosis IP 31758]
          Length = 402

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            SG ++  NV++  E   +    R Y A+ + I  +  MM     +L
Sbjct: 356 ESGALENSNVDITAELVGLMTAQRNYQASTKIISTNDSMMNALFQVL 402



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IAN+ L   + ++  IS NIAN+ T G       ++     F  +   S   GV V 
Sbjct: 2  SFSIANTALNAHTEQLNTISNNIANSATKG-------FKASRTEFASMYAQSQPLGVTVS 54

Query: 65 KI 66
           +
Sbjct: 55 GV 56


>gi|320353949|ref|YP_004195288.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
 gi|320122451|gb|ADW17997.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
          Length = 423

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  D+      Y AN + I  +++M+   ++L+R
Sbjct: 381 ELSNVDLATEFVDLITIQNAYSANSKVITTTNEMLDELVNLIR 423


>gi|160939658|ref|ZP_02087006.1| hypothetical protein CLOBOL_04550 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437449|gb|EDP15213.1| hypothetical protein CLOBOL_04550 [Clostridium bolteae ATCC
           BAA-613]
          Length = 550

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E ADM  T R + AN + I  S  ++   ++L R
Sbjct: 508 EMSNVDISTEFADMIVTQRGFQANSRIITVSDSILEELVNLKR 550



 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 7/44 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +     ++ +I  NIAN  T G       ++     F++V + +
Sbjct: 1  MQAHQTKLDVIGNNIANVNTYG-------FKSSRARFQDVYYQT 37


>gi|54308098|ref|YP_129118.1| flagellar basal body rod protein FlgF [Photobacterium profundum
           SS9]
 gi|46912524|emb|CAG19316.1| putative flagellar basal-body rod protein FlgF [Photobacterium
           profundum SS9]
          Length = 249

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 83  VANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            A+A      G ++  NVN + E   M +  R +   ++ +K + +M   +  LLR
Sbjct: 192 DADAGVTLLKGALEGSNVNAVGEMTSMIDLQRHFEMQVKIMKTAEEMDQASASLLR 247


>gi|260886641|ref|ZP_05897904.1| flagellar hook protein FlgE [Selenomonas sputigena ATCC 35185]
 gi|330839527|ref|YP_004414107.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
           35185]
 gi|260863784|gb|EEX78284.1| flagellar hook protein FlgE [Selenomonas sputigena ATCC 35185]
 gi|329747291|gb|AEC00648.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
           35185]
          Length = 496

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV+V  E ADM  T R + +N + I    +M+ T +++ R
Sbjct: 454 EMSNVDVANEFADMVVTQRGFQSNSKVITVGDEMLETVINMKR 496



 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 11/59 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M  L +      SGL     RM +I  NIAN  T G       ++   ++F + ++ + 
Sbjct: 2  MRSLFSGV----SGLKSHQTRMDVIGNNIANVNTIG-------FKSSRVTFADTLYQTQ 49


>gi|238927421|ref|ZP_04659181.1| flagellar basal body rod protein [Selenomonas flueggei ATCC
          43531]
 gi|238884703|gb|EEQ48341.1| flagellar basal body rod protein [Selenomonas flueggei ATCC
          43531]
          Length = 139

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 9/57 (15%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-RRKTISFEEVMHGSGG 60
           +   +++  L+  + R +++S NIAN  T        PY RR  + FE+++    G
Sbjct: 8  TSVIDVSSRALSAANLRHEVLSNNIANVNT--------PYFRRSHVRFEDLLRKELG 56


>gi|188534170|ref|YP_001907967.1| flagellar hook protein FlgE [Erwinia tasmaniensis Et1/99]
 gi|188029212|emb|CAO97084.1| Flagellar biosynthesis, hook protein [Erwinia tasmaniensis Et1/99]
          Length = 402

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 AGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 38.8 bits (90), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NI+N+ T G       ++  T++F ++  GS    G +V  + 
Sbjct: 6  AVSGLNAASSNLDVIGNNISNSATAG-------FKSSTVAFADMFAGSKVGLGTKVASVV 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|293408367|ref|ZP_06652206.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471545|gb|EFF14028.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 400

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 355 SGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS   GV V 
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 65 KIGVD 69
               
Sbjct: 55 GTAQS 59


>gi|161777623|ref|YP_427619.2| flagellar hook protein FlgE [Rhodospirillum rubrum ATCC 11170]
          Length = 460

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M  L +S ++A S +  QS+ +  IS N+AN+ T G       Y+    SF  ++ G+G
Sbjct: 1  MSSLSSSLNVAVSAMNAQSSSVSAISNNLANSSTIG-------YKTSNASFYSLVTGTG 52


>gi|153831692|ref|ZP_01984359.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01]
 gi|148872202|gb|EDL71019.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01]
          Length = 457

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 16/90 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SGGV 61
          +IA SGL      + + ++N+AN  T G       Y R+      V  G         GV
Sbjct: 5  NIALSGLNANRVALDVTAQNVANINTPG-------YSRQQALTASVGDGKYNKLSPGMGV 57

Query: 62 RVKKIGVDQSTF--VEEFDPGHPVANASGI 89
           V  I      F   + +      A ++G 
Sbjct: 58 EVTSIRRVTDQFLVKQTWSTNSLAAYSAGY 87


>gi|94987302|ref|YP_595235.1| flagellar basal body rod protein FlgB [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731551|emb|CAJ54914.1| Flagellar basal body protein [Lawsonia intracellularis PHE/MN1-00]
          Length = 137

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 21/116 (18%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV----RVKKIGVDQ 70
           + +Q  R  +I  NIAN  T         YR +TI FE+ +  + G+    R+ +   + 
Sbjct: 16  MDMQLQRQNVIMSNIANVNTPR-------YRPRTIEFEDQLQKALGLDMRGRMSRTEENH 68

Query: 71  STFVEEFDPGHPVANASGIVKYP-------NVNVLVETADMRETNRLYMANLQTIK 119
                 F+P    A     +K P        VN+  E A+M + +  Y A  Q IK
Sbjct: 69  LP--AVFNPEGFNAEWDKAIK-PTVVHGEDRVNLDKEMANMAKNSLQYNALTQVIK 121


>gi|330445348|ref|ZP_08309000.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
          mandapamensis svers.1.1.]
 gi|328489539|dbj|GAA03497.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
          mandapamensis svers.1.1.]
          Length = 467

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          S +IA SGL      +   S NIANA T           D Y     S  +   G GGV+
Sbjct: 2  SMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEFGDVYSSSIFSNAKTTTG-GGVQ 60

Query: 63 VKKIGVDQSTFVEEFDPGHPV 83
             +          +   +P+
Sbjct: 61 TSTVAQQFHEGSSIY-TNNPL 80



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 23/48 (47%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  SG ++  N+++  E  D+    R + A+ + +  ++ +    L +
Sbjct: 419 AIKSGTLEQSNIDMTQELVDLITAQRNFQASSRALDVNNQLQQNILQI 466


>gi|313624712|gb|EFR94667.1| flagellar hook protein FlgE [Listeria innocua FSL J1-023]
          Length = 411

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KK 65
            
Sbjct: 54 AG 55



 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 369 EGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411


>gi|59712481|ref|YP_205257.1| flagellar hook protein FlgE [Vibrio fischeri ES114]
 gi|197335363|ref|YP_002156700.1| flagellar hook protein [Vibrio fischeri MJ11]
 gi|24459277|gb|AAL86630.1| FlgE [Vibrio fischeri ES114]
 gi|59480582|gb|AAW86369.1| flagellar hook protein FlgE [Vibrio fischeri ES114]
 gi|197316853|gb|ACH66300.1| flagellar hook protein [Vibrio fischeri MJ11]
          Length = 432

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  D+    R + AN +++   + +    L +
Sbjct: 386 QSGTLEQSNIDMTQELVDLISAQRNFQANSRSLDVHNQLQQNILQI 431



 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 4/39 (10%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG----DTPGSDPY 44
          +A SGLA     +   S N+ANA T G         D Y
Sbjct: 4  VALSGLAAAQKDLNTTSNNLANANTYGFKESRAEFGDVY 42


>gi|71281915|ref|YP_268223.1| flagellar basal-body rod protein FlgF [Colwellia psychrerythraea
           34H]
 gi|71147655|gb|AAZ28128.1| flagellar basal-body rod protein FlgF [Colwellia psychrerythraea
           34H]
          Length = 247

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NVN + E  DM    R +   L+ +K + ++ ++   LLR
Sbjct: 200 GALESSNVNPINEMTDMIALQRQFEMQLKMMKTAEEIDSSASSLLR 245


>gi|289433975|ref|YP_003463847.1| flagellar hook protein FlgE, putative [Listeria seeligeri serovar
          1/2b str. SLCC3954]
 gi|289170219|emb|CBH26759.1| flagellar hook protein FlgE, putative [Listeria seeligeri serovar
          1/2b str. SLCC3954]
 gi|313634374|gb|EFS00969.1| flagellar hook protein FlgE [Listeria seeligeri FSL N1-067]
 gi|313639059|gb|EFS04046.1| flagellar hook protein FlgE [Listeria seeligeri FSL S4-171]
          Length = 411

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KK 65
            
Sbjct: 54 AG 55



 Score = 33.7 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 369 EGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411


>gi|292492363|ref|YP_003527802.1| flagellar basal body FlaE domain protein [Nitrosococcus
          halophilus Nc4]
 gi|291580958|gb|ADE15415.1| flagellar basal body FlaE domain protein [Nitrosococcus
          halophilus Nc4]
          Length = 425

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 7/49 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          S + + SGL   S+ + ++S NIANA TTG       ++R    F ++ 
Sbjct: 2  SFNTSLSGLNAASSDLDVVSNNIANANTTG-------FKRSRAEFADIF 43



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G ++  NV++  E   +    R + AN + I+ +  +  + L++
Sbjct: 381 GALESSNVDLTAELVHLITAQRNFQANARAIETASTLTDSILNI 424


>gi|315281358|ref|ZP_07869998.1| flagellar hook protein FlgE [Listeria marthii FSL S4-120]
 gi|313614997|gb|EFR88501.1| flagellar hook protein FlgE [Listeria marthii FSL S4-120]
          Length = 411

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KK 65
            
Sbjct: 54 AG 55



 Score = 33.7 bits (77), Expect = 8.5,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 369 EGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411


>gi|253702499|ref|YP_003023688.1| hypothetical protein GM21_3913 [Geobacter sp. M21]
 gi|251777349|gb|ACT19930.1| protein of unknown function DUF1078 domain protein [Geobacter sp.
           M21]
          Length = 294

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E   M  T R Y AN +TI  S  M    L+L+R
Sbjct: 252 EQSTVDLANEFVKMITTQRAYSANSKTITTSDQMTQEVLNLIR 294


>gi|331671804|ref|ZP_08372600.1| LfgE [Escherichia coli TA280]
 gi|331070793|gb|EGI42152.1| LfgE [Escherichia coli TA280]
          Length = 400

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           SG+++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 355 SGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS  + V   
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTAQS 59


>gi|254524254|ref|ZP_05136309.1| flagellar biosynthesis hook protein [Stenotrophomonas sp. SKA14]
 gi|219721845|gb|EED40370.1| flagellar biosynthesis hook protein [Stenotrophomonas sp. SKA14]
          Length = 407

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +G ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 361 QAGSLEASTVDLTEQLVNMITAQRNFQANAQMITTQDQITQTVINI 406



 Score = 39.1 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 17/71 (23%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------- 59
           +++ SG+   ++ + + + N+AN  TTG       ++     F ++   +G        
Sbjct: 3  FNVSLSGINAANSDLSVTANNVANVNTTG-------FKESRAEFADLFSATGYGLSKNAV 55

Query: 60 --GVRVKKIGV 68
            GVRV  +  
Sbjct: 56 GSGVRVSNVAQ 66


>gi|294508678|ref|YP_003572737.1| flagellar basal-body rod protein [Salinibacter ruber M8]
 gi|294345007|emb|CBH25785.1| flagellar basal-body rod protein [Salinibacter ruber M8]
          Length = 260

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G V+  NV+ + E  +M E  R + A  +TI+ +  ++   
Sbjct: 212 QGKVETSNVDPVTELTNMIEIQRQFEAQQKTIQTTDGVLGRA 253


>gi|239628984|ref|ZP_04672015.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519130|gb|EEQ58996.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 541

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E ADM  T R + AN + I  S  ++   ++L R
Sbjct: 499 EMSNVDISTEFADMIVTQRGFQANSRIITVSDSILEELVNLKR 541



 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 7/44 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +     ++ +I  NIAN  T G       ++     F++V + +
Sbjct: 1  MQAHQTKLDVIGNNIANVNTYG-------FKSSRARFQDVYYQT 37


>gi|90411006|ref|ZP_01219020.1| putative flagellar basal-body rod protein FlgF [Photobacterium
           profundum 3TCK]
 gi|90328219|gb|EAS44530.1| putative flagellar basal-body rod protein FlgF [Photobacterium
           profundum 3TCK]
          Length = 249

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 83  VANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            A+A      G ++  NVN + E   M +  R +   ++ +K + +M   +  LLR
Sbjct: 192 DADAGVTLLKGALEGSNVNAVGEMTSMIDLQRHFEMQVKIMKTAEEMDQASASLLR 247


>gi|16799780|ref|NP_470048.1| flagellar hook protein FlgE [Listeria innocua Clip11262]
 gi|16802739|ref|NP_464224.1| flagellar hook protein FlgE [Listeria monocytogenes EGD-e]
 gi|47095263|ref|ZP_00232874.1| flagellar hook protein FlgE, putative [Listeria monocytogenes
          str. 1/2a F6854]
 gi|116872086|ref|YP_848867.1| flagellar hook protein FlgE [Listeria welshimeri serovar 6b str.
          SLCC5334]
 gi|224498779|ref|ZP_03667128.1| flagellar hook protein FlgE [Listeria monocytogenes Finland 1988]
 gi|224501998|ref|ZP_03670305.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-561]
 gi|254829354|ref|ZP_05234041.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N3-165]
 gi|254900067|ref|ZP_05259991.1| flagellar hook protein FlgE [Listeria monocytogenes J0161]
 gi|254911380|ref|ZP_05261392.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254935707|ref|ZP_05267404.1| flagellar hook protein FlgE [Listeria monocytogenes F6900]
 gi|255027496|ref|ZP_05299482.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-003]
 gi|16410086|emb|CAC98775.1| lmo0697 [Listeria monocytogenes EGD-e]
 gi|16413157|emb|CAC95937.1| lin0705 [Listeria innocua Clip11262]
 gi|47016334|gb|EAL07256.1| flagellar hook protein FlgE, putative [Listeria monocytogenes
          str. 1/2a F6854]
 gi|116740964|emb|CAK20084.1| flagellar hook protein FlgE, putative [Listeria welshimeri
          serovar 6b str. SLCC5334]
 gi|258601767|gb|EEW15092.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N3-165]
 gi|258608290|gb|EEW20898.1| flagellar hook protein FlgE [Listeria monocytogenes F6900]
 gi|293589317|gb|EFF97651.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|313620066|gb|EFR91579.1| flagellar hook protein FlgE [Listeria innocua FSL S4-378]
          Length = 411

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KK 65
            
Sbjct: 54 AG 55



 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 369 EGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411


>gi|302343756|ref|YP_003808285.1| flagellar basal-body rod protein FlgF [Desulfarculus baarsii DSM
           2075]
 gi|301640369|gb|ADK85691.1| flagellar basal-body rod protein FlgF [Desulfarculus baarsii DSM
           2075]
          Length = 231

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 3/53 (5%)

Query: 79  PGHPVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           P  P A+     G ++  NV V+ +  +M    R + +  + +    ++    
Sbjct: 172 PTAPAADVVVNQGSLEMSNVTVVDQMVNMITAQRAFESYQKAVHSLQEIDQKA 224


>gi|222053611|ref|YP_002535973.1| protein of unknown function DUF1078 domain protein [Geobacter sp.
           FRC-32]
 gi|221562900|gb|ACM18872.1| protein of unknown function DUF1078 domain protein [Geobacter sp.
           FRC-32]
          Length = 293

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  +   M  T R Y AN +TI  + +M    L+L R
Sbjct: 251 EQSNVDLASQFVKMIITQRAYSANSKTITTADEMTQEVLNLKR 293


>gi|163789628|ref|ZP_02184066.1| hypothetical protein CAT7_09300 [Carnobacterium sp. AT7]
 gi|159875160|gb|EDP69226.1| hypothetical protein CAT7_09300 [Carnobacterium sp. AT7]
          Length = 251

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 18/38 (47%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            ++  NV++     +M    R Y  NL+  + + +M +
Sbjct: 207 YLEASNVDLASSMTEMILAQRSYSMNLKVAQGTDEMAS 244



 Score = 43.0 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
            I+ SG+     +M ++S +IAN  TTG       Y+ K ISF E++
Sbjct: 5  LSISKSGMNAIQNQMDVVSNDIANINTTG-------YKSKNISFNELL 45


>gi|255523679|ref|ZP_05390645.1| protein of unknown function DUF1078 domain protein [Clostridium
           carboxidivorans P7]
 gi|255512548|gb|EET88822.1| protein of unknown function DUF1078 domain protein [Clostridium
           carboxidivorans P7]
          Length = 264

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 30/107 (28%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------------- 56
           + S +  Q  ++  IS NIAN  TTG       Y+R+ +SF+++++              
Sbjct: 8   SKSAMNAQQDKLDSISNNIANESTTG-------YKREDVSFQDLVYETLNRKGYPNSGDN 60

Query: 57  -----GSGGVRVKKIGVD--QSTFVEEFDPGHPVANASGI--VKYPN 94
                   GV+  +   D  Q    +         +  G   V  PN
Sbjct: 61  PKEPINGTGVKATQWYRDNTQGPLRQTDSKTDFAIDGEGYFRVTLPN 107



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            G ++  NVN+  E  DM    R +  + + +K   +M
Sbjct: 217 QGKLEESNVNIGKEMTDMIIAQRAFELSSKAMKTGDEM 254


>gi|220904530|ref|YP_002479842.1| hypothetical protein Ddes_1261 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868829|gb|ACL49164.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 808

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   M  T R + AN + I     M+ T + + R
Sbjct: 765 IEQSNVDMTTEFVQMISTQRGFQANSKGITTVDTMLETVIGMKR 808



 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          L AS   + SGL     +M ++  NIAN  T G
Sbjct: 3  LSASMWTSVSGLLSHGQKMNVVGNNIANVSTLG 35


>gi|254830312|ref|ZP_05234967.1| flagellar hook protein FlgE [Listeria monocytogenes 10403S]
          Length = 411

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KK 65
            
Sbjct: 54 AG 55



 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 369 EGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411


>gi|46906948|ref|YP_013337.1| flagellar hook protein FlgE [Listeria monocytogenes serotype 4b
          str. F2365]
 gi|47091659|ref|ZP_00229455.1| flagellar hook protein FlgE, putative [Listeria monocytogenes
          str. 4b H7858]
 gi|217965205|ref|YP_002350883.1| flagellar hook protein [Listeria monocytogenes HCC23]
 gi|226223328|ref|YP_002757435.1| flagellar hook protein FlgE [Listeria monocytogenes Clip81459]
 gi|254824023|ref|ZP_05229024.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-194]
 gi|254853099|ref|ZP_05242447.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-503]
 gi|254932023|ref|ZP_05265382.1| flagellar hook protein FlgE [Listeria monocytogenes HPB2262]
 gi|300764509|ref|ZP_07074502.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N1-017]
 gi|46880214|gb|AAT03514.1| putative flagellar hook protein FlgE [Listeria monocytogenes
          serotype 4b str. F2365]
 gi|47019978|gb|EAL10715.1| flagellar hook protein FlgE, putative [Listeria monocytogenes
          str. 4b H7858]
 gi|217334475|gb|ACK40269.1| flagellar hook protein [Listeria monocytogenes HCC23]
 gi|225875790|emb|CAS04493.1| Putative flagellar hook protein FlgE [Listeria monocytogenes
          serotype 4b str. CLIP 80459]
 gi|258606448|gb|EEW19056.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-503]
 gi|293583575|gb|EFF95607.1| flagellar hook protein FlgE [Listeria monocytogenes HPB2262]
 gi|293593251|gb|EFG01012.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-194]
 gi|300514863|gb|EFK41917.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N1-017]
 gi|307570236|emb|CAR83415.1| flagellar hook protein [Listeria monocytogenes L99]
 gi|332311122|gb|EGJ24217.1| Flagellar hook protein FlgE [Listeria monocytogenes str. Scott A]
          Length = 411

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KK 65
            
Sbjct: 54 AG 55



 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 369 EGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411


>gi|220913724|ref|YP_002489033.1| hypothetical protein Achl_2983 [Arthrobacter chlorophenolicus A6]
 gi|219860602|gb|ACL40944.1| protein of unknown function DUF1078 domain protein [Arthrobacter
           chlorophenolicus A6]
          Length = 390

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A+G ++  NV++  E  ++    R + AN + I  S +++    +L R
Sbjct: 343 ATGSLEMSNVDLSQEFTNLIVAQRGFQANARIITTSDEVLQELSNLKR 390



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          SGL      + +   NIAN  TTG
Sbjct: 10 SGLRAHQTMLDVTGNNIANVNTTG 33


>gi|290893994|ref|ZP_06556969.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-071]
 gi|290556440|gb|EFD89979.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-071]
          Length = 411

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KK 65
            
Sbjct: 54 AG 55



 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 369 EGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411


>gi|300722682|ref|YP_003711972.1| flagellar hook protein [Xenorhabdus nematophila ATCC 19061]
 gi|139522504|gb|ABO77656.1| FlgE [Xenorhabdus nematophila]
 gi|297629189|emb|CBJ89785.1| flagellar biosynthesis; hook protein [Xenorhabdus nematophila ATCC
           19061]
          Length = 398

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M  + R Y +N QTIK    ++ T + +
Sbjct: 353 SGALEASNVDMSQELVNMIVSQRNYQSNAQTIKTQDQILQTLVSM 397



 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   ++ + +I  NI+N+ T G       ++  + +F +V  GS    GV+V
Sbjct: 2  SFSQAVSGLNAAASNLDVIGNNISNSATFG-------FKSSSAAFADVFSGSEVGLGVKV 54

Query: 64 KKIGV 68
            +  
Sbjct: 55 SGMVQ 59


>gi|42524754|ref|NP_970134.1| hypothetical protein Bd3395 [Bdellovibrio bacteriovorus HD100]
 gi|39576964|emb|CAE78193.1| flgE [Bdellovibrio bacteriovorus HD100]
          Length = 427

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E  +M +  R + AN +TI  + +++   + L R
Sbjct: 385 ERSTVDLATEFVNMIQNQRGFQANAKTITTTDELLNEVIQLKR 427



 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          +++S +   SG+  Q   + +I +NIANA T G       ++     F+++
Sbjct: 3  ILSSLYTGVSGMTAQGEALGVIGDNIANANTIG-------FKASRAEFQDI 46


>gi|284801027|ref|YP_003412892.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5578]
 gi|284994169|ref|YP_003415937.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5923]
 gi|284056589|gb|ADB67530.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5578]
 gi|284059636|gb|ADB70575.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5923]
          Length = 411

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KK 65
            
Sbjct: 54 AG 55



 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 369 EGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411


>gi|254994099|ref|ZP_05276289.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-064]
          Length = 208

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KK 65
            
Sbjct: 54 AG 55


>gi|158422271|ref|YP_001523563.1| flagellar hook protein FlgE [Azorhizobium caulinodans ORS 571]
 gi|158329160|dbj|BAF86645.1| flagellar basal body FlaE protein [Azorhizobium caulinodans ORS
          571]
          Length = 430

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 29/61 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  +   + SG+  QS ++  IS+NIAN+ TTG    +  +    +      + SG V  
Sbjct: 3  LYGTLRTSVSGMNAQSNKLGTISDNIANSNTTGYKKATTDFSSLIVDSSTSEYNSGSVNT 62

Query: 64 K 64
          K
Sbjct: 63 K 63



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV+V  E  DM    R Y AN +  +   D++   ++L R
Sbjct: 390 SNVDVASELTDMIVAQRDYTANSKVFQTGTDLLDVLMNLKR 430


>gi|119714998|ref|YP_921963.1| hypothetical protein Noca_0751 [Nocardioides sp. JS614]
 gi|119535659|gb|ABL80276.1| protein of unknown function DUF1078 domain protein [Nocardioides
           sp. JS614]
          Length = 282

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G V+  NV++  E  ++    R + A+ + I  S  ++   +++ R
Sbjct: 237 GSVEMSNVDLAAEFTNLILAQRGFQASSRVITTSDQVLEDLVNIKR 282


>gi|323495377|ref|ZP_08100454.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546]
 gi|323310300|gb|EGA63487.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546]
          Length = 434

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +SG ++  N+++  E  D+    R + AN ++++  +      L +
Sbjct: 388 SSGTLEQSNIDMTQELVDLISAQRNFQANSRSLEVHNQTQQNILQI 433



 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 6/78 (7%)

Query: 10 IANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +A SGL+     +   S NIANA T           D Y     +  +   G  GV+  K
Sbjct: 4  VALSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTHAKTTPGQ-GVQAAK 62

Query: 66 IGVDQSTFVEEFDPGHPV 83
          +          +   +P+
Sbjct: 63 VAQQFHEGSSIY-TNNPM 79


>gi|320354325|ref|YP_004195664.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
 gi|320122827|gb|ADW18373.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
          Length = 434

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M  T R + AN + I    +M++  ++L R
Sbjct: 392 EQSNVDMGQEFVKMITTQRGFQANSKIITTVDEMLSELINLKR 434


>gi|310816852|ref|YP_003964816.1| flagellar hook protein FlgE [Ketogulonicigenium vulgare Y25]
 gi|308755587|gb|ADO43516.1| flagellar hook protein FlgE [Ketogulonicigenium vulgare Y25]
          Length = 432

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 88  GIV-KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G   +   V+V  E   M +T R Y +N + I+   +M+  T +L R
Sbjct: 386 GYASEGSAVDVATELTQMIQTQRAYSSNAKVIQTVDEMLQETTNLKR 432



 Score = 39.9 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 16/81 (19%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          + +S +   +GL+  + ++  IS+NIAN+ T G       Y+R    F  ++ GS     
Sbjct: 3  ISSSMNAGVAGLSANANKLATISDNIANSSTNG-------YKRAQTEFYAMVIGSSSTKY 55

Query: 59 --GGVRV--KKIGVDQSTFVE 75
            GGVR    ++  ++   V 
Sbjct: 56 TAGGVRTTATRVIDERGPLVS 76


>gi|304404253|ref|ZP_07385915.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
 gi|304347231|gb|EFM13063.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
          Length = 272

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  +G ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 223 AIIAGQLEMSNVDLTSEFTEMIIAQRGFQANSRIITTSDEVLQEVVNLKR 272



 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 8/59 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-HGSGGV 61
          ++ S +   SG+     ++ +I  NIAN  T G       ++   + F++++     GV
Sbjct: 1  MLRSMYSGVSGMRGFQTKLDVIGNNIANVNTVG-------FKAGRVMFKDILSQNVAGV 52


>gi|255521910|ref|ZP_05389147.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-175]
          Length = 411

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KK 65
            
Sbjct: 54 AG 55



 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 369 EGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411


>gi|218678737|ref|ZP_03526634.1| flagellar hook protein FlgE [Rhizobium etli CIAT 894]
          Length = 112

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 65  QSGALESSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 112


>gi|229917023|ref|YP_002885669.1| flagellar basal body rod protein [Exiguobacterium sp. AT1b]
 gi|229468452|gb|ACQ70224.1| flagellar basal body rod protein [Exiguobacterium sp. AT1b]
          Length = 257

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN+    AD+  T R + AN + ++         +++ R
Sbjct: 209 QGFIEEANVNLDQTMADLMMTYRQFEANQKVVQAYDKSAERAIEIAR 255


>gi|206896555|ref|YP_002246691.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
          5265]
 gi|206739172|gb|ACI18250.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
          5265]
          Length = 519

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 7/42 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          SGL V   R+ +IS NIAN  TT        Y+    +F +V
Sbjct: 10 SGLKVHQIRIDVISNNIANVNTTA-------YKAARATFSDV 44



 Score = 40.3 bits (94), Expect = 0.098,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 23/46 (50%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  ++  T R + A+ + I  S ++    + L R
Sbjct: 474 GALESSNVDLAEEFTNLIITQRGFQASTRVITTSDEVTQDIIGLKR 519


>gi|149911702|ref|ZP_01900310.1| flagellar hook protein FlgE [Moritella sp. PE36]
 gi|149805232|gb|EDM65249.1| flagellar hook protein FlgE [Moritella sp. PE36]
          Length = 435

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG-GV 61
          S +IA SG+      +   + NIAN  TTG         D Y   T  F       G GV
Sbjct: 2  SFNIALSGINAAQKDLNTTANNIANVNTTGFKESRAEFGDVYA--TSIFSNAKTSVGNGV 59

Query: 62 RVKKIGV 68
              I  
Sbjct: 60 ATSHIAQ 66



 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NVN+  E  ++    R Y AN +T++ +  +  T L +
Sbjct: 394 EQSNVNLTSELVNLITAQRNYQANSRTLEVNSKLQDTVLQI 434


>gi|154253004|ref|YP_001413828.1| flagellar basal body rod protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154156954|gb|ABS64171.1| flagellar basal body rod protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 256

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN ++E  +M E  R Y +  + I Q+  M    + 
Sbjct: 207 QGALEGSNVNPILEMTNMIEVTRSYASAQKLIDQADQMRRKAIQ 250


>gi|296331269|ref|ZP_06873741.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676256|ref|YP_003867928.1| putative flagellar hook-basal body protein [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296151384|gb|EFG92261.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414500|gb|ADM39619.1| putative flagellar hook-basal body protein [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 269

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  +  D+  + R Y  N +TI     M+
Sbjct: 223 EQGSLEMSNVDISEQMTDLITSQRSYQLNSRTITMGDQML 262



 Score = 34.1 bits (78), Expect = 7.2,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A++ L     ++  IS N++N+ TTG       Y+ K  +F E++   
Sbjct: 1  MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTG-------YKAKDTNFSELVRQQ 48


>gi|187932866|ref|YP_001885049.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund
           17B]
 gi|187721019|gb|ACD22240.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund
           17B]
          Length = 366

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A+ + I    +++ T   L+R
Sbjct: 320 QGALESSNVDLTEQFTDMITATRAFQASSKMITTGDEILQTITGLMR 366



 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++ S +   SG+     ++ +I  NIAN  TTG       ++  +  F ++++ + G
Sbjct: 1  MLRSMYSGISGMKTNQVKLDVIGNNIANVSTTG-------FKSSSARFSDMLYQNAG 50


>gi|186477697|ref|YP_001859167.1| flagellar basal body FlaE domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184194156|gb|ACC72121.1| flagellar basal body FlaE domain protein [Burkholderia phymatum
           STM815]
          Length = 501

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  ++    R Y AN QTIK    +  T ++L
Sbjct: 463 SNVDLTSELVNLITAQRNYQANAQTIKTQQTVDQTLINL 501



 Score = 37.2 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S+ + +I  NIANA T G   G+         F ++   S    V     IG  
Sbjct: 8  SGLAGASSDLDVIGNNIANANTVGFKQGA-------AQFADMYANSVATAVNNQIGIGTR 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           S   + F  G         H   N SG  +  N
Sbjct: 61 MSQVEQNFSQGTISTDDIALHVAINGSGFFQMSN 94


>gi|113969606|ref|YP_733399.1| flagellar hook protein FlgE [Shewanella sp. MR-4]
 gi|113884290|gb|ABI38342.1| flagellar basal body FlaE domain protein [Shewanella sp. MR-4]
          Length = 453

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHG-SGGV 61
          S +IA SG++     +   + NIANA T G        +D Y      F        GGV
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYA--NSIFSNSKTAVGGGV 59

Query: 62 RVKKIGV 68
             ++  
Sbjct: 60 ATSQVAQ 66


>gi|261253614|ref|ZP_05946187.1| flagellar hook protein FlgE [Vibrio orientalis CIP 102891]
 gi|260937005|gb|EEX92994.1| flagellar hook protein FlgE [Vibrio orientalis CIP 102891]
          Length = 434

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +SG ++  N+++  E  D+    R + AN ++++  +      L +
Sbjct: 388 SSGTLEQSNIDMTQELVDLISAQRNFQANSRSLEVHNQTQQNILQI 433



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +A SGL+     +   S NIANA T G         D Y     +  +   G  GV+  K
Sbjct: 4  VALSGLSAAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLFTHAKTTPGQ-GVQAAK 62

Query: 66 IGVDQSTFVEEFDPGHPV 83
          +          +   +P+
Sbjct: 63 VAQQFHEGSSIY-TNNPM 79


>gi|169826609|ref|YP_001696767.1| flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
 gi|168991097|gb|ACA38637.1| Flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
          Length = 279

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           G ++  NVN+  E  ++ +T R Y  N +T+  +  M+
Sbjct: 235 GTLEMSNVNLSKEMTELIQTQRSYQFNARTVTLADQML 272



 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  IS NIAN+ TTG       ++ K  +F E+++  
Sbjct: 19 LDTISNNIANSSTTG-------FKAKEATFNELLYQQ 48


>gi|91791429|ref|YP_561080.1| protein of unknown function DUF1078-like protein [Shewanella
           denitrificans OS217]
 gi|91713431|gb|ABE53357.1| protein of unknown function DUF1078-like protein [Shewanella
           denitrificans OS217]
          Length = 392

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV++  E ADM    R Y A+ + +  ++ M+    +
Sbjct: 347 IEMSNVDLSQEFADMLVIQRGYQASSRILNVANQMIEQLYE 387



 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++ + +   SGL   S  +  +S NIAN  T G       Y+ 
Sbjct: 1  MLQAFYTGLSGLNSYSKNLDNVSNNIANMNTAGYRGMDSFYQA 43


>gi|332703535|ref|ZP_08423623.1| flagellar hook-basal body protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553684|gb|EGJ50728.1| flagellar hook-basal body protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 556

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   M  T R + AN + I     ++   ++L R
Sbjct: 513 IEQSNVDMADEFVQMITTQRGFQANGKVITTVDTLLGEVINLKR 556


>gi|330445349|ref|ZP_08309001.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489540|dbj|GAA03498.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 249

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 79  PGHPVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P    AN   A G+++  NVN + E   M +  R +   ++ +K + +M  ++  L+R
Sbjct: 190 PMDADANVTLAKGMLEGSNVNAVSEMTSMIDLQRHFEMQVKLMKTAEEMDKSSSSLMR 247


>gi|302390534|ref|YP_003826355.1| flagellar basal-body rod protein FlgF [Thermosediminibacter oceani
           DSM 16646]
 gi|302201162|gb|ADL08732.1| flagellar basal-body rod protein FlgF [Thermosediminibacter oceani
           DSM 16646]
          Length = 260

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E  ++    R Y AN + ++   D +   ++
Sbjct: 212 QGALERANVNAVSEMVNLISAFRAYEANQRMVRAHDDTLAGAVN 255



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          +I   + + SG+  + AR  +IS N+AN  TTG       +R 
Sbjct: 1  MIRGLYTSASGMLAEMARTDVISNNLANINTTGFKKDRAVFRA 43


>gi|228958023|ref|ZP_04119759.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228801648|gb|EEM48529.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 166

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 51  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 103

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 104 LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 159

Query: 125 MTTT 128
               
Sbjct: 160 NQAA 163


>gi|114046838|ref|YP_737388.1| flagellar hook protein FlgE [Shewanella sp. MR-7]
 gi|113888280|gb|ABI42331.1| flagellar basal body FlaE domain protein [Shewanella sp. MR-7]
          Length = 453

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHG-SGGV 61
          S +IA SG++     +   + NIANA T G        +D Y      F        GGV
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYA--NSIFSNSKTAVGGGV 59

Query: 62 RVKKIGV 68
             ++  
Sbjct: 60 ATSQVAQ 66


>gi|292487939|ref|YP_003530814.1| flagellar hook protein FlgE [Erwinia amylovora CFBP1430]
 gi|292899158|ref|YP_003538527.1| flagellar hook protein FlgE [Erwinia amylovora ATCC 49946]
 gi|291199006|emb|CBJ46117.1| flagellar hook protein FlgE [Erwinia amylovora ATCC 49946]
 gi|291553361|emb|CBA20406.1| Flagellar hook protein flgE [Erwinia amylovora CFBP1430]
 gi|312172060|emb|CBX80317.1| Flagellar hook protein flgE [Erwinia amylovora ATCC BAA-2158]
          Length = 402

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 AGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 38.8 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NI+N+ T G       ++  T++F ++  GS    G +V  + 
Sbjct: 6  AVSGLNAASSNLDVIGNNISNSATAG-------FKSSTVAFADMFAGSKVGLGTKVASVV 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|261407975|ref|YP_003244216.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
 gi|261284438|gb|ACX66409.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
          Length = 274

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 27/50 (54%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  +G ++  NV++  E ++M    R + AN + I  S +++   ++L R
Sbjct: 225 AIIAGQLEMSNVDLTGEFSEMIVAQRGFQANSRIITTSDEVLQEVVNLKR 274



 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 19/76 (25%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          ++ S +   SG+     ++ +I  NIAN  T G       ++   + F++++        
Sbjct: 1  MLRSMYSGISGMRGFQTKLDVIGNNIANVNTVG-------FKAGRVMFKDILSQTMSGVT 53

Query: 56 ----HGSGGVRVKKIG 67
                SGGV  K+IG
Sbjct: 54 PGTDDPSGGVNAKQIG 69


>gi|134300250|ref|YP_001113746.1| flagellar basal-body rod protein FlgB [Desulfotomaculum reducens
           MI-1]
 gi|134052950|gb|ABO50921.1| flagellar basal-body rod protein FlgB [Desulfotomaculum reducens
           MI-1]
          Length = 132

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 39/130 (30%)

Query: 1   MDYLIA-SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--- 56
           MD   + +  I   GL   +AR ++I+ NIAN  T G       +++  +SFE+ +    
Sbjct: 1   MDVFNSPTLMILQQGLDAGAARQRVIANNIANFNTPG-------FKKSYVSFEDQLKAAL 53

Query: 57  GSGGVRVKK-----IGVDQSTFV----------EEFDPGHPVANASGIVKYPNVNVLVET 101
           G+ GV +K      IG                   +D               NV+V  E 
Sbjct: 54  GNSGVSLKGTHPLHIGTSNREIKPEIKQVEETTMRYDGN-------------NVDVDEEM 100

Query: 102 ADMRETNRLY 111
            ++      Y
Sbjct: 101 VNLAAATIEY 110


>gi|120554034|ref|YP_958385.1| flagellar basal body rod protein FlgF [Marinobacter aquaeolei VT8]
 gi|120323883|gb|ABM18198.1| flagellar basal-body rod protein FlgF [Marinobacter aquaeolei VT8]
          Length = 250

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 79  PGHPVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           P  P A    A+G ++  NVN + E     + +R Y   ++ +  +++    T  LL++
Sbjct: 191 PEPPDAAMRVATGFLESSNVNAVEEMISNLQLSRQYEMQVKVMTTANENSEATARLLQN 249


>gi|329929265|ref|ZP_08283018.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
 gi|328936634|gb|EGG33077.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
          Length = 274

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 27/50 (54%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  +G ++  NV++  E ++M    R + AN + I  S +++   ++L R
Sbjct: 225 AIIAGQLEMSNVDLTGEFSEMIVAQRGFQANSRIITTSDEVLQEVVNLKR 274



 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 19/76 (25%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          ++ S +   SG+     ++ +I  NIAN  T G       ++   + F++++        
Sbjct: 1  MLRSMYSGISGMRGFQTKLDVIGNNIANVNTVG-------FKAGRVMFKDILSQTMSGVT 53

Query: 56 ----HGSGGVRVKKIG 67
                SGGV  K+IG
Sbjct: 54 PGTDDPSGGVNAKQIG 69


>gi|197120190|ref|YP_002140617.1| flagellar hook protein FlgE [Geobacter bemidjiensis Bem]
 gi|197089550|gb|ACH40821.1| flagellar hook protein FlgE [Geobacter bemidjiensis Bem]
          Length = 294

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E   M  T R Y AN +TI  S  M    L L+R
Sbjct: 252 EQSTVDLANEFVKMITTQRAYSANSKTITTSDQMTQEVLSLIR 294


>gi|84502376|ref|ZP_01000512.1| flagellar hook protein FlgE, putative [Oceanicola batsensis
           HTCC2597]
 gi|84389188|gb|EAQ01985.1| flagellar hook protein FlgE, putative [Oceanicola batsensis
           HTCC2597]
          Length = 422

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G V+  NV++  E  ++ +  R + +N + I  + +M+  T+ L R
Sbjct: 377 GSVESSNVDIAEELTELIQKQRAFSSNAKIITTADEMLDETVRLKR 422


>gi|218663526|ref|ZP_03519456.1| flagellar hook protein FlgE [Rhizobium etli IE4771]
          Length = 384

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 337 QSGALESSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 384


>gi|24374758|ref|NP_718801.1| flagellar hook protein FlgE [Shewanella oneidensis MR-1]
 gi|24349424|gb|AAN56245.1|AE015762_2 flagellar hook protein FlgE [Shewanella oneidensis MR-1]
          Length = 453

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHG-SGGV 61
          S +IA SG++     +   + NIANA T G        +D Y      F        GGV
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYA--NSIFSNSKTAVGGGV 59

Query: 62 RVKKIGV 68
             ++  
Sbjct: 60 ATSQVAQ 66


>gi|114562343|ref|YP_749856.1| flagellar basal body rod protein FlgF [Shewanella frigidimarina
           NCIMB 400]
 gi|114333636|gb|ABI71018.1| flagellar basal-body rod protein FlgF [Shewanella frigidimarina
           NCIMB 400]
          Length = 247

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   M +  R Y   ++ +K + ++   +  L+R
Sbjct: 198 ESGAVEGSNVNSVHEMVAMIDIQRQYEMQVKMMKNAEEIDRASTSLMR 245


>gi|190574263|ref|YP_001972108.1| flagellar hook protein FlgE [Stenotrophomonas maltophilia K279a]
 gi|190012185|emb|CAQ45808.1| putative flagellar hook protein [Stenotrophomonas maltophilia
           K279a]
          Length = 407

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +G ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 361 QAGSLEASTVDLTEQLVNMITAQRNFQANAQMITTQDQITQTVINI 406



 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 17/71 (23%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------- 59
           +++ SG+   ++ + + + N+AN  TTG       ++     F ++   +G        
Sbjct: 3  FNVSLSGINAANSDLSVTANNVANVNTTG-------FKESRAEFADLFSATGYGLSKNAV 55

Query: 60 --GVRVKKIGV 68
            GVRV  +  
Sbjct: 56 GSGVRVSNVAQ 66


>gi|149375034|ref|ZP_01892807.1| Flagellar hook protein FlgE [Marinobacter algicola DG893]
 gi|149360923|gb|EDM49374.1| Flagellar hook protein FlgE [Marinobacter algicola DG893]
          Length = 618

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  ++    R Y AN +TI+ S  +  T ++L
Sbjct: 576 IEESNVDLSAELVNLIIAQRNYQANAKTIETSDAVTQTVINL 617


>gi|120598232|ref|YP_962806.1| flagellar hook protein FlgE [Shewanella sp. W3-18-1]
 gi|120558325|gb|ABM24252.1| flagellar basal body FlaE domain protein [Shewanella sp. W3-18-1]
          Length = 453

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHG-SGGV 61
          S +IA SG++     +   + NIANA T G        +D Y      F        GGV
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTVGFKESRAEFADVYA--NSIFSNSKTAVGGGV 59

Query: 62 RVKKIGV 68
             ++  
Sbjct: 60 ATSQVAQ 66



 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452


>gi|194365680|ref|YP_002028290.1| flagellar hook protein FlgE [Stenotrophomonas maltophilia R551-3]
 gi|194348484|gb|ACF51607.1| flagellar basal body FlaE domain protein [Stenotrophomonas
           maltophilia R551-3]
          Length = 407

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +G ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 361 QAGSLEASTVDLTEQLVNMITAQRNFQANAQMITTQDQITQTVINI 406



 Score = 38.8 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 17/71 (23%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------- 59
           +++ SG+   ++ + + + N+AN  TTG       ++     F ++   +G        
Sbjct: 3  FNVSLSGINAANSDLSVTANNVANVNTTG-------FKESRAEFADLFSATGYGLSKNAV 55

Query: 60 --GVRVKKIGV 68
            GVRV  +  
Sbjct: 56 GSGVRVSNVAQ 66


>gi|310767290|gb|ADP12240.1| flagellar hook protein FlgE [Erwinia sp. Ejp617]
          Length = 402

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 AGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NI+N+ T G       ++  T++F ++  GS    G +V  + 
Sbjct: 6  AVSGLNAASSNLDVIGNNISNSATAG-------FKSSTVAFADMFAGSKVGLGTKVASVV 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|90579909|ref|ZP_01235717.1| flagellar hook protein [Vibrio angustum S14]
 gi|90438794|gb|EAS63977.1| flagellar hook protein [Vibrio angustum S14]
          Length = 467

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 27/82 (32%), Gaps = 8/82 (9%)

Query: 7  SAHIANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEV-MHGSGGV 61
          S +IA SGL      +   S NIANA T           D Y      F        GGV
Sbjct: 2  SMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEFGDVY--SNSIFSNAKTTTGGGV 59

Query: 62 RVKKIGVDQSTFVEEFDPGHPV 83
          +   +          +   +P+
Sbjct: 60 QTSTVAQQFHEGSSIY-TNNPL 80



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  D+    R + A+ + +  ++ +    L +
Sbjct: 421 KSGTLEQSNIDMTQELVDLITAQRNFQASSRALDVNNQLQQNILQI 466


>gi|83589650|ref|YP_429659.1| hypothetical protein Moth_0798 [Moorella thermoacetica ATCC 39073]
 gi|83572564|gb|ABC19116.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
          Length = 280

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++      M    R Y  N +TI+ + +M +   +L R
Sbjct: 234 SGYLEAANVDLAATMTRMVVAQRAYELNSRTIRVADEMWSLANNLRR 280



 Score = 40.7 bits (95), Expect = 0.076,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 36/105 (34%), Gaps = 18/105 (17%)

Query: 12  NSGLAVQSARMQIISENIANARTTGDTP-----GSDPYR----RKTISFEEVMHGS---- 58
            SG+  Q  ++  ++ +IAN  TTG            YR          +    GS    
Sbjct: 10  ASGMRAQQVQVDSLANDIANVNTTGYKQVRVGFSDLVYRPVMEAGMPVEQPQAPGSTVSL 69

Query: 59  -GGVRVKKIGVD--QSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
             GV+V  I  D  Q   V+  +P +      G      VN   E
Sbjct: 70  GTGVKVASIVKDFSQGALVQTGEPLNLAIQGEGFFAV--VNGAGE 112


>gi|117919772|ref|YP_868964.1| flagellar hook protein FlgE [Shewanella sp. ANA-3]
 gi|117612104|gb|ABK47558.1| GCN5-related N-acetyltransferase [Shewanella sp. ANA-3]
          Length = 453

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHG-SGGV 61
          S +IA SG++     +   + NIANA T G        +D Y      F        GGV
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYA--NSIFSNSKTAVGGGV 59

Query: 62 RVKKIGV 68
             ++  
Sbjct: 60 ATSQVAQ 66


>gi|256833233|ref|YP_003161960.1| hypothetical protein Jden_2019 [Jonesia denitrificans DSM 20603]
 gi|256686764|gb|ACV09657.1| protein of unknown function DUF1078 domain protein [Jonesia
           denitrificans DSM 20603]
          Length = 397

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++    R + AN + I  S +++   ++L R
Sbjct: 355 EMSNVDLSQEFTNLIIAQRGFQANSRVITTSDEVLQELVNLKR 397



 Score = 37.2 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 11/52 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          L +      SG+      + +   NIAN  TTG       Y+     F++ +
Sbjct: 5  LFSGI----SGMRSHQTMLDVTGNNIANVNTTG-------YKASQTQFKDTL 45


>gi|78062976|ref|YP_372884.1| flagellar hook protein FlgE [Burkholderia sp. 383]
 gi|77970861|gb|ABB12240.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 414

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  ++ +  R Y AN QTIK    +  T L++
Sbjct: 375 SNVDLTTELVNLIKAQRDYQANAQTIKTQQTVDQTLLNM 413


>gi|89067517|ref|ZP_01155030.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
          HTCC2516]
 gi|89047086|gb|EAR53140.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
          HTCC2516]
          Length = 433

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 34/61 (55%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +S + + +GL   ++R+  I++NIAN+ T G    +  +    ++  E  + +GGVRV
Sbjct: 3  ISSSLNASVAGLTANASRLATIADNIANSSTFGYKRATTDFHSMVLNTTEGTYSAGGVRV 62

Query: 64 K 64
           
Sbjct: 63 T 63



 Score = 41.1 bits (96), Expect = 0.050,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E  ++ +T R Y +N + I+   +M+  T ++ R
Sbjct: 396 DVAGELTELIQTQRAYSSNAKVIQTVDEMLQETTNIKR 433


>gi|146293690|ref|YP_001184114.1| flagellar hook protein FlgE [Shewanella putrefaciens CN-32]
 gi|145565380|gb|ABP76315.1| flagellar basal body FlaE domain protein [Shewanella putrefaciens
           CN-32]
 gi|319427089|gb|ADV55163.1| flagellar hook-basal body protein [Shewanella putrefaciens 200]
          Length = 453

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHG-SGGV 61
          S +IA SG++     +   + NIANA T G        +D Y      F        GGV
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYA--NSIFSNSKTAVGGGV 59

Query: 62 RVKKIGV 68
             ++  
Sbjct: 60 ATSQVAQ 66


>gi|319898631|ref|YP_004158724.1| flagellar basal-body rod protein flgF [Bartonella clarridgeiae 73]
 gi|319402595|emb|CBI76140.1| Flagellar basal-body rod protein flgF [Bartonella clarridgeiae 73]
          Length = 244

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVN ++E   + E +R +      ++Q  +M + ++ +L
Sbjct: 195 QGYIESSNVNGVIEMTRLIEVSRAFERVESMLRQQEEMRSKSIQVL 240



 Score = 34.1 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 21 RMQIISENIANARTTGDTPGS 41
          RM+ I++N+AN  T G   G 
Sbjct: 18 RMETIAQNMANVNTPGFRAGG 38


>gi|259908812|ref|YP_002649168.1| flagellar hook protein FlgE [Erwinia pyrifoliae Ep1/96]
 gi|224964434|emb|CAX55943.1| Flagellar biosynthesis, hook protein [Erwinia pyrifoliae Ep1/96]
 gi|283478794|emb|CAY74710.1| flgE [Erwinia pyrifoliae DSM 12163]
          Length = 402

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 AGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NI+N+ T G       ++  T++F ++  GS    G +V  + 
Sbjct: 6  AVSGLNAASSNLDVIGNNISNSATAG-------FKSSTVAFADMFAGSKVGLGTKVASVV 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|157362948|ref|YP_001469715.1| flagellar basal-body rod protein FlgB [Thermotoga lettingae TMO]
 gi|157313552|gb|ABV32651.1| flagellar basal-body rod protein FlgB [Thermotoga lettingae TMO]
          Length = 125

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 7/61 (11%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I  + + V   R  I ++NIANA T G       Y+RK + FEE+++ +  +++K   
Sbjct: 6  FQIIKTAMDVAILRQNIFAQNIANAETPG-------YKRKYVVFEELLNQAMSMKMKTTD 58

Query: 68 V 68
           
Sbjct: 59 E 59


>gi|114570496|ref|YP_757176.1| flagellar basal body rod protein [Maricaulis maris MCS10]
 gi|114340958|gb|ABI66238.1| flagellar basal body rod protein [Maricaulis maris MCS10]
          Length = 249

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 7/63 (11%)

Query: 78  DPGH-PVA--NA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD- 130
           DP + P+A  +A    G V+  NV  ++E  DM    R Y +  + ++Q+ D+    ++ 
Sbjct: 186 DPANEPLAMIDATVSQGFVEQSNVQSILELTDMMSVMRSYQSVSKFLEQAEDLSKRAIER 245

Query: 131 LLR 133
           L R
Sbjct: 246 LGR 248


>gi|83589620|ref|YP_429629.1| flagellar basal-body rod protein FlgB [Moorella thermoacetica ATCC
           39073]
 gi|83572534|gb|ABC19086.1| flagellar basal-body rod protein FlgB [Moorella thermoacetica ATCC
           39073]
          Length = 132

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 52/148 (35%), Gaps = 35/148 (23%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           +L  + ++    L   + R + I+ NIAN  T G       ++R  +SFE+ +  + G+ 
Sbjct: 2   FLTPTMYVLEKALDTATLRQRTIAHNIANVNTPG-------FKRYQVSFEDQLSRALGLE 54

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYP---------------NVNVLVETADMRET 107
                      +   +P H     SG+   P               NV++  E  D+   
Sbjct: 55  -------PGLPLYRTNPYHL--PPSGLELAPQVSRDTSTTMRQDGNNVDIDREMVDL--A 103

Query: 108 NRLYMANLQT--IKQSHDMMTTTLDLLR 133
                 N+    +     M+   ++  R
Sbjct: 104 QNSLNFNVAVQQLNTRLAMLRYVINEGR 131


>gi|262364765|gb|ACY61322.1| flagellar hook protein [Yersinia pestis D182038]
          Length = 104

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            SG ++  NV++  E   +    R Y A+ + I  +  MM     +L
Sbjct: 58  ESGALENSNVDITAELVGLMTAQRNYQASTKIISTNDSMMNALFQVL 104


>gi|188592117|ref|YP_001796715.1| flagellar hook protein flge [Cupriavidus taiwanensis LMG 19424]
 gi|170938491|emb|CAP63478.1| FlgE: Flagellar hook protein [Cupriavidus taiwanensis LMG 19424]
          Length = 414

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  +  ++    R Y AN QTIK    +M T ++L
Sbjct: 373 VEASNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLVNL 414



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 10/60 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIGVD 69
          SGL   ++ + +I  NIANA T G       Y++    F +V  G+    GVRV  +   
Sbjct: 8  SGLNAAASNLDVIGNNIANANTVG-------YKQSAAQFADVYAGTKIGLGVRVNSVVQS 60


>gi|258512707|ref|YP_003186141.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479433|gb|ACV59752.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 403

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT-TTLDLLR 133
           G ++  NVNV    A M +    Y AN +  +    M+     D+ R
Sbjct: 353 GALESSNVNVAATMAQMMQALNAYEANQRVAQSVDSMLNVAATDIGR 399


>gi|218290052|ref|ZP_03494219.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218239886|gb|EED07074.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 403

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT-TTLDLLR 133
           G ++  NVNV    A M +    Y AN +  +    M+     D+ R
Sbjct: 353 GALESSNVNVAATMAQMMQALNAYEANQRVAQSVDSMLNVAATDIGR 399


>gi|261409668|ref|YP_003245909.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
 gi|261286131|gb|ACX68102.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
          Length = 275

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 19/45 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG V+  NVN+  E   M E  R Y    + +  S  MM     +
Sbjct: 229 SGFVEQSNVNLTDELTKMMEVQRAYQLTARALSSSDTMMNLANTM 273



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +     R+ +I++N+AN  T G       Y++K  SFE+V+    G
Sbjct: 12 MNALQQRLDVIADNMANVNTAG-------YKKKEASFEDVLTQVQG 50


>gi|37525841|ref|NP_929185.1| flagellar hook protein FlgE [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785270|emb|CAE14211.1| Flagellar hook protein FlgE [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 404

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y ++ QTIK    ++ T + +
Sbjct: 359 SGSLEASNVDMSQELVNMIVAQRNYQSSAQTIKTQDQILQTLVSM 403



 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 10/63 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIANA T G       ++  T++F ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAAGNLDVIGNNIANAATYG-------FKSSTVAFSDIFAGSQVGLGVKV 54

Query: 64 KKI 66
            +
Sbjct: 55 SGV 57


>gi|315127352|ref|YP_004069355.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
 gi|315015866|gb|ADT69204.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
          Length = 247

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NVN + E  DM    R +   ++ +K + ++      L+R
Sbjct: 200 GTLEKSNVNPVHEMVDMISHQRQFELQVKLMKTAEEIDERQEQLMR 245


>gi|303240291|ref|ZP_07326810.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus
           CD2]
 gi|302592201|gb|EFL61930.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus
           CD2]
          Length = 137

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 53/140 (37%), Gaps = 39/140 (27%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L   + R ++I++NIAN  T G       Y+RKT+SFEE +  +       I  + S   
Sbjct: 16  LDATATRNEVIAQNIANVDTPG-------YKRKTVSFEEQLSDA-------ISKNSSFKG 61

Query: 75  EEFDPGH-----PVANA----------------SGIVKYPNVNVLVETADMRETNRLYMA 113
              DP H       A+                  G     NV++  E A M E N  Y  
Sbjct: 62  RRTDPRHIAIGGSSADEVKINVSEDKSSLDMRLDGN----NVDIENEMAQMAENNIRYEV 117

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
            +Q I  S   M + +   R
Sbjct: 118 LIQRISGSFSRMKSVIKEGR 137


>gi|329928721|ref|ZP_08282570.1| putative flagellar basal-body rod protein FlgB [Paenibacillus sp.
           HGF5]
 gi|328937502|gb|EGG33920.1| putative flagellar basal-body rod protein FlgB [Paenibacillus sp.
           HGF5]
          Length = 275

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 19/45 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG V+  NVN+  E   M E  R Y    + +  S  MM     +
Sbjct: 229 SGFVEQSNVNLTDELTKMMEVQRAYQLTARALSSSDTMMNLANTM 273



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +     R+ +I++N+AN  T G       Y++K  SFE+V+    G
Sbjct: 12 MNALQQRLDVIADNMANVNTAG-------YKKKEASFEDVLTQVQG 50


>gi|258511108|ref|YP_003184542.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257477834|gb|ACV58153.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 134

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 30/124 (24%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK-------- 65
            L   + R  + + NIANA T G       Y+R+ ++FE ++  +   +           
Sbjct: 10  ALDASTLRQAVYANNIANAETPG-------YKRQDVAFETLLQNALSGQASGALGEAQIP 62

Query: 66  IGVDQSTF---------VEEF-DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           IG D  ++            + DP   V N++G     NV++  E   + E    Y   +
Sbjct: 63  IGGDAPSYDLNALPDVTPVVYTDPSTTV-NSNGN----NVDITEEMVLLAENQVRYDTLV 117

Query: 116 QTIK 119
           Q I 
Sbjct: 118 QVIS 121


>gi|188587648|ref|YP_001920210.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188497929|gb|ACD51065.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 366

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A+ + I    +++ T   L+R
Sbjct: 320 QGALESSNVDLTEQFTDMITATRAFQASSKMITTGDEILQTITGLMR 366



 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++ S +   SG+     ++ +I  NIAN  TTG       ++  +  F ++++ + 
Sbjct: 1  MLRSMYSGISGMKTNQVKLDVIGNNIANVSTTG-------FKSSSARFSDMLYQNA 49


>gi|333004885|gb|EGK24405.1| flagellar hook protein flgE [Shigella flexneri VA-6]
          Length = 399

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 354 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTRVNL 398



 Score = 40.7 bits (95), Expect = 0.065,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|327254554|gb|EGE66170.1| hypothetical protein ECSTEC7V_0308 [Escherichia coli STEC_7v]
          Length = 400

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           SG ++  NV++  E  ++    R Y AN + I  S  +
Sbjct: 355 SGALESSNVDITSELVNLMTAQRNYQANTKVIATSTQL 392



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IA +GL   + ++  IS NIANA T G       Y+  T  F  +  GS   GV V 
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVG-------YKSMTTQFSAMYAGSQAMGVSVA 54

Query: 65 KIGVD 69
               
Sbjct: 55 GTAQS 59


>gi|251780251|ref|ZP_04823171.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084566|gb|EES50456.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 366

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A+ + I    +++ T   L+R
Sbjct: 320 QGALESSNVDLTEQFTDMITATRAFQASSKMITTGDEILQTITGLMR 366



 Score = 37.2 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++ S +   SG+     ++ +I  NIAN  TTG       ++  +  F ++++ + 
Sbjct: 1  MLRSMYSGISGMKTNQVKLDVIGNNIANVSTTG-------FKSSSARFSDMLYQNA 49


>gi|119899027|ref|YP_934240.1| FlgE protein [Azoarcus sp. BH72]
 gi|119671440|emb|CAL95353.1| FlgE protein [Azoarcus sp. BH72]
          Length = 445

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E   M    R Y AN Q+I+    ++ T ++L
Sbjct: 400 AGQIEESNVDLTQELVSMIVQQRNYQANAQSIRTQDQILQTLVNL 444



 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 6/87 (6%)

Query: 13 SGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          SGL   S  + +IS N+ANA T G    +T  +D Y          +    G +V  +  
Sbjct: 8  SGLNSSSKALDVISNNVANASTVGFKASNTIFADMYASAMTGGTSSLQVGIGSKVAAVTQ 67

Query: 69 D--QSTFVEEFDPGHPVANASGIVKYP 93
             Q       +P     N +G  +  
Sbjct: 68 SFTQGNLTATNNPLDMAINGNGFFRLS 94


>gi|89075496|ref|ZP_01161907.1| putative flagellar basal-body rod protein FlgF [Photobacterium sp.
           SKA34]
 gi|89048768|gb|EAR54339.1| putative flagellar basal-body rod protein FlgF [Photobacterium sp.
           SKA34]
          Length = 249

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G+++  NVN + E   M +  R +   ++ +K + +M   +  L+R
Sbjct: 200 AKGMLEGSNVNAVSEMTSMIDLQRHFEMQVKLMKTAEEMDKASSSLMR 247


>gi|149675698|dbj|BAF64728.1| flagellar hook protein [Shewanella livingstonensis]
          Length = 459

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 418 EQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLNQTILQI 458



 Score = 41.5 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 6/58 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGG 60
          S +IA SG+A     +   + NIAN  T G        +D Y      F       GG
Sbjct: 2  SLNIALSGIAAAQKDLNTTANNIANVNTIGFKESRAEFADVYA--DSIFSNSKTAVGG 57


>gi|317133467|ref|YP_004092781.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
 gi|315471446|gb|ADU28050.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
          Length = 239

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 18/44 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G V+  NVN + +   + E +R + +  Q      D +   + 
Sbjct: 190 QGYVEKSNVNTVTDMTGLMEASRAFQSCQQAYNTGTDTLDKLVT 233



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 7/68 (10%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-------KTISFEEVMHGSGGVRV 63
          A SG+  QS R+ ++  N+ NA + G    +   R        +T     V   + GV V
Sbjct: 8  AASGMIAQSDRINVMGNNLDNADSQGFKSDTATLRSFDEELALRTTDAVPVGTLNAGVHV 67

Query: 64 KKIGVDQS 71
            +  D S
Sbjct: 68 SGVETDLS 75


>gi|242238969|ref|YP_002987150.1| flagellar hook protein FlgE [Dickeya dadantii Ech703]
 gi|242131026|gb|ACS85328.1| flagellar basal body FlaE domain protein [Dickeya dadantii Ech703]
          Length = 399

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 354 SGALESSNVDISQELVNMIVAQRNYQSNAQTIKTQDAILNTLVNL 398



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 10/61 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S+ + +I  NIAN+ TTG       ++  ++SF ++   S    GV+V  + 
Sbjct: 6  AVSGLNAASSNLDVIGNNIANSETTG-------FKSASVSFADIYADSAVGLGVKVASVT 58

Query: 68 V 68
           
Sbjct: 59 Q 59


>gi|311070150|ref|YP_003975073.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
 gi|310870667|gb|ADP34142.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
          Length = 274

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  +  D+  + R Y  N +TI     M+
Sbjct: 228 QQGALEMSNVDISKQMTDLISSQRSYQLNSRTITMGDQML 267


>gi|83814111|ref|YP_446742.1| flagellar basal-body rod protein [Salinibacter ruber DSM 13855]
 gi|83755505|gb|ABC43618.1| flagellar basal-body rod protein [Salinibacter ruber DSM 13855]
          Length = 241

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G V+  NV+ + E  +M E  R + A  +TI+ +  ++   
Sbjct: 193 QGKVETSNVDPVTELTNMIEIQRQFEAQQKTIQTTDGVLGRA 234


>gi|114562342|ref|YP_749855.1| flagellar hook protein FlgE [Shewanella frigidimarina NCIMB 400]
 gi|114333635|gb|ABI71017.1| flagellar basal body FlaE domain protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 459

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 418 EQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLNQTILQI 458



 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +IA SG+A     +   + NIAN  T G
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNTIG 31


>gi|308050024|ref|YP_003913590.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799]
 gi|307632214|gb|ADN76516.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799]
          Length = 407

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +G ++  NV++  E  ++    R Y +N + I     +    
Sbjct: 362 AGAIEGSNVDLTGELVNLMTAQRNYQSNAKVISTQDKLTQAL 403



 Score = 41.5 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 15/30 (50%), Positives = 17/30 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +IA SGL   S  +  IS NIAN  T G
Sbjct: 2  SFNIALSGLRSTSQDLNTISNNIANVSTPG 31


>gi|291526374|emb|CBK91961.1| flagellar hook-associated protein FlgK [Eubacterium rectale DSM
          17629]
 gi|291526819|emb|CBK92405.1| flagellar hook-associated protein FlgK [Eubacterium rectale
          M104/1]
          Length = 617

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
          M       HI +S L+         + NIAN +TTG T      + K        +GS  
Sbjct: 1  MASTFFGLHIGSSALSSFQVATNTTANNIANVKTTGYTRQEATLQAKDAINVTARYGSVG 60

Query: 59 GGVRVKKI 66
           GV V  I
Sbjct: 61 TGVTVTSI 68


>gi|149927798|ref|ZP_01916049.1| flagellar hook protein E [Limnobacter sp. MED105]
 gi|149823420|gb|EDM82651.1| flagellar hook protein E [Limnobacter sp. MED105]
          Length = 437

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  N+++  E   M    R+Y AN QTIK    +   T+  LR
Sbjct: 391 QSGALEESNIDLTAELVAMISAQRVYQANSQTIKTQDSIFQ-TITNLR 437


>gi|126668559|ref|ZP_01739513.1| Flagellar basal body rod protein [Marinobacter sp. ELB17]
 gi|126626964|gb|EAZ97607.1| Flagellar basal body rod protein [Marinobacter sp. ELB17]
          Length = 250

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 83  VANAS---GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            ANA    G ++  NVN + E     + +R Y   ++ +  + +       LL++
Sbjct: 195 DANARVSGGFLESSNVNAVAEMISNLQLSRQYEMQVKVMSTAKENSEAAARLLQN 249


>gi|295097203|emb|CBK86293.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 404

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 25/43 (58%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +++  NV++  E  +M    R Y +N QTIK   +++ T ++L
Sbjct: 361 MLEQSNVDLGQEMVNMIVYQRNYQSNSQTIKTQSELLQTLVNL 403



 Score = 40.7 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 7/58 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          SGL   +  + ++  NIAN++T G       ++  +++F ++  G+ G+ V+  GV Q
Sbjct: 8  SGLNAAAKALDVVGNNIANSQTAG-------FKAGSVAFADIFAGTTGLGVQVAGVTQ 58


>gi|218886899|ref|YP_002436220.1| hypothetical protein DvMF_1808 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757853|gb|ACL08752.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 501

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  +M    R +  N ++I  +  M+   L+L R
Sbjct: 458 EQSNVSMEREFVNMIIYQRGFQTNSKSIMTADSMIQKALELKR 500



 Score = 33.7 bits (77), Expect = 8.5,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +G+   +  MQ +S N+AN  T G       ++++   FE++M    G
Sbjct: 9  ATGMKTLAQGMQAVSNNLANVNTVG-------FKQQQALFEDLMSQYAG 50


>gi|254461663|ref|ZP_05075079.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
          HTCC2083]
 gi|206678252|gb|EDZ42739.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
          HTCC2083]
          Length = 262

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 12/66 (18%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           + H+A +GL  Q  RMQ+I+ N++N  T G       ++   ++FE +++     +VK+
Sbjct: 4  NAMHVAKTGLNAQQTRMQVIANNLSNLNTVG-------FKSDRVNFESLLY-----QVKR 51

Query: 66 IGVDQS 71
           G DQ+
Sbjct: 52 GGGDQT 57



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 23/40 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ +  +M ET R Y  + ++I  S +MM 
Sbjct: 217 QGSLESSNVNVVQQLVEMIETQRAYEVSSKSITASDEMMR 256


>gi|283780137|ref|YP_003370892.1| flagellar basal-body rod protein FlgG [Pirellula staleyi DSM 6068]
 gi|283438590|gb|ADB17032.1| flagellar basal-body rod protein FlgG [Pirellula staleyi DSM 6068]
          Length = 266

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G+++  NV  + E  D+  T R +  N Q I+    ++ 
Sbjct: 220 QGMLEASNVEPVQELIDLITTQRSFELNSQAIQAGDQILQ 259



 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A +G+     ++ +I+ N+AN  TTG       ++R   +FE++ +  
Sbjct: 9  AATGMESLQTKLDVIANNLANVNTTG-------FKRGRANFEDLFYRQ 49


>gi|197335019|ref|YP_002156699.1| flagellar basal-body rod protein FlgF [Vibrio fischeri MJ11]
 gi|197316509|gb|ACH65956.1| flagellar basal-body rod protein FlgF [Vibrio fischeri MJ11]
          Length = 249

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 83  VANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            A+A+     G ++  NVN + E  ++ +  R +   ++ +  + +M   +  LLR
Sbjct: 192 DADANITLLSGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEMDKASDSLLR 247


>gi|89075495|ref|ZP_01161906.1| flagellar hook protein [Photobacterium sp. SKA34]
 gi|89048767|gb|EAR54338.1| flagellar hook protein [Photobacterium sp. SKA34]
          Length = 467

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 27/82 (32%), Gaps = 8/82 (9%)

Query: 7  SAHIANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEV-MHGSGGV 61
          S +IA SGL      +   S NIANA T           D Y      F        GGV
Sbjct: 2  SMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEFGDVY--SNSIFSNAKTTTGGGV 59

Query: 62 RVKKIGVDQSTFVEEFDPGHPV 83
          +   +          +   +P+
Sbjct: 60 QTSTVAQQFHEGSSIY-TNNPL 80



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  D+    R + A+ + +  ++ +    L +
Sbjct: 421 KSGTLEQSNIDMTQELVDLITAQRNFQASSRALDVNNQLQQNILQI 466


>gi|85712254|ref|ZP_01043305.1| flagellar hook protein [Idiomarina baltica OS145]
 gi|85693881|gb|EAQ31828.1| flagellar hook protein [Idiomarina baltica OS145]
          Length = 466

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  D+    R + AN ++++ ++ +    L +
Sbjct: 427 SNVDLTKELVDLISAQRNFQANSRSLEINNSLQQNILQI 465



 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +IA SG++     + + + N+AN RTTG
Sbjct: 2  SFNIALSGISSAQKDLDVTANNVANVRTTG 31


>gi|153001472|ref|YP_001367153.1| flagellar hook protein FlgE [Shewanella baltica OS185]
 gi|160876203|ref|YP_001555519.1| flagellar hook protein FlgE [Shewanella baltica OS195]
 gi|217972598|ref|YP_002357349.1| flagellar hook protein FlgE [Shewanella baltica OS223]
 gi|151366090|gb|ABS09090.1| flagellar basal body FlaE domain protein [Shewanella baltica OS185]
 gi|160861725|gb|ABX50259.1| flagellar basal body FlaE domain protein [Shewanella baltica OS195]
 gi|217497733|gb|ACK45926.1| flagellar basal body FlaE domain protein [Shewanella baltica OS223]
 gi|315268393|gb|ADT95246.1| fagellar hook-basal body protein [Shewanella baltica OS678]
          Length = 453

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHG-SGGV 61
          S +IA SG++     +   + NIANA T G        +D Y      F        GGV
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYA--NSIFSNSKTAVGGGV 59

Query: 62 RVKKIGV 68
             ++  
Sbjct: 60 ATSQVAQ 66


>gi|90579910|ref|ZP_01235718.1| putative flagellar basal-body rod protein FlgF [Vibrio angustum
           S14]
 gi|90438795|gb|EAS63978.1| putative flagellar basal-body rod protein FlgF [Vibrio angustum
           S14]
          Length = 249

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G+++  NVN + E   M +  R +   ++ +K + +M   +  L+R
Sbjct: 200 AKGMLEGSNVNAVSEMTSMIDLQRHFEMQVKLMKTAEEMDKASSSLMR 247


>gi|304438415|ref|ZP_07398355.1| flagellar hook protein FlgE [Selenomonas sp. oral taxon 149 str.
          67H29BP]
 gi|304368498|gb|EFM22183.1| flagellar hook protein FlgE [Selenomonas sp. oral taxon 149 str.
          67H29BP]
          Length = 678

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 18/79 (22%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          +I S   A SGL     RM ++  NIAN  TTG       ++   ++F +++  +     
Sbjct: 1  MIRSMFSAVSGLKGHQTRMDVVGNNIANVNTTG-------FKASRVTFADMISQNLSGAS 53

Query: 59 ------GGVRVKKIGVDQS 71
                GGV  K+IG+  S
Sbjct: 54 SPTGTIGGVNPKQIGLGMS 72



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 25/43 (58%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  + +DM  T R + +N + I  S +M+ T +++ R
Sbjct: 636 EMSNVDLADQFSDMIITQRGFQSNSKMITVSDEMLETLINMKR 678


>gi|238922534|ref|YP_002936047.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC
          33656]
 gi|238874206|gb|ACR73913.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC
          33656]
          Length = 617

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
          M       HI +S L+         + NIAN +TTG T      + K        +GS  
Sbjct: 1  MASTFFGLHIGSSALSSFQVATNTTANNIANVKTTGYTRQEATLQAKDAINVTARYGSVG 60

Query: 59 GGVRVKKI 66
           GV V  I
Sbjct: 61 TGVTVTSI 68


>gi|187778771|ref|ZP_02995244.1| hypothetical protein CLOSPO_02366 [Clostridium sporogenes ATCC
           15579]
 gi|187772396|gb|EDU36198.1| hypothetical protein CLOSPO_02366 [Clostridium sporogenes ATCC
           15579]
          Length = 255

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 80  GHPVANASGIVK-----YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +P  N +GIV+       NVNV  E  +M  T R +  N + ++   + +  T++
Sbjct: 195 NNPQ-NINGIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQKMVQAIDETLGKTVN 249


>gi|254973936|ref|ZP_05270408.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-66c26]
 gi|255091322|ref|ZP_05320800.1| flagellar basal body rod protein FlgG [Clostridium difficile CIP
           107932]
 gi|255312980|ref|ZP_05354563.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-76w55]
 gi|255515739|ref|ZP_05383415.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-97b34]
 gi|255648833|ref|ZP_05395735.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-37x79]
 gi|260682050|ref|YP_003213335.1| flagellar basal body rod protein FlgG [Clostridium difficile CD196]
 gi|260685648|ref|YP_003216781.1| flagellar basal body rod protein FlgG [Clostridium difficile
           R20291]
 gi|260208213|emb|CBA60571.1| putative flagellar basal-body rod protein [Clostridium difficile
           CD196]
 gi|260211664|emb|CBE01933.1| putative flagellar basal-body rod protein [Clostridium difficile
           R20291]
          Length = 253

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G  +  NV++  E  D+  T R +  N + IK + +M     +L
Sbjct: 206 QGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKTADEMWQIANNL 250



 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +    + + + L+   +++ IIS NIAN+ +TG
Sbjct: 1  MYTMFYTSKTALSANQSKLDIISNNIANSDSTG 33


>gi|11136619|gb|AAG31286.1|AF317649_1 flagellar hook-associated protein 1 [Rhodobacter sphaeroides]
          Length = 1363

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 17/74 (22%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------ 58
          ++   IA SGL    + + + +ENIAN  T G       Y R+     +V  G       
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEG-------YVRREAVLAQVPGGQISPTSA 53

Query: 59 ----GGVRVKKIGV 68
               GVRV+ +  
Sbjct: 54 ATSGQGVRVEDVRR 67


>gi|77463646|ref|YP_353150.1| FlgK flagellar hook-associated protein 1 [Rhodobacter sphaeroides
          2.4.1]
 gi|77388064|gb|ABA79249.1| FlgK flagellar hook-associated protein 1 [Rhodobacter sphaeroides
          2.4.1]
          Length = 1363

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 17/74 (22%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------ 58
          ++   IA SGL    + + + +ENIAN  T G       Y R+     +V  G       
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEG-------YVRREAVLAQVPGGQISPTSA 53

Query: 59 ----GGVRVKKIGV 68
               GVRV+ +  
Sbjct: 54 ATSGQGVRVEDVRR 67


>gi|126462478|ref|YP_001043592.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17029]
 gi|126104142|gb|ABN76820.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17029]
          Length = 1363

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 17/74 (22%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------ 58
          ++   IA SGL    + + + +ENIAN  T G       Y R+     +V  G       
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEG-------YVRREAVLAQVPGGQISPTSA 53

Query: 59 ----GGVRVKKIGV 68
               GVRV+ +  
Sbjct: 54 ATSGQGVRVEDVRR 67


>gi|332558502|ref|ZP_08412824.1| FlgK (HAP1) [Rhodobacter sphaeroides WS8N]
 gi|332276214|gb|EGJ21529.1| FlgK (HAP1) [Rhodobacter sphaeroides WS8N]
          Length = 1363

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 17/74 (22%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------ 58
          ++   IA SGL    + + + +ENIAN  T G       Y R+     +V  G       
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEG-------YVRREAVLAQVPGGQISPTSA 53

Query: 59 ----GGVRVKKIGV 68
               GVRV+ +  
Sbjct: 54 ATSGQGVRVEDVRR 67


>gi|308273550|emb|CBX30152.1| hypothetical protein N47_D29610 [uncultured Desulfobacterium sp.]
          Length = 584

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L     IANS L+ Q   ++I S NIAN  T G       Y R+   +E  + GS  
Sbjct: 1  MSSLGLVGDIANSALSAQRYGIEITSHNIANVNTNG-------YTRQNPIYEAKLPGSYS 53

Query: 61 VRVKKIGVDQSTFVEEFDP 79
            +   GVD ST     D 
Sbjct: 54 NLLLGRGVDISTVRRISDQ 72


>gi|226939368|ref|YP_002794441.1| FlgK [Laribacter hongkongensis HLHK9]
 gi|226714294|gb|ACO73432.1| FlgK [Laribacter hongkongensis HLHK9]
          Length = 610

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 14/69 (20%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          ++  +I  +GL    A +   S+N++N  T G       Y RK ++   + +G G     
Sbjct: 1  MSLLNIGVTGLNAARAALTTTSQNVSNVNTAG-------YHRKAVNQSALYYGPGQFGNT 53

Query: 60 --GVRVKKI 66
            GVRV  I
Sbjct: 54 GNGVRVDDI 62


>gi|254973909|ref|ZP_05270381.1| flagellar basal-body rod protein [Clostridium difficile QCD-66c26]
 gi|255091295|ref|ZP_05320773.1| flagellar basal-body rod protein [Clostridium difficile CIP 107932]
 gi|255312953|ref|ZP_05354536.1| flagellar basal-body rod protein [Clostridium difficile QCD-76w55]
 gi|255515712|ref|ZP_05383388.1| flagellar basal-body rod protein [Clostridium difficile QCD-97b34]
 gi|255648806|ref|ZP_05395708.1| flagellar basal-body rod protein [Clostridium difficile QCD-37x79]
 gi|260682025|ref|YP_003213310.1| flagellar basal-body rod protein [Clostridium difficile CD196]
 gi|260685623|ref|YP_003216756.1| flagellar basal-body rod protein [Clostridium difficile R20291]
 gi|306518921|ref|ZP_07405268.1| flagellar basal-body rod protein [Clostridium difficile QCD-32g58]
 gi|260208188|emb|CBA60522.1| flagellar basal-body rod protein [Clostridium difficile CD196]
 gi|260211639|emb|CBE01890.1| flagellar basal-body rod protein [Clostridium difficile R20291]
          Length = 105

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 25/126 (19%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +  I   GL   + R Q I+ NIAN  T G       Y+R  ++FEE ++ +    + 
Sbjct: 1   MNTYDIIKMGLDATNLRSQTIANNIANINTEG-------YKRHYVTFEETLNDA----MP 49

Query: 65  KIGVDQSTFVEEFDPGHPVANASGI-VKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           KI                  N+ G+ V   NV++  E  +       Y A +        
Sbjct: 50  KIEEKTD-------------NSKGLRVDGNNVDIEEEKVNQAMATLQYNALISFANGKIA 96

Query: 124 MMTTTL 129
           M  + +
Sbjct: 97  MTKSII 102


>gi|221639489|ref|YP_002525751.1| Flagellar hook-associated protein 1 [Rhodobacter sphaeroides
          KD131]
 gi|221160270|gb|ACM01250.1| Flagellar hook-associated protein 1 [Rhodobacter sphaeroides
          KD131]
          Length = 1363

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 17/74 (22%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------ 58
          ++   IA SGL    + + + +ENIAN  T G       Y R+     +V  G       
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEG-------YVRREAVLAQVPGGQISPTSA 53

Query: 59 ----GGVRVKKIGV 68
               GVRV+ +  
Sbjct: 54 ATSGQGVRVEDVRR 67


>gi|329928728|ref|ZP_08282577.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
 gi|328937509|gb|EGG33927.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
          Length = 296

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 11/71 (15%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L+   + A SG+  Q  R   +++NIAN  TTG       Y+        V      
Sbjct: 1  MPSLLRGLYTAASGMMTQEQRHNTVTQNIANVNTTG-------YKAT----NSVQRSFPE 49

Query: 61 VRVKKIGVDQS 71
          V V  IG ++S
Sbjct: 50 VLVSMIGGNES 60



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NV+      ++    R Y  N + ++     +   + ++ R
Sbjct: 248 QGFIEGSNVDPTQSMVELTAALRAYETNQKIVQYYDRTLEKAVNEIGR 295


>gi|116694219|ref|YP_728430.1| flagellar hook protein FlgE [Ralstonia eutropha H16]
 gi|113528718|emb|CAJ95065.1| flagellar hook protein [Ralstonia eutropha H16]
          Length = 408

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  +  ++    R Y AN QTIK    +M T ++L
Sbjct: 367 VEASNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLVNL 408



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 10/60 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIGVD 69
          SGL   ++ + +I  NIANA T G       Y++    F +V  G+    GVRV  +   
Sbjct: 8  SGLNAAASNLDVIGNNIANANTVG-------YKQSAAQFADVYAGTKIGLGVRVNSVVQS 60


>gi|94495410|ref|ZP_01301990.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
 gi|94424798|gb|EAT09819.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
          Length = 247

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 79  PGHPVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P  P+A   SG ++  NVN      DM E +R +   ++ I  +  +      L+R
Sbjct: 189 PSDPLATVTSGSLEGSNVNSTQALIDMIEASRAWETQVKMIDTAKQLDDGGASLMR 244


>gi|77918787|ref|YP_356602.1| flagellar biosynthesis, hook protein [Pelobacter carbinolicus DSM
           2380]
 gi|77544870|gb|ABA88432.1| flagellar biosynthesis, hook protein [Pelobacter carbinolicus DSM
           2380]
          Length = 413

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E   M  T R + AN + I  + +M++  ++L R
Sbjct: 371 EQSTVDLAAEFVKMITTQRGFQANSKVITTTDEMLSELINLKR 413


>gi|28897554|ref|NP_797159.1| flagellar basal body rod protein FlgF [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153839688|ref|ZP_01992355.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ3810]
 gi|260364612|ref|ZP_05777214.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           K5030]
 gi|260878283|ref|ZP_05890638.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AN-5034]
 gi|260898113|ref|ZP_05906609.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           Peru-466]
 gi|260901955|ref|ZP_05910350.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ4037]
 gi|5361009|gb|AAD42916.1|U12817_10 polar flagellar FlgF homolog [Vibrio parahaemolyticus]
 gi|28805766|dbj|BAC59043.1| polar flagellar FlgF [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746798|gb|EDM57786.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ3810]
 gi|308086109|gb|EFO35804.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           Peru-466]
 gi|308090198|gb|EFO39893.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AN-5034]
 gi|308106789|gb|EFO44329.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ4037]
 gi|308115108|gb|EFO52648.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           K5030]
 gi|328473452|gb|EGF44300.1| flagellar basal body rod protein FlgF [Vibrio parahaemolyticus
           10329]
          Length = 249

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 30/62 (48%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           T  + ++    ++  +G ++  NVN + E   + +  R +   ++ +  + +M  ++  L
Sbjct: 186 TPNQPYEADGTISIQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEEMDKSSDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|332298237|ref|YP_004440159.1| flagellar hook-basal body protein [Treponema brennaborense DSM
           12168]
 gi|332181340|gb|AEE17028.1| flagellar hook-basal body protein [Treponema brennaborense DSM
           12168]
          Length = 463

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 28/47 (59%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  +  DM  T R + A+ +TI+ +  ++ T ++L R
Sbjct: 417 AGSLEMSNVDLTEQFTDMIVTQRGFQASSKTIQTADTLLDTVMNLKR 463



 Score = 40.3 bits (94), Expect = 0.090,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          ++ S +   SG+     R+ +I  N+AN  TTG       ++R  ++F+++
Sbjct: 1  MMRSLYSGVSGMQNHQTRLDVIGNNVANVNTTG-------FKRGRVNFQDM 44


>gi|327478809|gb|AEA82119.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
           stutzeri DSM 4166]
          Length = 396

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           ASG ++  NV++  +   + E  R Y AN Q I  + ++  
Sbjct: 350 ASGALESSNVDLTQQLVGLMEGQRNYQANTQVISTNKELTQ 390



 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S +IA +GL+  + ++  I  NIAN+ T G       ++    +F  +   +  + V+ I
Sbjct: 2  SFNIALTGLSAVNEQLNTIGNNIANSGTVG-------FKSSRTNFGSLYAETQAMGVEVI 54

Query: 67 GVDQS 71
          G  QS
Sbjct: 55 GTTQS 59


>gi|317121026|ref|YP_004101029.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM
           12885]
 gi|315591006|gb|ADU50302.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM
           12885]
          Length = 289

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G+++  NV++ VE   +    R Y  N + +    +MM
Sbjct: 243 QGMLEQANVDLAVEMTRLLAAQRAYQLNARAVLTGDEMM 281



 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 17/58 (29%), Gaps = 5/58 (8%)

Query: 23 QIISENIANART-----TGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
           + + N+AN  T     +        Y    +        +GGV+        +T   
Sbjct: 21 DVTANNLANVNTPGFKASRADFADLVYAALAVPASPATAAAGGVQAGHGVRLAATPRS 78


>gi|317051681|ref|YP_004112797.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5]
 gi|316946765|gb|ADU66241.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5]
          Length = 1341

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 91   KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  NV++ +E   M    R + AN + I  S  M+   L++ R
Sbjct: 1299 EMSNVDLSMEFTQMIIVERGFQANSRIISTSDSMIQEVLNMKR 1341


>gi|59712480|ref|YP_205256.1| flagellar basal body rod protein FlgF [Vibrio fischeri ES114]
 gi|24459278|gb|AAL86631.1| FlgF [Vibrio fischeri ES114]
 gi|59480581|gb|AAW86368.1| flagellar proximal rod protein FlgF [Vibrio fischeri ES114]
          Length = 249

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 83  VANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            A+A+     G ++  NVN + E  ++ +  R +   ++ +  + +M   +  LLR
Sbjct: 192 DADANITLLSGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEMDKASDSLLR 247


>gi|30248322|ref|NP_840392.1| flagellar hook protein FlgE [Nitrosomonas europaea ATCC 19718]
 gi|30138208|emb|CAD84216.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 410

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 24/42 (57%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E   +  T R+Y AN +TI+    +M T +++
Sbjct: 369 VEESNVDLTTELVTLIMTQRVYQANAKTIETQDAVMQTIMNI 410



 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVK-KIGVDQ 70
          SGL   SA++ +   NIANA T G       +++    F +V   + GG R +  IG   
Sbjct: 8  SGLKAASAKLDVTGNNIANANTVG-------FKQSQAQFADVYANALGGGRNQIGIGTQL 60

Query: 71 STFVEEFDPGHP 82
          +   +EF+ G+ 
Sbjct: 61 AAVAQEFNQGNV 72


>gi|121997319|ref|YP_001002106.1| flagellar basal body FlaE domain-containing protein [Halorhodospira
           halophila SL1]
 gi|121588724|gb|ABM61304.1| flagellar basal body FlaE domain protein [Halorhodospira halophila
           SL1]
          Length = 418

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +G ++  NV V  +  +M    R + AN Q +     +    L++
Sbjct: 372 ENGALEQSNVEVSDQLVNMITAQRNFSANAQMVSTQDQVTQEILNI 417



 Score = 38.4 bits (89), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I+ +G+   S  ++  S N+ANA TTG
Sbjct: 2  SFNISLTGINSASKDLETTSNNLANAGTTG 31


>gi|307131609|ref|YP_003883625.1| flagellar hook protein flgE [Dickeya dadantii 3937]
 gi|306529138|gb|ADM99068.1| Flagellar hook protein flgE [Dickeya dadantii 3937]
          Length = 399

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 360 SNVDMSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 398



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   S  + +I  NIAN+ T G       ++   ISF ++  GS    G RV
Sbjct: 2  SFSQAVSGLNAASNNLDVIGNNIANSATVG-------FKASNISFADMYAGSNVGLGTRV 54

Query: 64 KKIGVD 69
            +  D
Sbjct: 55 ASVLQD 60


>gi|255022066|ref|ZP_05294072.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756]
 gi|254968552|gb|EET26108.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756]
          Length = 416

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG V+  NV++  +  DM    + Y AN  TIK       + L L
Sbjct: 371 QSGAVESSNVSLSSQLVDMIVAQQAYQANTSTIKTEQQDTQSLLQL 416



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTG 36
          + A SGL      +  I  NIAN  T G
Sbjct: 4  NTAISGLDAAQTDLNTIGNNIANVNTVG 31


>gi|153951334|ref|YP_001397315.1| flagellar hook protein [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938780|gb|ABS43521.1| flagellar hook protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 545

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 500 GFLEQSNVDLSTELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|312880336|ref|ZP_07740136.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260]
 gi|310783627|gb|EFQ24025.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260]
          Length = 264

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NVNV+ E + M E NR Y    +T+    ++ +  
Sbjct: 216 GFLERSNVNVVEEMSRMIEANRAYEVAAKTVTIQDELTSRL 256



 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 10/55 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---FEEVM 55
          +    +   S + VQ   + ++  N+AN  T+G       +R +      F EV+
Sbjct: 1  MFRGIYSGTSAMLVQEKMLDVVGNNLANVDTSG-------FRARIAVNKSFPEVL 48


>gi|304438499|ref|ZP_07398439.1| flagellar basal body and hook protein [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368582|gb|EFM22267.1| flagellar basal body and hook protein [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 711

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  + +DM  T R + +N + I  + +M+ T + + R
Sbjct: 669 EMSNVDLADQFSDMIVTQRGFQSNSKIITVADEMLETLISMKR 711



 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 11/59 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M  + +      SGL     RM ++  NIAN  T G       Y+   ++F + ++ + 
Sbjct: 2  MRSMFSGV----SGLKGHQTRMDVVGHNIANVNTVG-------YKASRVTFADTLYQTS 49


>gi|229149945|ref|ZP_04278173.1| Flagellar basal-body rod protein [Bacillus cereus m1550]
 gi|228633626|gb|EEK90227.1| Flagellar basal-body rod protein [Bacillus cereus m1550]
          Length = 147

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 32  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 84

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 85  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 140

Query: 125 MTTT 128
               
Sbjct: 141 NQAA 144


>gi|94987182|ref|YP_595115.1| flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731431|emb|CAJ54794.1| Flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 264

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NVNV+ E   M E NR + A  + ++ S  +    
Sbjct: 214 QGFLESSNVNVVEEMVKMIEVNRQFDAYQKVMQTSDSLDREA 255



 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE 52
           L+ +  RM  I+ N+AN  T G       ++   I F 
Sbjct: 12 ALSAE-HRMNFIANNLANVNTAGYKQDKLAFKDTMIQFA 49


>gi|262276416|ref|ZP_06054225.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
           101886]
 gi|262220224|gb|EEY71540.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
           101886]
          Length = 249

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 9/67 (13%)

Query: 76  EFDPGHP----VANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            F P +P     A+A     +G ++  NVN + E   + +  R +   ++ +K + +M  
Sbjct: 181 VFKPVNPGTIFEADAGVSLLTGALEGSNVNPINEMTGLIDLQRHFEMQVKLMKTAEEMDQ 240

Query: 127 TTLDLLR 133
            +  LLR
Sbjct: 241 ASNSLLR 247


>gi|254418692|ref|ZP_05032416.1| flagellar hook-associated protein FlgK [Brevundimonas sp. BAL3]
 gi|196184869|gb|EDX79845.1| flagellar hook-associated protein FlgK [Brevundimonas sp. BAL3]
          Length = 705

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 4  LIASAHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          L +  +IA SGL   Q+  +++ S+NIAN  T G       Y RKT+     +    G  
Sbjct: 3  LTSIMNIATSGLQTAQAQ-LRVTSDNIANVHTPG-------YVRKTVDQTAAVTQGYGAG 54

Query: 63 VK 64
          V 
Sbjct: 55 VD 56



 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 23/105 (21%)

Query: 46  RKTISFEEVMHGSGGVRV---------KKIGVDQSTFVEEFDPGHPV--------ANASG 88
           +K ++F      SGG +            IG   S      +    +        A+A G
Sbjct: 607 KKNVNFASAGGNSGGTKTLSSYAADFAGDIGGKASAAKTRSETATALSQEADSRRASAEG 666

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 VN+  E  +M    + Y A+ + I+ S DM  T + +L+
Sbjct: 667 ------VNMDEELVNMTTFQQAYNASARLIQASKDMYDTLIGMLK 705


>gi|37679148|ref|NP_933757.1| flagellar basal body rod protein FlgF [Vibrio vulnificus YJ016]
 gi|320157108|ref|YP_004189487.1| flagellar basal-body rod protein FlgF [Vibrio vulnificus MO6-24/O]
 gi|37197890|dbj|BAC93728.1| flagellar basal body rod protein FlgF [Vibrio vulnificus YJ016]
 gi|319932420|gb|ADV87284.1| flagellar basal-body rod protein FlgF [Vibrio vulnificus MO6-24/O]
          Length = 249

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 78  DPGHPV-ANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +P  P  A+ +     G ++  NVN + E   + +  R +   ++ +  + +M  ++  L
Sbjct: 186 EPNQPYEADPTVQIMTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEEMDKSSDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|255099439|ref|ZP_05328416.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-63q42]
          Length = 253

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G  +  NV++  E  D+  T R +  N + IK + +M     +L
Sbjct: 206 QGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKTADEMWQIANNL 250



 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +    + + + L+   +++ IIS NIAN+ +TG
Sbjct: 1  MYTMFYTSKTALSANQSKLDIISNNIANSDSTG 33


>gi|83859391|ref|ZP_00952912.1| flagellar hook protein [Oceanicaulis alexandrii HTCC2633]
 gi|83852838|gb|EAP90691.1| flagellar hook protein [Oceanicaulis alexandrii HTCC2633]
          Length = 465

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 48  TISFEEVMHGSGGVRVKK----IGVDQSTFVEEFDPGHPVANASGI-----VKYPNVNVL 98
            +    V + +G   V      I  D   F        P + ASG      V+  NV++ 
Sbjct: 375 QLPVATVFNPNGLASVGGASFQITEDSGAFTL----NAPGSGASGTIAAKTVENSNVDIA 430

Query: 99  VETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            E +++  T R Y A+ + I  + +M+   + + R
Sbjct: 431 TEFSNLIITQRAYSASSRIITTADEMLAEAIQMKR 465



 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 7/55 (12%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++     SGL   S+ +  IS+NIAN  T G       Y+R    F       GG
Sbjct: 5  SAMAAGASGLIANSSALAAISDNIANVNTVG-------YKRVDTIFTPNYKIGGG 52


>gi|325918874|ref|ZP_08180951.1| flagellar basal-body rod protein FlgB [Xanthomonas vesicatoria
          ATCC 35937]
 gi|325534911|gb|EGD06830.1| flagellar basal-body rod protein FlgB [Xanthomonas vesicatoria
          ATCC 35937]
          Length = 133

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 7/61 (11%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
              +   +    L+++  RM++I+ N++N  T G       Y+ K ++FE  +  + G+
Sbjct: 3  SPFSSFLGVHGDALSLREQRMKLIASNLSNVDTPG-------YKAKDLNFEAALKSAQGM 55

Query: 62 R 62
          +
Sbjct: 56 Q 56


>gi|283955493|ref|ZP_06372988.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283792954|gb|EFC31728.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 545

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 27/46 (58%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++ VE +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 500 GFLEQSNVDLSVELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|317130723|ref|YP_004097005.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315475671|gb|ADU32274.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 274

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
             G ++  NV+      +M    R + AN + ++     +     D+ R
Sbjct: 224 QQGFLERANVDAAQTMTEMMSALRTFEANQRVLQAYDRSLERAVNDIGR 272


>gi|114706758|ref|ZP_01439658.1| flagellar basal body rod protein [Fulvimarina pelagi HTCC2506]
 gi|114537706|gb|EAU40830.1| flagellar basal body rod protein [Fulvimarina pelagi HTCC2506]
          Length = 240

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 63  VKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
              +  D  +T V EF   + V    G V+  NVN + E   +    R + +    ++ +
Sbjct: 170 TSGVVSDVPATPVVEFLTDNVV---QGYVEEANVNPVQEMTRLIALQRAFESAANVVQTN 226

Query: 122 HDMMTTTLDLL 132
              ++  +  L
Sbjct: 227 DRSLSEAIKAL 237



 Score = 41.1 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 7/63 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S  +A SG      R++ ++ NIANART G       +R + + FEE++  +    V
Sbjct: 1  METSLPVALSGQIAMEKRLETLAHNIANARTVG-------FRAEEVRFEELLSHTAPDPV 53

Query: 64 KKI 66
            +
Sbjct: 54 AFV 56


>gi|27363704|ref|NP_759232.1| flagellar basal body rod protein FlgF [Vibrio vulnificus CMCP6]
 gi|27359820|gb|AAO08759.1| flagellar basal-body rod protein FlgF [Vibrio vulnificus CMCP6]
          Length = 249

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 78  DPGHPV-ANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +P  P  A+ +     G ++  NVN + E   + +  R +   ++ +  + +M  ++  L
Sbjct: 186 EPNQPYEADPTVQIMTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEEMDKSSDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|271500066|ref|YP_003333091.1| fagellar hook-basal body protein [Dickeya dadantii Ech586]
 gi|270343621|gb|ACZ76386.1| fagellar hook-basal body protein [Dickeya dadantii Ech586]
          Length = 399

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 360 SNVDMSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 398



 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   S+ + +I  NIAN+ T G       ++   ISF ++  GS    G +V
Sbjct: 2  SFSQAVSGLNAASSNLDVIGNNIANSATVG-------FKASNISFADMYAGSNVGLGTKV 54

Query: 64 KKIGVD 69
            +  D
Sbjct: 55 ASVLQD 60


>gi|239995125|ref|ZP_04715649.1| flagellar hook protein FlgE [Alteromonas macleodii ATCC 27126]
          Length = 461

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 4/44 (9%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRR 46
          S +IA SG++     + + + NIAN  T G         D Y  
Sbjct: 2  SFNIALSGVSAAQKDLDVTANNIANVNTVGFKESRAEFGDVYAA 45



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NVN+  E  DM    R + AN + ++ ++ +  T L++
Sbjct: 423 NVNLTTELIDMIIAQRNFQANSRALEVNNSLNQTILNI 460


>gi|120603704|ref|YP_968104.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris DP4]
 gi|120563933|gb|ABM29677.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris DP4]
          Length = 136

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 17/114 (14%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--VRVKKIGVDQST 72
           + +Q  R  ++  NIAN RT G       Y+ + + FE+ +  + G   + +    ++  
Sbjct: 16  MDMQLQRQNVVMSNIANVRTPG-------YKPRELEFEKELQSALGLDAKGRMTITEKQH 68

Query: 73  FVEEFDPGHPVANASGIVKYP-------NVNVLVETADMRETNRLYMANLQTIK 119
               FDP             P        VN+  E   M + +  Y A    IK
Sbjct: 69  LPAVFDPEG-FGPEWSKTFKPRVVHGEDRVNLDKEMTKMAKASLQYNALATVIK 121


>gi|146277702|ref|YP_001167861.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17025]
 gi|145555943|gb|ABP70556.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17025]
          Length = 1365

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 17/74 (22%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------ 58
          ++   IA SG+    + + + +ENIAN  T G       Y R+ +   +V  G       
Sbjct: 1  MSILDIARSGILSYRSALSVTAENIANVNTEG-------YVRREVVLAQVPGGQVSPTSA 53

Query: 59 ----GGVRVKKIGV 68
               GVRV+ +  
Sbjct: 54 AGSGQGVRVEDVRR 67


>gi|319790435|ref|YP_004152068.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1]
 gi|317114937|gb|ADU97427.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1]
          Length = 238

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 79  PGHPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P    A    G ++  NVN + E  ++ E  R +       +    +   T ++ +
Sbjct: 182 PTATDAEVLQGFLEGSNVNPVKEMVNLIEAQRRFEIYGNLTRALAQVDLRTNEIGK 237


>gi|300716218|ref|YP_003741021.1| flagellar biosynthesis, hook protein [Erwinia billingiae Eb661]
 gi|299062054|emb|CAX59170.1| Flagellar biosynthesis, hook protein [Erwinia billingiae Eb661]
          Length = 414

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 369 AGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 413



 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   S+ + +I  NIAN+ T G       ++  T+SF ++   S    GV+V
Sbjct: 2  AFSQAVSGLNAASSNLDVIGNNIANSATVG-------FKSATVSFADMFADSKVGLGVKV 54

Query: 64 KKIGVD 69
            +  D
Sbjct: 55 AAVTQD 60


>gi|218660672|ref|ZP_03516602.1| flagellar hook protein FlgE [Rhizobium etli IE4771]
          Length = 374

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E+ R Y AN +  +   D+M   ++L R
Sbjct: 327 KSGALEGSNVDLAGELTEMIESQRSYTANSKVFQTGSDIMDVLVNLKR 374


>gi|152975165|ref|YP_001374682.1| flagellar hook protein FlgE [Bacillus cereus subsp. cytotoxis NVH
          391-98]
 gi|152023917|gb|ABS21687.1| protein of unknown function DUF1078 domain protein [Bacillus
          cytotoxicus NVH 391-98]
          Length = 467

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S + + SG++     + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKSLYTSISGMSAMQNALSVTSNNIANAQTVG-------YKKQKAVFDDLLYNN 48



 Score = 40.3 bits (94), Expect = 0.096,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S D++   ++L+R
Sbjct: 425 EGSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDDVLNEVVNLIR 467


>gi|228952123|ref|ZP_04114218.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229043497|ref|ZP_04191207.1| Flagellar basal-body rod protein [Bacillus cereus AH676]
 gi|229109200|ref|ZP_04238799.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-15]
 gi|229127069|ref|ZP_04256068.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-Cer4]
 gi|229144355|ref|ZP_04272761.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST24]
 gi|228639142|gb|EEK95566.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST24]
 gi|228656422|gb|EEL12261.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-Cer4]
 gi|228674210|gb|EEL29455.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-15]
 gi|228725875|gb|EEL77122.1| Flagellar basal-body rod protein [Bacillus cereus AH676]
 gi|228807655|gb|EEM54179.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 147

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 32  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 84

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 85  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 140

Query: 125 MTTT 128
               
Sbjct: 141 NQAA 144


>gi|169831914|ref|YP_001717896.1| flagellar basal-body rod protein FlgB [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638758|gb|ACA60264.1| flagellar basal-body rod protein FlgB [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 132

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 28/124 (22%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
           D +++        L  Q+ R ++I+ NIAN  T G       ++R  + F+  M  +   
Sbjct: 5   DPVMSLL---ARALDGQAVRQRVIAHNIANLNTPG-------FKRSRVDFQAFMQAALDD 54

Query: 59  GGVRVKKI---------GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
             VR+K+          G D    VE        A+ +      NV++  E  ++ +   
Sbjct: 55  SAVRMKRTDPRHLAGRAGDDNGPQVEIVRGTSQRADGN------NVDLEREMVELVDNVL 108

Query: 110 LYMA 113
            Y A
Sbjct: 109 GYRA 112


>gi|254255087|ref|ZP_04948404.1| Flagellar hook protein FlgE [Burkholderia dolosa AUO158]
 gi|124899732|gb|EAY71575.1| Flagellar hook protein FlgE [Burkholderia dolosa AUO158]
          Length = 419

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G ++  NV +  E  ++    + Y AN + +   ++M+ T +  L
Sbjct: 375 GALEQSNVELTEELVNLMSAQQNYQANSKVLSTENEMVRTLMQTL 419



 Score = 37.6 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 9/61 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGVRVK 64
          S +IA SG+   + ++  IS+NIANA T G       Y+    +F     GS  GGV V 
Sbjct: 30 SFNIALSGIKAINGQLGEISQNIANAGTYG-------YKAGRANFSAFYLGSTPGGVMVG 82

Query: 65 K 65
           
Sbjct: 83 S 83


>gi|172058672|ref|YP_001815132.1| hypothetical protein Exig_2667 [Exiguobacterium sibiricum 255-15]
 gi|171991193|gb|ACB62115.1| protein of unknown function DUF1078 domain protein [Exiguobacterium
           sibiricum 255-15]
          Length = 260

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           G ++  NV++  E  ++ +  R Y  N + +  S  MM
Sbjct: 216 GTLETSNVDMATEMTNLTQIQRAYQFNSKALTTSDQMM 253


>gi|209695761|ref|YP_002263691.1| flagellar basal body rod protein FlgF [Aliivibrio salmonicida
           LFI1238]
 gi|208009714|emb|CAQ80018.1| flagellar basal-body rod protein FlgF [Aliivibrio salmonicida
           LFI1238]
          Length = 241

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 16/100 (16%)

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEF----------DPGHPV-ANA-----SGIVKYP 93
             E+         V +I + ++   + F          +P +   A+A      G ++  
Sbjct: 140 VLEQGAPAEAMAEVDRIKLVKTDNRDLFKDTNGLFRSKNPNNAFQADASVTVLKGALEGS 199

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVN + E  ++ +  R +   ++ +  + +M   +  LLR
Sbjct: 200 NVNAVGEMTNLIDLQRQFEMQVKMMSTAEEMDKASSSLLR 239


>gi|170737038|ref|YP_001778298.1| flagellar basal body FlaE domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169819226|gb|ACA93808.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 389

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           V+  NV++  E   +    + Y AN + +   ++MM   +  L
Sbjct: 347 VEQSNVDMTAELVSLMGAQQNYQANSKVLSTENEMMRALMQAL 389


>gi|332140546|ref|YP_004426284.1| flagellar hook protein FlgE [Alteromonas macleodii str. 'Deep
          ecotype']
 gi|327550568|gb|AEA97286.1| flagellar hook protein FlgE [Alteromonas macleodii str. 'Deep
          ecotype']
          Length = 461

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 4/44 (9%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRR 46
          S +IA SG++     + + + NIAN  T G         D Y  
Sbjct: 2  SFNIALSGVSAAQKDLDVTANNIANVNTVGFKESRAEFGDVYAA 45



 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NVN+  E  DM    R + AN + ++ ++ +  T L++
Sbjct: 423 NVNLTTELIDMIIAQRNFQANSRALEVNNSLNQTILNI 460


>gi|126462483|ref|YP_001043597.1| hypothetical protein Rsph17029_1715 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104147|gb|ABN76825.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 251

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NVN + E     E  R +  NL+ I  + ++  +   LLR
Sbjct: 202 QGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKELDESGARLLR 248


>gi|126175146|ref|YP_001051295.1| flagellar hook protein FlgE [Shewanella baltica OS155]
 gi|125998351|gb|ABN62426.1| flagellar basal body FlaE domain protein [Shewanella baltica OS155]
          Length = 460

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 419 EQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 459



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHG-SGGV 61
          S +IA SG+A     +   + NIANA T G        +D Y      F        GGV
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANANTIGFKESRAEFADVYA--NSIFSNAKTAVGGGV 59

Query: 62 RVKKIGV 68
             ++  
Sbjct: 60 ATSQVAQ 66


>gi|283955452|ref|ZP_06372950.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793079|gb|EFC31850.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           414]
          Length = 544

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 27/46 (58%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++ VE +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 499 GFLEQSNVDLSVELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 544


>gi|260767768|ref|ZP_05876703.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
 gi|260617277|gb|EEX42461.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
 gi|315179400|gb|ADT86314.1| flagellar basal body rod protein FlgF [Vibrio furnissii NCTC 11218]
          Length = 249

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 83  VANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ANA+     G V+  NVN + E   + +  R +   ++ +  + DM  ++  LLR
Sbjct: 192 DANANVKILTGAVEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEDMDKSSDSLLR 247


>gi|148976395|ref|ZP_01813101.1| polar flagellar FlgF [Vibrionales bacterium SWAT-3]
 gi|145964218|gb|EDK29474.1| polar flagellar FlgF [Vibrionales bacterium SWAT-3]
          Length = 249

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NVN + E   + +  R +   ++ +  + +M  ++  LLR
Sbjct: 201 KGAVEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDSLLR 247


>gi|304409978|ref|ZP_07391597.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|307302309|ref|ZP_07582067.1| fagellar hook-basal body protein [Shewanella baltica BA175]
 gi|304351387|gb|EFM15786.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|306914347|gb|EFN44768.1| fagellar hook-basal body protein [Shewanella baltica BA175]
          Length = 453

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 412 EQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTILQI 452



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHG-SGGV 61
          S +IA SG+A     +   + NIANA T G        +D Y      F        GGV
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANANTIGFKESRAEFADVYA--NSIFSNAKTAVGGGV 59

Query: 62 RVKKIGV 68
             ++  
Sbjct: 60 ATSQVAQ 66


>gi|291526818|emb|CBK92404.1| flagellar hook-associated protein FlgK [Eubacterium rectale
          M104/1]
          Length = 569

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 21/80 (26%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------- 52
          M     S ++ +SGL      +   + N+AN  TTG       Y R+ + F         
Sbjct: 1  MANGFGSFYVGSSGLKNSQNALNTTANNMANVNTTG-------YVRQQVRFSDKHYITRN 53

Query: 53 ------EVMHGSGGVRVKKI 66
                 +     GV V  +
Sbjct: 54 NPTAGTNIQQSGLGVSVSDV 73


>gi|228920454|ref|ZP_04083799.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229178152|ref|ZP_04305523.1| Flagellar basal-body rod protein [Bacillus cereus 172560W]
 gi|228605282|gb|EEK62732.1| Flagellar basal-body rod protein [Bacillus cereus 172560W]
 gi|228839084|gb|EEM84380.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 138

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 23  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 75

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 76  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISVNAINTQYAI 131

Query: 125 MTTT 128
               
Sbjct: 132 NQAA 135


>gi|126697841|ref|YP_001086738.1| flagellar basal body rod protein FlgG [Clostridium difficile 630]
 gi|255305297|ref|ZP_05349469.1| flagellar basal body rod protein FlgG [Clostridium difficile ATCC
           43255]
 gi|115249278|emb|CAJ67091.1| Flagellar basal body rod protein FlgG [Clostridium difficile]
          Length = 253

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G  +  NV++  E  D+  T R +  N + IK + +M     +L
Sbjct: 206 QGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKTADEMWQIANNL 250



 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +    + + + L+   +++ IIS NIAN+ +TG
Sbjct: 1  MYTMFYTSKTALSANQSKLDIISNNIANSDSTG 33


>gi|255605341|ref|XP_002538377.1| Flagellar L-ring protein precursor, putative [Ricinus communis]
 gi|223512459|gb|EEF24006.1| Flagellar L-ring protein precursor, putative [Ricinus communis]
          Length = 334

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYM 112
            G+++  NVNV+ E  DM ET R Y 
Sbjct: 80  QGMLEGSNVNVVEELVDMIETQRAYE 105


>gi|114765247|ref|ZP_01444379.1| putative flagellar hook protein [Pelagibaca bermudensis HTCC2601]
 gi|114542382|gb|EAU45410.1| putative flagellar hook protein [Roseovarius sp. HTCC2601]
          Length = 433

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG V+  NV++  E   + +  R Y +N + I  + +M+  T++L R
Sbjct: 387 SGGVESANVDIAEELTSLIQRQRAYSSNAKIITTADEMLNETVNLKR 433


>gi|315123658|ref|YP_004065662.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017380|gb|ADT65473.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 544

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 499 GFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 544


>gi|300024588|ref|YP_003757199.1| flagellar hook-basal body protein [Hyphomicrobium denitrificans
          ATCC 51888]
 gi|299526409|gb|ADJ24878.1| flagellar hook-basal body protein [Hyphomicrobium denitrificans
          ATCC 51888]
          Length = 417

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          L      + SG+AVQS RM  +++NIAN  TTG    S
Sbjct: 3  LYGLMTTSISGMAVQSDRMGTVADNIANVNTTGYKEAS 40



 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  +V++  E   M E  R Y AN +  +   +++   ++L+R
Sbjct: 371 SGALEKSSVDLASELTTMVEAQRSYTANSKVFQTGTELLDVLVNLVR 417


>gi|302387788|ref|YP_003823610.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
 gi|302198416|gb|ADL05987.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
          Length = 533

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++   V++  E  +M  T R + AN + I  +  M+   +++ R
Sbjct: 489 YLEQAKVDLATEMTEMITTQRGFQANSKIITVTDQMLDELVNMKR 533


>gi|284925346|gb|ADC27698.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 544

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 499 GFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 544


>gi|183598617|ref|ZP_02960110.1| hypothetical protein PROSTU_02017 [Providencia stuartii ATCC 25827]
 gi|188020796|gb|EDU58836.1| hypothetical protein PROSTU_02017 [Providencia stuartii ATCC 25827]
          Length = 406

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    M+ T ++L
Sbjct: 361 SGALESSNVDMSQELINMIVMQRNYQSNAQTIKTQDQMLQTMVNL 405



 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 12/90 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   SA +  I  NIAN+ T G       ++  T SF ++  GSG   GV V
Sbjct: 2  SFSQAVSGLNAASAGLDSIGNNIANSATNG-------FKGATTSFADMFAGSGVGLGVNV 54

Query: 64 KKIGVD--QSTFVEEFDPGHPVANASGIVK 91
            +  +           P     + +G  +
Sbjct: 55 AAVTQNFKDGPITRTDRPTDVAISGNGFFR 84


>gi|30261742|ref|NP_844119.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           Ames]
 gi|47526962|ref|YP_018311.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184572|ref|YP_027824.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           Sterne]
 gi|65319011|ref|ZP_00391970.1| COG1815: Flagellar basal body protein [Bacillus anthracis str.
           A2012]
 gi|165869479|ref|ZP_02214138.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0488]
 gi|167633168|ref|ZP_02391493.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0442]
 gi|167639175|ref|ZP_02397448.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0193]
 gi|170686191|ref|ZP_02877413.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0465]
 gi|170706512|ref|ZP_02896972.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0389]
 gi|177650628|ref|ZP_02933595.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0174]
 gi|190566366|ref|ZP_03019284.1| flagellar basal-body rod protein FlgB [Bacillus anthracis
           Tsiankovskii-I]
 gi|227815499|ref|YP_002815508.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. CDC
           684]
 gi|229601762|ref|YP_002866142.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0248]
 gi|254683232|ref|ZP_05147093.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723820|ref|ZP_05185606.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           A1055]
 gi|254734584|ref|ZP_05192296.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           Western North America USA6153]
 gi|254740993|ref|ZP_05198681.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           Kruger B]
 gi|254755236|ref|ZP_05207270.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           Vollum]
 gi|254759772|ref|ZP_05211796.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           Australia 94]
 gi|30255970|gb|AAP25605.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           Ames]
 gi|47502110|gb|AAT30786.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178499|gb|AAT53875.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           Sterne]
 gi|164714919|gb|EDR20437.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0488]
 gi|167512965|gb|EDR88338.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0193]
 gi|167531206|gb|EDR93884.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0442]
 gi|170128610|gb|EDS97477.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0389]
 gi|170669888|gb|EDT20629.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0465]
 gi|172083772|gb|EDT68832.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0174]
 gi|190562501|gb|EDV16468.1| flagellar basal-body rod protein FlgB [Bacillus anthracis
           Tsiankovskii-I]
 gi|227006070|gb|ACP15813.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. CDC
           684]
 gi|229266170|gb|ACQ47807.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0248]
          Length = 135

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           V   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 73  VPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|315057484|gb|ADT71813.1| Flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni S3]
 gi|315926889|gb|EFV06255.1| flagella basal body rod family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315926904|gb|EFV06270.1| flagella basal body rod family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 544

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 499 GFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 544


>gi|251789168|ref|YP_003003889.1| flagellar hook protein FlgE [Dickeya zeae Ech1591]
 gi|247537789|gb|ACT06410.1| flagellar basal body FlaE domain protein [Dickeya zeae Ech1591]
          Length = 405

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 366 SNVDMSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 404



 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   S  + +I  NIAN+ T G       ++   ISF ++  GS    G RV
Sbjct: 2  SFSQAVSGLNAASNNLDVIGNNIANSATVG-------FKASNISFADMYAGSNVGLGTRV 54

Query: 64 KKIGVD 69
            +  D
Sbjct: 55 ASVLQD 60


>gi|84514833|ref|ZP_01002196.1| hypothetical protein SKA53_11453 [Loktanella vestfoldensis SKA53]
 gi|84510992|gb|EAQ07446.1| hypothetical protein SKA53_11453 [Loktanella vestfoldensis SKA53]
          Length = 1778

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query: 86   ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             SG ++  NV++  E  ++    R + A  + I+ S  +  T +++
Sbjct: 1731 QSGALERSNVDITEELVNLITAQRNFQAASKAIETSTQLTQTIINI 1776


>gi|46578732|ref|YP_009540.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448144|gb|AAS94799.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232604|gb|ADP85458.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris RCH1]
          Length = 136

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 17/114 (14%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--VRVKKIGVDQST 72
           + +Q  R  ++  NIAN RT G       Y+ + + FE+ +  + G   + +    ++  
Sbjct: 16  MDMQLQRQNVVMSNIANVRTPG-------YKPRELEFEKELQSALGLDAKGRMTITEKQH 68

Query: 73  FVEEFDPGHPVANASGIVKYP-------NVNVLVETADMRETNRLYMANLQTIK 119
               FDP             P        VN+  E   M + +  Y A    IK
Sbjct: 69  LPAVFDPEG-FGPEWSKTFKPRVVHGEDRVNLDKEMTKMAKASLQYNALATVIK 121


>gi|86149558|ref|ZP_01067788.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85839826|gb|EAQ57085.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 545

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 500 GFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|116626495|ref|YP_828651.1| hypothetical protein Acid_7458 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229657|gb|ABJ88366.1| protein of unknown function DUF1078 domain protein [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 421

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++   V++  E  ++    R Y AN + I    ++   T++L R
Sbjct: 376 GAIEASTVDIAKEFTNLIVLQRGYQANSRVITTVDELSQETINLKR 421



 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A S L+  +  + ++  N+AN  T G       +R   +  + +  G G  +V
Sbjct: 1  MFTSFSTALSALSATATAVDVVGNNLANLNTPGFKTNVVYFR--DLVTQSLGAGLGETQV 58


>gi|295697724|ref|YP_003590962.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
 gi|295413326|gb|ADG07818.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
          Length = 273

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NV+       M +  R Y AN + I+     M   ++
Sbjct: 223 QGFLEQSNVDPGQTMVQMIDVVRAYEANQKVIRTVDQSMDKLVN 266



 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 9/86 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG--------DTPGSDPYRRK-TISFEEV 54
          +I   +IA SG+  Q  R +I++ N+ NA T G         T G    RR  + +    
Sbjct: 1  MIRGLYIAASGMIAQQRREEIVANNLVNASTPGYKQDEPSLRTFGDLFLRRLGSPASGTA 60

Query: 55 MHGSGGVRVKKIGVDQSTFVEEFDPG 80
          +  + GV    +G         F PG
Sbjct: 61 LPLAPGVGPLNLGATMEDAPPRFTPG 86


>gi|261856360|ref|YP_003263643.1| flagellar hook-basal body protein [Halothiobacillus neapolitanus
           c2]
 gi|261836829|gb|ACX96596.1| flagellar hook-basal body protein [Halothiobacillus neapolitanus
           c2]
          Length = 418

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 21/44 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G ++  NV++  +  ++    R + AN Q I+       + +++
Sbjct: 374 GALEQSNVDLTQQLVNLITAQRNFQANAQAIQTDKTATDSVINI 417



 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S + + +GL      + + S NIANA +TG
Sbjct: 2  SFNTSITGLNAAQKDLDVTSNNIANANSTG 31


>gi|255767784|ref|NP_391520.2| flagellar hook-basal body protein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|254763418|sp|P39753|FLHP_BACSU RecName: Full=Flagellar hook-basal body complex protein flhP
 gi|225185412|emb|CAB15656.2| putative flagellar hook-basal body protein [Bacillus subtilis
           subsp. subtilis str. 168]
          Length = 269

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  +  D+  + R Y  N +TI     M+
Sbjct: 223 QQGSLEMSNVDISEQMTDLITSQRSYQLNSRTITMGDQML 262



 Score = 33.7 bits (77), Expect = 8.0,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A++ L     ++  IS N++N+ TTG       Y+ K  +F E++   
Sbjct: 1  MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTG-------YKAKDTNFSELVRQQ 48


>gi|206970568|ref|ZP_03231520.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH1134]
 gi|218232483|ref|YP_002366428.1| flagellar basal body rod protein FlgB [Bacillus cereus B4264]
 gi|229069295|ref|ZP_04202585.1| Flagellar basal-body rod protein [Bacillus cereus F65185]
 gi|229078925|ref|ZP_04211477.1| Flagellar basal-body rod protein [Bacillus cereus Rock4-2]
 gi|206734204|gb|EDZ51374.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH1134]
 gi|218160440|gb|ACK60432.1| flagellar basal-body rod protein FlgB [Bacillus cereus B4264]
 gi|228704339|gb|EEL56773.1| Flagellar basal-body rod protein [Bacillus cereus Rock4-2]
 gi|228713782|gb|EEL65667.1| Flagellar basal-body rod protein [Bacillus cereus F65185]
          Length = 135

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISVNAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|162661125|gb|EDQ48677.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 515

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 12/70 (17%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ--- 70
            L +++ R+ II+ NIANA T G       Y+ K + F+E +  S    +      +   
Sbjct: 396 ALKIRTQRLAIIASNIANADTPG-------YQAKDLDFKEALERSNATMLSVSSTSKGHI 448

Query: 71  --STFVEEFD 78
             S     +D
Sbjct: 449 PSSEMKSIYD 458


>gi|153834440|ref|ZP_01987107.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01]
 gi|156973588|ref|YP_001444495.1| flagellar basal body rod protein FlgF [Vibrio harveyi ATCC
           BAA-1116]
 gi|269961600|ref|ZP_06175962.1| flagellar basal-body rod protein FlgF [Vibrio harveyi 1DA3]
 gi|148869136|gb|EDL68168.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01]
 gi|156525182|gb|ABU70268.1| hypothetical protein VIBHAR_01291 [Vibrio harveyi ATCC BAA-1116]
 gi|269833641|gb|EEZ87738.1| flagellar basal-body rod protein FlgF [Vibrio harveyi 1DA3]
          Length = 249

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 30/62 (48%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           T  + ++    ++  +G ++  NVN + E   + +  R +   ++ +  + +M  ++  L
Sbjct: 186 TPNQPYEADGSISIQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEEMDKSSDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|160880840|ref|YP_001559808.1| hypothetical protein Cphy_2708 [Clostridium phytofermentans ISDg]
 gi|160429506|gb|ABX43069.1| protein of unknown function DUF1078 domain protein [Clostridium
           phytofermentans ISDg]
          Length = 479

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NV++  +  +M  T R + AN + I  S  ++   ++L R
Sbjct: 433 TGVLEMSNVDLSQQFTEMITTQRGFQANSRIITTSDTLLEELINLKR 479



 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL V   +M +I  NI+N  T G       ++  + +F ++++ +
Sbjct: 1  MMRSLYSGVSGLRVHQTKMDVIGNNISNVNTVG-------FKASSATFSDILYQT 48


>gi|260767929|ref|ZP_05876863.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
          102972]
 gi|260615959|gb|EEX41144.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
          102972]
 gi|315179632|gb|ADT86546.1| flagellar hook-associated protein [Vibrio furnissii NCTC 11218]
          Length = 457

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 14/75 (18%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MHGSGGV 61
          +IA SGL      + + ++N+AN  T G       Y R+      V       +    GV
Sbjct: 5  NIALSGLNANRVALDVTAQNVANINTPG-------YSRQQALMASVGGAKYDNLSAGMGV 57

Query: 62 RVKKIGVDQSTFVEE 76
           V  I      F+ +
Sbjct: 58 EVTSIRRVTDQFLVK 72


>gi|257871286|ref|ZP_05650939.1| flagellar basal-body rod protein FlgB [Enterococcus gallinarum EG2]
 gi|257805450|gb|EEV34272.1| flagellar basal-body rod protein FlgB [Enterococcus gallinarum EG2]
          Length = 136

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 16/130 (12%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMHGSG 59
           L+ + ++  + + V + R ++IS NIAN  T G       Y+ K I FE    + +  SG
Sbjct: 17  LLDTYNLLKTAMNVSAQRAELISSNIANVNTDG-------YKAKRIVFESELKQALASSG 69

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                +  V Q       +    + + +G     NV++ VE  D       Y A    + 
Sbjct: 70  TDAATEASVSQVKPKITENATTSIKD-NGN----NVDLEVEMLDQAANGLYYSALTAQVN 124

Query: 120 QSHDMMTTTL 129
               MM   L
Sbjct: 125 GRLQMMNLVL 134


>gi|253702425|ref|YP_003023614.1| flagellar hook-associated protein FlgK [Geobacter sp. M21]
 gi|251777275|gb|ACT19856.1| flagellar hook-associated protein FlgK [Geobacter sp. M21]
          Length = 480

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 14/68 (20%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------G 60
            IA+SG+  Q   +++  ENIAN  T G       Y R+ +  E     +        G
Sbjct: 7  FDIASSGVTAQRLAIEVTGENIANVNTEG-------YSRQQVIMETKPVTTANGFPLGTG 59

Query: 61 VRVKKIGV 68
          V++  +  
Sbjct: 60 VQIAAVQR 67


>gi|86154050|ref|ZP_01072251.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842464|gb|EAQ59678.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 545

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 500 GFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|238922533|ref|YP_002936046.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC
          33656]
 gi|238874205|gb|ACR73912.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC
          33656]
 gi|291526373|emb|CBK91960.1| flagellar hook-associated protein FlgK [Eubacterium rectale DSM
          17629]
          Length = 569

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 21/80 (26%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------- 52
          M     S ++ +SGL      +   + N+AN  TTG       Y R+ + F         
Sbjct: 1  MANGFGSFYVGSSGLKNSQNALNTTANNMANVNTTG-------YVRQQVRFSDKHYITRN 53

Query: 53 ------EVMHGSGGVRVKKI 66
                 +     GV V  +
Sbjct: 54 NPTAGTNIQQSGLGVSVSDV 73


>gi|148926857|ref|ZP_01810535.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145844434|gb|EDK21542.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 545

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 500 GFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|121612241|ref|YP_999769.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|157414368|ref|YP_001481624.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 81116]
 gi|167004743|ref|ZP_02270501.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87249055|gb|EAQ72017.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|157385332|gb|ABV51647.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747010|gb|ADN90280.1| Flagellar hook protein [Campylobacter jejuni subsp. jejuni M1]
 gi|315931630|gb|EFV10595.1| flagella basal body rod family protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 545

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 500 GFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|313905135|ref|ZP_07838504.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
 gi|313470038|gb|EFR65371.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
          Length = 336

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E +DM  T R + AN + I  S +++   +++ R
Sbjct: 291 GYLEGSNVDLAKEFSDMITTERGFQANAKLITVSDEVLQELVNMKR 336



 Score = 38.4 bits (89), Expect = 0.37,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ +   A SGL     ++ ++  NIAN  T G    S  Y  K   ++     SGG R
Sbjct: 1  MLRAMDSAVSGLRSHQNKLDVLGNNIANVNTNGFK--SQNYTFKDAMYQTSAASSGGAR 57


>gi|321313186|ref|YP_004205473.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
 gi|291486214|dbj|BAI87289.1| flagellar hook-basal body protein [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019460|gb|ADV94446.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
          Length = 269

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  +  D+  + R Y  N +TI     M+
Sbjct: 223 QQGSLEMSNVDISEQMTDLITSQRSYQLNSRTITMGDQML 262



 Score = 33.7 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A++ L     ++  IS N++N+ TTG       Y+ K  +F E++   
Sbjct: 1  MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTG-------YKAKDTNFSELVRQQ 48


>gi|205375363|ref|ZP_03228153.1| flagellar hook-basal body complex protein [Bacillus coahuilensis
           m4-4]
          Length = 279

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  E  DM    R Y    +TI  +  MM
Sbjct: 233 KQGFIEKSNVDLSKELTDMINVQRSYQFQARTISMADQMM 272



 Score = 33.7 bits (77), Expect = 7.8,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 9/53 (16%)

Query: 4  LIASAHIANSGLAVQ-SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          +    ++A + +  Q    + +IS N+AN  T G       Y+ +   F E++
Sbjct: 1  MNRIMNVATNTM-AQLQQHLDVISHNVANVDTNG-------YKAQNARFSEML 45


>gi|205375362|ref|ZP_03228152.1| flagellar basal-body rod protein [Bacillus coahuilensis m4-4]
          Length = 270

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
            G ++  NVN      DM    R + AN + ++     +     ++ R
Sbjct: 222 QGFLENSNVNESQTMTDMMTAYRSFEANQKLLQAYDKSLDKAVNEIGR 269



 Score = 40.3 bits (94), Expect = 0.093,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++   + A SG+  Q  + + ++ N+ANA T G
Sbjct: 1  MLRGLYTAASGMIAQQRKTETLANNLANANTPG 33


>gi|57237057|ref|YP_178069.1| flagellar hook protein [Campylobacter jejuni RM1221]
 gi|88597731|ref|ZP_01100964.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|205356434|ref|ZP_03223198.1| hypothetical protein Cj8421_0048 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|218561735|ref|YP_002343514.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|57165861|gb|AAW34640.1| flagellar hook protein [Campylobacter jejuni RM1221]
 gi|88190035|gb|EAQ94011.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359441|emb|CAL34223.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|205345621|gb|EDZ32260.1| hypothetical protein Cj8421_0048 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|315929148|gb|EFV08373.1| flagella basal body rod family protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 545

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 500 GFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|88799022|ref|ZP_01114603.1| Flagellar basal body rod protein [Reinekea sp. MED297]
 gi|88778249|gb|EAR09443.1| Flagellar basal body rod protein [Reinekea sp. MED297]
          Length = 247

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG V+  NVN + E  ++   NR Y   ++ +K + D+   +  +L+
Sbjct: 199 SGFVEASNVNSVHELTNLLALNRQYETQVKMMKTADDVSRASERILQ 245


>gi|148266214|ref|YP_001232920.1| hypothetical protein Gura_4204 [Geobacter uraniireducens Rf4]
 gi|146399714|gb|ABQ28347.1| protein of unknown function DUF1078 domain protein [Geobacter
           uraniireducens Rf4]
          Length = 294

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  +   M  T R Y AN +TI  + +M    L L R
Sbjct: 252 EQSNVDMASQFVKMIITQRAYSANSKTITTADEMTQEILSLKR 294


>gi|315639349|ref|ZP_07894511.1| flagellar hook protein [Campylobacter upsaliensis JV21]
 gi|315480675|gb|EFU71317.1| flagellar hook protein [Campylobacter upsaliensis JV21]
          Length = 839

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R Y AN +TI  S  M+ T L L
Sbjct: 797 EMSNVDLSRSLTQLIVVQRGYQANSKTISTSDQMLNTLLQL 837


>gi|149195180|ref|ZP_01872271.1| flagellar basal-body rod protein B [Caminibacter mediatlanticus
           TB-2]
 gi|149134732|gb|EDM23217.1| flagellar basal-body rod protein B [Caminibacter mediatlanticus
           TB-2]
          Length = 142

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 31/153 (20%)

Query: 1   MDY-LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS- 58
           M + +  S  I    L  +  R  +I+ NIANA T         YR K I FE+ +    
Sbjct: 1   MAFEISKSFGIMEQALHYRKIRQDMIASNIANADT-------PFYRPKDIRFEDALQEEI 53

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDP------GHPVANASGIVKYPNVNVLVET 101
                         +   + ++     + + P      GH +A   G     +V++ VET
Sbjct: 54  NKKFNKPSKKLELAKTNPMHLEPKDIEDSYKPIVFFRDGH-LARNDGN----SVDIDVET 108

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            +M + N  Y A +Q +K+  ++    +D  ++
Sbjct: 109 TEMAKNNIAYNATIQALKKDIEIFKAVIDSSKN 141


>gi|305432527|ref|ZP_07401689.1| flagellar hook protein [Campylobacter coli JV20]
 gi|304444566|gb|EFM37217.1| flagellar hook protein [Campylobacter coli JV20]
          Length = 545

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 500 GFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|78044159|ref|YP_359861.1| flagellar hook-basal body rod protein [Carboxydothermus
          hydrogenoformans Z-2901]
 gi|77996274|gb|ABB15173.1| flagellar hook-basal body rod protein [Carboxydothermus
          hydrogenoformans Z-2901]
          Length = 244

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 10/67 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---FEEVMHGSGG 60
          ++   +I+ +GL     ++  ++ NIAN  T G       YR        FEE +    G
Sbjct: 1  MLRGIYISATGLKAGLKQLDTVANNIANINTVG-------YRADITVNSGFEEKILNYAG 53

Query: 61 VRVKKIG 67
            V K+ 
Sbjct: 54 KEVGKLE 60


>gi|86151187|ref|ZP_01069402.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841534|gb|EAQ58781.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 545

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 500 GFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|57169039|ref|ZP_00368167.1| flagellar hook protein flgE Cj0043 [Campylobacter coli RM2228]
 gi|57019584|gb|EAL56274.1| flagellar hook protein flgE Cj0043 [Campylobacter coli RM2228]
          Length = 545

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 26/46 (56%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 500 GFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|71280733|ref|YP_268222.1| flagellar hook protein FlgE [Colwellia psychrerythraea 34H]
 gi|71146473|gb|AAZ26946.1| flagellar hook protein FlgE [Colwellia psychrerythraea 34H]
          Length = 554

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NVN+  E  D+    R + AN + ++  + +  T L +
Sbjct: 513 EQSNVNLTTELIDLISAQRNFQANSRALEVDNQLNQTILQI 553



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +IA SGL      + + S NIAN  T G
Sbjct: 2  SFNIALSGLNAAQKDLDVSSNNIANVNTVG 31


>gi|34497159|ref|NP_901374.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472]
 gi|34103016|gb|AAQ59379.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472]
          Length = 393

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NV+V  E   +    R Y AN + I   + +M   + 
Sbjct: 352 EQSNVDVTSELVSLMTAQRNYQANTKVISTENQVMQALMQ 391


>gi|77463651|ref|YP_353155.1| flagellar proximal rod protein FlgF [Rhodobacter sphaeroides 2.4.1]
 gi|77388069|gb|ABA79254.1| flagellar proximal rod protein FlgF [Rhodobacter sphaeroides 2.4.1]
          Length = 251

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NVN + E     E  R +  NL+ I  + ++  +   LLR
Sbjct: 202 QGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKELDESGARLLR 248


>gi|146277707|ref|YP_001167866.1| hypothetical protein Rsph17025_1668 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555948|gb|ABP70561.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 251

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NVN + E     E  R +  NL+ I  + ++  +   LLR
Sbjct: 202 QGVLEGSNVNTMEELVSSIELQRTFELNLRMISAAKELDESGARLLR 248


>gi|114777912|ref|ZP_01452826.1| probable flagellar hook-associated protein [Mariprofundus
          ferrooxydans PV-1]
 gi|114551699|gb|EAU54251.1| probable flagellar hook-associated protein [Mariprofundus
          ferrooxydans PV-1]
          Length = 575

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 14/78 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          +  S +IA S L  Q   + ++S NIANA T G       Y R+      +   S     
Sbjct: 2  IFDSLNIAASSLQTQQKSINVVSHNIANANTAG-------YSRQVADIATLTPESVGGLS 54

Query: 59 --GGVRVKKIGVDQSTFV 74
             GV V  I       +
Sbjct: 55 LGRGVNVTGISRIVDPMI 72



 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN   E   M +  R Y A+ + I  ++ MM + L L+R
Sbjct: 535 SGVNTDEELVSMIKFQRAYEASAKIITTTNQMMDSLLGLIR 575


>gi|15616300|ref|NP_244605.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
 gi|10176362|dbj|BAB07457.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
          Length = 274

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  NV+      +M +  R + AN Q ++   + +   + ++ R
Sbjct: 224 QQGFIERSNVDAAQTMTEMMQAYRTFEANQQVLRAYDESLGKAVNEVGR 272


>gi|15022422|dbj|BAB62243.1| flagellar protein [Treponema medium]
          Length = 280

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L +      SG+     RM +I  NIAN  TTG       ++R  ++F++++   
Sbjct: 2  MRSLFSGV----SGMQNHQTRMDVIGNNIANVNTTG-------FKRGRVNFQDLISQQ 48


>gi|57506151|ref|ZP_00372072.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
 gi|57015546|gb|EAL52339.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
          Length = 853

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R Y AN +TI  S  M+ T L L
Sbjct: 811 EMSNVDLSRSLTQLIVVQRGYQANSKTISTSDQMLNTLLQL 851


>gi|158422269|ref|YP_001523561.1| flagellar basal body rod protein FlgF [Azorhizobium caulinodans ORS
           571]
 gi|158329158|dbj|BAF86643.1| flagellar basal body rod protein [Azorhizobium caulinodans ORS 571]
          Length = 240

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             I    +T V +++     A   G V+  NV+ ++E   +    R + +  Q I Q
Sbjct: 172 AVIPDKAATPVTDYNSN---AIRQGYVEGSNVDPVMEMTRLIMVQRAFESAAQAISQ 225



 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          +    ++A SG      RM  I+ N+AN  T G       YR + I F  +M   G
Sbjct: 1  MSNGLYVALSGQMATEKRMATIANNVANMNTPG-------YRAEEIKFSSIMAEQG 49


>gi|103488387|ref|YP_617948.1| protein of unknown function DUF1078-like protein [Sphingopyxis
           alaskensis RB2256]
 gi|98978464|gb|ABF54615.1| protein of unknown function DUF1078-like protein [Sphingopyxis
           alaskensis RB2256]
          Length = 275

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  SG ++  NV++  E   +    R + AN + I+ +  +  T + L
Sbjct: 227 AIRSGALERSNVDITEELVMLMAAQRNFQANAKAIEGASQLTQTIIGL 274



 Score = 37.2 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 7/60 (11%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S + + SGL      M +IS NIANA   G       ++R    F ++   S     K I
Sbjct: 2  SFYTSLSGLKASQTDMSVISNNIANAGAVG-------FKRSKAQFGDIFASSPTQSTKMI 54


>gi|332558507|ref|ZP_08412829.1| FlgF [Rhodobacter sphaeroides WS8N]
 gi|332276219|gb|EGJ21534.1| FlgF [Rhodobacter sphaeroides WS8N]
          Length = 251

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NVN + E     E  R +  NL+ I  + ++  +   LLR
Sbjct: 202 QGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKELDESGARLLR 248


>gi|163785676|ref|ZP_02180210.1| hypothetical protein HG1285_10440 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879057|gb|EDP73027.1| hypothetical protein HG1285_10440 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 58

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)

Query: 47 KTISFEEVMHGSGG-----VRVKKIGVDQSTFVEEFDPGHPVANA 86
          + + F+ ++    G     V+V KI  D+S F  +FDP +P+A+ 
Sbjct: 11 RFLFFKSILDKESGTPVYKVKVAKIEYDKSPFKVKFDPNNPLADK 55


>gi|126730121|ref|ZP_01745933.1| flagellar hook protein FlgE, putative [Sagittula stellata E-37]
 gi|126709501|gb|EBA08555.1| flagellar hook protein FlgE, putative [Sagittula stellata E-37]
          Length = 435

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E  DM +T R Y +N + I+   +M+  T ++ R
Sbjct: 398 DVAAELTDMIQTQRAYSSNAKVIQTVDEMLQETTNIKR 435



 Score = 40.7 bits (95), Expect = 0.071,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 14/68 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
          + +S +   +GL+  + R+  IS+NIAN+ T         Y+R    F  ++        
Sbjct: 3  ISSSLNAGVAGLSANATRLATISDNIANSAT-------QGYKRVETEFSAMVTSGNSGTY 55

Query: 58 -SGGVRVK 64
           +GGVR +
Sbjct: 56 TAGGVRTQ 63


>gi|47566126|ref|ZP_00237164.1| flagellar basal-body rod protein flgB [Bacillus cereus G9241]
 gi|47557043|gb|EAL15373.1| flagellar basal-body rod protein flgB [Bacillus cereus G9241]
          Length = 135

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        ++           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKSNTADLKTNPDLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|258511368|ref|YP_003184802.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478094|gb|ACV58413.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 134

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 20/117 (17%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK-KIGVDQS 71
           S L   + R  + + NIANA T G       Y+R+ ++FE ++  + G      +G  Q 
Sbjct: 9   SALDASTLRQAVYANNIANAGTPG-------YKRQDVAFETLLQSALGSGDSNALGEAQI 61

Query: 72  TF---VEEFDPGH-PVANASGIVKYP--------NVNVLVETADMRETNRLYMANLQ 116
                   +D    P                   NV++  E   M E    Y   +Q
Sbjct: 62  PIGAQRPSYDLSALPNVIPEVYTDTSTTVNSNGNNVDITEEMVLMAENQVRYDTLVQ 118


>gi|92114098|ref|YP_574026.1| flagellar basal body FlaE [Chromohalobacter salexigens DSM 3043]
 gi|91797188|gb|ABE59327.1| flagellar basal body FlaE [Chromohalobacter salexigens DSM 3043]
          Length = 387

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E  DM    R + AN   I+   D++ T  +L
Sbjct: 341 ESGTLEASNVDLTQELVDMIIAQRNFQANNNAIQTQSDILETVTNL 386



 Score = 37.2 bits (86), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 9/61 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVKKIGV 68
          + SG+   S+++  I  NIAN++T G       ++  ++ F ++   S   G RV     
Sbjct: 6  SLSGVNAASSQLDTIGNNIANSQTVG-------FKSSSVQFADIFANSQGLGTRVAGKLQ 58

Query: 69 D 69
          D
Sbjct: 59 D 59


>gi|221311596|ref|ZP_03593443.1| flagellar hook-basal body protein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315923|ref|ZP_03597728.1| flagellar hook-basal body protein [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320836|ref|ZP_03602130.1| flagellar hook-basal body protein [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|1763701|emb|CAB05941.1| flhP [Bacillus subtilis subsp. subtilis str. 168]
          Length = 268

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  +  D+  + R Y  N +TI     M+
Sbjct: 222 QQGSLEMSNVDISEQMTDLITSQRSYQLNSRTITMGDQML 261



 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A++ L     ++  IS N++N+ TTG       Y+ K  +F E++   
Sbjct: 1  MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTG-------YKAKDTNFSELVRQQ 48


>gi|322832564|ref|YP_004212591.1| flagellar hook-basal body protein [Rahnella sp. Y9602]
 gi|321167765|gb|ADW73464.1| flagellar hook-basal body protein [Rahnella sp. Y9602]
          Length = 414

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 369 SGALESSNVDLSAELVNMIVAQRNYQSNAQTIKTQDSILNTLVNL 413



 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL+  S  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  SFSQAVSGLSAASTNLDVIGNNIANSATVG-------FKTATASFADMFAGSQTGMGVKV 54

Query: 64 KKIGV 68
            +  
Sbjct: 55 AAVTQ 59


>gi|221639494|ref|YP_002525756.1| Flagellar proximal rod protein FlgF [Rhodobacter sphaeroides KD131]
 gi|221160275|gb|ACM01255.1| Flagellar proximal rod protein FlgF [Rhodobacter sphaeroides KD131]
          Length = 251

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NVN + E     E  R +  NL+ I  + ++  +   LLR
Sbjct: 202 QGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKELDESGARLLR 248


>gi|195953934|ref|YP_002122224.1| flagellar basal body rod protein [Hydrogenobaculum sp. Y04AAS1]
 gi|195933546|gb|ACG58246.1| flagellar basal body rod protein [Hydrogenobaculum sp. Y04AAS1]
          Length = 253

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 18/25 (72%)

Query: 12 NSGLAVQSARMQIISENIANARTTG 36
           SG++++  R+ +++ NIANA T G
Sbjct: 12 ASGMSLEQRRLDVVANNIANADTPG 36



 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 6/26 (23%), Positives = 13/26 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYM 112
            G ++  NVN + E   + + ++ Y 
Sbjct: 207 QGALEGSNVNPVREMVQLIDLSKAYQ 232


>gi|254437698|ref|ZP_05051192.1| flagellar basal-body rod protein FlgG [Octadecabacter antarcticus
          307]
 gi|198253144|gb|EDY77458.1| flagellar basal-body rod protein FlgG [Octadecabacter antarcticus
          307]
          Length = 257

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 12/64 (18%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           H+A +GL  Q  RMQ+I+ N++N  T G       ++   ++FE +++     +V + G
Sbjct: 1  MHVAKTGLNAQQTRMQVIANNLSNLNTVG-------FKSDRVNFESLLY-----QVSRAG 48

Query: 68 VDQS 71
           DQ+
Sbjct: 49 GDQT 52



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NVNV+ +  +M ET R Y  + + I  S +MM 
Sbjct: 212 QGALEASNVNVVQQLVEMIETQRAYEVSSKAITSSDEMMR 251


>gi|2459711|gb|AAB71787.1| FlgB [Agrobacterium tumefaciens]
          Length = 134

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 14/117 (11%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGS----GGVRVKKIGVDQSTF 73
           S R ++++ NIANA T         +  K +S FE VM  +    G  R   + + +ST 
Sbjct: 22  SVRQEVVATNIANANTPK-------FHAKDVSPFEAVMQATSQQVGMARTNPVHLGESTL 74

Query: 74  VEEFD-PGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            E      +PV N  G+ +  N V +  E     E  R Y  N   +K  H MM  T
Sbjct: 75  SENIAVRDNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLVKSFHRMMLMT 131


>gi|91225874|ref|ZP_01260843.1| polar flagellar FlgF [Vibrio alginolyticus 12G01]
 gi|254230139|ref|ZP_04923534.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|262394938|ref|YP_003286792.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|269965423|ref|ZP_06179542.1| flagellar basal-body rod protein FlgF [Vibrio alginolyticus 40B]
 gi|91189524|gb|EAS75800.1| polar flagellar FlgF [Vibrio alginolyticus 12G01]
 gi|151937332|gb|EDN56195.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|262338532|gb|ACY52327.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|269829902|gb|EEZ84132.1| flagellar basal-body rod protein FlgF [Vibrio alginolyticus 40B]
          Length = 249

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 79  PGHPV-ANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           P  P  A+A+     G ++  NVN + E   + +  R +   ++ +  + +M  ++  LL
Sbjct: 187 PNQPYEADATVSLQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEEMDKSSDSLL 246

Query: 133 R 133
           R
Sbjct: 247 R 247


>gi|242280400|ref|YP_002992529.1| hypothetical protein Desal_2938 [Desulfovibrio salexigens DSM 2638]
 gi|242123294|gb|ACS80990.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 528

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E A M  T R + AN + I  +  M+ T L +
Sbjct: 486 ETSNVDLADEFAYMILTQRGFQANSKGITTTDSMINTALGI 526


>gi|269103190|ref|ZP_06155887.1| flagellar hook protein FlgE [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163088|gb|EEZ41584.1| flagellar hook protein FlgE [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 449

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 24/48 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  SG ++  N+++  E  D+    R + A+ + ++ ++ +    L +
Sbjct: 401 AIKSGTLEQSNIDMTQELVDLITAQRNFQASSRALEVNNQLQQNILQI 448



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGS-GGV 61
          S +IA SGL      +   S NIANA T G         D Y      F      + GGV
Sbjct: 2  SVNIALSGLGAAQKDLNTTSNNIANANTYGFKESRAEFGDVY--SNSIFSNAKTSTGGGV 59

Query: 62 RVKKIGV 68
          +   +  
Sbjct: 60 QTSTVAQ 66


>gi|218461124|ref|ZP_03501215.1| flagellar hook protein FlgE [Rhizobium etli Kim 5]
          Length = 91

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M E+ R Y AN +  +   D+M   ++L R
Sbjct: 44  KSGALEGSNVDLAGELTEMIESQRSYTANSKVFQTGSDIMDVLVNLKR 91


>gi|288871078|ref|ZP_06116279.2| flagellar hook protein [Clostridium hathewayi DSM 13479]
 gi|288864882|gb|EFC97180.1| flagellar hook protein [Clostridium hathewayi DSM 13479]
          Length = 653

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E +DM  T R + AN + I  S  ++   ++L R
Sbjct: 611 EMSNVDISTEFSDMIVTQRGFQANSRIITVSDSILEELVNLKR 653



 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 5/47 (10%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGG 60
          +     ++ +I  NIAN  T G        R +    F + +  + G
Sbjct: 1  MKAHQTKLDVIGNNIANVNTYGFKSS----RARFQDVFYQTLQSAAG 43


>gi|12057219|gb|AAF14371.2|AF133240_5 flagellar proximal rod protein FlgF [Rhodobacter sphaeroides]
          Length = 251

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NVN + E     E  R +  NL+ I  + ++  +   LLR
Sbjct: 202 QGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKELDESGARLLR 248


>gi|196039148|ref|ZP_03106455.1| flagellar basal-body rod protein FlgB [Bacillus cereus NVH0597-99]
 gi|196030293|gb|EDX68893.1| flagellar basal-body rod protein FlgB [Bacillus cereus NVH0597-99]
          Length = 135

 Score = 45.3 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPGLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|330830303|ref|YP_004393255.1| flagellar hook protein FlgE [Aeromonas veronii B565]
 gi|328805439|gb|AEB50638.1| Flagellar hook protein FlgE [Aeromonas veronii B565]
          Length = 450

 Score = 45.3 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN ++++ +  +  T L +
Sbjct: 409 EQSNVDLTSELVDLITAQRNFQANSRSLEVNSSLQQTILQI 449



 Score = 36.8 bits (85), Expect = 0.91,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANART 34
          S + A SG+      + + + NIAN  T
Sbjct: 2  SFNNALSGVNAAQKDLNVTANNIANVNT 29


>gi|254496887|ref|ZP_05109735.1| flagellar hook protein FlgE [Legionella drancourtii LLAP12]
 gi|254353906|gb|EET12593.1| flagellar hook protein FlgE [Legionella drancourtii LLAP12]
          Length = 437

 Score = 45.3 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  D+    R + AN QTI+    +  T +++
Sbjct: 392 SGRLEESNVDITSELVDLIGAQRDFQANAQTIRAGDTITQTIINI 436



 Score = 33.4 bits (76), Expect = 9.7,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
                SGL   S  + +I  NIAN+ T G
Sbjct: 2  IFDTGISGLQAASNNLDVIGNNIANSSTVG 31


>gi|220934394|ref|YP_002513293.1| flagellar basal body FlaE domain protein [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995704|gb|ACL72306.1| flagellar basal body FlaE domain protein [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 408

 Score = 45.3 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +G ++  NV++  +   +    R + AN Q I  +  +  T +++
Sbjct: 362 QAGGLESSNVDIAEQLVKLITAQRNFQANAQVITTADAVTQTIINI 407



 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTG 36
             A SGL   SA +++   NIAN+ TTG
Sbjct: 3  FRTALSGLNAASADLRVTGNNIANSGTTG 31


>gi|163758009|ref|ZP_02165097.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
 gi|162284298|gb|EDQ34581.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
          Length = 241

 Score = 45.3 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVN ++E  ++   +R +       + + D+    +  L
Sbjct: 192 QGYIEDSNVNPILEMTNLIMVSRAFENTSAMTRATEDVFKEAIRTL 237



 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 7/63 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S ++A S       RM  +++N+ANA TTG       +R   I F EV+  +G   V
Sbjct: 1  MQGSLYVALSSQIALERRMNTLADNVANANTTG-------FRATEIKFNEVLADTGVANV 53

Query: 64 KKI 66
            +
Sbjct: 54 SFV 56


>gi|148258440|ref|YP_001243025.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
 gi|146410613|gb|ABQ39119.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
          Length = 466

 Score = 45.3 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G V+  N +V  E + +  T + Y AN++ +  S  MM+  L+ +R
Sbjct: 421 GNVEASNSDVAGEFSKLIATQQAYSANVKVMTTSQQMMSDLLNAIR 466


>gi|325111114|ref|YP_004272182.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
           5305]
 gi|324971382|gb|ADY62160.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
           5305]
          Length = 256

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++   V  + E   M E++R + AN+  I+   + +   L 
Sbjct: 208 QGFLEQSGVRPITEMLAMIESSRAFEANMNLIQNQDNTLGQLLQ 251



 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 14/74 (18%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          + +G  +QS R  +IS NIANA T+        ++R    F      +    +     D 
Sbjct: 8  SATGADLQSLRQDVISNNIANANTSS-------FKRDLAIFAVRPQQA---ELDGDLDDV 57

Query: 71 STFVEEFDPGHPVA 84
             +     GHP A
Sbjct: 58 PPPL----QGHPGA 67


>gi|238927475|ref|ZP_04659235.1| flagellar hook protein FlgE [Selenomonas flueggei ATCC 43531]
 gi|238884757|gb|EEQ48395.1| flagellar hook protein FlgE [Selenomonas flueggei ATCC 43531]
          Length = 680

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 18/79 (22%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          +I S   A SGL     RM ++  NIAN  TTG       ++   ++F +++  +     
Sbjct: 1  MIRSMFSAVSGLKGHQTRMDVVGNNIANVNTTG-------FKASRVTFADMISQNLSGAS 53

Query: 59 ------GGVRVKKIGVDQS 71
                GGV  K+IG+  S
Sbjct: 54 APNGTIGGVNPKQIGLGMS 72



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 25/43 (58%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  + +DM  T R + +N + I  S +M+ T +++ R
Sbjct: 638 EMSNVDLADQFSDMIITQRGFQSNSKMITVSDEMLETLINMKR 680


>gi|209963559|ref|YP_002296474.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
 gi|209957025|gb|ACI97661.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
          Length = 434

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   + ET R Y +N + I+ + +M+     L+R
Sbjct: 392 EASNVDIAEELTSIIETQRAYSSNAKIIQTADEMLDEVSRLMR 434



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 15/58 (25%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------HGSGGVR 62
          SGLA QSA+   IS+NI+N+ T G       Y+R  + F  ++        + +GGV+
Sbjct: 12 SGLAAQSAKFAAISDNISNSSTVG-------YKRSGVQFSTLVTSASSPGSYSAGGVQ 62


>gi|126738557|ref|ZP_01754262.1| flagellar hook protein FlgE, putative [Roseobacter sp. SK209-2-6]
 gi|126720356|gb|EBA17062.1| flagellar hook protein FlgE, putative [Roseobacter sp. SK209-2-6]
          Length = 446

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E  DM +T R Y +N + I+   +M+  T ++ R
Sbjct: 409 DVATELTDMIKTQRAYSSNAKVIQTVDEMLQETTNIKR 446



 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          + ++ +   SGL+  ++ +  IS+NIAN+ T G       Y+R    F+ ++ GS G
Sbjct: 16 ISSALNAGVSGLSANASSLAAISDNIANSSTRG-------YKRIQTDFQSMVVGSKG 65


>gi|15616299|ref|NP_244604.1| flagellar hook-basal body protein [Bacillus halodurans C-125]
 gi|10176361|dbj|BAB07456.1| flagellar hook-basal body protein [Bacillus halodurans C-125]
          Length = 280

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NV++  E  D+ ET R Y  N +++  +  MM
Sbjct: 234 QGTLEGSNVDIGREMTDLIETQRNYQFNARSVSMADQMM 272



 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 7/34 (20%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          +  +S NIAN+ TTG       Y+R+  SF +++
Sbjct: 19 LDTLSHNIANSNTTG-------YKRREASFSDLL 45


>gi|260429561|ref|ZP_05783538.1| flagellar hook protein FlgE [Citreicella sp. SE45]
 gi|260420184|gb|EEX13437.1| flagellar hook protein FlgE [Citreicella sp. SE45]
          Length = 431

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  E  DM  T R Y +N + I+   +M+  T ++ R
Sbjct: 394 DIARELTDMIRTQRAYSSNAKVIQTVDEMLQETTNIKR 431



 Score = 40.3 bits (94), Expect = 0.096,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 17/113 (15%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +S +   SGL+  ++R+  IS+NIAN+ T G       YRR    F  ++  S G R 
Sbjct: 3   ISSSLNAGVSGLSGNASRLAAISDNIANSSTYG-------YRRVETDFTALVMSS-GTRT 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPN-VNVLVETADMR--ETNRLYMA 113
              G      +   D G  +      V   N  ++ ++   M        Y A
Sbjct: 55  YTAGGTSVDNLRVVDQGGAL------VSTSNATDLAIDGIGMLPVVAVSQYEA 101


>gi|228964726|ref|ZP_04125833.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228794976|gb|EEM42475.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 152

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 37  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 89

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ +TN+LY  ++  I   + +
Sbjct: 90  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKTNQLYGISVNAINTQYAI 145

Query: 125 MTTT 128
               
Sbjct: 146 NQAA 149


>gi|13472570|ref|NP_104137.1| flagellar basal body rod protein FlgF [Mesorhizobium loti
          MAFF303099]
 gi|17366619|sp|Q98HE3|FLGF_RHILO RecName: Full=Flagellar basal-body rod protein flgF
 gi|14023316|dbj|BAB49923.1| flagellar basal-body rod protein; FlgF [Mesorhizobium loti
          MAFF303099]
          Length = 241

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 7/61 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S ++A S       R+  I++N+ANA T G       +R   + FE+++ G+G   V
Sbjct: 1  MQDSLYVALSAQMALERRLDTIADNVANANTVG-------FRATGVKFEDMVSGTGQKSV 53

Query: 64 K 64
           
Sbjct: 54 S 54



 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 19/47 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A G V+  NVN ++E   +    R +      ++Q+       +  L
Sbjct: 191 AQGFVEESNVNPVLEMTRLIMVQRAFENTAALMRQTASSSDEAIKTL 237


>gi|238796904|ref|ZP_04640408.1| Flagellar basal body FlaE domain protein [Yersinia mollaretii ATCC
           43969]
 gi|238719164|gb|EEQ10976.1| Flagellar basal body FlaE domain protein [Yersinia mollaretii ATCC
           43969]
          Length = 407

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV++  E  +M    R Y +N QTIK   +++    +L 
Sbjct: 366 EASNVDLSKEMVNMIVYQRNYQSNSQTIKTQSELLQILANLG 407



 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 10/66 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIGVD 69
          SGL   S  + ++  NIAN++T G   GS       I+F +V  GS    GV+V  +  +
Sbjct: 8  SGLNAASQALDVVGNNIANSQTVGFKSGS-------IAFADVFAGSQVGMGVQVSSVNQN 60

Query: 70 QSTFVE 75
           S  V 
Sbjct: 61 FSDGVL 66


>gi|307945688|ref|ZP_07661024.1| flagellar basal body FlaE domain protein [Roseibium sp.
          TrichSKD4]
 gi|307771561|gb|EFO30786.1| flagellar basal body FlaE domain protein [Roseibium sp.
          TrichSKD4]
          Length = 459

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 7/63 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SGL  QS  ++ IS N+AN++TTG       Y+R   +F +++ G G  + 
Sbjct: 3  IYGAINSAVSGLTAQSRALENISGNVANSQTTG-------YKRLDTTFADLVSGGGSRQA 55

Query: 64 KKI 66
           ++
Sbjct: 56 TQV 58



 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 25/44 (56%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  N ++  E + +  T + Y AN + +  + +M+ + L+++R
Sbjct: 416 VELSNADIATEFSKLIVTQQAYSANSRIVTSADEMLDSALNMVR 459


>gi|83647172|ref|YP_435607.1| flagellar basal body rod protein FlgF [Hahella chejuensis KCTC
           2396]
 gi|83635215|gb|ABC31182.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
          Length = 248

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NVN + E  ++   +R +   ++ ++ + D       LL+
Sbjct: 199 ESGYLESSNVNAVEEMTEILSLSRQFELQVKVMRAADDNSEAAARLLQ 246


>gi|85715030|ref|ZP_01046015.1| hypothetical protein NB311A_11677 [Nitrobacter sp. Nb-311A]
 gi|85698227|gb|EAQ36099.1| hypothetical protein NB311A_11677 [Nitrobacter sp. Nb-311A]
          Length = 620

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L ++  IA SGL    A + I+S N+ANA T G       Y  +T+  ++++ GS G  V
Sbjct: 3  LSSALSIAMSGLRANQAALSIVSGNVANANTPG-------YVAQTLVQDQIVTGSTGSGV 55

Query: 64 KKIGVDQS 71
          + IGV ++
Sbjct: 56 RIIGVSRT 63



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           VN+  E A++      Y AN   +     MM T L 
Sbjct: 584 VNMDTEMANLIALQNSYAANAHVMTVVQSMMQTLLQ 619


>gi|86136709|ref|ZP_01055287.1| flagellar hook protein FlgE, putative [Roseobacter sp. MED193]
 gi|85826033|gb|EAQ46230.1| flagellar hook protein FlgE, putative [Roseobacter sp. MED193]
          Length = 388

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E  DM +T R Y +N + I+   +M+  T ++ R
Sbjct: 351 DVATELTDMIKTQRAYSSNAKVIQTVDEMLQETTNIKR 388


>gi|269836598|ref|YP_003318826.1| hypothetical protein Sthe_0566 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785861|gb|ACZ38004.1| protein of unknown function DUF1078 domain protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 247

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           + G V+  NV++     +M E +R Y    + ++ S   + T + ++ R
Sbjct: 196 SQGFVEQSNVDLAQSMVEMLEASRSYALAQRMLQVSDATLGTAVNEIGR 244


>gi|254456854|ref|ZP_05070282.1| conserved domain protein [Campylobacterales bacterium GD 1]
 gi|207085646|gb|EDZ62930.1| conserved domain protein [Campylobacterales bacterium GD 1]
          Length = 419

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV +     D+    R Y AN ++I  +  MM   L +
Sbjct: 375 HLEGSNVQMTTGLTDLIIFQRAYDANSKSITTADQMMQKALQM 417


>gi|239828563|ref|YP_002951187.1| flagellar basal body rod protein [Geobacillus sp. WCH70]
 gi|239808856|gb|ACS25921.1| flagellar basal body rod protein [Geobacillus sp. WCH70]
          Length = 278

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
             G ++  NV++     +M    R + AN + ++     M     ++ R
Sbjct: 228 KQGFLERANVDLNRAMTEMLSAYRAFEANQKIVQAYDRSMDKAVNEIGR 276



 Score = 41.5 bits (97), Expect = 0.046,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A SG+  Q  R+++ + NIANA T G        R 
Sbjct: 1  MLRGFYTAASGMMAQQRRIEMWTNNIANANTPGYKSDQAALRA 43


>gi|170755952|ref|YP_001782255.1| flagellar basal body rod protein FlgG [Clostridium botulinum B1
           str. Okra]
 gi|169121164|gb|ACA45000.1| flagellar basal body rod protein [Clostridium botulinum B1 str.
           Okra]
          Length = 255

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 80  GHPVANASGIVK-----YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +P  N +GIV+       NVNV  E  +M  T R +  N + ++   + +  T++
Sbjct: 195 NNPQ-NINGIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQKIVQSIDETLGKTVN 249


>gi|163802602|ref|ZP_02196494.1| flagellar L-ring protein precursor H [Vibrio sp. AND4]
 gi|159173685|gb|EDP58504.1| flagellar L-ring protein precursor H [Vibrio sp. AND4]
          Length = 249

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 30/62 (48%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           T  + ++    ++  +G ++  NVN + E   + +  R +   ++ +  + +M  ++  L
Sbjct: 186 TPNQPYEVDGSISIQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEEMDKSSDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|289666044|ref|ZP_06487625.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
          vasculorum NCPPB702]
 gi|289670503|ref|ZP_06491578.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
          musacearum NCPPB4381]
          Length = 133

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 7/59 (11%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
              +   +    LA++  RM++I+ N++N  T G       Y+ K ++FE  +  + G
Sbjct: 3  SPFSSFLGVHGDALALREQRMKLIASNLSNVDTPG-------YKAKDLNFEAALKSAQG 54


>gi|228984827|ref|ZP_04144999.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228775025|gb|EEM23419.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 135

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|197120116|ref|YP_002140543.1| flagellar hook-associated protein FlgK [Geobacter bemidjiensis
          Bem]
 gi|197089476|gb|ACH40747.1| flagellar hook-associated protein FlgK [Geobacter bemidjiensis
          Bem]
          Length = 482

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 7/46 (15%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
            IA+SG+  Q   +++  ENIAN  T G       Y R+ +  E 
Sbjct: 7  FDIASSGVTAQRLAIEVTGENIANVNTDG-------YSRQQVIMEN 45


>gi|56421866|ref|YP_149184.1| flagellar hook-basal body protein [Geobacillus kaustophilus
          HTA426]
 gi|56381708|dbj|BAD77616.1| flagellar hook-basal body protein [Geobacillus kaustophilus
          HTA426]
          Length = 273

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 11/69 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A + +     R+  IS NIAN+ T G       ++R+  SF E++      ++
Sbjct: 1  MLRSMLTAANTMNALQQRLDTISHNIANSNTVG-------FKRREASFAELLTQ----QI 49

Query: 64 KKIGVDQST 72
           ++  D++ 
Sbjct: 50 DRLPNDEAP 58



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  E   +  T+R Y  N + +  S  M+
Sbjct: 225 KQGALEQANVDLGEEMVGLMATSRAYQLNARAVSISEQML 264


>gi|310659663|ref|YP_003937384.1| flagellar basal body rod protein [Clostridium sticklandii DSM 519]
 gi|308826441|emb|CBH22479.1| putative Flagellar basal body rod protein [Clostridium sticklandii]
          Length = 372

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NV+++ E A+M    R Y +  + I+   D+M+  
Sbjct: 324 QGYLEGSNVDIISEMAEMINLLRGYESGQKVIRSYDDIMSKA 365



 Score = 40.7 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 9/82 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    + A +G+   S R+ +I+ NIAN++TT          +K +   E       V++
Sbjct: 1  MFRGIYTATNGMRTDSKRIDVITSNIANSQTTA--------FKKDVLVTESFPEQLMVKL 52

Query: 64 KKIGVDQSTFVEEFDPGHPVAN 85
            +  +     +  +   P A+
Sbjct: 53 NGVENNLRPTRQLVN-VDPPAD 73


>gi|260774938|ref|ZP_05883839.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609193|gb|EEX35351.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450]
          Length = 434

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +SG+++  N+++  E  D+    R + AN ++++  +      L +
Sbjct: 388 SSGVLEQANIDMTQELVDLISAQRNFQANSRSLEVHNQTQQNILQI 433



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +A SGL+     +   S NIANA T G         D Y     +  +   G  GV+  K
Sbjct: 4  VALSGLSAAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLFTHAKTTPGQ-GVQAAK 62

Query: 66 IGVDQSTFVEEFDPGHPV 83
          +          +   +P+
Sbjct: 63 VAQQFHEGSSIY-TNNPM 79


>gi|229029423|ref|ZP_04185506.1| Flagellar basal-body rod protein [Bacillus cereus AH1271]
 gi|228731882|gb|EEL82781.1| Flagellar basal-body rod protein [Bacillus cereus AH1271]
          Length = 135

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 31/125 (24%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG-- 80
             +S NIANA T G       Y+ + ++F E M+ S  V  K    D ++  + +     
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSS-VLYKSNAADLNSNPDLYQTNEM 71

Query: 81  --------HPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                   +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + 
Sbjct: 72  HLPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGVSINAINTQYA 127

Query: 124 MMTTT 128
           +    
Sbjct: 128 INQAA 132


>gi|227820855|ref|YP_002824825.1| flagellar basal body rod protein FlgB [Sinorhizobium fredii NGR234]
 gi|227339854|gb|ACP24072.1| putative flagellar basal-body rod protein FlgB [Sinorhizobium
           fredii NGR234]
          Length = 126

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 48/143 (33%), Gaps = 31/143 (21%)

Query: 1   MDYLIASAHIANSGLAVQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHG 57
           MD +     +A+     Q  + R  +++ NIANA T         YR K +  FE V+  
Sbjct: 1   MDPI-QLFELASR--QAQWLTVRQNVVAGNIANANTPH-------YRAKDVQPFESVLQN 50

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN----------VNVLVETADMRET 107
           +G        V  +          P A     V   +          V +  E     E 
Sbjct: 51  TG--------VQMAATHRAHFTESPDAAQVTDVGMIDDVAVQQSGNTVALEQEMMKTGEI 102

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y  N   +K  H MM  T+ 
Sbjct: 103 KRDYELNSGLVKSFHRMMLMTVR 125


>gi|145297460|ref|YP_001140301.1| lateral flagellar hook-associated protein [Aeromonas salmonicida
          subsp. salmonicida A449]
 gi|142850232|gb|ABO88553.1| lateral flagellar hook-associated protein [Aeromonas salmonicida
          subsp. salmonicida A449]
          Length = 439

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 12/69 (17%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-----MHGSG 59
          ++  +I  SGL      + + ++NIAN  T G       Y R+      +     +    
Sbjct: 1  MSMLNIGLSGLNAAQIALNVTAQNIANVNTIG-------YSRQEAMMGSLSGFGRLDNGM 53

Query: 60 GVRVKKIGV 68
          GV V  +  
Sbjct: 54 GVEVTGVRR 62



 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E   +    + Y AN + I  S  +  + L++
Sbjct: 400 SGVNTDEEGVKIMAYTKAYQANAKVISTSDQLFNSILNM 438


>gi|50120639|ref|YP_049806.1| flagellar hook protein FlgE [Pectobacterium atrosepticum SCRI1043]
 gi|49611165|emb|CAG74611.1| flagellar hook protein [Pectobacterium atrosepticum SCRI1043]
          Length = 405

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E   M    R Y +N QTIK    ++ T + L
Sbjct: 366 SNVDLSKELVSMIVAQRNYQSNAQTIKTQDSILQTLVSL 404



 Score = 43.0 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SGL   S  + +I  NIAN+ T G   G+       ++F ++  GS    GV+V  + 
Sbjct: 6  AVSGLNAASNNLDVIGNNIANSATVGFKSGN-------VTFADMFAGSKVGMGVKVASVL 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|328470107|gb|EGF41018.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          10329]
          Length = 457

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 16/90 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GV 61
          +IA SGL      + + ++N+A+  T G       Y R+      V  G         GV
Sbjct: 5  NIALSGLNANRVALDVTAQNVASVNTPG-------YSRQQALMATVGDGKSNRLSSGMGV 57

Query: 62 RVKKIGVDQSTF--VEEFDPGHPVANASGI 89
           V  I      F   + +      A A+G 
Sbjct: 58 EVTSIRRVTDQFLVKQTWSTNSLAAYAAGY 87


>gi|83955137|ref|ZP_00963793.1| Flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
 gi|83840466|gb|EAP79639.1| Flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
          Length = 259

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             G ++  NVN ++E   + +  R Y  +++ +    D+  T +  L R
Sbjct: 210 KQGFIEGSNVNAVLEMTRLIDIQRAYENSVKLMGSDDDLTRTAIQKLGR 258



 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 7/58 (12%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          D +   +++A S   V +  M   + N+ANA T+G       Y+      E +  GSG
Sbjct: 15 DEMTNISYVALSQATVLTRNMDTTAHNLANATTSG-------YKAIHPVLESIPDGSG 65


>gi|166712065|ref|ZP_02243272.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
          oryzicola BLS256]
          Length = 133

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 7/59 (11%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
              +   +    LA++  RM++I+ N++N  T G       Y+ K ++FE  +  + G
Sbjct: 3  SPFSSFLGVHGDALALREQRMKLIASNLSNVDTPG-------YKAKDLNFEAALKSAQG 54


>gi|303326942|ref|ZP_07357384.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3]
 gi|302862930|gb|EFL85862.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3]
          Length = 817

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   M  T R + AN + I     M+ T + + R
Sbjct: 774 IEQSNVDMSREFVQMITTQRGFQANSKGITTVDTMLETVIGMKR 817



 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          L AS   + SGL     +M ++  NIAN  T G
Sbjct: 3  LSASMWTSVSGLLAHGNKMNLVGNNIANVSTIG 35


>gi|297531534|ref|YP_003672809.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
 gi|297254786|gb|ADI28232.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
          Length = 273

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  E   +  T+R Y  N + I  S  M+
Sbjct: 225 KQGALEQSNVDLGEEMVGLMATSRAYQLNARAISISEQML 264



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 11/69 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A + +     R+  IS NIAN+ T G       ++R+  SF E++      ++
Sbjct: 1  MLRSMLTAANTMNALQERLDTISHNIANSNTVG-------FKRREASFAELLTQ----QI 49

Query: 64 KKIGVDQST 72
           ++  D++ 
Sbjct: 50 DRLPNDEAP 58


>gi|292669735|ref|ZP_06603161.1| flagellar basal-body rod protein FlgB [Selenomonas noxia ATCC
          43541]
 gi|292648532|gb|EFF66504.1| flagellar basal-body rod protein FlgB [Selenomonas noxia ATCC
          43541]
          Length = 140

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 9/55 (16%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-RRKTISFEEVMHGSGG 60
          +  I +  +A  S R +++S NIAN  T        PY RR  + FE+++    G
Sbjct: 10 TIDIGSRAMAAASLRHEVLSNNIANVNT--------PYFRRSHVRFEDLLKQELG 56


>gi|196045109|ref|ZP_03112342.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB108]
 gi|218902858|ref|YP_002450692.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH820]
 gi|228945346|ref|ZP_04107701.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|300117338|ref|ZP_07055128.1| flagellar basal body rod protein FlgB [Bacillus cereus SJ1]
 gi|301053280|ref|YP_003791491.1| flagellar basal body rod protein [Bacillus anthracis CI]
 gi|196024111|gb|EDX62785.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB108]
 gi|218535408|gb|ACK87806.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH820]
 gi|228814318|gb|EEM60584.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|298725173|gb|EFI65825.1| flagellar basal body rod protein FlgB [Bacillus cereus SJ1]
 gi|300375449|gb|ADK04353.1| flagellar basal body rod protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 135

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|32266906|ref|NP_860938.1| flagellar basal body rod protein FlgB [Helicobacter hepaticus ATCC
           51449]
 gi|32262958|gb|AAP78004.1| flagellar basal body rod protein FlgB [Helicobacter hepaticus ATCC
           51449]
          Length = 144

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 35/137 (25%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---------------------G 57
           S R  +I+ N+AN  T         YR K ++FE+ +                       
Sbjct: 21  SIRQDMIASNLANVDT-------PFYRPKDVNFEQYLSRENKKIFGTAPRSYKLELAKTS 73

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           S  +  ++I  D +T          +A   G     +V++ VET++M + + +Y A    
Sbjct: 74  SKHLDTRRIDKDTATMFWR---DGHLAKNDGN----SVDLDVETSEMGKNSTMYQALTSA 126

Query: 118 IKQSHDMMTTTLDLLRD 134
           +K+   +    +D  R+
Sbjct: 127 LKRHKGIFAYAMDSGRN 143


>gi|260466625|ref|ZP_05812813.1| flagellar basal-body rod protein FlgF [Mesorhizobium
          opportunistum WSM2075]
 gi|259029631|gb|EEW30919.1| flagellar basal-body rod protein FlgF [Mesorhizobium
          opportunistum WSM2075]
          Length = 240

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 7/61 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S ++A S       R+  I++N+ANA T G       +R   + FE+V+ G+G   V
Sbjct: 1  MRDSLYVALSAQMALERRLDTIADNVANANTVG-------FRATGVKFEDVVSGTGQKSV 53

Query: 64 K 64
           
Sbjct: 54 S 54



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 19/47 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A G V+  NVN ++E   +    R +      ++Q+       +  L
Sbjct: 191 AQGFVEESNVNPVLEMTRLIMVQRAFENTAALMRQTDSSTDEAIKTL 237


>gi|258514025|ref|YP_003190247.1| flagellar basal-body rod protein FlgF [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777730|gb|ACV61624.1| flagellar basal-body rod protein FlgF [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 255

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV ++ E  D+   +R Y  + + ++   +++   ++
Sbjct: 205 KQGFLEKSNVELVNEMTDIIAVSRAYETSQKLMQVQDELLGKAVN 249


>gi|148380596|ref|YP_001255137.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC
           3502]
 gi|153932501|ref|YP_001384883.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str.
           ATCC 19397]
 gi|153936688|ref|YP_001388352.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str.
           Hall]
 gi|153938096|ref|YP_001391939.1| flagellar basal body rod protein FlgG [Clostridium botulinum F str.
           Langeland]
 gi|148290080|emb|CAL84199.1| putative flagellar basal-body rod protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152928545|gb|ABS34045.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152932602|gb|ABS38101.1| flagellar basal body rod protein [Clostridium botulinum A str.
           Hall]
 gi|152933992|gb|ABS39490.1| flagellar basal body rod protein [Clostridium botulinum F str.
           Langeland]
 gi|295319959|gb|ADG00337.1| flagellar basal body rod protein [Clostridium botulinum F str.
           230613]
 gi|322806968|emb|CBZ04538.1| flagellar basal-body rod protein FlgF [Clostridium botulinum H04402
           065]
          Length = 255

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 80  GHPVANASGIVK-----YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +P  N +GIV+       NVNV  E  +M  T R +  N + ++   + +  T++
Sbjct: 195 NNPQ-NINGIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQKIVQSIDETLGKTVN 249


>gi|294084417|ref|YP_003551175.1| flagellar proximal rod protein FlgF [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663990|gb|ADE39091.1| flagellar proximal rod protein FlgF [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 251

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NVN+  E  +  E  R Y  N++ I  + ++   T  L+R
Sbjct: 205 VELSNVNITEELVNSIEDQRQYEINIKLISTAQELDEGTSSLMR 248


>gi|313895777|ref|ZP_07829331.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320529388|ref|ZP_08030476.1| flagellar basal-body rod protein FlgB [Selenomonas artemidis F0399]
 gi|312975202|gb|EFR40663.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320138354|gb|EFW30248.1| flagellar basal-body rod protein FlgB [Selenomonas artemidis F0399]
          Length = 140

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 26/111 (23%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           ++  I +  LA  S R +++S NIAN  T         +RR  + FE+++    G     
Sbjct: 9   STLDIGSRALAAASLRHEVLSNNIANVNTPN-------FRRSHVRFEDLLQKELG----- 56

Query: 66  IGVDQS-TFVEEFDPGHPVA---NASGIVK----------YPNVNVLVETA 102
           +  D     V   D   P+A    A G+++            NV++ +E A
Sbjct: 57  LAEDPLMKVVRTHDRHFPLAFRGKAHGVIEQDSTTNMRLDGNNVDIDIEMA 107


>gi|326791546|ref|YP_004309367.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum DSM
           5427]
 gi|326542310|gb|ADZ84169.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum DSM
           5427]
          Length = 122

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 22/136 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------G 57
           + +   + N+ ++    R  IISENI+N  T G       Y+RK + FE ++       G
Sbjct: 3   IFSDIDLMNTAISATMLRKGIISENISNVDTPG-------YKRKDVRFETILEKEIKKGG 55

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + G+ +K I   +     ++      AN+S  +   NV++ VE A+  + +  Y A +  
Sbjct: 56  TAGLNLKDI---EPEIYTDY------ANSSYRLDGNNVDIDVEMAEEAKVSARYNALVTR 106

Query: 118 IKQSHDMMTTTLDLLR 133
           +       +T L  L+
Sbjct: 107 VNSQLGRFSTVLQNLK 122


>gi|322421663|ref|YP_004200886.1| flagellar basal-body rod protein FlgF [Geobacter sp. M18]
 gi|320128050|gb|ADW15610.1| flagellar basal-body rod protein FlgF [Geobacter sp. M18]
          Length = 238

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 8/41 (19%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          L+ Q  R+ +IS N+ANA TTG       ++   I FE ++
Sbjct: 13 LSAQR-RLDVISNNLANASTTG-------FKADQIQFESIL 45



 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 9/66 (13%)

Query: 77  FDPGHP--------VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM-MTT 127
           + P +P             G ++  NV V+VE A M E +R +    + +K   D+    
Sbjct: 172 YLPANPQTATTASTAGVKQGYLESSNVKVVVEMARMIEASRYFEICAKAVKTYDDLNARA 231

Query: 128 TLDLLR 133
             DL +
Sbjct: 232 ANDLGK 237


>gi|213421609|ref|ZP_03354675.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 147

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +G ++  NV++  E  +M    R Y +N QTIK    ++
Sbjct: 109 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 147


>gi|170758901|ref|YP_001787959.1| flagellar basal body rod protein FlgG [Clostridium botulinum A3
           str. Loch Maree]
 gi|169405890|gb|ACA54301.1| flagellar basal body rod protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 255

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 80  GHPVANASGIVK-----YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +P  N +GIV+       NVNV  E  +M  T R +  N + ++   + +  T++
Sbjct: 195 NNPQ-NINGIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQKIVQSIDETLGKTVN 249


>gi|168182722|ref|ZP_02617386.1| flagellar basal body rod protein [Clostridium botulinum Bf]
 gi|237796078|ref|YP_002863630.1| flagellar basal body rod protein FlgG [Clostridium botulinum Ba4
           str. 657]
 gi|182674102|gb|EDT86063.1| flagellar basal body rod protein [Clostridium botulinum Bf]
 gi|229264182|gb|ACQ55215.1| flagellar basal body rod protein [Clostridium botulinum Ba4 str.
           657]
          Length = 255

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 80  GHPVANASGIVK-----YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +P  N +GIV+       NVNV  E  +M  T R +  N + ++   + +  T++
Sbjct: 195 NNPQ-NINGIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQKIVQSIDETLGKTVN 249


>gi|145298491|ref|YP_001141332.1| flagellar hook protein FlgE [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851263|gb|ABO89584.1| flagellar hook protein FlgE [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 446

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  +  ++    R + AN ++++ +  +  T L +
Sbjct: 404 VEQSNVDLTSQLVNLITAQRNFQANSRSLEVNSSLQQTILQI 445



 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANART 34
          S + A SG+      + + + NIAN  T
Sbjct: 2  SFNNALSGVNAAQKDLNVTANNIANVNT 29


>gi|58582192|ref|YP_201208.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
          oryzae KACC10331]
 gi|84624085|ref|YP_451457.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
          oryzae MAFF 311018]
 gi|58426786|gb|AAW75823.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84368025|dbj|BAE69183.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 132

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 7/59 (11%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
              +   +    LA++  RM++I+ N++N  T G       Y+ K ++FE  +  + G
Sbjct: 3  SPFSSFLGVHGDALALREQRMKLIASNLSNVDTPG-------YKAKDLNFEAALKSAQG 54


>gi|148256818|ref|YP_001241403.1| putative flagellar hook protein flgE [Bradyrhizobium sp. BTAi1]
 gi|146408991|gb|ABQ37497.1| putative Flagellar hook protein flgE [Bradyrhizobium sp. BTAi1]
          Length = 601

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  + + + SGL+ QS  +Q IS NIANA T G
Sbjct: 3  IFDAMNTSVSGLSAQSFALQNISGNIANASTVG 35



 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  N ++  E   +  T + Y AN + I  ++ M+   L++LR
Sbjct: 556 GSLEGSNTDIADEFTKLIVTQQAYSANTKVITTANSMVQDLLNVLR 601


>gi|302185583|ref|ZP_07262256.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae 642]
          Length = 445

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P +   G V        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 388 GAPQSGTLGYVTGQALEESNVDLTLELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 444



 Score = 37.2 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|261420740|ref|YP_003254422.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|319768410|ref|YP_004133911.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
 gi|261377197|gb|ACX79940.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|317113276|gb|ADU95768.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
          Length = 273

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  E   +  T+R Y  N + I  S  M+
Sbjct: 225 KQGALEQSNVDLGEEMVGLMATSRAYQLNARAISISEQML 264



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 11/69 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A + +     R+  IS NIAN+ T G       ++R+  SF E++      ++
Sbjct: 1  MLRSMLTAANTMNALQERLDTISHNIANSNTVG-------FKRREASFAELLTQ----QI 49

Query: 64 KKIGVDQST 72
           ++  D++ 
Sbjct: 50 DRLPNDEAP 58


>gi|88858143|ref|ZP_01132785.1| flagellar hook protein [Pseudoalteromonas tunicata D2]
 gi|88819760|gb|EAR29573.1| flagellar hook protein [Pseudoalteromonas tunicata D2]
          Length = 492

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NVN+  E  D+    R + AN + ++ ++ +    L +
Sbjct: 447 SGTLEQANVNLTGELVDLIAAQRNFQANSRALEVNNQISQNILQI 491



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +IA SGL      + + + NIAN  T G
Sbjct: 2  SFNIALSGLKAAQKDLDVTANNIANVNTYG 31


>gi|83944163|ref|ZP_00956619.1| Flagellar basal body rod protein [Sulfitobacter sp. EE-36]
 gi|83845030|gb|EAP82911.1| Flagellar basal body rod protein [Sulfitobacter sp. EE-36]
          Length = 259

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             G ++  NVN ++E   + +  R Y  +++ +    D+  T +  L R
Sbjct: 210 KQGFIEGSNVNAVLEMTRLIDIQRAYENSVKLMGSDDDLTRTAIQKLGR 258



 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 7/58 (12%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          D +   +++A S     +  M   + N+ANA T+G       Y+      E V  GSG
Sbjct: 15 DEMSNISYVALSQATALTRSMDTTAHNLANATTSG-------YKAIHPVLESVPDGSG 65


>gi|222095367|ref|YP_002529427.1| flagellar basal body rod protein flgb [Bacillus cereus Q1]
 gi|221239425|gb|ACM12135.1| flagellar basal-body rod protein FlgB [Bacillus cereus Q1]
          Length = 172

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 31/125 (24%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG-- 80
             +S NIANA T G       Y+ + ++F E M+ S  +  K    D  T  + +     
Sbjct: 57  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALY-KSNTADLKTNADLYQTNEM 108

Query: 81  --------HPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                   +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + 
Sbjct: 109 HLPTVNAKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYA 164

Query: 124 MMTTT 128
           +    
Sbjct: 165 INQAA 169


>gi|241589577|ref|YP_002979602.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
 gi|240868289|gb|ACS65948.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
          Length = 641

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +  +I  SGL      +Q+I  NIAN  T G       Y R+ +   E     GGV    
Sbjct: 4  SLLNIGASGLRTAGIHLQVIGSNIANVNTPG-------YSRQEVVQTENPPHYGGVGDLG 56

Query: 66 IGVDQSTFVEEFDP 79
           G + +T    +D 
Sbjct: 57 QGANVATVKRIYDQ 70



 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E   + +  + Y A+ + ++ ++ +  T L +
Sbjct: 600 SGVNLDEEAMKLMQYQKAYQASAKVMQTANSLFDTLLSM 638


>gi|146341930|ref|YP_001206978.1| putative flagellar hook protein flgE [Bradyrhizobium sp. ORS278]
 gi|146194736|emb|CAL78761.1| putative Flagellar hook protein flgE [Bradyrhizobium sp. ORS278]
          Length = 601

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  + + + SGL+ QS  +Q IS NIANA T G
Sbjct: 3  IFDAMNTSVSGLSAQSFALQNISGNIANASTVG 35



 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  N ++  E   +  T + Y AN + I  ++ M+   L++LR
Sbjct: 556 GSLEGSNTDIADEFTKLIVTQQAYSANTKVITTANSMVQDLLNVLR 601


>gi|291538503|emb|CBL11614.1| fagellar hook-basal body proteins [Roseburia intestinalis XB6B4]
          Length = 547

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E   M  T R + AN + I  S  ++   ++L R
Sbjct: 501 SGELEMSNVDLSTEFTQMIITQRGFQANSRIITTSDTLLEELVNLKR 547



 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 20/70 (28%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------------G 57
          A SGL     +M +I  NIAN  T         ++  ++ F++V++             G
Sbjct: 4  AVSGLKTHQTKMDVIGNNIANVNTVA-------FKSSSVVFQDVLYQMTSNASGANAATG 56

Query: 58 SGGVRVKKIG 67
          +GGV  K+IG
Sbjct: 57 TGGVNAKQIG 66


>gi|88704306|ref|ZP_01102020.1| Flagellar hook protein FlgE [Congregibacter litoralis KT71]
 gi|88701357|gb|EAQ98462.1| Flagellar hook protein FlgE [Congregibacter litoralis KT71]
          Length = 429

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV +  E  D+    R + AN Q I+    +  T ++L
Sbjct: 390 SNVEITQELVDLIVAQRNFQANAQVIQAEDAITQTVINL 428



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          +   A SG+   +A + ++S NIANA TTG       ++     F +V 
Sbjct: 2  AFSTAISGINAATADLGVVSNNIANASTTG-------FKASRAEFADVY 43


>gi|253681928|ref|ZP_04862725.1| flagellar hook-associated protein FlgK [Clostridium botulinum D
          str. 1873]
 gi|253561640|gb|EES91092.1| flagellar hook-associated protein FlgK [Clostridium botulinum D
          str. 1873]
          Length = 686

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L A+ ++   GL  Q   + + S NIAN+ T G       Y R+    E  
Sbjct: 1  MSGLFATLNVGKRGLYAQQGALDVTSHNIANSNTEG-------YTRQRAIMETT 47



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ +    Y AN + I  +  ++   ++ L+
Sbjct: 645 SGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGLK 685


>gi|153953775|ref|YP_001394540.1| flagellar basal body rod protein FlgB [Clostridium kluyveri DSM
           555]
 gi|219854391|ref|YP_002471513.1| hypothetical protein CKR_1048 [Clostridium kluyveri NBRC 12016]
 gi|146346656|gb|EDK33192.1| FlgB [Clostridium kluyveri DSM 555]
 gi|219568115|dbj|BAH06099.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 133

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 20/119 (16%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGVRVKK 65
           GL   S R + IS+N+AN  T G       Y+RK ++FEE +  S           +  K
Sbjct: 19  GLDAASERSKAISDNLANVNTAG-------YKRKYVTFEESLKDSVYNLELKTDDEKHIK 71

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           IG +      + D  + +    G     NV++  E  +      +Y A +  +     M
Sbjct: 72  IGSNYGQIETKTDSSNSM-REDGN----NVDMDTEIVNQAANTLMYSALVNQMNSRLSM 125


>gi|11386807|sp|P57422|FLGE_BUCAI RecName: Full=Flagellar hook protein flgE
 gi|25403598|pir||E84969 flagellar hook protein flgE [imported] - Buchnera sp.  (strain APS)
 gi|10039011|dbj|BAB13045.1| flagellar hook protein flgE [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 405

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N Q+ K    ++ T ++L
Sbjct: 366 SNVDLNKELINMIIAQRNYQSNAQSFKTEDKIINTLINL 404



 Score = 40.7 bits (95), Expect = 0.076,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 7/42 (16%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          IA SGL   +  M+IIS NIANA T G       Y+ +   F
Sbjct: 2  IAISGLLANNDYMEIISNNIANASTIG-------YKSRKPLF 36


>gi|226950051|ref|YP_002805142.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|226842618|gb|ACO85284.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 255

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 80  GHPVANASGIVK-----YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +P  N +GIV+       NVNV  E  +M  T R +  N + ++   + +  T++
Sbjct: 195 NNPQ-NINGIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQKIVQSIDETLGKTVN 249


>gi|212709492|ref|ZP_03317620.1| hypothetical protein PROVALCAL_00534 [Providencia alcalifaciens DSM
           30120]
 gi|212687830|gb|EEB47358.1| hypothetical protein PROVALCAL_00534 [Providencia alcalifaciens DSM
           30120]
          Length = 422

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E   M    R Y +N QTIK    M+ T ++L
Sbjct: 377 SGALESSNVDMSQELISMIVMQRNYQSNAQTIKTQDQMLQTLVNL 421



 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   SA +  I  NIAN+ T G       ++  T SF ++  GSG   GV V
Sbjct: 2  SFSQAVSGLNAASAGLDSIGNNIANSATNG-------FKGATTSFADMFAGSGVGLGVNV 54

Query: 64 KKIGV 68
            +  
Sbjct: 55 AAVTQ 59


>gi|163738039|ref|ZP_02145455.1| S-adenosyl-L-homocysteine hydrolase [Phaeobacter gallaeciensis
           BS107]
 gi|161388655|gb|EDQ13008.1| S-adenosyl-L-homocysteine hydrolase [Phaeobacter gallaeciensis
           BS107]
          Length = 440

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 81  HPVANASGIVKY-PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            P  +  G  +     +V  E  +M +T R Y +N + I+   +M+  T ++ R
Sbjct: 387 GPTGDILGYAREESATDVAGELTNMIQTQRAYSSNAKVIQTVDEMLQETTNIKR 440



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 30/138 (21%)

Query: 7   SAHIANS------GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------ 54
           S  I++S      GL+  ++R+  IS+NIANA     TPG   Y+R    F  +      
Sbjct: 7   SMTISSSLNAGVAGLSANASRLASISDNIANA----STPG---YKRVQTDFHSMVMSSSG 59

Query: 55  -MHGSGGVRVKKI--GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV------ETADMR 105
             + +GGVR   +    ++   V   +         G++   ++N +       +   M 
Sbjct: 60  GAYSAGGVRTTNVRLIDERGPLVTTSNATDLAVRGRGMLPVASINEVETGATNPQM--ML 117

Query: 106 ETNRLYMANLQTIKQSHD 123
            T   +  N   +  +  
Sbjct: 118 TTTASFRTNADGLLATES 135


>gi|296103611|ref|YP_003613757.1| Flagellar basal body FlaE domain protein [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
 gi|295058070|gb|ADF62808.1| Flagellar basal body FlaE domain protein [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
          Length = 399

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 7/58 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          SGL+  +  + ++  NIAN++T G       ++  ++SF ++  GS G+ V+  GV Q
Sbjct: 8  SGLSAAAKALDVVGNNIANSQTVG-------FKAGSVSFADIFAGSTGMGVQVAGVSQ 58



 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 25/43 (58%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +++  NVN+  E  +M    R Y +N QTIK   +++ T ++L
Sbjct: 356 MLESSNVNLGDEMVNMIVYQRNYQSNSQTIKTQSEVLQTLVNL 398


>gi|148259130|ref|YP_001233257.1| flagellar hook protein FlgE [Acidiphilium cryptum JF-5]
 gi|146400811|gb|ABQ29338.1| flagellar basal body FlaE domain protein [Acidiphilium cryptum
           JF-5]
          Length = 425

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 28/47 (59%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G V+  NV++  +  D+    + Y AN + +  +  ++TTT+++++
Sbjct: 379 TGSVENSNVDIATQFTDLINAQQAYTANTKVVTAAQQILTTTVNMVQ 425



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  +   + SGL  QS+    IS+NIAN++T G
Sbjct: 3  IFGALDTSVSGLQAQSSAFTNISDNIANSQTIG 35


>gi|52785608|ref|YP_091437.1| flagellar basal body rod protein FlgG [Bacillus licheniformis ATCC
           14580]
 gi|163119437|ref|YP_079022.2| flagellar basal body rod protein FlgG [Bacillus licheniformis ATCC
           14580]
 gi|319645990|ref|ZP_08000220.1| FlgE protein [Bacillus sp. BT1B_CT2]
 gi|52348110|gb|AAU40744.1| FlgE [Bacillus licheniformis ATCC 14580]
 gi|145902944|gb|AAU23384.2| flagellar hook protein [Bacillus licheniformis ATCC 14580]
 gi|317391740|gb|EFV72537.1| FlgE protein [Bacillus sp. BT1B_CT2]
          Length = 263

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E ++M    R + +N + I  S +++   ++L R
Sbjct: 221 EMSNVDLSEEFSEMIIAQRGFQSNAKIITTSDEILQELVNLKR 263



 Score = 36.4 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          SG+     ++ +++ NI+N  T G       Y++  ++F++++   
Sbjct: 10 SGMKNFQTKLDVVANNISNINTAG-------YKKSRVTFKDIVSQQ 48


>gi|150019110|ref|YP_001311364.1| flagellar hook-associated protein FlgK [Clostridium beijerinckii
          NCIMB 8052]
 gi|149905575|gb|ABR36408.1| flagellar hook-associated protein FlgK [Clostridium beijerinckii
          NCIMB 8052]
          Length = 583

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 7/62 (11%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  +  IA  GL VQ   +   S NI+NA TTG       Y R+    +      G 
Sbjct: 1  MSGLFDTFTIAKRGLNVQQGNINTTSHNISNASTTG-------YSRQRAVVQTTRPFGGT 53

Query: 61 VR 62
           R
Sbjct: 54 SR 55



 Score = 34.5 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  ET ++ +    Y AN + I    +++   ++ L+
Sbjct: 542 SGVSIDEETTNLIQFQHAYQANAKVISTVDELLDVVINGLK 582


>gi|326402284|ref|YP_004282365.1| flagellar hook protein FlgE [Acidiphilium multivorum AIU301]
 gi|325049145|dbj|BAJ79483.1| flagellar hook protein FlgE [Acidiphilium multivorum AIU301]
          Length = 425

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 28/47 (59%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G V+  NV++  +  D+    + Y AN + +  +  ++TTT+++++
Sbjct: 379 TGSVENSNVDIATQFTDLINAQQAYTANTKVVTAAQQILTTTVNMVQ 425



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  +   + SGL  QS+    IS+NIAN++T G
Sbjct: 3  IFGALDTSVSGLQAQSSAFTNISDNIANSQTIG 35


>gi|138896904|ref|YP_001127357.1| flagellar hook-basal body protein [Geobacillus
          thermodenitrificans NG80-2]
 gi|134268417|gb|ABO68612.1| Flagellar hook-basal body protein [Geobacillus
          thermodenitrificans NG80-2]
          Length = 273

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 11/69 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S H A + +     R+  +S NI N+ TTG       ++R+  SF E++      +V
Sbjct: 1  MLRSMHTAANTMNALQQRLDTLSHNIVNSNTTG-------FKRREASFAELLTQ----QV 49

Query: 64 KKIGVDQST 72
           ++  D++ 
Sbjct: 50 DRLPDDEAP 58



 Score = 41.5 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           A   G ++  NV++  E   +  T R Y  N + I  S  M+
Sbjct: 223 AMKQGALEQSNVDLGEELIGLMATTRAYQLNARAISISEQML 264


>gi|220927553|ref|YP_002504462.1| flagellar hook-associated protein FlgK [Clostridium cellulolyticum
           H10]
 gi|219997881|gb|ACL74482.1| flagellar hook-associated protein FlgK [Clostridium cellulolyticum
           H10]
          Length = 708

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 20/115 (17%)

Query: 23  QIISENIAN-------ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             +++ IAN         +TG     + YR   +       G+GG+  ++I   Q+T V 
Sbjct: 600 NTVAKQIANLRDVDILVNSTGRVSIDEYYRNLILEL-----GNGGMEAERIATSQATVV- 653

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                   A  +       V++  E ++M +    Y A+ + +     MM T + 
Sbjct: 654 ----NAVDAQRN---AISGVSMDEEMSNMMKYKFAYDASSRVLNIMDSMMETIIT 701


>gi|268680907|ref|YP_003305338.1| flagellar hook protein FlgE [Sulfurospirillum deleyianum DSM 6946]
 gi|268618938|gb|ACZ13303.1| flagellar hook protein FlgE [Sulfurospirillum deleyianum DSM 6946]
          Length = 851

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R Y AN +TI  + +M+ T L L
Sbjct: 810 EMSNVDLSRSLTQLIVIQRGYQANSKTITTADEMLNTLLQL 850



 Score = 38.0 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +GL      M + S NIAN  TTG       Y+    +F  ++  +
Sbjct: 10 TGLQAHQIAMDVESNNIANVNTTG-------YKYSRANFSNLLSQT 48


>gi|228933027|ref|ZP_04095890.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229090704|ref|ZP_04221937.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-42]
 gi|228692646|gb|EEL46372.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-42]
 gi|228826628|gb|EEM72399.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 138

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 23  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 75

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 76  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 131

Query: 125 MTTT 128
               
Sbjct: 132 NQAA 135


>gi|152997581|ref|YP_001342416.1| flagellar basal-body rod protein FlgF [Marinomonas sp. MWYL1]
 gi|150838505|gb|ABR72481.1| flagellar basal-body rod protein FlgF [Marinomonas sp. MWYL1]
          Length = 247

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 83  VANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            A+ +     G ++  NVN + E   +    R +  N++ +    D   ++  +L+
Sbjct: 189 DADPNVQLVSGFIEGSNVNAVEEMTHIMNLARRFEMNVKMMDTIRDNADSSARILQ 244


>gi|94495411|ref|ZP_01301991.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. SKA58]
 gi|94424799|gb|EAT09820.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. SKA58]
          Length = 281

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E   +    R + AN + I+ ++ + TT +++
Sbjct: 235 SGSLERSNVDITDELVQLIAAQRNFQANSKAIEAANTLTTTIVNI 279



 Score = 37.2 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 5/66 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTT----GDTPGSDPYRRKTISFEEVMHGSGGVR 62
          S +++ SGL    A +  IS N+AN  +T          D +   +           GVR
Sbjct: 2  SFYVSLSGLKGAQADLSAISNNVANVNSTAFKKSKAQFGDIFAA-SPMQTTHQVAGQGVR 60

Query: 63 VKKIGV 68
          V+ I  
Sbjct: 61 VQGITQ 66


>gi|237653583|ref|YP_002889897.1| flagellar basal body FlaE domain protein [Thauera sp. MZ1T]
 gi|237624830|gb|ACR01520.1| flagellar basal body FlaE domain protein [Thauera sp. MZ1T]
          Length = 450

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++G+++  NV +  E   M    R Y AN Q+IK    ++ T ++L
Sbjct: 404 SAGMIEDANVELTNELVQMIVQQRNYQANAQSIKAQDQVLQTLVNL 449



 Score = 37.2 bits (86), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S     SGL+V S  + IIS N+AN  T G   GS  +   +  F   + GS   +   +
Sbjct: 2  SFQQGLSGLSVSSKALDIISNNVANTNTIGFKTGSAIF---SDVFAASLTGSISGKQVGV 58

Query: 67 GVDQSTFVEEFDPGH 81
          G       + F  G+
Sbjct: 59 GATLGAVRQTFTQGN 73


>gi|260772275|ref|ZP_05881191.1| flagellar basal-body rod protein FlgF [Vibrio metschnikovii CIP
           69.14]
 gi|260611414|gb|EEX36617.1| flagellar basal-body rod protein FlgF [Vibrio metschnikovii CIP
           69.14]
          Length = 249

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 78  DPGHPV-ANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           DP     A+A+     G ++  NVN + E  ++ +  R +   ++ +  + +M   +  L
Sbjct: 186 DPNAEYVADATVKVLTGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEMDKASDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|228938857|ref|ZP_04101457.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228971738|ref|ZP_04132359.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978347|ref|ZP_04138724.1| Flagellar basal-body rod protein [Bacillus thuringiensis Bt407]
 gi|228781364|gb|EEM29565.1| Flagellar basal-body rod protein [Bacillus thuringiensis Bt407]
 gi|228787828|gb|EEM35786.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820706|gb|EEM66731.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 147

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 32  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 84

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ +TN+LY  ++  I   + +
Sbjct: 85  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKTNQLYGISVNAINTQYAI 140

Query: 125 MTTT 128
               
Sbjct: 141 NQAA 144


>gi|150019072|ref|YP_001311326.1| hypothetical protein Cbei_4260 [Clostridium beijerinckii NCIMB
           8052]
 gi|149905537|gb|ABR36370.1| protein of unknown function DUF1078 domain protein [Clostridium
           beijerinckii NCIMB 8052]
          Length = 363

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A  + I    +++ T   L+R
Sbjct: 317 QGALEGSNVDLTEQFTDMITATRSFQAASKMITTGDEILQTITGLMR 363



 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          SG+ V   ++ +I  NIAN  TT 
Sbjct: 10 SGMKVNQTKLDVIGNNIANVGTTA 33


>gi|313682109|ref|YP_004059847.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM
          16994]
 gi|313154969|gb|ADR33647.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM
          16994]
          Length = 270

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  RM  I+ N+ANA T G       Y+R  + 
Sbjct: 8  ATGGMVAQFNRMDTIASNLANANTAG-------YKRDQLI 40



 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 16/64 (25%)

Query: 78  DPGHPVANA----SGIVKYPNVNVLVETADMRETNR---LYMANLQTIKQSHDMMTTTLD 130
           DP  P+A +     G ++  NVN + E   + E NR   +Y            M +   D
Sbjct: 206 DPLTPLAESGSVMQGFIEKSNVNAVNEMIALVEANRLVGMYQ---------KAMDSQMND 256

Query: 131 LLRD 134
           L +D
Sbjct: 257 LNKD 260


>gi|218288291|ref|ZP_03492590.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241650|gb|EED08823.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 134

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 42/118 (35%), Gaps = 28/118 (23%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK-KIGVDQS 71
           S L   + R  + + NIANA T G       Y+R+ ++FE ++  + G      +G  Q 
Sbjct: 9   SALDASTLRQAVYANNIANAGTPG-------YKRQDVAFETLLQSALGSGDSNALGEAQI 61

Query: 72  T----------------FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                              E +       N++G     NV++  E   M E    Y  
Sbjct: 62  PIGAQRPSYDLSALPNVIPEVYTDTSTTVNSNGN----NVDITEEMVLMAENQVRYDT 115


>gi|163744348|ref|ZP_02151708.1| hypothetical protein OIHEL45_02155 [Oceanibulbus indolifex
          HEL-45]
 gi|161381166|gb|EDQ05575.1| hypothetical protein OIHEL45_02155 [Oceanibulbus indolifex
          HEL-45]
          Length = 247

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 14/73 (19%)

Query: 4  LIASAHIANS-GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          +  S+HI+ S   ++Q   + I + NIANA T G       Y+ + + FE ++  +    
Sbjct: 1  MTESSHISMSLATSLQRQ-LDITANNIANASTAG-------YKGEHVVFEALLQNN---- 48

Query: 63 VKKIGVDQSTFVE 75
             +G DQ+ FV 
Sbjct: 49 -TAMGDDQAAFVS 60



 Score = 39.9 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            G ++  NVN + E   + +  R Y      +  + D+   +L
Sbjct: 198 QGTLELSNVNPVREMTRLIDVQRAYERTNTMMGNADDLRRDSL 240


>gi|28952050|ref|NP_240159.2| flagellar hook protein FlgE [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681699|ref|YP_002468085.1| flagellar hook protein FlgE [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471395|ref|ZP_05635394.1| flagellar hook protein FlgE [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219624542|gb|ACL30697.1| flagellar hook protein FlgE [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086078|gb|ADP66160.1| flagellar hook protein FlgE [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086649|gb|ADP66730.1| flagellar hook protein FlgE [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087235|gb|ADP67315.1| flagellar hook protein FlgE [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087754|gb|ADP67833.1| flagellar hook protein FlgE [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 408

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N Q+ K    ++ T ++L
Sbjct: 369 SNVDLNKELINMIIAQRNYQSNAQSFKTEDKIINTLINL 407



 Score = 40.3 bits (94), Expect = 0.086,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 7/42 (16%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          IA SGL   +  M+IIS NIANA T G       Y+ +   F
Sbjct: 5  IAISGLLANNDYMEIISNNIANASTIG-------YKSRKPLF 39


>gi|320529456|ref|ZP_08030543.1| fagellar hook-basal body protein [Selenomonas artemidis F0399]
 gi|320138293|gb|EFW30188.1| fagellar hook-basal body protein [Selenomonas artemidis F0399]
          Length = 661

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 25/43 (58%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NVN+  + +DM  T R + +N + I  S +M+ T +++ R
Sbjct: 619 EMSNVNIADQFSDMIITQRGFQSNSKIITVSDEMLETLINMKR 661



 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 7/37 (18%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M +I  NIAN  TTG       ++   ++F +++  +
Sbjct: 1  MDVIGNNIANVNTTG-------FKASRVTFADMISQN 30


>gi|289670507|ref|ZP_06491582.1| flagellar hook protein FlgE [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 262

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 216 ESGSLEASTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINI 261


>gi|30019788|ref|NP_831419.1| flagellar basal body rod protein FlgB [Bacillus cereus ATCC 14579]
 gi|49480943|ref|YP_035863.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|52143715|ref|YP_083114.1| flagellar basal body rod protein FlgB [Bacillus cereus E33L]
 gi|196033492|ref|ZP_03100904.1| flagellar basal-body rod protein FlgB [Bacillus cereus W]
 gi|296502343|ref|YP_003664043.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
           BMB171]
 gi|29895333|gb|AAP08620.1| Flagellar basal-body rod protein flgB [Bacillus cereus ATCC 14579]
 gi|49332499|gb|AAT63145.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51977184|gb|AAU18734.1| flagellar basal-body rod protein [Bacillus cereus E33L]
 gi|195993926|gb|EDX57882.1| flagellar basal-body rod protein FlgB [Bacillus cereus W]
 gi|296323395|gb|ADH06323.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
           BMB171]
          Length = 135

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|254475161|ref|ZP_05088547.1| flagellar hook protein FlgE [Ruegeria sp. R11]
 gi|214029404|gb|EEB70239.1| flagellar hook protein FlgE [Ruegeria sp. R11]
          Length = 441

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 81  HPVANASGIVKY-PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            P  +  G  +     +V  E  +M +T R Y +N + I+   +M+  T ++ R
Sbjct: 388 GPTGDILGYAREESATDVAGELTNMIQTQRAYSSNAKVIQTVDEMLQETTNIKR 441



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 14/70 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          + +S +   SGL   ++R+  IS+NIAN+ T G       Y+R    F  ++ GS     
Sbjct: 10 ISSSLNAGVSGLTANASRLASISDNIANSSTAG-------YKRVQTDFHSMVMGSSGGTY 62

Query: 59 --GGVRVKKI 66
            GGVR   +
Sbjct: 63 SAGGVRTTNV 72


>gi|296122946|ref|YP_003630724.1| hypothetical protein Plim_2702 [Planctomyces limnophilus DSM 3776]
 gi|296015286|gb|ADG68525.1| protein of unknown function DUF1078 domain protein [Planctomyces
           limnophilus DSM 3776]
          Length = 256

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G V+  N + +  T ++ E +R + +N+  ++   +M+   L 
Sbjct: 208 QGFVEASNADPMQGTLELIEVSRGFESNVNMMRMQDEMLGRLLQ 251


>gi|163735543|ref|ZP_02142975.1| flagellar hook protein FlgE, putative [Roseobacter litoralis Och
           149]
 gi|161391163|gb|EDQ15500.1| flagellar hook protein FlgE, putative [Roseobacter litoralis Och
           149]
          Length = 416

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E  DM +T R Y +N + I+   +M+  T ++ R
Sbjct: 379 DVAGELTDMIKTQRAYSSNAKVIQTVDEMLQETTNIKR 416


>gi|90423018|ref|YP_531388.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisB18]
 gi|90105032|gb|ABD87069.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisB18]
          Length = 254

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E + M E  R Y      ++Q  D+  T L+
Sbjct: 204 QGYIEKSNVNAVAEMSKMIEVTRAYTQISSMLQQQGDLRKTALE 247


>gi|331005445|ref|ZP_08328824.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC1989]
 gi|330420721|gb|EGG95008.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC1989]
          Length = 400

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 23/46 (50%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV +  E  D+    R + A+ Q +  S++M+   L + R
Sbjct: 353 GSIEISNVELTQEFTDLIIIQRGFQASSQIMSASNEMIQELLSVGR 398


>gi|313903628|ref|ZP_07837018.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
 gi|313466181|gb|EFR61705.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
          Length = 275

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 21/40 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G+++  NV++ +E   +  + R Y  N + +    +M++
Sbjct: 229 QGMLEQSNVDLALEMTRLLASQRAYQLNARAVLTGDEMLS 268


>gi|163850383|ref|YP_001638426.1| hypothetical protein Mext_0950 [Methylobacterium extorquens PA1]
 gi|163661988|gb|ABY29355.1| protein of unknown function DUF1078 domain protein
          [Methylobacterium extorquens PA1]
          Length = 460

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 8/55 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          MD + ++   A SGL  QS  +  IS NIAN++TTG       Y+R   SF +++
Sbjct: 1  MD-VFSALQTAVSGLKAQSFSLSNISGNIANSQTTG-------YKRIDTSFVDML 47



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  N ++  E + M  T + Y AN + +  +  M++  L+++R
Sbjct: 417 VEQSNTDIAAEFSKMIVTQQAYSANTRVMSTAQTMISDLLNVIR 460


>gi|24051371|gb|AAN42702.1| flagellar hook protein FlgE [Shigella flexneri 2a str. 301]
          Length = 642

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 597 NGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVNL 641



 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
           +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 242 AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 294

Query: 64  KKIGVD 69
             I  D
Sbjct: 295 AGITQD 300


>gi|219682254|ref|YP_002468638.1| flagellar hook protein FlgE [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219621987|gb|ACL30143.1| flagellar hook protein FlgE [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
          Length = 408

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R Y +N Q+ K    ++ T ++L
Sbjct: 369 SNVDLNKELINMIIAQRNYQSNAQSFKTEDKIINTLINL 407



 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 7/42 (16%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          IA SGL   +  M+IIS NIANA T G       Y+ +   F
Sbjct: 5  IAISGLLANNDYMEIISNNIANASTIG-------YKSRKPLF 39


>gi|254516989|ref|ZP_05129047.1| flagellar hook protein FlgE [gamma proteobacterium NOR5-3]
 gi|219674494|gb|EED30862.1| flagellar hook protein FlgE [gamma proteobacterium NOR5-3]
          Length = 429

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV +  E  D+    R + AN Q I+    +  T ++L
Sbjct: 390 SNVEITQELVDLIVAQRNFQANAQVIQAEDAITQTVINL 428



 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          +   A SG+   +A + +IS NIAN+ TTG       ++     F +V 
Sbjct: 2  AFSTAISGINAATADLGVISNNIANSSTTG-------FKASRAEFADVY 43


>gi|328545491|ref|YP_004305600.1| flagellar basal body FlaE [polymorphum gilvum SL003B-26A1]
 gi|326415232|gb|ADZ72295.1| Flagellar basal body FlaE [Polymorphum gilvum SL003B-26A1]
          Length = 424

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 14/70 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          L        SG+  QS+++  +++NIAN+ TTG       Y+R    F  ++       +
Sbjct: 3  LYGVMRTGVSGMNAQSSKLGTVADNIANSSTTG-------YKRAASEFSSMILSQGTGTY 55

Query: 57 GSGGVRVKKI 66
           SGGV+   +
Sbjct: 56 NSGGVKAHTV 65



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 11/81 (13%)

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
            V + SG VRV   G      +             G ++  NV++  E   M E+ R Y 
Sbjct: 355 TVSNNSGEVRVGFPGEGGLGSLTV-----------GALESSNVDLASELTSMIESQRGYT 403

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN +  K   D++   ++L+R
Sbjct: 404 ANSKVFKAGSDLLEELVNLVR 424


>gi|322383079|ref|ZP_08056906.1| flagellar hook-basal body-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152741|gb|EFX45367.1| flagellar hook-basal body-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 271

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NVN+  E  ++    R +  + + +  S  MM
Sbjct: 225 QGYLEQSNVNLSDEMTELINVQRAFQLSSRAVTSSDSMM 263



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 7/38 (18%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
           ++ I++ NIAN  T G       Y+RK  SF+E++  
Sbjct: 13 QKLDILANNIANINTVG-------YKRKDASFQEILKS 43


>gi|218528943|ref|YP_002419759.1| hypothetical protein Mchl_0913 [Methylobacterium chloromethanicum
          CM4]
 gi|218521246|gb|ACK81831.1| protein of unknown function DUF1078 domain protein
          [Methylobacterium chloromethanicum CM4]
          Length = 460

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 8/55 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          MD + ++   A SGL  QS  +  IS NIAN++TTG       Y+R   SF +++
Sbjct: 1  MD-VFSALQTAVSGLKAQSFSLSNISGNIANSQTTG-------YKRIDTSFVDML 47



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  N ++  E + M  T + Y AN + +  +  M++  L+++R
Sbjct: 417 VEQSNTDIAAEFSKMIVTQQAYSANTRVMSTAQTMISDLLNVIR 460


>gi|85058011|ref|YP_453713.1| flagellar hook protein FlgE [Sodalis glossinidius str. 'morsitans']
 gi|84778531|dbj|BAE73308.1| flagellar hook protein FlgE [Sodalis glossinidius str. 'morsitans']
          Length = 404

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +++  NV++  E   M    R Y +N QTIK    ++ T + +
Sbjct: 361 MLEASNVDMSNELVKMMTQQRNYQSNAQTIKTQDQLLQTLVSM 403



 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 10/60 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIGVD 69
          SGL   +  + +I  NIANA+T G       ++  + SF ++   S    GV++  +  D
Sbjct: 8  SGLNAAAQALDVIGNNIANAQTVG-------FKSSSASFADMFSESMIGLGVQLAGVQQD 60


>gi|212634349|ref|YP_002310874.1| flagellar basal body rod protein FlgF [Shewanella piezotolerans
           WP3]
 gi|212555833|gb|ACJ28287.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3]
          Length = 247

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG V+  NVN + E   M +  R +   ++ +K + +    +  L+R
Sbjct: 199 SGAVEGSNVNAVHEMVSMIDIQRQFEMQVKMMKTAEETDKASASLMR 245


>gi|332994162|gb|AEF04217.1| flagellar hook protein FlgE [Alteromonas sp. SN2]
          Length = 458

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NVN+  E  DM    R + AN + ++ ++ +  T L++
Sbjct: 420 NVNLTTELIDMIIAQRNFQANSRALEVNNSLNQTILNI 457



 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 4/43 (9%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYR 45
          S +IA SG+A     + + + NIAN  T G         D Y 
Sbjct: 2  SFNIALSGVAAAQKDLDVTANNIANVNTVGFKESRAEFGDVYA 44


>gi|119477953|ref|ZP_01618053.1| flagellar hook protein [marine gamma proteobacterium HTCC2143]
 gi|119448866|gb|EAW30108.1| flagellar hook protein [marine gamma proteobacterium HTCC2143]
          Length = 429

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E   +    R + AN +TI+ +  +    +++
Sbjct: 383 QSGALEESNVDLSEELVRLIIAQRNFQANAKTIETADTVTQAIINI 428



 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVR 62
          S + A SGL   +  +++   NIANA T G         D Y    +S         GV 
Sbjct: 2  SFNTALSGLRAANTDLEVSGNNIANASTIGFKRSRAEFGDVYANSLVSGSNTT--GSGVL 59

Query: 63 VKKI 66
          V  I
Sbjct: 60 VNSI 63


>gi|319944134|ref|ZP_08018412.1| flagellar basal-body rod protein FlgF [Lautropia mirabilis ATCC
           51599]
 gi|319742628|gb|EFV95037.1| flagellar basal-body rod protein FlgF [Lautropia mirabilis ATCC
           51599]
          Length = 245

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G V+  NVNV+     M E  R +   ++ ++ +         +L
Sbjct: 196 QGAVEGSNVNVVESMVGMIEVQRQFEMQMKLLQTAESNEQRASQIL 241


>gi|319787121|ref|YP_004146596.1| flagellar hook-basal body protein [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465633|gb|ADV27365.1| flagellar hook-basal body protein [Pseudoxanthomonas suwonensis
           11-1]
          Length = 406

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +G ++   V++  +  +M    R + AN Q I        T +++
Sbjct: 360 QAGALEASTVDLTEQLVNMITAQRNFQANAQMISTQDQATQTVINI 405



 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 17/72 (23%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------- 58
          S + + SG+   +A + + S NIAN+ T G       ++     F ++   +        
Sbjct: 2  SFNASLSGINAANADLNVTSNNIANSNTVG-------FKSSRAEFADLFSSTSYGLASNA 54

Query: 59 --GGVRVKKIGV 68
             GV+V  +  
Sbjct: 55 VGSGVKVSNVAQ 66


>gi|228926779|ref|ZP_04089847.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228832892|gb|EEM78461.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 138

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 23  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 75

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 76  LPTVNTKNKYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 131

Query: 125 MTTT 128
               
Sbjct: 132 NQAA 135


>gi|170703096|ref|ZP_02893916.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170131993|gb|EDT00501.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 413

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 34.9 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S  + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASNALDVIGNNIANANTVG-------FKSSTAQFSDMYANSIATSVNTQIGIGTG 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G             N +G  +  N
Sbjct: 61 LASVQQQFGQGTINTTNSSLDVAINGNGFFQMSN 94


>gi|311033282|ref|ZP_07711372.1| hypothetical protein Bm3-1_22549 [Bacillus sp. m3-13]
          Length = 280

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G+++  NV++  E  +M    R Y  N ++++ +  MM
Sbjct: 233 QQGMLEQSNVDLASEMTEMTLMQRSYQFNAKSVQFADQMM 272


>gi|110677963|ref|YP_680970.1| flagellar hook protein FlgE, putative [Roseobacter denitrificans
           OCh 114]
 gi|109454079|gb|ABG30284.1| flagellar hook protein FlgE, putative [Roseobacter denitrificans
           OCh 114]
          Length = 436

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E  DM +T R Y +N + I+   +M+  T ++ R
Sbjct: 399 DVAGELTDMIKTQRAYSSNAKVIQTVDEMLQETTNIKR 436



 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +S +   +GL   S R+  IS+NIAN+ T G       Y+R    FE +
Sbjct: 3  ISSSLNAGVAGLQTNSQRLASISDNIANSSTFG-------YKRVQTDFESM 46


>gi|115353118|ref|YP_774957.1| flagellar hook protein FlgE [Burkholderia ambifaria AMMD]
 gi|115283106|gb|ABI88623.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           AMMD]
          Length = 413

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S  + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASNALDVIGNNIANANTVG-------FKSSTAQFSDMYANSIATSVNTQIGIGTA 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           S+  ++F  G             N +G  +  N
Sbjct: 61 LSSVQQQFGQGTINTTNSSLDVAINGNGFFQMSN 94


>gi|332669180|ref|YP_004452188.1| flagellar hook-associated protein FlgK [Cellulomonas fimi ATCC
          484]
 gi|332338218|gb|AEE44801.1| flagellar hook-associated protein FlgK [Cellulomonas fimi ATCC
          484]
          Length = 480

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 7/70 (10%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTT-----GDTPGSDPYRRKTISFEEVMHGSG 59
           +    A S L  Q   + +  +N+ANA T        +  + P   +  S   V HG+G
Sbjct: 4  FSGLGTALSSLIAQRQALDVAGQNVANANTVGYTRQRASMSALP-AAQVPSMFSVNHGAG 62

Query: 60 -GVRVKKIGV 68
           GVRV  I  
Sbjct: 63 EGVRVTGIER 72



 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 16/36 (44%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V+   ET +M    R Y    + +    +M+ T ++
Sbjct: 438 VDTDEETVNMLAFQRAYEGAARVLTAVDEMLDTLIN 473


>gi|315125109|ref|YP_004067113.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018831|gb|ADT66924.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 855

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 813 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 853


>gi|86152379|ref|ZP_01070589.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85840676|gb|EAQ57928.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           260.94]
          Length = 854

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 812 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 852


>gi|86150552|ref|ZP_01068776.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85839004|gb|EAQ56269.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 852

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 810 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 850


>gi|297183135|gb|ADI19278.1| flagellar basal body rod protein [uncultured delta proteobacterium
           HF0200_39L23]
          Length = 258

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NVN ++E + M    R Y    + I    ++    + + R
Sbjct: 210 QGMLEQSNVNTVMEMSRMVNATRSYEMVQKAIMNLDNIDEKAISISR 256


>gi|292492364|ref|YP_003527803.1| flagellar basal-body rod protein FlgF [Nitrosococcus halophilus
           Nc4]
 gi|291580959|gb|ADE15416.1| flagellar basal-body rod protein FlgF [Nitrosococcus halophilus
           Nc4]
          Length = 246

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ASG+++  NVN +    +M    R Y   ++ ++ + D+  ++  +LR
Sbjct: 197 ASGMLEASNVNGVDAMVEMIALARQYEMQVKMMQAAEDLDASSAQMLR 244


>gi|78047586|ref|YP_363761.1| flagellar hook protein FlgE [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78036016|emb|CAJ23707.1| flagellar hook protein FlgE [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 407

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 361 ESGSLEASTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINI 406



 Score = 40.7 bits (95), Expect = 0.069,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 17/71 (23%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------- 58
           + + SG+   +A + + S NIAN  TTG       ++     F ++   +         
Sbjct: 3  FNTSLSGINAANADLNVTSNNIANVNTTG-------FKESRAEFADMFQSTSYGLSRNAV 55

Query: 59 -GGVRVKKIGV 68
            GVRV  +  
Sbjct: 56 GSGVRVSNVAQ 66


>gi|294500942|ref|YP_003564642.1| flagellar basal-body rod protein FlgB [Bacillus megaterium QM
           B1551]
 gi|294350879|gb|ADE71208.1| flagellar basal-body rod protein FlgB [Bacillus megaterium QM
           B1551]
          Length = 129

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 18/126 (14%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----FEEVMH 56
           M     +     +G++  S + Q I++NIAN  T         Y+ KT+S    F +++H
Sbjct: 1   MSLFSTTFQTIENGISYASQKQQTIAQNIANVDTPN-------YKSKTVSRTSEFRDLLH 53

Query: 57  G---SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
               +     K I    S+       G+    A+G     NV++  E ADM E    Y A
Sbjct: 54  NELEAYQTDSKHIPFSDSSQRAITQQGNTSYQANGN----NVDMDKEMADMAENQIYYEA 109

Query: 114 NLQTIK 119
            +  + 
Sbjct: 110 LVDRLN 115


>gi|172061972|ref|YP_001809624.1| flagellar hook protein FlgE [Burkholderia ambifaria MC40-6]
 gi|171994489|gb|ACB65408.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 413

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S  + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASNALDVIGNNIANANTVG-------FKSSTAQFSDMYANSIATSVNTQIGIGTG 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G             N +G  +  N
Sbjct: 61 LASVQQQFGQGTINTTNSSLDVAINGNGFFQMSN 94


>gi|52082076|ref|YP_080867.1| flagellar hook-associated protein FlgK [Bacillus licheniformis ATCC
           14580]
 gi|52787465|ref|YP_093294.1| flagellar hook-associated protein FlgK [Bacillus licheniformis ATCC
           14580]
 gi|319647943|ref|ZP_08002161.1| FlgK protein [Bacillus sp. BT1B_CT2]
 gi|52005287|gb|AAU25229.1| flagellar hook-associated protein 1 [Bacillus licheniformis ATCC
           14580]
 gi|52349967|gb|AAU42601.1| FlgK [Bacillus licheniformis ATCC 14580]
 gi|317390284|gb|EFV71093.1| FlgK protein [Bacillus sp. BT1B_CT2]
          Length = 507

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 26/115 (22%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-------- 53
           +       IA  GL+ Q + + + + NI+NA T G       Y R+ ++F+         
Sbjct: 3   NPTFLGLEIAKRGLSAQQSALSVTANNISNANTEG-------YSRQRVTFKASTPYPSVS 55

Query: 54  ------VMHGSGGVRVKKIGVDQSTFV-EEFDPGHPVANASGIVKYPNVNVLVET 101
                       GV +  +   + +F+  ++   +  A   G      V+   + 
Sbjct: 56  RDSVGLAGQMGTGVEIGSVERVRDSFLDYQYRTQNTKA---GYYNA-KVDAFNQM 106


>gi|89895709|ref|YP_519196.1| hypothetical protein DSY2963 [Desulfitobacterium hafniense Y51]
 gi|89335157|dbj|BAE84752.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 312

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NVN+     +M +  R Y  N + I     M +    L R
Sbjct: 270 EGSNVNLASAMTEMIQVQRAYQLNARMITNGDQMWSMANSLRR 312


>gi|237799206|ref|ZP_04587667.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|237806225|ref|ZP_04592929.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331022061|gb|EGI02118.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331027338|gb|EGI07393.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 442

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P +   G +        NV++ VE  ++ +    Y AN +TI     +M TT+ +
Sbjct: 385 GAPQSGTLGYITGQALEESNVDLTVELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 441



 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|117928057|ref|YP_872608.1| hypothetical protein Acel_0849 [Acidothermus cellulolyticus 11B]
 gi|117648520|gb|ABK52622.1| protein of unknown function DUF1078 domain protein [Acidothermus
           cellulolyticus 11B]
          Length = 398

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A+G ++  NV++  E  ++    R + AN + I  S  ++   ++L
Sbjct: 351 AAGELEGSNVDLSQEFTNLIIAERGFQANAKVITTSDQVLQDLVNL 396



 Score = 40.7 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S     SGL      + ++  NIAN  T G       ++   + FE+ +
Sbjct: 1  MLRSLFSGVSGLRAHQTMLDVVGNNIANVNTVG-------FKASQVEFEDTL 45


>gi|257871307|ref|ZP_05650960.1| flagellar hook-basal body complex protein [Enterococcus gallinarum
           EG2]
 gi|257805471|gb|EEV34293.1| flagellar hook-basal body complex protein [Enterococcus gallinarum
           EG2]
          Length = 233

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  NV+V  E   M +T+R + AN + +  ++  +   + +L +
Sbjct: 184 QQGALEQANVSVADEMVAMIQTSREFEANQKVLSSTNQTLQKAVNELGK 232


>gi|225569955|ref|ZP_03778980.1| hypothetical protein CLOHYLEM_06050 [Clostridium hylemonae DSM
           15053]
 gi|225161425|gb|EEG74044.1| hypothetical protein CLOHYLEM_06050 [Clostridium hylemonae DSM
           15053]
          Length = 236

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E A+  E++R Y   L+ ++ S + +  T++ LR
Sbjct: 190 EGYLELSNVDMAQEMANTVESSRAYSYVLKMVQSSDE-IEQTINSLR 235



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +  S + A+ G   Q  ++ +IS N AN  T G       Y+ K+  F+++M+
Sbjct: 1  MNTSFYTASRGARTQQDKLNVISNNFANVNTYG-------YKAKSSVFQDLMY 46


>gi|148554189|ref|YP_001261771.1| flagellar basal body FlaE domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499379|gb|ABQ67633.1| flagellar basal body FlaE domain protein [Sphingomonas wittichii
           RW1]
          Length = 435

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 26/46 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E   + +  R + AN +TI+ ++ M  T ++L
Sbjct: 388 QSGALEQANVDITEELVALIQAQRNFSANAKTIEAANTMTQTIVNL 433



 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S + A SGL      + +IS NIAN  TTG
Sbjct: 2  SFYTALSGLKASQTDLAVISNNIANVGTTG 31


>gi|161526186|ref|YP_001581198.1| flagellar hook protein FlgE [Burkholderia multivorans ATCC 17616]
 gi|189349098|ref|YP_001944726.1| flagellar hook protein FlgE [Burkholderia multivorans ATCC 17616]
 gi|160343615|gb|ABX16701.1| flagellar basal body FlaE domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189333120|dbj|BAG42190.1| flagellar hook protein [Burkholderia multivorans ATCC 17616]
          Length = 414

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 376 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 414



 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S  + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASNALDVIGNNIANANTVG-------FKSSTAQFSDMYANSIATSVNTQIGIGTA 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G             N +G  +  N
Sbjct: 61 LASVQQQFGQGTINTTNSSLDVAINGNGFFQMSN 94


>gi|329890330|ref|ZP_08268673.1| flagellar hook-associated protein FlgK [Brevundimonas diminuta
          ATCC 11568]
 gi|328845631|gb|EGF95195.1| flagellar hook-associated protein FlgK [Brevundimonas diminuta
          ATCC 11568]
          Length = 735

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 9/65 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-VMHGSG-GV 61
          L +  +IA SG+     +++++S+N++N  T G       Y RK    +     G G GV
Sbjct: 3  LNSIMNIATSGMNAAQTQLRVVSDNVSNVNTPG-------YVRKIADQQSWASQGVGAGV 55

Query: 62 RVKKI 66
           + +I
Sbjct: 56 EIARI 60


>gi|167463161|ref|ZP_02328250.1| flagellar hook-basal body protein [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 275

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NVN+  E  ++    R +  + + +  S  MM
Sbjct: 229 QGYLEQSNVNLSDEMTELINVQRAFQLSSRAVTSSDSMM 267



 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 7/38 (18%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
           ++ I++ NIAN  T G       Y+RK  SF+E++  
Sbjct: 17 QKLDILANNIANINTVG-------YKRKDASFQEILKS 47


>gi|149195336|ref|ZP_01872423.1| flagellar hook protein [Caminibacter mediatlanticus TB-2]
 gi|149134528|gb|EDM23017.1| flagellar hook protein [Caminibacter mediatlanticus TB-2]
          Length = 634

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NVN+     ++  T + + A+ +T+  S +M+   ++L R
Sbjct: 592 ETSNVNMSQAMTELIVTQKAFQASAKTVTTSDEMIQKAINLKR 634


>gi|149173758|ref|ZP_01852387.1| Flagellar biosynthesisprotein [Planctomyces maris DSM 8797]
 gi|148847288|gb|EDL61622.1| Flagellar biosynthesisprotein [Planctomyces maris DSM 8797]
          Length = 274

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 7/48 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          +I   +++  G    S R+ ++S N+ANA TT        ++R    F
Sbjct: 18 MIYGMYLSAQGAEANSVRLDVLSNNMANANTTS-------FKRDVPIF 58



 Score = 41.5 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 76  EFDP-GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             +P   P   A G ++    N + E  ++  ++R++ +N+  IK   + +   L 
Sbjct: 214 RVNPLEGPANIAQGFLEASGTNSVEEMMELVTSSRMFESNINMIKLQDESLGRLLQ 269


>gi|238782792|ref|ZP_04626821.1| Flagellar basal body FlaE domain protein [Yersinia bercovieri ATCC
           43970]
 gi|238716215|gb|EEQ08198.1| Flagellar basal body FlaE domain protein [Yersinia bercovieri ATCC
           43970]
          Length = 359

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV++  E  +M    R Y +N QTIK   +++ 
Sbjct: 318 EASNVDLSKEMVNMIVYQRNYQSNSQTIKTQSELLQ 353


>gi|39998143|ref|NP_954094.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens
           PCA]
 gi|39985089|gb|AAR36444.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens
           PCA]
          Length = 242

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NV+ + E   + ET R +    + +K   DM    
Sbjct: 194 QGYLELSNVSAIQEMVQLIETQRFFEMCSKAVKAYDDMAGKA 235



 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 12/63 (19%)

Query: 13 SGLA---VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
          S L+       R+ ++S N+AN  T G       +++  ++FE ++  +G  +V + G  
Sbjct: 7  SALSGNIAAMKRLDVLSNNLANVNTPG-------FKKDRMTFESLLQAAG--KVPQAGTT 57

Query: 70 QST 72
           + 
Sbjct: 58 DAP 60


>gi|240137459|ref|YP_002961930.1| putative Flagellar hook protein flgE [Methylobacterium extorquens
          AM1]
 gi|240007427|gb|ACS38653.1| putative Flagellar hook protein flgE [Methylobacterium extorquens
          AM1]
          Length = 460

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 8/55 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          MD + ++   A SGL  QS  +  IS NIAN++TTG       Y+R   SF +++
Sbjct: 1  MD-VFSALQTAVSGLKAQSFSLSNISGNIANSQTTG-------YKRIDTSFVDML 47



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  N ++  E + M  T + Y AN + +  +  M++  L+++R
Sbjct: 417 VEQSNTDIAAEFSKMIVTQQAYSANTRVMSTAQTMISDLLNVIR 460


>gi|221215571|ref|ZP_03588534.1| flagellar hook protein FlgE [Burkholderia multivorans CGD1]
 gi|221164559|gb|EED97042.1| flagellar hook protein FlgE [Burkholderia multivorans CGD1]
          Length = 413

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S  + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASNALDVIGNNIANANTVG-------FKSSTAQFSDMYANSIATSVNTQIGIGTA 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G             N +G  +  N
Sbjct: 61 LASVQQQFGQGTINTTNSSLDVAINGNGFFQMSN 94


>gi|114762177|ref|ZP_01441645.1| flagellar hook protein FlgE, putative [Pelagibaca bermudensis
           HTCC2601]
 gi|114545201|gb|EAU48204.1| flagellar hook protein FlgE, putative [Roseovarius sp. HTCC2601]
          Length = 432

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  E  DM  T R Y +N + I+   +M+  T ++ R
Sbjct: 395 DIAQELTDMIRTQRAYSSNAKVIQTVDEMLQETTNMKR 432



 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 7/59 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          + +S +   SGLA  ++R+  IS+NIAN+ T G       YRR    F  ++  SG  R
Sbjct: 3  ISSSLNAGVSGLAGNASRLSAISDNIANSSTYG-------YRRVETDFTALVMSSGSQR 54


>gi|332669198|ref|YP_004452206.1| flagellar hook-basal body protein [Cellulomonas fimi ATCC 484]
 gi|332338236|gb|AEE44819.1| flagellar hook-basal body protein [Cellulomonas fimi ATCC 484]
          Length = 392

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++  NV++  E   +    R + AN + I  S +++   ++L R
Sbjct: 345 AGGALEMSNVDLSSEFTSLIIAQRGFQANSRVITTSDEVLQELVNLKR 392



 Score = 34.1 bits (78), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 4/33 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          L +      SGL      + +   NIAN  TTG
Sbjct: 5  LFSGI----SGLRSHQTMLDVTGNNIANVNTTG 33


>gi|325529014|gb|EGD06027.1| flagellar hook protein FlgE [Burkholderia sp. TJI49]
          Length = 413

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 36.8 bits (85), Expect = 0.96,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S  + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASNALDVIGNNIANANTVG-------FKSSTAQFSDMYANSIATSVNTQIGIGTT 60

Query: 70 QSTFVEEFDPGHPVA---------NASGIVKYPN 94
           ++  ++F  G   A         N +G  +  N
Sbjct: 61 LASVQQQFGQGAINATSSSLDVAINGNGFFQMSN 94


>gi|74101658|gb|AAZ99748.1| FlgEL [Aeromonas hydrophila]
          Length = 397

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +G  +  NV++  E   +  + R Y AN +TI  +  M  
Sbjct: 352 AGAYESSNVDLTGELVSLMTSQRNYQANAKTISSADKMTQ 391



 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          S  I  SGL   +  + +IS N+ANA T G       ++     F  +  G  +GGV + 
Sbjct: 2  SFSIGLSGLRAVNQELSVISNNVANASTAG-------FKSSRAEFAAIYGGGQAGGVEMN 54

Query: 65 KI 66
           +
Sbjct: 55 NV 56


>gi|254251191|ref|ZP_04944509.1| flagellar hook protein FlgE [Burkholderia dolosa AUO158]
 gi|124893800|gb|EAY67680.1| flagellar hook protein FlgE [Burkholderia dolosa AUO158]
          Length = 413

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S+ + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASSALDVIGNNIANANTVG-------FKSSTAQFSDMYANSIATSVNTQIGIGTT 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G             N +G  +  N
Sbjct: 61 LASVQQQFAQGTINTTNSSLDVAINGNGFFQMSN 94


>gi|332701537|ref|ZP_08421625.1| flagellar hook-basal body protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332551686|gb|EGJ48730.1| flagellar hook-basal body protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 532

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   +    R + AN + I  +  +M   ++L R
Sbjct: 489 EQSNVDMSTEMVRLITIQRGFQANGKVITTTDTLMGEVINLKR 531



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          L  S   A SGL   S  M +I  N+ANA T G
Sbjct: 3  LSNSMWTAISGLTSHSESMSVIGNNLANANTLG 35


>gi|254559637|ref|YP_003066732.1| flagellar hook protein flgE [Methylobacterium extorquens DM4]
 gi|254266915|emb|CAX22714.1| putative Flagellar hook protein flgE [Methylobacterium extorquens
          DM4]
          Length = 460

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 8/55 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          MD + ++   A SGL  QS  +  IS NIAN++TTG       Y+R   SF +++
Sbjct: 1  MD-VFSALQTAVSGLKAQSFSLSNISGNIANSQTTG-------YKRIDTSFVDML 47



 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  N ++  E + M  T + Y AN + +  +  M++  L+++R
Sbjct: 417 VEQSNTDIAAEFSKMIVTQQAYSANTRVMSTAQTMISDLLNVIR 460


>gi|15639714|ref|NP_219164.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025952|ref|YP_001933724.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum
           SS14]
 gi|6015169|sp|O07884|FLGE_TREPA RecName: Full=Flagellar hook protein flgE
 gi|2196893|gb|AAB61251.1| FlgE [Treponema pallidum]
 gi|3323028|gb|AAC65692.1| flagellar hook protein (flgE) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018527|gb|ACD71145.1| flagellar hook protein [Treponema pallidum subsp. pallidum SS14]
 gi|291060091|gb|ADD72826.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 463

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 26/47 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV++  +  DM  T + + A  +TI+ S  M+ T L L R
Sbjct: 417 AGTLEMSNVDLTDQFTDMIITQKGFQAGAKTIQTSDTMLDTVLSLKR 463



 Score = 43.0 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 11/54 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M  L +      SG+     RM +I  N+AN  TTG       ++R  ++F+++
Sbjct: 2  MRSLFSGV----SGMQNHQTRMDVIGNNVANVNTTG-------FKRGRVNFQDL 44


>gi|308175373|ref|YP_003922078.1| flagellar hook-basal body protein [Bacillus amyloliquefaciens DSM
           7]
 gi|307608237|emb|CBI44608.1| putative flagellar hook-basal body protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|328555347|gb|AEB25839.1| flagellar basal body rod protein FlgG [Bacillus amyloliquefaciens
           TA208]
          Length = 273

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  E  D+  + R Y  N +TI     M+
Sbjct: 227 EQGALENSNVDMSKEMTDLIVSQRSYQLNSRTITLGDQML 266



 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A++ L     +M  +S N++N+ TTG       Y+ +   F E++   
Sbjct: 1  MLRSMLAASTALNQLQQQMDTVSSNLSNSDTTG-------YKARDSRFSELIRQQ 48


>gi|289666047|ref|ZP_06487628.1| flagellar hook protein FlgE [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 407

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 361 ESGSLEASTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINI 406



 Score = 40.7 bits (95), Expect = 0.076,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 17/71 (23%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------- 58
           + + SG+   +A + + S NIAN  TTG       ++     F ++   +         
Sbjct: 3  FNTSLSGINAANADLNVTSNNIANVNTTG-------FKESRAEFADMFQSTSYGLSRNAV 55

Query: 59 -GGVRVKKIGV 68
            GVRV  +  
Sbjct: 56 GSGVRVSNVAQ 66


>gi|284926913|gb|ADC29265.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 852

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 810 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 850


>gi|329901231|ref|ZP_08272756.1| Flagellar basal-body rod protein flgF [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549163|gb|EGF33755.1| Flagellar basal-body rod protein flgF [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 245

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 79  PGHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           PG   A+     A G ++  NVNV+    +M   +R +  ++  +K +    T    +L
Sbjct: 185 PGGVEADPNVTLAEGALESSNVNVVDAMVNMISLSRQFEMHMSLLKNAETNSTKAAQIL 243


>gi|171321838|ref|ZP_02910739.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171092876|gb|EDT38128.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 413

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S  + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASNALDVIGNNIANANTVG-------FKSSTAQFSDMYANSIATSVNTQIGIGTA 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G             N +G  +  N
Sbjct: 61 LASVQQQFGQGTINTTNSSLDVAINGNGFFQMSN 94


>gi|323498420|ref|ZP_08103416.1| flagellar hook protein FlgE [Vibrio sinaloensis DSM 21326]
 gi|323316493|gb|EGA69508.1| flagellar hook protein FlgE [Vibrio sinaloensis DSM 21326]
          Length = 438

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  N+++  E  D+    R + AN ++++  +      L +
Sbjct: 393 SGTLEQSNIDMTQELVDLITAQRNFQANSRSLEVHNQTQQNILQI 437



 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +A SG++     +   S NIANA T G         D Y   ++         GGV+  K
Sbjct: 4  VALSGISAAQLDLNTTSNNIANANTYGFKESRAEFGDVY-SNSLFTNAKTTPGGGVQAAK 62

Query: 66 IGVDQSTFVEEFDPGHPV 83
          +          +   +P+
Sbjct: 63 VAQQFHEGSSVY-TNNPM 79


>gi|295706288|ref|YP_003599363.1| flagellar basal-body rod protein FlgB [Bacillus megaterium DSM 319]
 gi|294803947|gb|ADF41013.1| flagellar basal-body rod protein FlgB [Bacillus megaterium DSM 319]
          Length = 129

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 18/126 (14%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----FEEVMH 56
           M     +     +G++  S + Q I++NIAN  T         Y+ KT++    F +++H
Sbjct: 1   MSLFSTTFQTIENGISYASQKQQTIAQNIANVDTPN-------YKSKTVTRTSEFRDLLH 53

Query: 57  G---SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
               +     K I    S+       G+    A+G     NV++  E ADM E    Y A
Sbjct: 54  NELEAYQTDSKHIPFSDSSQRVITQQGNTSYQANGN----NVDMDKEMADMAENQIYYEA 109

Query: 114 NLQTIK 119
            +  + 
Sbjct: 110 LVDRLN 115


>gi|261344142|ref|ZP_05971786.1| flagellar hook protein FlgE [Providencia rustigianii DSM 4541]
 gi|282567734|gb|EFB73269.1| flagellar hook protein FlgE [Providencia rustigianii DSM 4541]
          Length = 422

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E   M    R Y +N QTIK    M+ T ++L
Sbjct: 377 SGALESSNVDMSQELISMIVMQRNYQSNAQTIKTQDQMLQTLVNL 421



 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   SA +  I  NIAN+ T G       ++  T SF ++  GSG   GV V
Sbjct: 2  SFSQAVSGLNAASAGLDSIGNNIANSATNG-------FKGATTSFADMFAGSGVGLGVNV 54

Query: 64 KKIGV 68
            +  
Sbjct: 55 AAVTQ 59


>gi|221199739|ref|ZP_03572782.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2M]
 gi|221208656|ref|ZP_03581656.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2]
 gi|221171467|gb|EEE03914.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2]
 gi|221179978|gb|EEE12382.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2M]
          Length = 413

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 34.5 bits (79), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S  + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASNALDVIGNNIANANTVG-------FKSSTAQFSDMYANSIATSVNTQIGIGTA 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G             N +G  +  N
Sbjct: 61 LASVQQQFGQGTINTTNSSLDVAINGNGFFQMSN 94


>gi|254508422|ref|ZP_05120542.1| flagellar hook protein [Vibrio parahaemolyticus 16]
 gi|219548632|gb|EED25637.1| flagellar hook protein [Vibrio parahaemolyticus 16]
          Length = 438

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  N+++  E  D+    R + AN ++++  +      L +
Sbjct: 393 SGTLEQSNIDMTQELVDLITAQRNFQANSRSLEVHNQTQQNILQI 437



 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 10 IANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +A SG++     +   S NIANA T           D Y   ++         GGV+ +K
Sbjct: 4  VALSGISAAQLDLNTTSNNIANANTFGFKESRAEFGDVY-SNSLFTNAKTTPGGGVQAQK 62

Query: 66 IGVDQSTFVEEFDPGHPV 83
          +          +   +P+
Sbjct: 63 VAQQFHEGSSVY-TNNPM 79


>gi|167579488|ref|ZP_02372362.1| flagellar hook protein FlgE [Burkholderia thailandensis TXDOH]
          Length = 413

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S+ + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASSDLDVIGNNIANANTVG-------FKGSTAQFSDMYANSVASAVNNPIGIGTM 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G         +   N +G  +  N
Sbjct: 61 LASVQQQFSQGTITSSTSSLNVAINGNGFFQMSN 94


>gi|90021854|ref|YP_527681.1| flagellar basal body rod protein FlgF [Saccharophagus degradans
           2-40]
 gi|89951454|gb|ABD81469.1| Flagellar basal-body rod FlgF [Saccharophagus degradans 2-40]
          Length = 249

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NVN + E   M E +R Y   ++ ++       ++  LL+
Sbjct: 200 SGFLEASNVNAVNELVSMLELSRQYEMQVKVMQTIKQNSESSSKLLQ 246


>gi|206896319|ref|YP_002246665.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738936|gb|ACI18014.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
           5265]
          Length = 221

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E   +    R Y  + +  + + +++  +++L
Sbjct: 178 EMSNVDLSAEMVKLIAAQRAYQFSAKAFRNADELIEASINL 218


>gi|206558968|ref|YP_002229728.1| flagellar hook protein FlgE [Burkholderia cenocepacia J2315]
 gi|198035005|emb|CAR50877.1| flagellar hook protein 1 FlgE1 [Burkholderia cenocepacia J2315]
          Length = 413

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S  + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASNALDVIGNNIANANTVG-------FKSSTAQFADMYANSVATSVNTQIGIGTS 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G             N +G  +  N
Sbjct: 61 LNSVQQQFGQGTINTTNSSLDVAINGNGFFQMSN 94


>gi|325918877|ref|ZP_08180954.1| flagellar hook protein FlgE [Xanthomonas vesicatoria ATCC 35937]
 gi|325534914|gb|EGD06833.1| flagellar hook protein FlgE [Xanthomonas vesicatoria ATCC 35937]
          Length = 407

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 361 ESGSLEASTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINI 406



 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 17/72 (23%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------- 58
          + + + SG+   +A + + S NIAN  TTG       ++     F ++   +        
Sbjct: 2  AFNTSLSGINAANADLNVTSNNIANVNTTG-------FKESRAEFADMFQSTSYGLSRNA 54

Query: 59 --GGVRVKKIGV 68
             GVRV  +  
Sbjct: 55 VGSGVRVSNVAQ 66


>gi|21242727|ref|NP_642309.1| flagellar hook protein FlgE [Xanthomonas axonopodis pv. citri str.
           306]
 gi|294625274|ref|ZP_06703913.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294664591|ref|ZP_06729932.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325927875|ref|ZP_08189099.1| flagellar hook protein FlgE [Xanthomonas perforans 91-118]
 gi|21108203|gb|AAM36845.1| flagellar biosynthesis hook protein [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|292600448|gb|EFF44546.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292605648|gb|EFF48958.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325541715|gb|EGD13233.1| flagellar hook protein FlgE [Xanthomonas perforans 91-118]
          Length = 407

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 361 ESGSLEASTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINI 406



 Score = 40.7 bits (95), Expect = 0.078,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 17/71 (23%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------- 58
           + + SG+   +A + + S NIAN  TTG       ++     F ++   +         
Sbjct: 3  FNTSLSGINAANADLNVTSNNIANVNTTG-------FKESRAEFADMFQSTSYGLSRNAV 55

Query: 59 -GGVRVKKIGV 68
            GVRV  +  
Sbjct: 56 GSGVRVSNVAQ 66


>gi|51246516|ref|YP_066400.1| flagellar hook protein (FlgE) [Desulfotalea psychrophila LSv54]
 gi|50877553|emb|CAG37393.1| related to flagellar hook protein (FlgE) [Desulfotalea psychrophila
           LSv54]
          Length = 566

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE   M    R Y AN + I    +++   ++L R
Sbjct: 524 EQSNVDMSVEFVRMITIQRGYQANSKIITTVDELLGELINLKR 566


>gi|298530010|ref|ZP_07017412.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509384|gb|EFI33288.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 755

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   + +T + + AN +TI+ +  M+   + + R
Sbjct: 713 EMSNVDLATEFVKLIQTEKGFQANSKTIQTTDTMLGIIMQMKR 755


>gi|205355740|ref|ZP_03222510.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346517|gb|EDZ33150.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 852

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 810 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 850


>gi|163742565|ref|ZP_02149951.1| flagellar hook protein FlgE, putative [Phaeobacter gallaeciensis
           2.10]
 gi|161384150|gb|EDQ08533.1| flagellar hook protein FlgE, putative [Phaeobacter gallaeciensis
           2.10]
          Length = 440

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 81  HPVANASGIVKY-PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            P  +  G  +     +V  E  +M +T R Y +N + I+   +M+  T ++ R
Sbjct: 387 GPTGDILGYAREESATDVAGELTNMIQTQRAYSSNAKVIQTVDEMLQETTNIKR 440



 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 20/73 (27%)

Query: 7  SAHIANS------GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
          S  I++S      GL   ++R+  IS+NIAN+ T G       Y+R    F  ++     
Sbjct: 7  SMTISSSLNAGVAGLTANASRLASISDNIANSSTAG-------YKRVQTDFHSMVMSSSG 59

Query: 56 --HGSGGVRVKKI 66
            + +GGVR   +
Sbjct: 60 GTYSAGGVRTTNV 72


>gi|153951692|ref|YP_001399003.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939138|gb|ABS43879.1| flagellar hook protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 875

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 833 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 873


>gi|312962294|ref|ZP_07776785.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens
          WH6]
 gi|311283221|gb|EFQ61811.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens
          WH6]
          Length = 207

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          ++ +  +A +GL+ Q   +  IS N+AN  TTG       ++R    F+++++ 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTTISNNLANVSTTG-------FKRDRAEFQDLLYQ 47


>gi|330946986|gb|EGH47794.1| flagellar hook protein FlgE [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 80

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P +   G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 23  GAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 79


>gi|298507080|gb|ADI85803.1| flagellar basal body rod protein FlgF [Geobacter sulfurreducens
           KN400]
          Length = 242

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++Y NV+ + E   + ET R +    + IK   DM    
Sbjct: 194 QGHLEYSNVSAIQEMVQLIETQRFFEMCSKAIKAYDDMAGKA 235



 Score = 42.2 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 12/63 (19%)

Query: 13 SGLA---VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
          S L+       R+ ++S N+AN  T G       +++  ++FE ++  +G  +V + G  
Sbjct: 7  SALSGNIAAMKRLDVLSNNLANVNTPG-------FKKDRMTFESLLQAAG--KVPQAGTT 57

Query: 70 QST 72
           + 
Sbjct: 58 DAP 60


>gi|328913715|gb|AEB65311.1| putative flagellar hook-basal body protein [Bacillus
           amyloliquefaciens LL3]
          Length = 274

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  E  D+  + R Y  N +TI     M+
Sbjct: 228 EQGALENSNVDMSKEMTDLIVSQRSYQLNSRTITLGDQML 267



 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A++ L     +M  +S N++N+ TTG       Y+ +   F E++   
Sbjct: 2  MLRSMLAASTALNQLQQQMDTVSSNLSNSDTTG-------YKARDSRFSELIRQQ 49


>gi|160939651|ref|ZP_02086999.1| hypothetical protein CLOBOL_04543 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437442|gb|EDP15206.1| hypothetical protein CLOBOL_04543 [Clostridium bolteae ATCC
           BAA-613]
          Length = 244

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 16/34 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  N N+  E  ++ +T R +  N + +  +  M
Sbjct: 203 EMSNCNMSTEMVNLMQTQRAFQLNSRIVTTADQM 236


>gi|82702454|ref|YP_412020.1| flagellar basal body rod protein FlgF [Nitrosospira multiformis
           ATCC 25196]
 gi|82410519|gb|ABB74628.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 250

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 84  ANASGIVKYP-------NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A A G V          NVNV+    DM   +R +  +++ ++ +         LL
Sbjct: 191 AEADGNVTLSSGALEGSNVNVVEAMVDMISLSRQFETHMKLLQNAEGNAQRASQLL 246


>gi|21231397|ref|NP_637314.1| flagellar hook protein FlgE [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768550|ref|YP_243312.1| flagellar hook protein FlgE [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188991641|ref|YP_001903651.1| flagellar hook protein FlgE [Xanthomonas campestris pv. campestris
           str. B100]
 gi|21113063|gb|AAM41238.1| flagellar biosynthesis, hook protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573882|gb|AAY49292.1| flagellar biosynthesis, hook protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733401|emb|CAP51602.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 407

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 361 ESGSLEASTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINI 406



 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 17/72 (23%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------- 58
          + + + SG+   +A + + S NIAN  TTG       ++     F ++   +        
Sbjct: 2  AFNTSLSGINAANADLNVTSNNIANVNTTG-------FKESRAEFADMFQSTSYGLSRNA 54

Query: 59 --GGVRVKKIGV 68
             GVRV  +  
Sbjct: 55 VGSGVRVSNVAQ 66


>gi|149927799|ref|ZP_01916050.1| hypothetical protein LMED105_11310 [Limnobacter sp. MED105]
 gi|149823421|gb|EDM82652.1| hypothetical protein LMED105_11310 [Limnobacter sp. MED105]
          Length = 245

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           A G ++  NVN +     M    R Y   ++ I  + +
Sbjct: 196 AGGFIESSNVNAVDMMVQMITAARQYETQMKMISTAKE 233


>gi|330899402|gb|EGH30821.1| flagellar hook protein FlgE [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 93

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P +   G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 36  GAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 92


>gi|327441421|dbj|BAK17786.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
          Length = 280

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
            ++  NV+      D+    R + AN + ++     M     ++ R
Sbjct: 233 YLEGSNVDASKAMTDLLTAYRAFEANQKVLQAYDKSMEKAVNEIGR 278



 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +    +   +G+  Q  + +I++ N+ANA T G
Sbjct: 1  MFKGFYTVATGMVAQQRKTEILTNNMANANTPG 33


>gi|325921024|ref|ZP_08182906.1| flagellar hook protein FlgE [Xanthomonas gardneri ATCC 19865]
 gi|325548506|gb|EGD19478.1| flagellar hook protein FlgE [Xanthomonas gardneri ATCC 19865]
          Length = 407

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 361 ESGSLEASTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINI 406



 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 17/72 (23%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------- 58
          + + + SG+   +A + + S NIAN  TTG       ++     F ++   +        
Sbjct: 2  AFNTSLSGINAANADLNVTSNNIANVNTTG-------FKESRAEFADMFQSTSYGLSRNA 54

Query: 59 --GGVRVKKIGV 68
             GVRV  +  
Sbjct: 55 VGSGVRVSNVAQ 66


>gi|320529447|ref|ZP_08030535.1| putative flagellar hook protein FlgE [Selenomonas artemidis
          F0399]
 gi|320138413|gb|EFW30307.1| putative flagellar hook protein FlgE [Selenomonas artemidis
          F0399]
          Length = 681

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 18/79 (22%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          ++ S     SGL     RM +I  NIAN  TTG       ++   ++F +++  +     
Sbjct: 1  MMRSMFSGVSGLKGHQTRMDVIGNNIANVNTTG-------FKASRVTFADMISQNLSGAS 53

Query: 59 ------GGVRVKKIGVDQS 71
                GGV  K+IG+  S
Sbjct: 54 APQGTIGGVNPKQIGLGMS 72



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 25/43 (58%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  + +DM  T R + +N + I  S +M+ T +++ R
Sbjct: 639 EMSNVDIADQFSDMIITQRGFQSNSKIITVSDEMLETLINMKR 681


>gi|192292820|ref|YP_001993425.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris TIE-1]
 gi|192286569|gb|ACF02950.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris TIE-1]
          Length = 623

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 7/67 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  +  IA +GL V  A M ++S N+ANA T G       Y RKT++   V  G  G  V
Sbjct: 3  LGDALAIAMAGLRVNQATMSLVSSNVANAETPG-------YVRKTVNQSAVNAGETGTSV 55

Query: 64 KKIGVDQ 70
          K +GVD+
Sbjct: 56 KVVGVDR 62



 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E A +      Y AN + +   + M  + + 
Sbjct: 584 SGVNMDEEMAHLLSLQNAYAANARVMSTINQMYQSLMQ 621


>gi|152997582|ref|YP_001342417.1| hypothetical protein Mmwyl1_3580 [Marinomonas sp. MWYL1]
 gi|150838506|gb|ABR72482.1| protein of unknown function DUF1078 domain protein [Marinomonas sp.
           MWYL1]
          Length = 565

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A G ++  NV++  E   + E  R Y AN +T++  + +  T ++L
Sbjct: 519 AGGALEESNVDLTAELVALIEAQRNYQANSKTLETENTVTQTIINL 564



 Score = 37.6 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 18/81 (22%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------- 58
           + A SG+   +  + +   NIANA TTG       +++  I F+++ + S         
Sbjct: 3  FNTALSGIKASADYLSVTGNNIANADTTG-------FKKSRIEFDDLYNTSVLGAGSGNN 55

Query: 59 --GGVRVKKIGVDQSTFVEEF 77
             GV V K+  + S+    +
Sbjct: 56 IGSGVSVSKVSQEFSSGNLSY 76


>gi|39936992|ref|NP_949268.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          CGA009]
 gi|39650849|emb|CAE29372.1| possible flagellar hook-associated protein 1 FlgK
          [Rhodopseudomonas palustris CGA009]
          Length = 623

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 7/67 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  +  IA +GL V  A M ++S N+ANA T G       Y RKT++   V  G  G  V
Sbjct: 3  LGDALAIAMAGLRVNQATMSLVSSNVANAETPG-------YVRKTVNQSAVNAGETGTSV 55

Query: 64 KKIGVDQ 70
          K +GVD+
Sbjct: 56 KVVGVDR 62



 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E A +      Y AN + +   + M  + + 
Sbjct: 584 SGVNMDEEMAHLLSLQNAYAANARVMSTINQMYQSLMQ 621


>gi|299066542|emb|CBJ37732.1| Putative flagellar hook protein (flgE) [Ralstonia solanacearum
           CMR15]
          Length = 395

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 26/45 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG+V+  NV++  E +++    R Y A+ Q +  ++DM++    +
Sbjct: 348 SGMVENSNVDLSQEFSNLVIMQRGYQASSQVVSTANDMLSELFSM 392


>gi|315497622|ref|YP_004086426.1| flagellar hook-associated protein flgk [Asticcacaulis excentricus
          CB 48]
 gi|315415634|gb|ADU12275.1| flagellar hook-associated protein FlgK [Asticcacaulis excentricus
          CB 48]
          Length = 718

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 9/63 (14%)

Query: 4  LIASAHIANSG-LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          L +  +I  SG +  QS  ++++S+NI+N  T G       Y RK  + +  + GS G  
Sbjct: 3  LNSILNIGASGLMTAQSQ-LRVVSDNISNVNTPG-------YIRKVGTQQASVIGSQGAG 54

Query: 63 VKK 65
          V  
Sbjct: 55 VMS 57


>gi|134297198|ref|YP_001120933.1| flagellar hook protein FlgE [Burkholderia vietnamiensis G4]
 gi|134140355|gb|ABO56098.1| flagellar basal body FlaE domain protein [Burkholderia
           vietnamiensis G4]
          Length = 413

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S  + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASNALDVIGNNIANANTVG-------FKSSTAQFSDMYANSIATSVNTQIGIGTT 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
            +  ++F  G             N +G  +  N
Sbjct: 61 LGSVQKQFGQGTINTTNSSLDVAINGNGFFQMSN 94


>gi|304392511|ref|ZP_07374451.1| flagellar basal-body rod protein FlgF [Ahrensia sp. R2A130]
 gi|303295141|gb|EFL89501.1| flagellar basal-body rod protein FlgF [Ahrensia sp. R2A130]
          Length = 250

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G V+  NV+ + E  ++   +R +      +++S   +   + +L
Sbjct: 201 QGYVEQANVDPVREMTNLITIHRTFDNVAAMVRKSDAALEKMMQIL 246


>gi|268589982|ref|ZP_06124203.1| flagellar hook protein FlgE [Providencia rettgeri DSM 1131]
 gi|291314700|gb|EFE55153.1| flagellar hook protein FlgE [Providencia rettgeri DSM 1131]
          Length = 419

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E   M    R Y +N QTIK    M+ T ++L
Sbjct: 374 SGALESSNVDMSQELISMIVMQRNYQSNAQTIKTQDQMLQTLVNL 418



 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 10/65 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   SA +  I  NIAN+ T G       ++  T SF ++  GSG   GV V
Sbjct: 2  SFSQAVSGLNAASAGLDSIGNNIANSATNG-------FKGATTSFADMFAGSGVGLGVNV 54

Query: 64 KKIGV 68
            +  
Sbjct: 55 AAVTQ 59


>gi|167630286|ref|YP_001680785.1| flagellar basal-body rod protein flgb, putative [Heliobacterium
          modesticaldum Ice1]
 gi|167593026|gb|ABZ84774.1| flagellar basal-body rod protein flgb, putative [Heliobacterium
          modesticaldum Ice1]
          Length = 137

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 15/69 (21%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
          GL   S R Q+I++N+AN  T G       Y+RK + FE+ +          I  + S  
Sbjct: 16 GLDAASTRHQVIADNLANVDTPG-------YKRKEVQFEDEL-------AAVIDREASGM 61

Query: 74 V-EEFDPGH 81
            +  DP H
Sbjct: 62 TGKRSDPRH 70


>gi|121613214|ref|YP_001001371.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167006263|ref|ZP_02272021.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|30721660|gb|AAP34261.1| FlgE [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87248993|gb|EAQ71955.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 838

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 796 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 836


>gi|300311352|ref|YP_003775444.1| flagellar basal-body rod protein FlgE [Herbaspirillum seropedicae
           SmR1]
 gi|300074137|gb|ADJ63536.1| flagellar basal-body rod FlgE protein [Herbaspirillum seropedicae
           SmR1]
          Length = 432

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  +M    R+Y AN QTIK    ++ T + L
Sbjct: 393 SNVDLTAELVNMIVAQRVYQANSQTIKVQDTVLQTLVSL 431


>gi|258625228|ref|ZP_05720140.1| putative flagellar hook-associated protein 1 [Vibrio mimicus
          VM603]
 gi|258582475|gb|EEW07312.1| putative flagellar hook-associated protein 1 [Vibrio mimicus
          VM603]
          Length = 457

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 16/80 (20%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG--------DTPGSDPYRRKTISFEEVMH 56
          +   +IA SGL      + + ++N+AN  T G         + G   Y + +        
Sbjct: 1  MNIVNIALSGLNANRVALDVTAQNVANINTPGFSRQQAIMTSVGGGKYEKHSP------- 53

Query: 57 GSGGVRVKKIGVDQSTFVEE 76
             GV V  +      F+ +
Sbjct: 54 -GMGVEVSSVRRITDQFLVK 72



 Score = 33.7 bits (77), Expect = 9.1,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++      Y AN++ I  ++ +  + L L
Sbjct: 418 SAVNSDEEAANLMTFANAYNANMKVISTANQLFDSVLQL 456


>gi|218672515|ref|ZP_03522184.1| flagellar basal body rod protein FlgG [Rhizobium etli GR56]
          Length = 58

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  IA +G+  Q   +++I+ NIAN  TTG       ++R    F ++++ +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTG-------FKRARAEFTDLLYQT 47


>gi|255099412|ref|ZP_05328389.1| flagellar basal-body rod protein [Clostridium difficile QCD-63q42]
          Length = 105

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 25/126 (19%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +  I   GL   + R Q I+ NIAN  T G       Y+R  ++FEE ++ +    + 
Sbjct: 1   MNTYDIIKMGLDATNLRSQTIANNIANINTEG-------YKRHYVTFEETLNDA----MP 49

Query: 65  KIGVDQSTFVEEFDPGHPVANASGI-VKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           KI                  N+ G+ V   NV++  E  +   T   Y A +        
Sbjct: 50  KIEEKTD-------------NSKGLRVDGNNVDIEEEKVNQAMTTLQYNALISFANGKIA 96

Query: 124 MMTTTL 129
           M  + +
Sbjct: 97  MTKSII 102


>gi|302134834|ref|ZP_07260824.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato NCPPB
           1108]
          Length = 441

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 20/79 (25%)

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY-----PNVNVLVETADMRETNRLYM 112
           + GV V  +               P +   G +        NV++ +E  ++ +    Y 
Sbjct: 377 ASGVPVSGV---------------PESGTLGYITGQALEESNVDLTMELVNLIKAQSNYQ 421

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN +TI     +M TT+ +
Sbjct: 422 ANAKTISTQSTIMQTTIQM 440



 Score = 37.6 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|288554368|ref|YP_003426303.1| flagellar basal-body rod protein [Bacillus pseudofirmus OF4]
 gi|288545528|gb|ADC49411.1| flagellar basal-body rod protein [Bacillus pseudofirmus OF4]
          Length = 272

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  NV+      +M    R + AN + ++     +   + ++ R
Sbjct: 222 QQGFIERSNVDASQTMTEMMNAYRSFEANQRILQAYDQSLDKAVNEVGR 270



 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          A +G+  Q  R ++++ N+ANA T G        R 
Sbjct: 8  AAAGMIAQQQRQEMLTNNLANANTPGYKADQASLRA 43


>gi|256830199|ref|YP_003158927.1| hypothetical protein Dbac_2432 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579375|gb|ACU90511.1| protein of unknown function DUF1078 domain protein
           [Desulfomicrobium baculatum DSM 4028]
          Length = 562

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E   M  T + + AN +TI     M+T  + L R
Sbjct: 520 EQSNVDLATEFVKMITTEKGFQANSKTITTVDQMLTVLIQLKR 562


>gi|219670133|ref|YP_002460568.1| hypothetical protein Dhaf_4123 [Desulfitobacterium hafniense DCB-2]
 gi|219540393|gb|ACL22132.1| protein of unknown function DUF1078 domain protein
           [Desulfitobacterium hafniense DCB-2]
          Length = 329

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NVN+     +M +  R Y  N + I     M +    L R
Sbjct: 287 EQSNVNLASAMTEMIQVQRAYQLNARMITNGDQMWSMANSLRR 329



 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 24/54 (44%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +   + A +G+  Q   + ++  N++N  T G       Y+ + ++F E +   
Sbjct: 1  MRILNTAATGVRAQQTALDVLGNNMSNVNTPG-------YKAQRVNFAEALAAE 47


>gi|4378858|gb|AAD19726.1| flagellar hook protein [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 412

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  ++    R + AN + I   + M++  +++
Sbjct: 365 QSGALELSNIDLTQELVNLISEQRNFQANSKAISTDNQMVSYVMNI 410


>gi|326796597|ref|YP_004314417.1| flagellar hook-basal body protein [Marinomonas mediterranea MMB-1]
 gi|326547361|gb|ADZ92581.1| flagellar hook-basal body protein [Marinomonas mediterranea MMB-1]
          Length = 565

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G ++  NV++  E   + E  R Y AN +T++  + +  T ++L
Sbjct: 521 GSLEESNVDLTSELVALIEAQRNYQANSKTLETENTVTQTIINL 564



 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 18/73 (24%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------- 58
           + A SG+   +  + +   NIANA TTG       +++  I F ++ + +         
Sbjct: 3  FNTALSGIKASADYLGVTGNNIANADTTG-------FKKSRIEFGDLYNTNVIGSGSSNT 55

Query: 59 --GGVRVKKIGVD 69
             GV V  +  D
Sbjct: 56 IGSGVSVNNVAQD 68


>gi|283956177|ref|ZP_06373662.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283792331|gb|EFC31115.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 848

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 806 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 846


>gi|291288219|ref|YP_003505035.1| flagellar basal-body rod protein FlgB [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885379|gb|ADD69079.1| flagellar basal-body rod protein FlgB [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 136

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 29/120 (24%)

Query: 1   MDYLIASAHIA--NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           M  +     I    +GL   S +  +I+ENIAN  T G       Y+ + + F +VM   
Sbjct: 1   MQGIFERMKIDTLATGLRTASVKNGVIAENIANKDTPG-------YKAQDLEFYDVMDEV 53

Query: 59  GGV--------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
            G                    GVD S+F   +   +P     G     +VNV  E   M
Sbjct: 54  LGTGKKLPLTRTNEKHLPPAGRGVDPSSF--VYQQNNPSVRNDGN----DVNVDYEMTQM 107


>gi|145298488|ref|YP_001141329.1| flagellar basal body protein FlgB [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851260|gb|ABO89581.1| flagellar basal body protein FlgB [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 132

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 20/133 (15%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I    L V+S R +++S NIANA T G       ++ + I+F E +  +   +   
Sbjct: 7   KAFGIHQYTLGVRSKRAEVLSSNIANADTPG-------FKARDINFSEALAQAQHQQGFG 59

Query: 66  IG---------VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           +             +  + ++   +P+   +G      V+V  E ++    +  Y  +L+
Sbjct: 60  MATTSEKHFALQSDAPGLMQY--RNPLQPDTG--DGNTVDVQQERSEFLRNSLEYQTSLE 115

Query: 117 TIKQSHDMMTTTL 129
            +      +   L
Sbjct: 116 FMNGKISGLLKAL 128


>gi|313896037|ref|ZP_07829591.1| putative flagellar hook protein FlgE [Selenomonas sp. oral taxon
          137 str. F0430]
 gi|312975462|gb|EFR40923.1| putative flagellar hook protein FlgE [Selenomonas sp. oral taxon
          137 str. F0430]
          Length = 676

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 18/75 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          ++ S     SGL     RM +I  NIAN  TTG       ++   ++F +++  +     
Sbjct: 1  MMRSMFSGVSGLKGHQTRMDVIGNNIANVNTTG-------FKASRVTFADMISQNLSGAS 53

Query: 59 ------GGVRVKKIG 67
                GGV  K+IG
Sbjct: 54 APQGTIGGVNPKQIG 68



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 25/43 (58%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  + +DM  T R + +N + I  S +M+ T +++ R
Sbjct: 634 EMSNVDIADQFSDMIITQRGFQSNSKIITVSDEMLETLINMKR 676


>gi|229155314|ref|ZP_04283425.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 4342]
 gi|228628239|gb|EEK84955.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 4342]
          Length = 135

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +            
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKGNPDLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|254519398|ref|ZP_05131454.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA]
 gi|226913147|gb|EEH98348.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA]
          Length = 260

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NVN+  E  +M  T R +  N + ++   + +   
Sbjct: 211 QGALEGSNVNISNEMVNMITTMRNFETNQKIVQTIDETLGKA 252


>gi|325295398|ref|YP_004281912.1| fagellar hook-basal body protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065846|gb|ADY73853.1| fagellar hook-basal body protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 238

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 19/47 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV+ + E  ++    R +      I+    +   + ++ +
Sbjct: 191 QGFLESSNVDPVKEMVELINAQRRFEIYGNLIRGLDQLNLKSNEIGK 237


>gi|145297454|ref|YP_001140295.1| flagellar hook protein FlgE [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850226|gb|ABO88547.1| lateral flagellar hook protein LfgE [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 397

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +G  +  NV++  E   +  + R Y AN +TI  +  M  
Sbjct: 352 AGAYESSNVDLTGELVSLMTSQRNYQANAKTISSADKMTQ 391



 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S  I  SGL   +  + +IS N+ANA T G
Sbjct: 2  SFSIGLSGLRAVNQELSVISNNVANASTAG 31


>gi|323498419|ref|ZP_08103415.1| flagellar basal body rod protein FlgF [Vibrio sinaloensis DSM
           21326]
 gi|323316492|gb|EGA69507.1| flagellar basal body rod protein FlgF [Vibrio sinaloensis DSM
           21326]
          Length = 249

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 6/62 (9%)

Query: 78  DPGHPV-ANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           DP     A+A      G ++  NVN + E   + +  R +   ++ +  + +M  ++  L
Sbjct: 186 DPNAAYEADADVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|256830789|ref|YP_003159517.1| flagellar basal-body rod protein FlgB [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579965|gb|ACU91101.1| flagellar basal-body rod protein FlgB [Desulfomicrobium baculatum
           DSM 4028]
          Length = 136

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 30/120 (25%)

Query: 1   MDYLI-ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M  L      +    +  Q  R  I+S N+AN  T G       Y+ +T+ FE+ +  + 
Sbjct: 1   MKSLFPDHIDLTAKVMDFQLQRQNIVSANLANINTPG-------YKARTLEFEKDLQAAL 53

Query: 60  GVRVKKIGVDQSTFVEEFDPGH-PVA----NASGIVKYP----------NVNVLVETADM 104
           G       + +S  V    P H P+A         V             NV++  E A M
Sbjct: 54  G-------LSESGAVARTHPDHFPLAFAADQTEASVTKSLTPRVVQGVDNVDLDKEMAAM 106


>gi|157736472|ref|YP_001489155.1| flagellar hook-associated protein FlgK [Arcobacter butzleri
          RM4018]
 gi|157698326|gb|ABV66486.1| flagellar hook-associated protein FlgK [Arcobacter butzleri
          RM4018]
          Length = 636

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 14/80 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-----GS 58
          L  + ++A +GL+     ++ +S NIAN  T G       Y+++     E+         
Sbjct: 3  LFGTFNVAQTGLSASRYGIETVSNNIANKDTDG-------YKKRVTDLSEIGQMGSSITG 55

Query: 59 GGVRVKKIGVDQSTFVEEFD 78
           GV V  +    S ++  +D
Sbjct: 56 RGVNVDGVSRVTSQYL--YD 73



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+   E  ++ +    Y AN Q I    +M+   L L
Sbjct: 598 VDEDDEMVNLMKLQAAYSANAQMITAVDEMIKVILGL 634


>gi|56551507|ref|YP_162346.1| hypothetical protein ZMO0611 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543081|gb|AAV89235.1| protein of unknown function DUF1078 domain protein [Zymomonas
           mobilis subsp. mobilis ZM4]
          Length = 411

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  ++    R + AN + I   + M++  +++
Sbjct: 364 QSGALELSNIDLTQELVNLISEQRNFQANSKAISTDNQMVSYVMNI 409


>gi|331006033|ref|ZP_08329375.1| Flagellar hook protein flgE [gamma proteobacterium IMCC1989]
 gi|330420162|gb|EGG94486.1| Flagellar hook protein flgE [gamma proteobacterium IMCC1989]
          Length = 877

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 25/46 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  +  ++    R + AN +TI+ +  +  T ++L
Sbjct: 831 QSGALEDSNVDLSEQLVNLIIAQRNFQANAKTIETADTITQTIINL 876



 Score = 40.7 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++A SG+   ++ +++   NIANA TTG     T   D Y   +     +     GVRV
Sbjct: 3  FNVALSGIRAANSDLRVTGNNIANASTTGFKESRTEFGDIY-STSALGSGLNQPGSGVRV 61

Query: 64 KKIGV 68
          + I  
Sbjct: 62 QDIAQ 66


>gi|289679028|ref|ZP_06499918.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae FF5]
          Length = 159

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P +   G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 102 GAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 158


>gi|28869140|ref|NP_791759.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213967582|ref|ZP_03395730.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1]
 gi|301385713|ref|ZP_07234131.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato Max13]
 gi|302060075|ref|ZP_07251616.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato K40]
 gi|28852380|gb|AAO55454.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213927883|gb|EEB61430.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1]
 gi|331017026|gb|EGH97082.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 441

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 20/79 (25%)

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY-----PNVNVLVETADMRETNRLYM 112
           + GV V  +               P +   G +        NV++ +E  ++ +    Y 
Sbjct: 377 ASGVPVSGV---------------PESGTLGYITGQALEESNVDLTMELVNLIKAQSNYQ 421

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN +TI     +M TT+ +
Sbjct: 422 ANAKTISTQSTIMQTTIQM 440



 Score = 37.6 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|332525065|ref|ZP_08401245.1| flagellar basal-body rod protein FlgF [Rubrivivax benzoatilyticus
           JA2]
 gi|332108354|gb|EGJ09578.1| flagellar basal-body rod protein FlgF [Rubrivivax benzoatilyticus
           JA2]
          Length = 240

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 79  PGHPVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           P  P A    G ++  NV+ +     M    R +   ++ ++ +         LL
Sbjct: 184 PADPAARLQDGALEGSNVSPVETMVQMISAARQFEQQIKMLQTAEQKEQGATKLL 238


>gi|315930325|gb|EFV09413.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           305]
          Length = 864

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 822 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 862


>gi|188580157|ref|YP_001923602.1| hypothetical protein Mpop_0889 [Methylobacterium populi BJ001]
 gi|179343655|gb|ACB79067.1| protein of unknown function DUF1078 domain protein
          [Methylobacterium populi BJ001]
          Length = 460

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 8/55 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          MD + ++   A SGL  QS  +  IS NIAN++TTG       Y+R   SF +++
Sbjct: 1  MD-VFSALQTAVSGLKAQSFSLSNISGNIANSQTTG-------YKRIDTSFVDML 47



 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  N ++  E + M  T + Y AN + +  +  M++  L+++R
Sbjct: 417 VEQSNTDIAAEFSKMIVTQQAYSANTRVMSTAQTMISDLLNVIR 460


>gi|229544390|ref|ZP_04433448.1| flagellar basal-body rod protein FlgB [Bacillus coagulans 36D1]
 gi|229324875|gb|EEN90552.1| flagellar basal-body rod protein FlgB [Bacillus coagulans 36D1]
          Length = 129

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 21/127 (16%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            L   S R ++IS NIANA T         Y+ + +SF+ V+  S    V  I   ++  
Sbjct: 14  ALQYASLRQKVISNNIANADTPN-------YKAQDVSFKNVLEDS----VNAISATRTDP 62

Query: 74  V----EEFDPGHPVANASGIVKYPN---VNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
                   D    +   SG     N   V++  E A++      Y      I+     ++
Sbjct: 63  RHFRFSAGDSSSEIVTESGTTYNSNGNSVDIDTEMANLASNQIYYE---SLIELEKGKLS 119

Query: 127 TTLDLLR 133
           + L+++R
Sbjct: 120 SLLNVVR 126


>gi|109899402|ref|YP_662657.1| flagellar hook protein FlgE [Pseudoalteromonas atlantica T6c]
 gi|109701683|gb|ABG41603.1| flagellar basal body FlaE [Pseudoalteromonas atlantica T6c]
          Length = 458

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 4/43 (9%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYR 45
          S +IA SG++     +   + NIAN  T G         D Y 
Sbjct: 2  SFNIALSGVSAAQRDLDTTANNIANVNTVGFKESRAEFGDVYA 44



 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NVN+  E  D+    R + AN + ++ ++ +  T L++
Sbjct: 420 NVNLTTELIDLIIAQRNFQANSRALEVNNQLNQTILNI 457


>gi|152980353|ref|YP_001353112.1| FlgF flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
 gi|151280430|gb|ABR88840.1| FlgF flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
          Length = 246

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 79  PGHPVANA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           P    AN    SG ++  NVNV+    +M    R +  N++ +K +       
Sbjct: 187 PADVDANVGVISGAIEGSNVNVVDAMVNMISLARQFELNMKMLKDADSNAAKA 239


>gi|218563315|ref|YP_002345095.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|112361022|emb|CAL35823.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
          Length = 865

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 823 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 863


>gi|332800001|ref|YP_004461500.1| flagellar basal-body rod protein FlgF [Tepidanaerobacter sp. Re1]
 gi|332697736|gb|AEE92193.1| flagellar basal-body rod protein FlgF [Tepidanaerobacter sp. Re1]
          Length = 255

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  N N + E  D+    R Y A+ + I+   + +   ++
Sbjct: 207 QGALEGSNTNTISEMVDLITAFRAYEASQKVIQTHDETLDRAVN 250



 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
           SG+  + +R  +IS N+AN  T+G       +R 
Sbjct: 9  ASGMLSEMSRTDVISNNLANVNTSGFKKDRAIFRA 43


>gi|330961196|gb|EGH61456.1| flagellar hook protein FlgE [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 442

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P +   G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 385 GAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 441



 Score = 37.6 bits (87), Expect = 0.51,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|330955627|gb|EGH55887.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7]
          Length = 208

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P +   G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 151 GAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 207


>gi|313673204|ref|YP_004051315.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
           DSM 19672]
 gi|312939960|gb|ADR19152.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 206

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 9/82 (10%)

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGH---PVANAS---GIVKYPNVNVLVETADMRETNR 109
              G V V      +   ++ ++      P +N     G ++  NV++  E  +     R
Sbjct: 126 DNKGNVYVDGEVKGK---LQIYNQNGGVVPDSNYEILSGFLEASNVDIAKEMVESITNFR 182

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
              AN++T+K   +M+   +++
Sbjct: 183 YIQANVKTVKTVDEMLGNIVNI 204


>gi|305432574|ref|ZP_07401735.1| flagellar hook protein FlgE [Campylobacter coli JV20]
 gi|304444285|gb|EFM36937.1| flagellar hook protein FlgE [Campylobacter coli JV20]
          Length = 847

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 805 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 845


>gi|88597739|ref|ZP_01100972.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|88190043|gb|EAQ94019.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           84-25]
          Length = 865

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 823 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 863


>gi|315931307|gb|EFV10276.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           327]
          Length = 847

 Score = 44.1 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 805 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 845


>gi|117928046|ref|YP_872597.1| flagellar basal-body rod protein [Acidothermus cellulolyticus 11B]
 gi|117648509|gb|ABK52611.1| flagellar basal-body rod protein [Acidothermus cellulolyticus 11B]
          Length = 125

 Score = 44.1 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 53/128 (41%), Gaps = 20/128 (15%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D    +  ++ +GL+    R + +++N+AN  T         +  K + FE+ +  +  +
Sbjct: 15  DLTTQALEVSIAGLSA---RQRALADNVANIDTPN-------FLAKRVVFEDSLKAA--I 62

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                G  Q T +   +P +   N        NVN+  ET    +T   Y  +++ +   
Sbjct: 63  ASGDPGAAQITTLTSLEPTNTNGN--------NVNLDEETVSAIDTGLKYQTDIEALTAK 114

Query: 122 HDMMTTTL 129
           + ++ T +
Sbjct: 115 YQLLKTAI 122


>gi|107023953|ref|YP_622280.1| flagellar hook protein FlgE [Burkholderia cenocepacia AU 1054]
 gi|116691040|ref|YP_836663.1| flagellar hook protein FlgE [Burkholderia cenocepacia HI2424]
 gi|105894142|gb|ABF77307.1| flagellar basal body FlaE [Burkholderia cenocepacia AU 1054]
 gi|116649129|gb|ABK09770.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 413

 Score = 44.1 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGL+  S  + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLSGASNALDVIGNNIANANTVG-------FKSSTAQFADMYANSVATSVNTQIGIGTT 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G             N +G  +  N
Sbjct: 61 LNSVQQQFGQGTINTTNSSLDVAINGNGFFQMSN 94


>gi|332305615|ref|YP_004433466.1| flagellar hook-basal body protein [Glaciecola agarilytica
          4H-3-7+YE-5]
 gi|332172944|gb|AEE22198.1| flagellar hook-basal body protein [Glaciecola agarilytica
          4H-3-7+YE-5]
          Length = 460

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 4/43 (9%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYR 45
          S +IA SG++     +   + NIAN  T G         D Y 
Sbjct: 2  SFNIALSGVSAAQRDLDTTANNIANVNTVGFKESRAEFGDVYA 44



 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NVN+  E  D+    R + AN + ++ ++ +  T L++
Sbjct: 422 NVNLTTELIDLIIAQRNFQANSRALEVNNQLNQTILNI 459


>gi|148926818|ref|ZP_01810497.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145844543|gb|EDK21650.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 865

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 823 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 863


>gi|54294169|ref|YP_126584.1| flagellar hook-associated protein FlgK [Legionella pneumophila
          str. Lens]
 gi|53754001|emb|CAH15472.1| flagellar hook-associated protein 1 [Legionella pneumophila str.
          Lens]
          Length = 649

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 25/92 (27%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++  +IA SGL      + +   NIAN +T G       Y R++I F  +          
Sbjct: 1  MSILNIAYSGLNAFQRALDVTGNNIANFKTRG-------YSRQSIQFTPIASNRYAGSYI 53

Query: 58 SGGVRVKKI-----------GVDQSTFVEEFD 78
            GV V  I                ++  ++D
Sbjct: 54 GAGVSVSSIYRNVDQFANAQVRSTLSYRTQYD 85


>gi|226315011|ref|YP_002774907.1| flagellar basal-body rod protein [Brevibacillus brevis NBRC 100599]
 gi|226097961|dbj|BAH46403.1| flagellar basal-body rod protein [Brevibacillus brevis NBRC 100599]
          Length = 329

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 16/49 (32%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G  +  NV+       M    R Y AN + I      +     ++ R
Sbjct: 278 QQGWRERSNVDPAQTMTSMMSVLRAYEANQRVITTIDGTLEKAANEIGR 326


>gi|220903670|ref|YP_002478982.1| hypothetical protein Ddes_0391 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867969|gb|ACL48304.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 265

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G  +  NV V+ E  +M E  R + A  + ++ S  +     +
Sbjct: 214 EQGFTEAANVEVVPEMVNMIEVQRQFEAYQKVMQTSDTLDRAATE 258



 Score = 38.8 bits (90), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 10/46 (21%)

Query: 13 SGLAVQSA---RMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          SGL        RM  I+ N+ANA T G       Y+R T++F++ M
Sbjct: 7  SGLFAALTTEHRMNFIANNLANANTRG-------YKRDTVAFKDTM 45


>gi|170734374|ref|YP_001766321.1| flagellar hook protein FlgE [Burkholderia cenocepacia MC0-3]
 gi|254246965|ref|ZP_04940286.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
 gi|124871741|gb|EAY63457.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
 gi|169817616|gb|ACA92199.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 413

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 7/51 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          SGL+  S  + +I  NIANA T G       ++  T  F ++   S    V
Sbjct: 8  SGLSGASNALDVIGNNIANANTVG-------FKSSTAQFADMYANSVATSV 51


>gi|57504594|ref|ZP_00370706.1| flagellar hook protein FlgE [Campylobacter coli RM2228]
 gi|57019489|gb|EAL56183.1| flagellar hook protein FlgE [Campylobacter coli RM2228]
          Length = 845

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 803 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 843


>gi|99082779|ref|YP_614933.1| hypothetical protein TM1040_2939 [Ruegeria sp. TM1040]
 gi|99039059|gb|ABF65671.1| Flagellar hook protein flgE [Ruegeria sp. TM1040]
          Length = 422

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 14/69 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          + +S +   +GLA  S R+  IS+NIAN+ T G       Y+R   SFE ++       +
Sbjct: 3  ISSSLNAGVAGLAANSTRLAAISDNIANSSTAG-------YKRVVTSFESMVISQSGGRY 55

Query: 57 GSGGVRVKK 65
           +GGV V  
Sbjct: 56 AAGGVSVNN 64



 Score = 42.6 bits (100), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E   M +T R Y +N + I+   +M+  T ++ R
Sbjct: 385 DVASELTTMIQTQRAYSSNAKVIQTVDEMLQETTNIKR 422


>gi|110805093|ref|YP_688613.1| flagellar hook protein FlgE [Shigella flexneri 5 str. 8401]
 gi|110614641|gb|ABF03308.1| flagellar hook protein FlgE [Shigella flexneri 5 str. 8401]
          Length = 402

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVNL 401



 Score = 41.1 bits (96), Expect = 0.060,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|154175436|ref|YP_001408075.1| flagella basal body rod protein [Campylobacter curvus 525.92]
 gi|112802880|gb|EAU00224.1| flagella basal body rod protein [Campylobacter curvus 525.92]
          Length = 273

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 3/29 (10%)

Query: 87  SGIVKYPNVNVLVETADMRETNR---LYM 112
            G V+  NVN + E   + ET R   +Y 
Sbjct: 223 QGYVQMSNVNPVTEMVGLIETQRLVDMYQ 251



 Score = 40.3 bits (94), Expect = 0.091,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A +G+  Q +R+ +IS N+AN  T G       ++R  + 
Sbjct: 8  ATAGMVTQFSRLNVISNNLANVNTIG-------FKRNDVV 40


>gi|281600495|gb|ADA73479.1| Flagellar hook protein FlgE [Shigella flexneri 2002017]
 gi|332761421|gb|EGJ91705.1| flagellar hook protein flgE [Shigella flexneri K-671]
 gi|333019459|gb|EGK38742.1| flagellar hook protein flgE [Shigella flexneri K-304]
          Length = 379

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 334 NGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVNL 378



 Score = 40.7 bits (95), Expect = 0.060,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|126734127|ref|ZP_01749874.1| flagellar hook protein FlgE, putative [Roseobacter sp. CCS2]
 gi|126716993|gb|EBA13857.1| flagellar hook protein FlgE, putative [Roseobacter sp. CCS2]
          Length = 444

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 16/86 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          + +S + + +GLA  + R+  IS+NI+N+ T G       Y+R    F+ ++       +
Sbjct: 3  ISSSLNASVAGLAANATRLATISDNISNSSTYG-------YKRAVTDFQSMVIESGQGTY 55

Query: 57 GSGGVR--VKKIGVDQSTFVEEFDPG 80
           +GGVR    ++  ++   V   +P 
Sbjct: 56 SAGGVRTTTSRLIDERGALVSTSNPT 81



 Score = 41.5 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E  ++ +T R Y +N + I+   +M+  T ++ R
Sbjct: 407 DVAGELTELIQTQRAYSSNAKVIQTVDEMLQETTNIKR 444


>gi|58582195|ref|YP_201211.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84624088|ref|YP_451460.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|58426789|gb|AAW75826.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84368028|dbj|BAE69186.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 407

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 361 ESGSLESSTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINI 406



 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 17/72 (23%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------- 58
          + + + SG++  +A + + S NIAN  TTG       ++     F ++   +        
Sbjct: 2  AFNTSLSGISAANADLNVTSNNIANVNTTG-------FKESRAEFADMFQSTSYGLSRNA 54

Query: 59 --GGVRVKKIGV 68
             GVRV  +  
Sbjct: 55 VGSGVRVSNVAQ 66


>gi|320354341|ref|YP_004195680.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
 gi|320122843|gb|ADW18389.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
          Length = 244

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 82  PVANA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           P+A+     G ++  NVN++ E   M +T R + A+L+ ++    +     +L 
Sbjct: 188 PLADYRVLQGSLETSNVNMIEEMTAMVDTQRTFEAHLKALESYSKLGEKQDELG 241


>gi|307609983|emb|CBW99512.1| flagellar hook-associated protein 1 [Legionella pneumophila 130b]
          Length = 649

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 25/92 (27%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++  +IA SGL      + +   NIAN +T G       Y R++I F  +          
Sbjct: 1  MSILNIAYSGLNAFQRALDVTGNNIANFKTRG-------YSRQSIQFTPIASNRYAGSYI 53

Query: 58 SGGVRVKKI-----------GVDQSTFVEEFD 78
            GV V  I                ++  ++D
Sbjct: 54 GAGVSVSSIYRNVDQFANAQVRSTLSYRTQYD 85


>gi|166712062|ref|ZP_02243269.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 407

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 361 ESGSLESSTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINI 406



 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 17/72 (23%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------- 58
          + + + SG++  +A + + S NIAN  TTG       ++     F ++   +        
Sbjct: 2  AFNTSLSGISAANADLNVTSNNIANVNTTG-------FKESRAEFADMFQSTSYGLSRNA 54

Query: 59 --GGVRVKKIGV 68
             GVRV  +  
Sbjct: 55 VGSGVRVSNVAQ 66


>gi|332759635|gb|EGJ89940.1| flagellar hook protein flgE [Shigella flexneri 2747-71]
 gi|332767683|gb|EGJ97876.1| flagellar hook protein FlgE [Shigella flexneri 2930-71]
          Length = 402

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVNL 401



 Score = 40.7 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|187924404|ref|YP_001896046.1| flagellar basal body FlaE domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187715598|gb|ACD16822.1| flagellar basal body FlaE domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 410

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  D+    R Y AN QTIK    +    ++L
Sbjct: 372 SNVDLTHQLVDLITAQRNYQANSQTIKTQQTVDQALINL 410



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 13 SGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          SGL+  S  + +I  NIANA T G        +D Y    +          G R+     
Sbjct: 8  SGLSAASTDLDVIGNNIANANTVGFKSSTAQFADMY-ANAVMTAANNQVGIGTRLSTAEQ 66

Query: 69 D--QSTFVEEFDPGHPVANASGIVKYPN 94
          D    TF +   P     N +G  +  N
Sbjct: 67 DFSNGTFSKTDRPLDIAINGNGFFQLSN 94


>gi|315926654|gb|EFV06034.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 594

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 552 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 592


>gi|225181620|ref|ZP_03735061.1| flagellar hook-associated protein FlgK [Dethiobacter alkaliphilus
          AHT 1]
 gi|225167728|gb|EEG76538.1| flagellar hook-associated protein FlgK [Dethiobacter alkaliphilus
          AHT 1]
          Length = 494

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 17/77 (22%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-----M 55
          M       +I+  G+  Q   +++ + N+ANA T G       Y R+             
Sbjct: 1  MSTFF-GLNISRLGMQAQQKALEVTAHNVANANTPG-------YSRQVAGMSTTTPLPYP 52

Query: 56 HGSG----GVRVKKIGV 68
          +G G    GV+V +I  
Sbjct: 53 NGQGMLGSGVKVSQIAR 69


>gi|114799551|ref|YP_758981.1| flagellar hook protein FlgE [Hyphomonas neptunium ATCC 15444]
 gi|114739725|gb|ABI77850.1| flagellar hook protein FlgE [Hyphomonas neptunium ATCC 15444]
          Length = 434

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 20/70 (28%)

Query: 8  AHIANS------GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------- 54
            I++S      GL+V   R+  IS+NIAN+ T G       Y+R  + F  +       
Sbjct: 1  MSISSSLNAGVMGLSVNGTRLATISDNIANSGTYG-------YKRSAVDFSSMVLQQKTS 53

Query: 55 MHGSGGVRVK 64
           + +GGVRV 
Sbjct: 54 AYAAGGVRVD 63



 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 80  GHPVANASGIVKY-PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             PV   SG        ++  E  D+ ET R Y +N + ++   +M+  T +L R
Sbjct: 380 SGPVGGISGYSLMESTTDIASELTDLIETQRAYSSNAKIVQTVDEMLQETTNLKR 434


>gi|86154000|ref|ZP_01072202.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85842538|gb|EAQ59751.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 845

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 803 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 843


>gi|262364764|gb|ACY61321.1| flagellar hook protein [Yersinia pestis D182038]
          Length = 288

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IAN+ L   + ++  IS NIAN+ T G       ++     F  +   S   GV V 
Sbjct: 2  SFSIANTALNAHTEQLNTISNNIANSATKG-------FKASRTEFSSMYAQSQPLGVAVS 54

Query: 65 KI 66
           +
Sbjct: 55 GV 56


>gi|188576756|ref|YP_001913685.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188576947|ref|YP_001913876.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188521208|gb|ACD59153.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188521399|gb|ACD59344.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 407

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 361 ESGSLESSTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINI 406



 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 17/72 (23%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------- 58
          + + + SG++  +A + + S NIAN  TTG       ++     F ++   +        
Sbjct: 2  AFNTSLSGISAANADLNVTSNNIANVNTTG-------FKESRAEFADMFQSTSYGLSRNA 54

Query: 59 --GGVRVKKIGV 68
             GVRV  +  
Sbjct: 55 VGSGVRVSNVAQ 66


>gi|206974988|ref|ZP_03235903.1| flagellar basal-body rod protein FlgB [Bacillus cereus H3081.97]
 gi|206747007|gb|EDZ58399.1| flagellar basal-body rod protein FlgB [Bacillus cereus H3081.97]
          Length = 135

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKSNAADLKSNPDLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ +TN+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKTNQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|332980933|ref|YP_004462374.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
 gi|332698611|gb|AEE95552.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
          Length = 262

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 10/61 (16%)

Query: 76  EFDP----GHPVA--NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +DP     HPV      G ++  NV++  E  DM E  R Y +     ++   M+  TL
Sbjct: 197 VYDPEQYQSHPVGTGIKQGHIEVSNVDINKEITDMMEVYRHYES----AQRIVSMLDQTL 252

Query: 130 D 130
           D
Sbjct: 253 D 253


>gi|330953722|gb|EGH53982.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7]
          Length = 162

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P +   G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 105 GAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 161


>gi|167835111|ref|ZP_02461994.1| flagellar hook protein FlgE [Burkholderia thailandensis MSMB43]
          Length = 413

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQAVDQTLINL 413



 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S+ + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASSNLDVIGNNIANANTVG-------FKGSTAQFSDMYANSVASAVNNPIGIGTM 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G         +   N +G  +  N
Sbjct: 61 LASVQQQFSQGTITSSTSSLNVAINGNGFFQMSN 94


>gi|89056664|ref|YP_512115.1| hypothetical protein Jann_4173 [Jannaschia sp. CCS1]
 gi|88866213|gb|ABD57090.1| flagellar hook protein FlgE putative [Jannaschia sp. CCS1]
          Length = 452

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 14/68 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          + +S +   +GL+V ++R+  I++NIAN+ T G       Y+R T  F  ++       +
Sbjct: 16 ISSSLNAGVAGLSVNASRLATIADNIANSGTNG-------YKRATADFSSMVIDQGGGTY 68

Query: 57 GSGGVRVK 64
           +GGVRV 
Sbjct: 69 SAGGVRVT 76



 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E   + +T R Y +N + I+   +M+  T +++R
Sbjct: 415 DVAAELTQLIQTQRAYSSNAKIIQTVDEMLQETTNIIR 452


>gi|30062613|ref|NP_836784.1| flagellar hook protein FlgE [Shigella flexneri 2a str. 2457T]
 gi|161485924|ref|NP_706995.2| flagellar hook protein FlgE [Shigella flexneri 2a str. 301]
 gi|30040859|gb|AAP16590.1| flagellar hook protein FlgE [Shigella flexneri 2a str. 2457T]
 gi|313650473|gb|EFS14880.1| flagellar hook protein flgE [Shigella flexneri 2a str. 2457T]
 gi|332758235|gb|EGJ88558.1| flagellar hook protein flgE [Shigella flexneri 4343-70]
 gi|333005591|gb|EGK25109.1| flagellar hook protein flgE [Shigella flexneri K-218]
          Length = 402

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVNL 401



 Score = 40.7 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|163939549|ref|YP_001644433.1| flagellar basal body rod protein FlgB [Bacillus weihenstephanensis
           KBAB4]
 gi|163861746|gb|ABY42805.1| flagellar basal-body rod protein [Bacillus weihenstephanensis
           KBAB4]
          Length = 135

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S G+  K     +S           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEKMNMSSGLYKKNAADLKSNPDLYQTNVMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ +TN+LY  ++  I   + +
Sbjct: 73  LPTANTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKTNQLYGVSINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|119385423|ref|YP_916479.1| hypothetical protein Pden_2696 [Paracoccus denitrificans PD1222]
 gi|119375190|gb|ABL70783.1| protein of unknown function DUF1078 domain protein [Paracoccus
          denitrificans PD1222]
          Length = 446

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 21/91 (23%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
          + ++     SGLA  S R+  IS+NIAN+ T G       Y+R   SFE +         
Sbjct: 3  ISSALSAGVSGLAANSTRLATISDNIANSGTYG-------YKRVDTSFESMVINQGRGGG 55

Query: 55 MHGSGGVR--VKKIGVDQSTFVEEFDPGHPV 83
          ++ + GVR    +I  ++   V      HP+
Sbjct: 56 LYTANGVRAATSRIVDERGNLVP---TSHPL 83



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 80  GHPVANASGIVK-YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             P    +G  +     +V  E  D+ +T R Y +N + I+   +M+  T +L R
Sbjct: 392 DGPTGAVAGYAREASTTDVAAELTDLIQTQRAYTSNAKVIQTVDEMLQETANLKR 446


>gi|241761151|ref|ZP_04759240.1| protein of unknown function DUF1078 domain protein [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|241374770|gb|EER64231.1| protein of unknown function DUF1078 domain protein [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
          Length = 418

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  ++    R + AN + I   + M++  +++
Sbjct: 371 QSGALELSNIDLTQELVNLISEQRNFQANSKAISTDNQMVSYVMNI 416


>gi|157415947|ref|YP_001483203.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386911|gb|ABV53226.1| hypothetical protein C8J_1629 [Campylobacter jejuni subsp. jejuni
           81116]
          Length = 852

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 810 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 850


>gi|2316082|gb|AAC45551.1| hook protein [Campylobacter coli]
          Length = 851

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 809 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 849


>gi|302382561|ref|YP_003818384.1| flagellar hook-associated protein FlgK [Brevundimonas
          subvibrioides ATCC 15264]
 gi|302193189|gb|ADL00761.1| flagellar hook-associated protein FlgK [Brevundimonas
          subvibrioides ATCC 15264]
          Length = 707

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 9/65 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGV 61
          L +  +IANSGL     +++++S+N++N  T G       Y RK      +       GV
Sbjct: 3  LNSILNIANSGLQAAQQQLRVVSDNVSNVNTPG-------YVRKIAEQTSLTTQGVGSGV 55

Query: 62 RVKKI 66
           V +I
Sbjct: 56 EVTRI 60


>gi|148358812|ref|YP_001250019.1| hypothetical protein LPC_0694 [Legionella pneumophila str. Corby]
 gi|296106857|ref|YP_003618557.1| flagellar hook-associated protein 1 FlgK [Legionella pneumophila
          2300/99 Alcoy]
 gi|148280585|gb|ABQ54673.1| hypothetical protein LPC_0694 [Legionella pneumophila str. Corby]
 gi|295648758|gb|ADG24605.1| flagellar hook-associated protein 1 FlgK [Legionella pneumophila
          2300/99 Alcoy]
          Length = 649

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 25/92 (27%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++  +IA SGL      + +   NIAN +T G       Y R++I F  +          
Sbjct: 1  MSILNIAYSGLNAFQRALDVTGNNIANFKTRG-------YSRQSIQFTPIASNRYAGSYI 53

Query: 58 SGGVRVKKI-----------GVDQSTFVEEFD 78
            GV V  I                ++  ++D
Sbjct: 54 GAGVSVSSIYRNVDQFANAQVRSTLSYRTQYD 85


>gi|138896905|ref|YP_001127358.1| flagellar basal-body rod protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|134268418|gb|ABO68613.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 345

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 12/95 (12%)

Query: 45  RRKTISFEE-----VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            R  + F       V  G+G  R     + Q+     +          G ++  NV++  
Sbjct: 255 ARLGVVFAANPKTVVKEGNGLFRSTDGPLPQAPGNVTYM------VKQGFIERSNVDIER 308

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
              D+    R + AN + I+     +   + ++ R
Sbjct: 309 TMTDLLAAYRAFEANQKIIQAYDRSLDKAVNEVGR 343



 Score = 41.8 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
           ++   + A SG+  Q  R+  ++ N+ANA T G    +   R 
Sbjct: 70  MLRGLYTAASGMLAQQRRVDWLTNNLANAETPGYKADAGAMRA 112


>gi|21748188|emb|CAD41958.1| flagellar hook protein [Pseudomonas fluorescens]
          Length = 181

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVN+  E  D+ +    Y AN +TI     +M T + +
Sbjct: 142 SNVNLTNELVDLIKAQSNYQANAKTISTQSTIMQTIIQM 180


>gi|324325761|gb|ADY21021.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 135

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        ++           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKSNTADLKTNADLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|57236913|ref|YP_179866.1| flagellar hook protein FlgE [Campylobacter jejuni RM1221]
 gi|57165717|gb|AAW34496.1| flagellar hook protein [Campylobacter jejuni RM1221]
 gi|315059173|gb|ADT73502.1| Flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 845

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 803 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 843


>gi|118475525|ref|YP_892884.1| flagellar hook protein FlgE [Campylobacter fetus subsp. fetus
           82-40]
 gi|118414751|gb|ABK83171.1| flagellar hook protein FlgE [Campylobacter fetus subsp. fetus
           82-40]
          Length = 911

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R Y AN +TI     M+ T L L
Sbjct: 869 EMSNVDLSRSLTQLIVVQRGYQANSKTITTGDQMLNTLLQL 909


>gi|260752886|ref|YP_003225779.1| hypothetical protein Za10_0647 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552249|gb|ACV75195.1| protein of unknown function DUF1078 domain protein [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
          Length = 417

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  ++    R + AN + I   + M++  +++
Sbjct: 370 QSGALELSNIDLTQELVNLISEQRNFQANSKAISTDNQMVSYVMNI 415


>gi|326939357|gb|AEA15253.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 135

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ +TN+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKTNQLYGISVNAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|283953666|ref|ZP_06371197.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283794707|gb|EFC33445.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 864

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 822 EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 862


>gi|258622494|ref|ZP_05717516.1| putative flagellar hook-associated protein 1 [Vibrio mimicus
          VM573]
 gi|258585194|gb|EEW09921.1| putative flagellar hook-associated protein 1 [Vibrio mimicus
          VM573]
          Length = 457

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 16/80 (20%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG--------DTPGSDPYRRKTISFEEVMH 56
          +   +IA SGL      + + ++N+AN  T G         + G   Y + +        
Sbjct: 1  MNIVNIALSGLNANRVALDVTAQNVANINTPGFSRQQAIMTSVGGGKYEKHSP------- 53

Query: 57 GSGGVRVKKIGVDQSTFVEE 76
             GV V  +      F+ +
Sbjct: 54 -GMGVEVNSVRRITDQFLVK 72



 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++   +  Y AN++ I  ++ +  + L L
Sbjct: 418 SAVNSDEEAANLMTFSNAYNANMKVISTANQLFDSVLQL 456


>gi|187934928|ref|YP_001885009.1| flagellar hook-associated protein FlgK [Clostridium botulinum B
          str. Eklund 17B]
 gi|187723081|gb|ACD24302.1| flagellar hook-associated protein FlgK [Clostridium botulinum B
          str. Eklund 17B]
          Length = 604

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
          M  L  +  +A  GL VQ   +   S NIANA T G
Sbjct: 1  MAGLFDTFTVAKRGLNVQQGAINTTSHNIANANTVG 36



 Score = 34.5 bits (79), Expect = 4.3,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E  ++ +    Y AN + +    +++   ++ L+
Sbjct: 563 SGVSLDEEMTNLIQFQHAYSANAKVVSTVDELLDVVINGLK 603


>gi|149195335|ref|ZP_01872422.1| flagellar hook protein E [Caminibacter mediatlanticus TB-2]
 gi|149134527|gb|EDM23016.1| flagellar hook protein E [Caminibacter mediatlanticus TB-2]
          Length = 869

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R + AN +TI  S  M+ T L L
Sbjct: 827 EMSNVDLSRSLTQLIVIQRGFQANSKTITTSDQMLNTLLQL 867



 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          SGL      M + + NIAN  T G
Sbjct: 10 SGLNAHQIAMDVEANNIANVNTVG 33


>gi|317011316|gb|ADU85063.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          SouthAfrica7]
          Length = 606

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + M +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMMDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|330447910|ref|ZP_08311558.1| flagellar hook-associated protein FlgK [Photobacterium leiognathi
          subsp. mandapamensis svers.1.1.]
 gi|328492101|dbj|GAA06055.1| flagellar hook-associated protein FlgK [Photobacterium leiognathi
          subsp. mandapamensis svers.1.1.]
          Length = 455

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 12/77 (15%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-----EVMHGSG 59
          +   +I  SGL      + + + N+AN  T G       Y R+          E+     
Sbjct: 1  MNMINIGLSGLNANKTALDVTAHNVANVNTVG-------YSRQQAMMSALAGRELFSAGS 53

Query: 60 GVRVKKIGVDQSTFVEE 76
          GV V  I      F+ +
Sbjct: 54 GVEVDSIRRVSDQFIVK 70



 Score = 38.8 bits (90), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
             M G   +  ++  VDQ          +   +         VN   E A++      Y 
Sbjct: 381 ASMVGKTAIETRQAAVDQKAAETLSSQANAARDN-----LSAVNSDEEAANLMTFTNAYQ 435

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++ I  ++++  + L LL
Sbjct: 436 ANMKVISTANELFDSVLRLL 455


>gi|255305269|ref|ZP_05349441.1| flagellar basal-body rod protein [Clostridium difficile ATCC 43255]
          Length = 105

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 25/126 (19%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +  I    L   + R Q I+ NIAN  T G       Y+R  ++FEE ++ +      
Sbjct: 1   MNTYDIIKMALDATNLRSQTIANNIANINTEG-------YKRHYVTFEETLNDA------ 47

Query: 65  KIGVDQSTFVEEFDPGHPVANASGI-VKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                     E+ D      N+ G+ V   NV++  E  +       Y A +        
Sbjct: 48  -----MPKIEEKID------NSKGLRVDGNNVDIEEEKVNQAMATLQYNALISFANGKIA 96

Query: 124 MMTTTL 129
           M  + +
Sbjct: 97  MTKSII 102


>gi|149173757|ref|ZP_01852386.1| flagellar hook basal body protein flgG [Planctomyces maris DSM
           8797]
 gi|148847287|gb|EDL61621.1| flagellar hook basal body protein flgG [Planctomyces maris DSM
           8797]
          Length = 266

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV  + E  ++ +T R +  N Q ++ +   + T  +L R
Sbjct: 219 QGFLEQSNVEPVRELVELIKTQRNFELNSQVVQAADQTLQTVANLRR 265



 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 10/55 (18%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVR 62
          + +G+A  S  + II+ N+AN+ TT        Y++   +FE++ + +    GV+
Sbjct: 9  SATGMAANSFNLDIIANNLANSSTTA-------YKQSRANFEDIFYENFKLPGVQ 56


>gi|148546706|ref|YP_001266808.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
          putida F1]
 gi|148510764|gb|ABQ77624.1| flagellar basal body FlaE domain protein [Pseudomonas putida F1]
          Length = 584

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 18/71 (25%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------- 58
          S +I  SGL   + ++ +   NIAN  TTG       ++     F +V  G+        
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVNTTG-------FKASRAEFADVYAGANRLGVGKN 54

Query: 59 ---GGVRVKKI 66
              GVR+  I
Sbjct: 55 QVGNGVRLAAI 65



 Score = 41.5 bits (97), Expect = 0.046,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NVN+  E  D+ +    Y AN +TI     +M T + +
Sbjct: 543 EGSNVNLTQELVDLIKAQSYYQANAKTISTESTVMQTIIQM 583


>gi|330986468|gb|EGH84571.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 441

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 88  GIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 392 GYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 440



 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|188589591|ref|YP_001920169.1| flagellar hook-associated protein FlgK [Clostridium botulinum E3
          str. Alaska E43]
 gi|251779172|ref|ZP_04822092.1| flagellar hook-associated protein FlgK [Clostridium botulinum E1
          str. 'BoNT E Beluga']
 gi|188499872|gb|ACD53008.1| flagellar hook-associated protein FlgK [Clostridium botulinum E3
          str. Alaska E43]
 gi|243083487|gb|EES49377.1| flagellar hook-associated protein FlgK [Clostridium botulinum E1
          str. 'BoNT E Beluga']
          Length = 604

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
          M  L  +  +A  GL VQ   +   S NIANA T G
Sbjct: 1  MAGLFDTFTVAKRGLNVQQGAINTTSHNIANANTVG 36



 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E  ++ +    Y AN + I    +++   ++ L+
Sbjct: 563 SGVSLDEEMTNLIQFQHAYSANAKVISTVDELLDVVINGLK 603


>gi|296283227|ref|ZP_06861225.1| flagellar basal-body rod protein FlgF [Citromicrobium bathyomarinum
           JL354]
          Length = 248

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           SG V+  NV  +VET  M +  R Y  +++  +  +DM    LD L R
Sbjct: 199 SGGVEGSNVQPIVETTAMIDILRSYQNSVRMTESLNDMRKRALDRLGR 246



 Score = 41.5 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 15/75 (20%)

Query: 8  AHIANSGLAVQ----SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
            I++  L  Q      RM I++ N+AN  T G       +RR+   F E +  +     
Sbjct: 1  MDISSYVLLSQEQALRRRMDIVANNLANTSTVG-------FRREQPMFREYVERAD---- 49

Query: 64 KKIGVDQSTFVEEFD 78
          + I  D        D
Sbjct: 50 EAIIDDAKPTSFVLD 64


>gi|239628977|ref|ZP_04672008.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519123|gb|EEQ58989.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 255

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 6/34 (17%), Positives = 16/34 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  N ++  E  ++ +T R +  N + +  +  M
Sbjct: 214 EMSNADMSTEMVNLMQTQRAFQLNSRIVSTADQM 247



 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 4/31 (12%)

Query: 8  AHI----ANSGLAVQSARMQIISENIANART 34
           +I    A S +      + + + N+AN  T
Sbjct: 1  MNISYYTAVSAMNAFQQDLDVTANNMANVGT 31


>gi|218778847|ref|YP_002430165.1| hypothetical protein Dalk_0994 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760231|gb|ACL02697.1| Putative Flagellar basal-body rod protein FlgG or FlgF
           [Desulfatibacillum alkenivorans AK-01]
          Length = 228

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD---LLR 133
            G ++  NV V  E   M E+ R Y    + +  + +M T  +    +LR
Sbjct: 179 QGYLEQSNVIVPQEMVKMMESLRTYETFQKYMNTASEMDTKAVSEVGMLR 228


>gi|83595982|gb|ABC25342.1| flagellar hook protein [uncultured marine bacterium Ant24C4]
          Length = 437

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 16/86 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          + +S +   +GL+  + R+  IS+NIAN+ T G       Y+R    F+ ++       +
Sbjct: 3  ISSSLNAGVAGLSANATRLATISDNIANSSTFG-------YKRAVTDFQSLVIENSNSKY 55

Query: 57 GSGGVR--VKKIGVDQSTFVEEFDPG 80
           +GGVR    ++  ++ + V   +P 
Sbjct: 56 TAGGVRTTTTRLIDERGSLVSTTNPT 81



 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E   + +T R Y +N + I+   +M+  T ++ R
Sbjct: 400 DVAGELTQLIQTQRAYSSNAKVIQTVDEMLQETTNIKR 437


>gi|217959227|ref|YP_002337775.1| flagellar basal body rod protein FlgB [Bacillus cereus AH187]
 gi|229138443|ref|ZP_04267032.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST26]
 gi|217063551|gb|ACJ77801.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH187]
 gi|228644980|gb|EEL01223.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST26]
          Length = 135

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        ++           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKSNTADLKTNADLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|253681880|ref|ZP_04862677.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str.
           1873]
 gi|253561592|gb|EES91044.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str.
           1873]
          Length = 263

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            ++  NVNV+ E +DM  T R + +N + ++   + +  T+ ++ R
Sbjct: 217 YLEKSNVNVMAEVSDMMMTMRNFESNQKVVQALDETLGKTVNEVGR 262


>gi|92116887|ref|YP_576616.1| flagellar hook-associated protein [Nitrobacter hamburgensis X14]
 gi|91799781|gb|ABE62156.1| Flagellar hook-associated protein [Nitrobacter hamburgensis X14]
          Length = 619

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L ++  IA SGL    A + I+S N+ANA T G       Y  +T+  ++++ GS G  V
Sbjct: 3  LSSALSIAMSGLRANQAALSIVSGNVANANTPG-------YVAQTLVQDQIVTGSTGSGV 55

Query: 64 KKIGVDQS 71
          + IGV+++
Sbjct: 56 RVIGVNRT 63



 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 14/36 (38%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           VN+  E  ++      Y AN   +     MM T L 
Sbjct: 581 VNIDTEMTNLIALQNSYAANAHVMSVVQSMMQTLLQ 616


>gi|330975976|gb|EGH76042.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 442

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P +   G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 385 GAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 441


>gi|289627763|ref|ZP_06460717.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289651647|ref|ZP_06482990.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|330866422|gb|EGH01131.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 441

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 88  GIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 392 GYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 440



 Score = 37.6 bits (87), Expect = 0.51,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|254503570|ref|ZP_05115721.1| conserved domain protein [Labrenzia alexandrii DFL-11]
 gi|222439641|gb|EEE46320.1| conserved domain protein [Labrenzia alexandrii DFL-11]
          Length = 243

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 7/61 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++ ++A S     S R++ +S N+AN  T G       YR   I+F E++  +G  +V
Sbjct: 1  MQSALYVALSAQVALSNRLETVSRNVANMNTAG-------YRADEINFAEMVSKAGPDKV 53

Query: 64 K 64
           
Sbjct: 54 S 54



 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 64  KKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
             +  D++   V+ FD         G V+  N+N + E   M   +R + +  + I 
Sbjct: 173 SAVVPDRAVIPVQVFDQ---HGIRQGYVEGANINPVREMTKMIMISRAFESATKMID 226


>gi|312962588|ref|ZP_07777078.1| flagellar hook protein FlgE [Pseudomonas fluorescens WH6]
 gi|311283168|gb|EFQ61759.1| flagellar hook protein FlgE [Pseudomonas fluorescens WH6]
          Length = 437

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVN+  E  D+ +    Y AN +TI     +M T + +
Sbjct: 398 SNVNLTNELVDLIKAQSNYQANAKTISTQSTIMQTIIQM 436



 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   + ++ +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVATTG 31


>gi|308050371|ref|YP_003913937.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM
           9799]
 gi|307632561|gb|ADN76863.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM
           9799]
          Length = 245

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 6/58 (10%)

Query: 82  PVANA------SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P ANA      +G V+  NVN + E   M E  R +   L+ +K + +       L+R
Sbjct: 188 PYANAVEVTLVTGAVEGSNVNPVNELVGMIEAQRQFDMQLKLMKTAEENDRAHAQLMR 245


>gi|224373467|ref|YP_002607839.1| flagellar hook protein FlgE [Nautilia profundicola AmH]
 gi|223588607|gb|ACM92343.1| flagellar hook protein FlgE [Nautilia profundicola AmH]
          Length = 853

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R + AN +TI  S  M+ T L L
Sbjct: 811 EMSNVDLSRSLTQLIVIQRGFQANSKTITTSDQMLNTLLQL 851



 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          SGL      M + + NIAN  T G
Sbjct: 10 SGLNAHQIAMDVEANNIANVNTVG 33


>gi|84388092|ref|ZP_00990988.1| polar flagellar FlgF [Vibrio splendidus 12B01]
 gi|84377159|gb|EAP94029.1| polar flagellar FlgF [Vibrio splendidus 12B01]
          Length = 249

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN + E   + +  R +   ++ +  + +M  ++  LLR
Sbjct: 201 KGAIEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDSLLR 247


>gi|124268257|ref|YP_001022261.1| flagellar basal body protein [Methylibium petroleiphilum PM1]
 gi|124261032|gb|ABM96026.1| flagellar basal body protein [Methylibium petroleiphilum PM1]
          Length = 150

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          MD L  S +     L ++S R ++I+ NIANA T G       Y+ + + F   +  + G
Sbjct: 18 MDRLTNSLNFQTQALLLRSERQRLIASNIANADTPG-------YQARDMDFGAALREATG 70


>gi|77464881|ref|YP_354385.1| putative flagellar hook protein [Rhodobacter sphaeroides 2.4.1]
 gi|126463723|ref|YP_001044837.1| hypothetical protein Rsph17029_2963 [Rhodobacter sphaeroides ATCC
           17029]
 gi|221640802|ref|YP_002527064.1| hypothetical protein RSKD131_2703 [Rhodobacter sphaeroides KD131]
 gi|332559780|ref|ZP_08414102.1| FlgE2 [Rhodobacter sphaeroides WS8N]
 gi|77389299|gb|ABA80484.1| putative flagellar hook protein [Rhodobacter sphaeroides 2.4.1]
 gi|126105387|gb|ABN78065.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221161583|gb|ACM02563.1| Hypothetical Protein RSKD131_2703 [Rhodobacter sphaeroides KD131]
 gi|332277492|gb|EGJ22807.1| FlgE2 [Rhodobacter sphaeroides WS8N]
          Length = 465

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 80  GHPVANASGIVK-YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             P  +  G  +     +V  E  ++ +T R Y +N + I+   +M+  T +L R
Sbjct: 411 DGPTGDVLGYAREGSTTDVATELTNLIQTQRAYSSNAKIIQTVDEMLQETTNLKR 465



 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 16/74 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          + +S +   +GL   + ++  I++NIAN+ T G       Y+R    FE ++        
Sbjct: 3  ISSSLNAGVAGLNANATKLATIADNIANSGTYG-------YKRADADFESMVITQSANGG 55

Query: 56 -HGSGGVRVKKIGV 68
           + +GGVR   I  
Sbjct: 56 SYAAGGVRANTIRR 69


>gi|292669794|ref|ZP_06603220.1| flagellar hook protein FlgE [Selenomonas noxia ATCC 43541]
 gi|292648591|gb|EFF66563.1| flagellar hook protein FlgE [Selenomonas noxia ATCC 43541]
          Length = 680

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S     SGL     RM +I  NIAN  TTG       ++   ++F +++  +
Sbjct: 1  MMRSMFSGVSGLKGHQTRMDVIGNNIANVNTTG-------FKASRVTFADMISQN 48



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 25/43 (58%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  + +DM  T R + +N + I  S +M+ T +++ R
Sbjct: 638 EMSNVDIADQFSDMIITQRGFQSNSKIITVSDEMLETLINMKR 680


>gi|239815263|ref|YP_002944173.1| hypothetical protein Vapar_2278 [Variovorax paradoxus S110]
 gi|239801840|gb|ACS18907.1| protein of unknown function DUF1078 domain protein [Variovorax
           paradoxus S110]
          Length = 395

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++G V+  NV++  E +D+    R Y A+ Q I  ++DM+     +
Sbjct: 347 SAGRVEISNVDLSQEFSDLVIMQRGYQASSQIISTANDMLQELFSM 392


>gi|71736953|ref|YP_275563.1| flagellar hook protein FlgE [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|257484949|ref|ZP_05638990.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|71557506|gb|AAZ36717.1| flagellar hook protein FlgE [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|320325093|gb|EFW81162.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329352|gb|EFW85345.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|331011042|gb|EGH91098.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 441

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 88  GIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 392 GYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 440



 Score = 37.6 bits (87), Expect = 0.53,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|146278769|ref|YP_001168928.1| hypothetical protein Rsph17025_2736 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557010|gb|ABP71623.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 474

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 80  GHPVANASGIVK-YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             P  +  G  +     +V  E  ++ +T R Y +N + I+   +M+  T +L R
Sbjct: 420 DGPTGDVVGYAREGSTTDVAQELTNLIQTQRAYSSNAKIIQTVDEMLQETTNLKR 474



 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 16/68 (23%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          + +S +   +GL   + ++  I++NIAN+ T G       Y+R    FE ++        
Sbjct: 3  ISSSLNAGVAGLYANATKLASIADNIANSGTYG-------YKRADADFESMVITQSANSG 55

Query: 56 -HGSGGVR 62
           + +GGVR
Sbjct: 56 TYSAGGVR 63


>gi|330889085|gb|EGH21746.1| flagellar hook protein FlgE [Pseudomonas syringae pv. mori str.
           301020]
          Length = 441

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 88  GIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 392 GYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 440



 Score = 37.6 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|298487857|ref|ZP_07005897.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298157582|gb|EFH98662.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 441

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 88  GIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 392 GYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 440



 Score = 37.6 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|317133480|ref|YP_004092794.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
 gi|315471459|gb|ADU28063.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
          Length = 326

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV++  E  +M  T R + AN + I  +  ++   ++L R
Sbjct: 279 SGALEQSNVDLAREFTNMIVTQRGFQANSRVITVADSLLEEIVNLKR 325



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 23/101 (22%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMHGSG- 59
          + + + A +GL  Q   M +I  NIAN  T G       ++     F     + + G   
Sbjct: 1  MRALNSAVTGLQAQQTAMDVIGNNIANVNTDG-------FKASRTDFSDLFYQTLQGGTD 53

Query: 60 ---------GVRVKKIGVDQSTF--VEEFDPGHPVANASGI 89
                   GV+V  +  D ST        P +   N  G 
Sbjct: 54 NTNATQVGYGVKVSGVSKDMSTTGETTTNVPTNLFINGEGY 94


>gi|54297188|ref|YP_123557.1| flagellar hook-associated protein FlgK [Legionella pneumophila
          str. Paris]
 gi|53750973|emb|CAH12384.1| flagellar hook-associated protein 1 [Legionella pneumophila str.
          Paris]
          Length = 649

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 25/92 (27%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++  +IA SGL      + +   NIAN +T G       Y R++I F  +          
Sbjct: 1  MSILNIAYSGLNAFQRALDVTGNNIANFKTRG-------YSRQSIQFTPIASNRYAGSYI 53

Query: 58 SGGVRVKKI-----------GVDQSTFVEEFD 78
            GV V  I                ++  ++D
Sbjct: 54 GAGVSVSSIYRNVDQFANAQVRSTLSYRTQYD 85


>gi|316932824|ref|YP_004107806.1| flagellar basal-body rod protein FlgF [Rhodopseudomonas palustris
           DX-1]
 gi|315600538|gb|ADU43073.1| flagellar basal-body rod protein FlgF [Rhodopseudomonas palustris
           DX-1]
          Length = 253

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G V+  NVN ++E   M +  R Y      ++Q  ++    ++
Sbjct: 203 QGYVEKSNVNSVLEMTRMIDVTRTYTQISAMLQQQSELRKAAIE 246


>gi|188586026|ref|YP_001917571.1| protein of unknown function DUF1078 domain protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179350713|gb|ACB84983.1| protein of unknown function DUF1078 domain protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 508

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G ++  NV++  +  DM  T R + AN ++I    +++   ++L
Sbjct: 463 GALEMSNVDMGEQFTDMIVTQRGFQANSRSITTGDEVLQELVNL 506



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     R+  I  N+AN  T G       ++   ++F++  + +
Sbjct: 1  MLRSMYSGVSGLRNHQTRLDTIGNNVANVNTAG-------FKGDRVTFQDAFNQT 48


>gi|27380938|ref|NP_772467.1| flagellar basal body rod protein FlgF [Bradyrhizobium japonicum
           USDA 110]
 gi|27354104|dbj|BAC51092.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 253

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E + M E  R Y A    ++Q  D+  + ++
Sbjct: 202 QQGYIEKSNVNSVGEMSRMVEVMRSYTAIANLLQQQSDLHKSAIE 246


>gi|326796596|ref|YP_004314416.1| flagellar basal-body rod protein FlgF [Marinomonas mediterranea
           MMB-1]
 gi|326547360|gb|ADZ92580.1| flagellar basal-body rod protein FlgF [Marinomonas mediterranea
           MMB-1]
          Length = 245

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           SG ++  NVN + E  ++ E  R +  N++ +     
Sbjct: 198 SGFLEGSNVNAVEEMTEIMELARRFEMNIKVMDSVRQ 234


>gi|255323568|ref|ZP_05364698.1| flagellar hook protein [Campylobacter showae RM3277]
 gi|255299282|gb|EET78569.1| flagellar hook protein [Campylobacter showae RM3277]
          Length = 543

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 26/45 (57%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +++  NV++     ++  T + Y AN ++I  S++M+   ++L R
Sbjct: 499 MLEQSNVDLAQALTEVIVTQKAYDANAKSITTSNEMLQRAIELKR 543


>gi|78221659|ref|YP_383406.1| flagellar hook-associated protein [Geobacter metallireducens
          GS-15]
 gi|78192914|gb|ABB30681.1| Flagellar hook-associated protein [Geobacter metallireducens
          GS-15]
          Length = 477

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 14/72 (19%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
          + +   I  S L  Q   +++ SENI N  T G       Y R+T      +        
Sbjct: 3  IQSILDIGKSSLIAQRLALEVTSENITNVNTPG-------YSRQTTVLATGITTMERGFP 55

Query: 58 -SGGVRVKKIGV 68
             GV+V  I  
Sbjct: 56 MGTGVKVADIQR 67


>gi|332296517|ref|YP_004438440.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
 gi|332179620|gb|AEE15309.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
          Length = 251

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTI----KQSHDMMTT 127
            G ++  NVN + E  DM    R Y +  + I     ++  M++ 
Sbjct: 204 QGYLESSNVNTVREMVDMIALERAYESGQKAIVTEDNETGQMLSQ 248


>gi|206895941|ref|YP_002246669.1| flagellar hook-associated protein FlgK [Coprothermobacter
          proteolyticus DSM 5265]
 gi|206738558|gb|ACI17636.1| flagellar hook-associated protein FlgK [Coprothermobacter
          proteolyticus DSM 5265]
          Length = 540

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 29/85 (34%), Gaps = 21/85 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          +I S  IA   L  Q   + + S NIAN  T G       Y R+   F            
Sbjct: 1  MIWSLEIAKRSLQAQMLALDVTSHNIANVNTPG-------YSRQEAVFRPTQPYGIVSWL 53

Query: 56 ------HGSGGVRVKKIGVDQSTFV 74
                    GV++  I   ++ FV
Sbjct: 54 GTINPGQVGTGVQISSIRRLRNDFV 78


>gi|294501850|ref|YP_003565550.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium
           QM B1551]
 gi|294351787|gb|ADE72116.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium
           QM B1551]
          Length = 273

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  E  DM    R Y  N ++I  +  MM
Sbjct: 226 EQGKLEQSNVDLSKELTDMSIAQRAYQFNSRSISIADQMM 265


>gi|260779341|ref|ZP_05888233.1| flagellar hook-associated protein FlgK [Vibrio coralliilyticus
          ATCC BAA-450]
 gi|260605505|gb|EEX31800.1| flagellar hook-associated protein FlgK [Vibrio coralliilyticus
          ATCC BAA-450]
          Length = 457

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 14/75 (18%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MHGSGGV 61
          +IA SGL      + + ++N++N  T G       Y R+      V       +    GV
Sbjct: 5  NIALSGLNANRVALDVTAQNVSNINTPG-------YSRQQALMASVGGTKHDKLSPGLGV 57

Query: 62 RVKKIGVDQSTFVEE 76
           V  I      F+ +
Sbjct: 58 EVTSIRRVTDEFLVK 72


>gi|323341368|ref|ZP_08081612.1| flagellar distal rod protein [Lactobacillus ruminis ATCC 25644]
 gi|323091245|gb|EFZ33873.1| flagellar distal rod protein [Lactobacillus ruminis ATCC 25644]
          Length = 234

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G+++  N +      D+ +T+R + AN + +  ++  ++  + +L +
Sbjct: 186 QGMLEGSNTDTAQNMVDLIQTSREFEANQKVLSTANQTLSKAVNELGK 233


>gi|254461659|ref|ZP_05075075.1| FlgK flagellar hook-associated protein 1, putative
          [Rhodobacterales bacterium HTCC2083]
 gi|206678248|gb|EDZ42735.1| FlgK flagellar hook-associated protein 1, putative
          [Rhodobacteraceae bacterium HTCC2083]
          Length = 1431

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + +   I  S ++ Q   + +  +NI NA T G       YRR+  S  EV  
Sbjct: 1  MASLLDIGRSAVSAQREALNVTGQNIVNANTEG-------YRRREASLTEVSD 46


>gi|327398582|ref|YP_004339451.1| flagellar basal body rod protein [Hippea maritima DSM 10411]
 gi|327181211|gb|AEA33392.1| flagellar basal body rod protein [Hippea maritima DSM 10411]
          Length = 103

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 25/124 (20%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + + SG+     R  I + N+AN  T         Y++  +  +E     GGV  K   
Sbjct: 3   INTSLSGIKNAFYRQDITANNVANINT-------KNYKQVNVINQEA--KGGGVEAKTTV 53

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              +             N +G     NV++  +  +         AN+  I+  ++M+ +
Sbjct: 54  SKAAP------------NRNGN----NVSLADQMVNQISNQDQNKANVNVIRAQNEMIGS 97

Query: 128 TLDL 131
            +D+
Sbjct: 98  LIDI 101


>gi|170748125|ref|YP_001754385.1| flagellar hook protein FlgE [Methylobacterium radiotolerans JCM
          2831]
 gi|170654647|gb|ACB23702.1| flagellar basal body FlaE domain protein [Methylobacterium
          radiotolerans JCM 2831]
          Length = 407

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 7/43 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          SG+  QS R+  +++NI N  TTG       Y+R +  F  ++
Sbjct: 12 SGMNAQSNRLGTVADNIQNQNTTG-------YKRASTEFSSLL 47



 Score = 38.0 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A M E    Y AN +  +   +M+   ++L R
Sbjct: 367 STVDLGNELATMIEAQTTYGANSKVFQTGSEMLELLVNLKR 407


>gi|159184364|ref|NP_353582.2| flagellar basal body rod protein FlgB [Agrobacterium tumefaciens
           str. C58]
 gi|159139678|gb|AAK86367.2| flagellar basal-body rod protein FlgB [Agrobacterium tumefaciens
           str. C58]
          Length = 130

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 49/119 (41%), Gaps = 18/119 (15%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGS----GGVRV--KKIGVDQ- 70
           S R ++++ NIANA T         +  K +S FE VM  +    G  R     +G    
Sbjct: 18  SVRQEVVATNIANANTPK-------FHAKDVSPFEAVMQATSQQVGMARTNPAHLGESTL 70

Query: 71  STFVEEFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           S  +   D  +PV N  G+ +  N V +  E     E  R Y  N   +K  H MM  T
Sbjct: 71  SENIAVRD--NPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLVKSFHRMMLMT 127


>gi|323495376|ref|ZP_08100453.1| flagellar basal body rod protein FlgF [Vibrio brasiliensis LMG
           20546]
 gi|323310299|gb|EGA63486.1| flagellar basal body rod protein FlgF [Vibrio brasiliensis LMG
           20546]
          Length = 249

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 6/62 (9%)

Query: 78  DPGHPV-ANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           DP     A+A      G ++  NVN + E   + +  R +   ++ +  + DM   +  L
Sbjct: 186 DPNAAYEADADVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEDMDKASDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|3286760|emb|CAA05173.1| flagellar hook subunit protein [Campylobacter jejuni]
          Length = 862

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 820 EMSNVDLSRALTELIIIQRGYQANSKTISTSDQMLQTLIQL 860


>gi|86146154|ref|ZP_01064480.1| polar flagellar FlgF [Vibrio sp. MED222]
 gi|218708805|ref|YP_002416426.1| flagellar basal body rod protein FlgF [Vibrio splendidus LGP32]
 gi|85836101|gb|EAQ54233.1| polar flagellar FlgF [Vibrio sp. MED222]
 gi|218321824|emb|CAV17794.1| Flagellar basal-body rod protein flgF [Vibrio splendidus LGP32]
          Length = 249

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN + E   + +  R +   ++ +  + +M  ++  LLR
Sbjct: 201 KGAIEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDSLLR 247


>gi|75675293|ref|YP_317714.1| hypothetical protein Nwi_1100 [Nitrobacter winogradskyi Nb-255]
 gi|74420163|gb|ABA04362.1| Protein of unknown function DUF1078 [Nitrobacter winogradskyi
          Nb-255]
          Length = 622

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L ++  IA SGL    A + I+S N+ANA T G       Y  +T+  ++V+ G  G  V
Sbjct: 3  LSSALSIAMSGLRANQAALSIVSGNVANANTPG-------YVAQTLVQDQVVTGGMGSGV 55

Query: 64 KKIGVDQS 71
          + IGV+++
Sbjct: 56 RVIGVNRT 63



 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E A++      Y AN   +     MM T + 
Sbjct: 582 SGVNMDTEMANLIALQNSYAANAHVMTVVQSMMQTLMQ 619


>gi|32477363|ref|NP_870357.1| FlgF [Rhodopirellula baltica SH 1]
 gi|32447914|emb|CAD77434.1| FlgF [Rhodopirellula baltica SH 1]
 gi|327537336|gb|EGF24069.1| Flagellar basal-body rod FlgF [Rhodopirellula baltica WH47]
          Length = 273

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 82  PVANAS---GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P ++ +   G ++   V+      +M ET+R Y AN+Q IK    ++ +   + R
Sbjct: 217 PDSDRNVVAGSLEQSAVSPTGTMMEMIETSRAYEANIQMIKNQDSVLGSL--IGR 269


>gi|39936960|ref|NP_949236.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           CGA009]
 gi|192292788|ref|YP_001993393.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           TIE-1]
 gi|39650817|emb|CAE29340.1| putative flagellar basal-body rod protein flgF [Rhodopseudomonas
           palustris CGA009]
 gi|192286537|gb|ACF02918.1| flagellar basal body rod protein [Rhodopseudomonas palustris TIE-1]
          Length = 253

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 78  DPGHPVANA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           D G P   +    G V+  NVN ++E   M +  R Y      ++Q  ++  T ++
Sbjct: 191 DQGTPDTKSMVRQGYVEKSNVNSVLEMTRMIDVTRTYTQISAMLQQESELRKTAIE 246


>gi|319787124|ref|YP_004146599.1| flagellar basal-body rod protein FlgB [Pseudoxanthomonas
          suwonensis 11-1]
 gi|317465636|gb|ADV27368.1| flagellar basal-body rod protein FlgB [Pseudoxanthomonas
          suwonensis 11-1]
          Length = 139

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 7/87 (8%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          + + +   +    L ++  RM++I+ N+ANA T G       Y+ + + F   +  +   
Sbjct: 3  NPISSYMGVHADALPLREQRMKLIASNLANADTPG-------YKAQDLDFNAALDAATRS 55

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASG 88
          R   +           +     A A+G
Sbjct: 56 RTGGVANGPGVPAATHESHLQDAIATG 82


>gi|118589967|ref|ZP_01547371.1| flagellar basal body FlaE [Stappia aggregata IAM 12614]
 gi|118437464|gb|EAV44101.1| flagellar basal body FlaE [Stappia aggregata IAM 12614]
          Length = 424

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV++  E   M E+ R Y AN Q  K   D++   ++L+R
Sbjct: 384 SNVDLGNELTSMIESQRTYTANSQVFKAGSDLLEQLVNLVR 424



 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          L        SG+  QS+++  ++ENI N+ TTG       Y+R    F  ++   G
Sbjct: 3  LFGVMRSGVSGMNAQSSKLGTVAENIMNSSTTG-------YKRAKSEFSSLVVSQG 51


>gi|32477362|ref|NP_870356.1| flagellar hook basal body protein flgG [Rhodopirellula baltica SH
           1]
 gi|32447913|emb|CAD77433.1| flagellar hook basal body protein flgG [Rhodopirellula baltica SH
           1]
 gi|327537337|gb|EGF24070.1| flagellar basal-body rod protein FlgG [Rhodopirellula baltica WH47]
          Length = 268

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV  + E  D+  T R +  N Q ++    +M     L R
Sbjct: 221 QGNLEASNVEPVQELIDLITTQRAFELNSQAVQAGDQVMQNISQLRR 267



 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 11 ANSGLAVQSARMQIISENIANARTTG 36
          A +G+     ++ +I+ N+AN  TTG
Sbjct: 9  AATGMEAMQTKLDVIANNLANINTTG 34


>gi|302343058|ref|YP_003807587.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
 gi|301639671|gb|ADK84993.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
          Length = 452

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +   V+   E  +M    R + A+ +T+  S +M+ T +++
Sbjct: 410 ETSTVDTATEMMNMIIYQRAFQASSKTVTTSDEMIKTAINM 450



 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          SGL   S  + I+++N+AN+ T G       Y+     F +V++
Sbjct: 11 SGLKSFSQGLNIVADNLANSNTYG-------YKSSRAEFADVLY 47


>gi|167465319|ref|ZP_02330408.1| Flagellar basal body protein [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 136

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 27/135 (20%)

Query: 1   MDYL-IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-- 57
           MD+L   S  +    L   + R ++I+ N+AN  T         ++R  + FEE++    
Sbjct: 1   MDFLNKPSLSLMERSLDASALRQRVIANNVANVDTPQ-------FKRSDVLFEELLQNEI 53

Query: 58  SGGVR-VKKIGVDQSTFVEEFDPG-----------HPVANASGIVKYPNVNVLVETADMR 105
           +G V+ ++    D   F     P            H   N +G     NV++  E A M 
Sbjct: 54  TGSVKPLEGYRTDPRHFKIG-QPSLPEGAQISTDEHTAMNNNGN----NVDMDYEMALMA 108

Query: 106 ETNRLYMANLQTIKQ 120
           +    Y   +Q +  
Sbjct: 109 KNQLKYNTLVQQMNA 123


>gi|94969957|ref|YP_592005.1| flagellar hook-associated protein [Candidatus Koribacter
          versatilis Ellin345]
 gi|94552007|gb|ABF41931.1| Flagellar hook-associated protein [Candidatus Koribacter
          versatilis Ellin345]
          Length = 458

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 7/60 (11%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  +  IA   +  +   MQ  + NIAN  T G       Y R+   F  V     G
Sbjct: 1  MASLSGTLSIATRAMLAEQGAMQATTNNIANVNTPG-------YSRQIPIFSAVDPVVSG 53


>gi|54307271|ref|YP_128291.1| FlgF flagellar basal-body rod protein [Photobacterium profundum
           SS9]
 gi|46911691|emb|CAG18489.1| Hypothetical FlgF flagellar basal-body rod protein [Photobacterium
           profundum SS9]
          Length = 244

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ASG ++  NVN +    +    +R +   ++ +K + D+ +    L+R
Sbjct: 195 ASGYIETSNVNAVESMINNMSLSRNFEFQIKMMKTAEDLASAGNRLVR 242


>gi|295707198|ref|YP_003600273.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium
           DSM 319]
 gi|294804857|gb|ADF41923.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium
           DSM 319]
          Length = 273

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  E  DM    R Y  N ++I  +  MM
Sbjct: 226 EQGKLEQSNVDLSKELTDMSIAQRAYQFNSRSISIADQMM 265


>gi|292670487|ref|ZP_06603913.1| flagellar basal body and hook protein [Selenomonas noxia ATCC
           43541]
 gi|292647897|gb|EFF65869.1| flagellar basal body and hook protein [Selenomonas noxia ATCC
           43541]
          Length = 506

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  + +DM  T R + +N + I    +M+ T +++ R
Sbjct: 464 EMSNVDIADQFSDMIITQRGFQSNSKVITVGDEMLETLINMKR 506



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M +I  NIAN  TTG       ++   ++FE+++  +
Sbjct: 1  MDVIGNNIANVNTTG-------FKAGRVTFEDMLSQT 30


>gi|163782129|ref|ZP_02177128.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159882661|gb|EDP76166.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 242

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN +VE   + ET+R +    + I+   ++      ++R
Sbjct: 196 QGFIELSNVNGIVEMVRLIETSRAHETYARLIQAVDEVQNRVNTIVR 242


>gi|320179224|gb|EFW54182.1| Flagellar hook protein FlgE [Shigella boydii ATCC 9905]
          Length = 389

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +G ++  NV++  E  +M    R Y +N QTIK 
Sbjct: 356 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 389



 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|118581848|ref|YP_903098.1| flagellar basal body rod protein [Pelobacter propionicus DSM 2379]
 gi|118504558|gb|ABL01041.1| flagellar basal body rod protein [Pelobacter propionicus DSM 2379]
          Length = 245

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 79  PGHPVANAS--------GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           P +P A           G ++  NV+ + E   M ET R + A  + IK   DM+   
Sbjct: 181 PANPQATPQAATGSIRQGQLEGSNVDTITEMVQMIETTRYFDACQRVIKGFDDMVGKA 238



 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + +  + A SG      RM  IS N+AN  T G       +++  + FE ++ G+ 
Sbjct: 1  MNSGMYAALSGSIAAMKRMDTISNNLANVNTPG-------FKKDKMLFESMLAGTS 49


>gi|291520177|emb|CBK75398.1| flagellar hook-associated protein FlgK [Butyrivibrio fibrisolvens
          16/4]
          Length = 494

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 1  MDYLIASAHIANSGL-AVQSARMQIISENIANARTTGDT 38
          M        IA SGL   Q+  +   + NI+N  TTG +
Sbjct: 1  MSSTFFGLTIAASGLNTAQAQ-INTTANNISNVNTTGYS 38


>gi|115523168|ref|YP_780079.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisA53]
 gi|115517115|gb|ABJ05099.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisA53]
          Length = 243

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 18/47 (38%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G V+  NV+ L+E   M    R +      I+ S   M   +  L
Sbjct: 191 QQGFVEGSNVDPLLELTQMMTAQRAFQGVSSLIEGSEGTMQNAIRTL 237



 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 13/64 (20%)

Query: 4  LIASAHIANSGLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          + ++ +++   L+ Q     R++ I+ N+AN +T         +R   + FE  M  +  
Sbjct: 1  MQSALYVS---LSAQVSLEKRLETIANNMANMKTAA-------FRADAVKFETAMSNAAS 50

Query: 61 VRVK 64
            V 
Sbjct: 51 KPVA 54


>gi|74101664|gb|AAZ99754.1| FlgKL [Aeromonas hydrophila]
          Length = 437

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 12/66 (18%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-----MHGSGGVR 62
           +I  SGL      + + ++NIAN  T G       Y R+      +     +    GV 
Sbjct: 2  LNIGFSGLNAAQIALNVTAQNIANVNTIG-------YSRQEAMMGSLSGFGRLDNGMGVE 54

Query: 63 VKKIGV 68
          V  +  
Sbjct: 55 VTGVRR 60



 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E   +    + Y AN + I  S  +  + L++
Sbjct: 398 SGVNTDEEGVKIMAYTKAYQANAKVISTSDQLFNSILNM 436


>gi|66046707|ref|YP_236548.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae
           B728a]
 gi|63257414|gb|AAY38510.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078:Flagellar basal body FlaE [Pseudomonas syringae
           pv. syringae B728a]
          Length = 442

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P +   G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 385 GAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 441



 Score = 37.2 bits (86), Expect = 0.67,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|20141426|sp|Q44335|FLGB_AGRT5 RecName: Full=Flagellar basal-body rod protein flgB
          Length = 134

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 49/119 (41%), Gaps = 18/119 (15%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGS----GGVRV--KKIGVDQ- 70
           S R ++++ NIANA T         +  K +S FE VM  +    G  R     +G    
Sbjct: 22  SVRQEVVATNIANANTPK-------FHAKDVSPFEAVMQATSQQVGMARTNPAHLGESTL 74

Query: 71  STFVEEFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           S  +   D  +PV N  G+ +  N V +  E     E  R Y  N   +K  H MM  T
Sbjct: 75  SENIAVRD--NPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLVKSFHRMMLMT 131


>gi|148258452|ref|YP_001243037.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium
          sp. BTAi1]
 gi|146410625|gb|ABQ39131.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium
          sp. BTAi1]
          Length = 246

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          I+ S L     R+ + + N+AN++TTG       YR K ++F+E +  
Sbjct: 8  ISLSRLMALQRRLDVAANNVANSQTTG-------YRAKQLAFQEYLKP 48


>gi|163789629|ref|ZP_02184067.1| flagellar hook-basal body complex protein [Carnobacterium sp. AT7]
 gi|159875161|gb|EDP69227.1| flagellar hook-basal body complex protein [Carnobacterium sp. AT7]
          Length = 252

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 21/42 (50%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV  + E  ++ + +R + AN + +  + + +   ++
Sbjct: 206 YLETSNVETVDEITNLMQVSRAFEANQKALSAADETLRKAVN 247


>gi|330972413|gb|EGH72479.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 442

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 80  GHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G P +   G +        NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 385 GAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 441



 Score = 37.2 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|331269279|ref|YP_004395771.1| flagellar hook-associated protein 1 [Clostridium botulinum
          BKT015925]
 gi|329125829|gb|AEB75774.1| flagellar hook-associated protein 1 [Clostridium botulinum
          BKT015925]
          Length = 647

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          M  L ++ ++   GL  Q   + + S NIAN+ T G T
Sbjct: 1  MSGLFSTLNVGKRGLYAQQGALDVTSHNIANSNTEGYT 38



 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ +    Y AN + I  +  ++   ++ L+
Sbjct: 606 SGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGLK 646


>gi|307293786|ref|ZP_07573630.1| flagellar basal-body rod protein FlgF [Sphingobium chlorophenolicum
           L-1]
 gi|306879937|gb|EFN11154.1| flagellar basal-body rod protein FlgF [Sphingobium chlorophenolicum
           L-1]
          Length = 246

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 79  PGHPVANASG-IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P  P+A+ +G  ++  NVN       M E +R +   ++ I  +  +      L+R
Sbjct: 189 PDDPLASVTGGSLEGSNVNATSALVQMIEASRAWETQVKMIDTAKQLDDGGASLMR 244


>gi|328545467|ref|YP_004305576.1| flagellar basal body rod protein [polymorphum gilvum SL003B-26A1]
 gi|326415208|gb|ADZ72271.1| Flagellar basal body rod protein [Polymorphum gilvum SL003B-26A1]
          Length = 241

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 10/54 (18%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           L+ Q   S R++ ++ N+AN  T G       YR   I F EV+  +G   V 
Sbjct: 8  ALSAQVSLSNRLETVARNVANMNTAG-------YRADEIKFAEVLSKAGADPVS 54



 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 15/44 (34%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G V+  N+N + E   +    R +      I+ S       + 
Sbjct: 192 QGYVEGANINPIRELTKLIMITRAFEGATSMIEASDRSQEQAIR 235


>gi|262173360|ref|ZP_06041037.1| flagellar hook-associated protein FlgK [Vibrio mimicus MB-451]
 gi|261890718|gb|EEY36705.1| flagellar hook-associated protein FlgK [Vibrio mimicus MB-451]
          Length = 457

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 16/80 (20%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG--------DTPGSDPYRRKTISFEEVMH 56
          +   +IA SGL      + + ++N+AN  T G         + G   Y        E   
Sbjct: 1  MNIVNIALSGLNANRVALDVTAQNVANINTPGFSRQQAIMTSVGGGKY--------ENHR 52

Query: 57 GSGGVRVKKIGVDQSTFVEE 76
             GV V  +      F+ +
Sbjct: 53 PGMGVEVNSVRRITDQFLVK 72



 Score = 33.7 bits (77), Expect = 9.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++      Y AN++ I  ++ +  + L L
Sbjct: 418 SAVNSDEEAANLMTFANAYNANMKVISTANQLFDSVLQL 456


>gi|91204384|emb|CAJ70884.1| strongly similar to flagellar hook protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 250

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A G ++  NVNV+ E  +M    R + +  ++    +D +   + L
Sbjct: 203 AQGYLEKSNVNVIDEMVNMIANMRSFQSGNKSTDSINDSLKKLIGL 248


>gi|333008278|gb|EGK27752.1| flagellar hook protein flgE [Shigella flexneri K-272]
 gi|333019768|gb|EGK39040.1| flagellar hook protein flgE [Shigella flexneri K-227]
          Length = 390

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +G ++  NV++  E  +M    R Y +N QTIK 
Sbjct: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390



 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|330875983|gb|EGH10132.1| flagellar hook protein FlgE [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 441

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 402 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 440



 Score = 37.6 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|300114799|ref|YP_003761374.1| fagellar hook-basal body protein [Nitrosococcus watsonii C-113]
 gi|299540736|gb|ADJ29053.1| fagellar hook-basal body protein [Nitrosococcus watsonii C-113]
          Length = 425

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +G ++  NV++  E   +    R + AN + I+ +  +  T +++
Sbjct: 379 QTGALESSNVDLTAELVHLITAQRNFQANAKAIETASTITDTIINI 424



 Score = 40.3 bits (94), Expect = 0.086,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          + + + SGL   S+ + + + NIANA TTG
Sbjct: 2  AFNTSLSGLNAASSDLDVTAHNIANASTTG 31


>gi|256830992|ref|YP_003159720.1| hypothetical protein Dbac_3229 [Desulfomicrobium baculatum DSM
           4028]
 gi|256580168|gb|ACU91304.1| protein of unknown function DUF1078 domain protein
           [Desulfomicrobium baculatum DSM 4028]
          Length = 123

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 47/116 (40%), Gaps = 17/116 (14%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
           + + N+AN  T G       +    + FE  ++G  GV+V+ +  + ++      P    
Sbjct: 17  VAANNVANMNTNG-------FHSSRVEFETGLNGQ-GVQVQDVYENTASGPLV--PSGEY 66

Query: 84  -ANASGI------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                G+      V+  N ++  E   M E+   + AN   +  S DM    ++++
Sbjct: 67  VETDEGLRYEEMLVEGSNTDLATEMVQMIESEHAFAANAAALHTSLDMTGVIINMM 122


>gi|118588735|ref|ZP_01546143.1| hypothetical protein SIAM614_18554 [Stappia aggregata IAM 12614]
 gi|118438721|gb|EAV45354.1| hypothetical protein SIAM614_18554 [Stappia aggregata IAM 12614]
          Length = 463

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 7/63 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SGLA Q+  ++ IS N+AN++TTG       Y+R   +F +++ G G  + 
Sbjct: 3  IYGAINSAVSGLAAQAKALENISGNVANSQTTG-------YKRLDTTFSDLVSGGGSKQA 55

Query: 64 KKI 66
          +++
Sbjct: 56 QQV 58



 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  N ++  E + +  T + Y AN + +  + +M+   L+++R
Sbjct: 420 VELSNADIADEFSKLIITQQAYSANSRIVTSADEMLDDALNMVR 463


>gi|52841457|ref|YP_095256.1| flagellar hook-associated protein FlgK [Legionella pneumophila
          subsp. pneumophila str. Philadelphia 1]
 gi|52628568|gb|AAU27309.1| flagellar hook associated protein 1 FlgK [Legionella pneumophila
          subsp. pneumophila str. Philadelphia 1]
          Length = 649

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 25/92 (27%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++  +IA SGL      + +   NIAN +T G       Y R++I F  +          
Sbjct: 1  MSILNIAYSGLNAFQRALDVTGNNIANFKTRG-------YSRQSIQFTPITSNRYAGSYI 53

Query: 58 SGGVRVKKI-----------GVDQSTFVEEFD 78
            GV V  I                ++  ++D
Sbjct: 54 GAGVSVASIYRNVDQFANAQVRSTLSYRTQYD 85


>gi|330721008|gb|EGG99169.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC2047]
          Length = 92

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E   +    R Y AN + I+    +    L +
Sbjct: 46  QSGALEESNVDLSAELVSLILAQRNYQANARAIETESAVTQAILQI 91


>gi|312882659|ref|ZP_07742396.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369620|gb|EFP97135.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 435

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  N+++  E  D+ +  R + AN + ++  +      L +
Sbjct: 390 SGTLEQANIDMTQELVDLIQAQRNFQANSRALEVHNTTQQNILQI 434



 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 6/78 (7%)

Query: 10 IANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          I+ SGL+     +   S NIANA T G        +D Y     +  +   G  GV+  K
Sbjct: 5  ISLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSIFTHAKTTPGQ-GVQASK 63

Query: 66 IGVDQSTFVEEFDPGHPV 83
          +          +   +P+
Sbjct: 64 VAQQFHEGSSIY-TNNPM 80


>gi|117926380|ref|YP_866997.1| flagellar basal body rod protein [Magnetococcus sp. MC-1]
 gi|117610136|gb|ABK45591.1| flagellar basal body rod protein [Magnetococcus sp. MC-1]
          Length = 269

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  N N +     M E  R Y  +++ I+   ++    +  + R
Sbjct: 219 QGFLEGSNSNPIRAMTQMIEAQRAYEMHIKMIQNLDNLDDQAVNRIGR 266



 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 7/40 (17%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           R+  ++ N+AN  TTG       Y+   ++FE  M   G
Sbjct: 17 LRLSTLANNLANVNTTG-------YKEDRLTFESFMTSPG 49


>gi|229121295|ref|ZP_04250526.1| Flagellar basal-body rod protein [Bacillus cereus 95/8201]
 gi|228662140|gb|EEL17749.1| Flagellar basal-body rod protein [Bacillus cereus 95/8201]
          Length = 135

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E ++ S  +        +            
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQINKSSALYKNNAADLKGNPDLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|223039214|ref|ZP_03609504.1| flagellar hook protein [Campylobacter rectus RM3267]
 gi|222879575|gb|EEF14666.1| flagellar hook protein [Campylobacter rectus RM3267]
          Length = 543

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++     ++  T + Y AN ++I  S++M+   ++L R
Sbjct: 501 EQSNVDLAQALTEIIVTQKAYDANAKSITTSNEMLQRAIELKR 543


>gi|307748584|gb|ADN91854.1| Hypothetical protein CJM1_1678 [Campylobacter jejuni subsp. jejuni
           M1]
          Length = 88

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    R Y AN +TI  S  M+ T + L
Sbjct: 46  EMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQL 86


>gi|294084412|ref|YP_003551170.1| flgK flagellar hook-associated protein 1 [Candidatus
          Puniceispirillum marinum IMCC1322]
 gi|292663985|gb|ADE39086.1| FlgK flagellar hook-associated protein 1 [Candidatus
          Puniceispirillum marinum IMCC1322]
          Length = 1402

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 18/83 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
          + +   I  SGL+     + +  +NIAN  T G       Y+R+  + EE+   +G    
Sbjct: 1  MASLFDIGKSGLSSYRQALAVTGQNIANINTDG-------YKRREANLEEIQGSTGSVNS 53

Query: 60 -------GVRVKKIGVDQSTFVE 75
                 GVRV  +      F+ 
Sbjct: 54 VPDQSGLGVRVTDVRRSFDEFLL 76



 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 19/39 (48%)

Query: 92   YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            Y  VN+  E + + E  + Y A+ + +  + ++  T + 
Sbjct: 1362 YSGVNLDTEASRLIEQQQAYQASARILSTARELFQTLMQ 1400


>gi|237751238|ref|ZP_04581718.1| flagellar basal-body rod protein [Helicobacter bilis ATCC 43879]
 gi|229372604|gb|EEO22995.1| flagellar basal-body rod protein [Helicobacter bilis ATCC 43879]
          Length = 132

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 31/141 (21%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS- 71
           S L  +S R  +I+ N+AN  T         YR + + FE+++      +  +I  ++S 
Sbjct: 3   SALDYRSLRQDLIASNMANVDT-------PFYRPRDVHFEDMLAE----KASQIFDNKSR 51

Query: 72  -------TFVEEFDPGHPVANA--------SGIVKYPN---VNVLVETADMRETNRLYMA 113
                    + +  P   +A+          G +   +   V++ VET++M + + +Y A
Sbjct: 52  AETLKLTQALPQHLPSG-LADPLTGSLFFRDGHLARNDGNSVDLDVETSEMGKNSVMYQA 110

Query: 114 NLQTIKQSHDMMTTTLDLLRD 134
               +K+   +    L+  ++
Sbjct: 111 LTSALKKHKGIFAYALESSKN 131


>gi|118477179|ref|YP_894330.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis str.
           Al Hakam]
 gi|118416404|gb|ABK84823.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 138

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 23  NTVSSNIANANTPG-------YKAQDVTFAEQMNISSALYKNNAADLKSNPDLYQTNEMH 75

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 76  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 131

Query: 125 MTTT 128
               
Sbjct: 132 NQAA 135


>gi|147678427|ref|YP_001212642.1| flagellar basal body protein [Pelotomaculum thermopropionicum SI]
 gi|146274524|dbj|BAF60273.1| flagellar basal body protein [Pelotomaculum thermopropionicum SI]
          Length = 133

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 22/111 (19%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD---- 69
           GL   + R ++I+ NIANA T G       +++  + FE +   + G     + V     
Sbjct: 13  GLDAAALRHRVIANNIANANTPG-------FKKSAVEFESLFKEALGRNPVGMAVTHPRH 65

Query: 70  --QSTFVEEFDPGHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMA 113
             ++  + E  P   + NA      G     NV++  E  ++   +  Y A
Sbjct: 66  MGKAPLLSELQPVEKINNATSMRTDGN----NVDIDEEMVNLAANDIHYQA 112


>gi|304321132|ref|YP_003854775.1| flagellar basal-body rod protein FlgF [Parvularcula bermudensis
           HTCC2503]
 gi|303300034|gb|ADM09633.1| flagellar basal-body rod protein FlgF [Parvularcula bermudensis
           HTCC2503]
          Length = 238

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 8/60 (13%)

Query: 82  PVANA--------SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P  +A         G ++  NV  + E A +    R+Y A  +   Q H+ ++T +D +R
Sbjct: 176 PDGDAVFEEGRVLQGFIEGSNVQPVAEFAKLMLAQRMYEAGQKMADQEHERLSTLIDAMR 235


>gi|298529920|ref|ZP_07017322.1| flagellar hook-associated protein FlgK [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509294|gb|EFI33198.1| flagellar hook-associated protein FlgK [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 701

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +   VN+  E +++ +    Y A  + I  +  MM T L L
Sbjct: 659 EKSGVNLDEEMSNLIKYQHSYQAAARMISTADQMMQTLLGL 699



 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 7/55 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M  + A  +   + L    + +Q    NIAN  T G       YRR+ +  EE M
Sbjct: 1  MSGIHALMNSGRTALFANQSAIQTTGNNIANVNTEG-------YRRREVRLEEAM 48


>gi|148358806|ref|YP_001250013.1| flagellar hook protein FlgE [Legionella pneumophila str. Corby]
 gi|296106851|ref|YP_003618551.1| flagellar hook protein FlgE [Legionella pneumophila 2300/99 Alcoy]
 gi|148280579|gb|ABQ54667.1| flagellar hook protein FlgE [Legionella pneumophila str. Corby]
 gi|295648752|gb|ADG24599.1| flagellar hook protein FlgE [Legionella pneumophila 2300/99 Alcoy]
          Length = 437

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E   +    R + AN QTI+    +  T +++
Sbjct: 392 SGRLEESNVDLTGELVKLISAQRNFQANAQTIRTGDAITQTIINI 436


>gi|54294163|ref|YP_126578.1| flagellar hook protein FlgE [Legionella pneumophila str. Lens]
 gi|53753995|emb|CAH15466.1| Flagellar hook protein FlgE [Legionella pneumophila str. Lens]
 gi|307609977|emb|CBW99506.1| flagellar hook protein FlgE [Legionella pneumophila 130b]
          Length = 437

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E   +    R + AN QTI+    +  T +++
Sbjct: 392 SGRLEESNVDLTGELVKLISAQRNFQANAQTIRTGDAITQTIINI 436


>gi|330967090|gb|EGH67350.1| flagellar hook protein FlgE [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 441

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 402 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 440



 Score = 37.6 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|229592130|ref|YP_002874249.1| flagellar hook protein FlgE [Pseudomonas fluorescens SBW25]
 gi|229363996|emb|CAY51545.1| putative flagellar hook protein [Pseudomonas fluorescens SBW25]
          Length = 434

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVN+  E  D+ +    Y AN +TI     +M T + +
Sbjct: 395 SNVNLTNELVDLIKAQSNYQANAKTISTQSTIMQTIIQM 433



 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   + ++ +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVATTG 31


>gi|126697816|ref|YP_001086713.1| flagellar basal-body rod protein [Clostridium difficile 630]
 gi|115249253|emb|CAJ67066.1| Flagellar basal-body rod protein FlgB [Clostridium difficile]
          Length = 105

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 25/126 (19%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +  I   GL   + R Q I+ NIAN  T G       Y+R  I+FEE ++ +    + 
Sbjct: 1   MNTYDIIKMGLDATNLRSQTIANNIANINTEG-------YKRHYITFEETLNDA----MP 49

Query: 65  KIGVDQSTFVEEFDPGHPVANASGI-VKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           KI                  N+ G+ V   NV++  E  +   T   Y A +        
Sbjct: 50  KIEEKTD-------------NSKGLRVDGNNVDIEEEKVNQAMTTLQYNALISFANGKIA 96

Query: 124 MMTTTL 129
           M  + +
Sbjct: 97  MTKSII 102


>gi|56460252|ref|YP_155533.1| flagellar hook protein FlgE [Idiomarina loihiensis L2TR]
 gi|56179262|gb|AAV81984.1| Flagellar hook protein FlgE [Idiomarina loihiensis L2TR]
          Length = 449

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVN+  E  D+    R + AN ++++ ++ +  T L +
Sbjct: 410 SNVNLTKELVDLITAQRNFQANSRSLEVNNTINQTILQI 448



 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S  IA SG+      + + + NI+N +T+G
Sbjct: 2  SFKIALSGINASQKDLDVTANNISNVKTSG 31


>gi|170022971|ref|YP_001719476.1| flagellar basal body rod protein [Yersinia pseudotuberculosis
          YPIII]
 gi|169749505|gb|ACA67023.1| flagellar basal body rod protein [Yersinia pseudotuberculosis
          YPIII]
          Length = 102

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 9/62 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S  IAN+ L   + ++  IS NIAN+ T G       ++     F  +   S   GV V 
Sbjct: 2  SFSIANTALNAHTEQLNTISNNIANSATKG-------FKASRTEFSSMYAQSQPLGVAVS 54

Query: 65 KI 66
           +
Sbjct: 55 GV 56


>gi|23100412|ref|NP_693879.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831]
 gi|22778645|dbj|BAC14913.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831]
          Length = 269

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  NVN +    DM    RL+  N + ++   + +  T+ ++ R
Sbjct: 219 QQGALEQSNVNTMQTMTDMMNAYRLFETNQRVLRAYDESLGKTVNEIGR 267



 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++   + A SG+  Q  + + +S NIANA T G        R     F E++    G
Sbjct: 1  MLRGLYTAASGMITQQRQQESLSNNIANANTPGYKADQTTIRA----FPELLLQQTG 53


>gi|285018209|ref|YP_003375920.1| flagellar hook protein flge [Xanthomonas albilineans GPE PC73]
 gi|283473427|emb|CBA15932.1| probable flagellar hook protein flge [Xanthomonas albilineans]
          Length = 407

 Score = 43.8 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++   V++  +  +M    R + AN Q I     +  T +++
Sbjct: 361 QSGALESSTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTVINI 406



 Score = 40.3 bits (94), Expect = 0.087,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 17/71 (23%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------- 59
           + + SG+   +  + + + NIAN  TTG       ++     F +    SG        
Sbjct: 3  FNTSLSGIKAANTDLNVTANNIANVNTTG-------FKSSRAEFADQFTVSGYGLARNAV 55

Query: 60 --GVRVKKIGV 68
            GVRV  +  
Sbjct: 56 GSGVRVSNVAQ 66


>gi|75761145|ref|ZP_00741137.1| Flagellar basal-body rod protein flgB [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228900325|ref|ZP_04064555.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 4222]
 gi|74491373|gb|EAO54597.1| Flagellar basal-body rod protein flgB [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228859360|gb|EEN03790.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 4222]
          Length = 138

 Score = 43.4 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 31/125 (24%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG-- 80
             +S NIANA T G       Y+ + ++F E M+ S  +        +S     +     
Sbjct: 23  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDL-YQTNEM 74

Query: 81  --------HPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                   +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + 
Sbjct: 75  HLPTVNMKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYA 130

Query: 124 MMTTT 128
           +    
Sbjct: 131 INQAA 135


>gi|242309753|ref|ZP_04808908.1| flagellar basal-body rod protein flgg [Helicobacter pullorum MIT
          98-5489]
 gi|239523754|gb|EEQ63620.1| flagellar basal-body rod protein flgg [Helicobacter pullorum MIT
          98-5489]
          Length = 277

 Score = 43.4 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          G+  Q  R+ +I+ NIANA TTG       ++R  + 
Sbjct: 11 GMVTQINRLDVIANNIANANTTG-------FKRDDVV 40



 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           A   G ++  N+NV+ E   + ETNRL  A  + +K 
Sbjct: 224 AVRQGFLEKSNINVVYEMTGLIETNRLVEAYSKVLKT 260


>gi|156976147|ref|YP_001447053.1| flagellar hook-associated protein [Vibrio harveyi ATCC BAA-1116]
 gi|156527741|gb|ABU72826.1| hypothetical protein VIBHAR_04918 [Vibrio harveyi ATCC BAA-1116]
          Length = 457

 Score = 43.4 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 16/90 (17%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SGGV 61
          +IA SGL      + + ++N+AN  T G       Y R+      V  G         GV
Sbjct: 5  NIALSGLNANRVALDVTAQNVANIITPG-------YSRQQALMTSVGDGKYNKLSPGMGV 57

Query: 62 RVKKIGVDQSTF--VEEFDPGHPVANASGI 89
           V  I      F   + +      A ++G 
Sbjct: 58 EVTSIRRVTDQFLVKQTWSTNSLAAYSAGY 87


>gi|294013083|ref|YP_003546543.1| flagellar basal-body rod protein FlgB [Sphingobium japonicum
          UT26S]
 gi|292676413|dbj|BAI97931.1| flagellar basal-body rod protein FlgB [Sphingobium japonicum
          UT26S]
          Length = 122

 Score = 43.4 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 17/82 (20%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I    LA++S R+ +++ NIANA     TPG   Y+ + I FE  +  +      + G
Sbjct: 8  FGIHGKALALRSQRLSLLASNIANA----STPG---YKARDIDFESALKEA----TTRQG 56

Query: 68 VDQSTFVEEFDPGHPVANASGI 89
             +   +  D      +A G 
Sbjct: 57 KSPADVSQAVD------DAMGY 72


>gi|332799170|ref|YP_004460669.1| flagellar basal-body rod protein FlgB [Tepidanaerobacter sp. Re1]
 gi|332696905|gb|AEE91362.1| flagellar basal-body rod protein FlgB [Tepidanaerobacter sp. Re1]
          Length = 134

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 27/138 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L ++  +    L V+  R ++IS N+AN  T G       Y+R  +SFEE++  S  
Sbjct: 1   MTDLFSNIDVMEKLLDVKLKRYELISNNLANVDTPG-------YKRMGMSFEEILMNSLN 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVK----YP------NVNVLVETADMRETNRL 110
            R   +    +T  +  DP   + +    +     Y       NV++  E  +M + N  
Sbjct: 54  QRTIPLA---ATNDKHIDPRKKLEDIKPKIYRQEDYSFRNDENNVDIDKEMVEMIKNNFS 110

Query: 111 YM-------ANLQTIKQS 121
           Y         NL+ ++ +
Sbjct: 111 YNIISDQIITNLKILQTA 128


>gi|312115252|ref|YP_004012848.1| flagellar basal body rod protein [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220381|gb|ADP71749.1| flagellar basal body rod protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 124

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 24/135 (17%)

Query: 4   LIASAHIANSGLAVQSARM----QIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGS 58
           +     IA    ++Q   +    +++++N+ANA T G       Y+   I  FE VMH  
Sbjct: 1   MTNVLDIA----SLQGRWLFAKERVLAQNVANANTPG-------YKAANIVPFEAVMHD- 48

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVA--NASG---IVKYPNVNVLVETADMRETNRLYMA 113
             +R++           E       A  +A+G        +VN+  E     E  R Y  
Sbjct: 49  --IRLQMTSTSPMHLRAEVSQISSTAQEDAAGGETFYSGGDVNLDQEMLKSSEVMRDYAL 106

Query: 114 NLQTIKQSHDMMTTT 128
           N   +K  H M++  
Sbjct: 107 NASVVKTFHSMISQA 121


>gi|182418344|ref|ZP_02949639.1| flagellar hook-associated protein FlgK [Clostridium butyricum
          5521]
 gi|237666652|ref|ZP_04526637.1| flagellar hook-associated protein FlgK [Clostridium butyricum E4
          str. BoNT E BL5262]
 gi|182377726|gb|EDT75270.1| flagellar hook-associated protein FlgK [Clostridium butyricum
          5521]
 gi|237657851|gb|EEP55406.1| flagellar hook-associated protein FlgK [Clostridium butyricum E4
          str. BoNT E BL5262]
          Length = 610

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 12/72 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
          M  L  +  +A  GL+VQ   +   S N+AN++T G       Y R+    E      G 
Sbjct: 1  MAGLFDTFTVAKRGLSVQQGNINTTSHNLANSQTAG-------YSRQRAVVETTRPFGGL 53

Query: 60 ----GVRVKKIG 67
              GV   +IG
Sbjct: 54 SKFDGVSYGQIG 65



 Score = 41.5 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E AD+ +    Y AN + I    +++   ++ L+
Sbjct: 569 SGVSLDEEMADLIQFQHSYQANAKMINTVDELLDVVINGLK 609


>gi|224417700|ref|ZP_03655706.1| flagellar basal-body rod protein FlgG [Helicobacter canadensis
          MIT 98-5491]
 gi|253827049|ref|ZP_04869934.1| flagellar distal rod protein FlgF [Helicobacter canadensis MIT
          98-5491]
 gi|313141243|ref|ZP_07803436.1| flagellar basal-body rod protein flgg [Helicobacter canadensis
          MIT 98-5491]
 gi|253510455|gb|EES89114.1| flagellar distal rod protein FlgF [Helicobacter canadensis MIT
          98-5491]
 gi|313130274|gb|EFR47891.1| flagellar basal-body rod protein flgg [Helicobacter canadensis
          MIT 98-5491]
          Length = 277

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          G+  Q  R+ +I+ NIANA TTG       ++R  + 
Sbjct: 11 GMVTQINRLDVIANNIANANTTG-------FKRDDVV 40



 Score = 38.4 bits (89), Expect = 0.36,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           A   G ++  N+NV+ E   + ETNRL  A  + +K 
Sbjct: 224 AVRQGYLEKSNINVVYEMTGLIETNRLVEAYSKVLKT 260


>gi|170748127|ref|YP_001754387.1| flagellar basal body rod protein [Methylobacterium radiotolerans
          JCM 2831]
 gi|170654649|gb|ACB23704.1| flagellar basal body rod protein [Methylobacterium radiotolerans
          JCM 2831]
          Length = 246

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + +S ++  S       R+  ++ N+AN  T G       YR + + FE ++  +G
Sbjct: 1  MQSSLYVTLSAQMALEQRLNTVAANVANLGTVG-------YRAEEVKFETILSQAG 49



 Score = 33.4 bits (76), Expect = 9.9,   Method: Composition-based stats.
 Identities = 7/27 (25%), Positives = 13/27 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYM 112
             G  +  NVN ++E + + E  R + 
Sbjct: 196 QQGFQEGANVNPVMEMSRLIEITRAFQ 222


>gi|146305250|ref|YP_001185715.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
          mendocina ymp]
 gi|145573451|gb|ABP82983.1| flagellar basal body FlaE domain protein [Pseudomonas mendocina
          ymp]
          Length = 395

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S +IA +GL+  + ++  IS NIANA TTG       ++     F  +   S  + V+ +
Sbjct: 2  SFNIAMTGLSAVNEQLNTISHNIANAGTTG-------FKSSRTEFGSIYADSQAMGVEVL 54

Query: 67 GVDQS 71
             QS
Sbjct: 55 ATTQS 59



 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +G ++  NV++  +   + E  R Y AN + +  + ++  
Sbjct: 350 AGSLENSNVDLTQQLVGLMEGQRNYQANTKVLTTNKELTQ 389


>gi|304438469|ref|ZP_07398409.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368552|gb|EFM22237.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 139

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 26/109 (23%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             +++  +A  + R +++S NIAN  T         ++R  + FE+++    G     + 
Sbjct: 11  IDVSSRAMAASTLRHEVLSNNIANVNTPN-------FKRSHVRFEDLLKKELG-----LE 58

Query: 68  VDQS-TFVEEFDPGHPVA---NASGIVKYP----------NVNVLVETA 102
            D     V   D   P+A    A G+++            NV++ VE A
Sbjct: 59  DDPLMPVVRTHDRHLPLAYRGKAHGVIEQENTTNMRLDGNNVDIDVEMA 107


>gi|224373490|ref|YP_002607862.1| flagellar hook-associated protein FlgK [Nautilia profundicola AmH]
 gi|223589300|gb|ACM93036.1| flagellar hook-associated protein FlgK [Nautilia profundicola AmH]
          Length = 727

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                 VN+  E  ++ +  R Y AN + I   + M+     +
Sbjct: 683 YYSLSGVNIDEELVNLEQYQRGYQANAKVITTINQMLDALFSI 725



 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 14/77 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          +  S   A +GL      + + S NI+NA      P    Y R+   F  +         
Sbjct: 3  ISTSFSTALTGLKAHQTAIDVTSNNISNA----SNPD---YVRERAVFSTLNPINSIPGD 55

Query: 57 GSGGVRVKKIGVDQSTF 73
             GV++  I     TF
Sbjct: 56 IGTGVQISSIYRITDTF 72


>gi|52082162|ref|YP_080953.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
           14580]
 gi|52787554|ref|YP_093383.1| FlhO [Bacillus licheniformis ATCC 14580]
 gi|319648039|ref|ZP_08002256.1| FlhO protein [Bacillus sp. BT1B_CT2]
 gi|52005373|gb|AAU25315.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
           14580]
 gi|52350056|gb|AAU42690.1| FlhO [Bacillus licheniformis ATCC 14580]
 gi|317389674|gb|EFV70484.1| FlhO protein [Bacillus sp. BT1B_CT2]
          Length = 279

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
             G+ +  NV+V     +M    R + AN + ++     M     ++ R
Sbjct: 229 KQGMTERSNVDVTRAYTEMTAAYRSFEANQKVLQAYDKSMEKAANEIGR 277



 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++   + A S +  Q  R ++++ NIANA T G      
Sbjct: 1  MLKGLYTATSAMITQQRRTEMLTNNIANANTPGYKEDQG 39


>gi|332704824|ref|ZP_08424912.1| flagellar basal-body rod protein FlgF [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554973|gb|EGJ52017.1| flagellar basal-body rod protein FlgF [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 277

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             G ++  NV ++ E   M E NR++ A  + ++ + DM ++ +
Sbjct: 227 QQGFLESSNVEIVTEMVRMIEVNRVFEAYQKIMRGTQDMDSSLI 270



 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 21 RMQIISENIANARTTGDTPGSDPYRRKTISFE 52
          RM IIS N+AN  TTG    S  ++   + F 
Sbjct: 18 RMNIISNNLANVSTTGYKTDSVTFKDVFVPFA 49


>gi|328958263|ref|YP_004375649.1| flagellar basal-body rod protein FlgG [Carnobacterium sp. 17-4]
 gi|328674587|gb|AEB30633.1| flagellar basal-body rod protein FlgG [Carnobacterium sp. 17-4]
          Length = 240

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 18/38 (47%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            ++  NV++     +M    R Y  NL+  + + +M +
Sbjct: 196 YLEASNVDLASSITEMMLAQRSYSLNLKVAQGTDEMAS 233


>gi|327398496|ref|YP_004339365.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
 gi|327181125|gb|AEA33306.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
          Length = 589

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 7/57 (12%)

Query: 84  ANASG-------IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           AN  G        ++  NV++     ++ E  R + AN + +  +  ++ T + L R
Sbjct: 533 ANEGGRGMILSNHLEASNVDLGEAFVNLIEYQRGFEANSKGVTTADQLLQTAIQLKR 589



 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          +I + + +++GL  Q   +  I+ NIAN  T G       Y++   +F  +++ + 
Sbjct: 1  MIRALYTSSNGLFEQQLGVDSITNNIANVNTIG-------YKKTRPTFASLLYQTQ 49


>gi|254508430|ref|ZP_05120550.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus 16]
 gi|219548640|gb|EED25645.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus 16]
          Length = 249

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 78  DPGHPV-ANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           DP     A+A     +G ++  NVN + E   + +  R +   ++ +  + +M  ++  L
Sbjct: 186 DPNAAYEADAGVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|315301940|ref|ZP_07872942.1| flagellar basal-body rod protein FlgG [Listeria ivanovii FSL
          F6-596]
 gi|313629693|gb|EFR97824.1| flagellar basal-body rod protein FlgG [Listeria ivanovii FSL
          F6-596]
          Length = 74

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KK 65
            
Sbjct: 54 AG 55


>gi|260574380|ref|ZP_05842384.1| protein of unknown function DUF1078 domain protein [Rhodobacter sp.
           SW2]
 gi|259023276|gb|EEW26568.1| protein of unknown function DUF1078 domain protein [Rhodobacter sp.
           SW2]
          Length = 435

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E  ++ +T R Y +N + I+   +M+  T ++ R
Sbjct: 398 DVAAELTNLIQTQRAYSSNAKVIQTVDEMLQETTNIKR 435



 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 16/70 (22%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          + ++     +GL   + R+  IS+NIAN+ T G       Y+R +  FE ++        
Sbjct: 3  ISSALSAGVAGLNANATRLASISDNIANSGTYG-------YKRASTDFESMVITQAAGAG 55

Query: 56 -HGSGGVRVK 64
           + +GGVR  
Sbjct: 56 TYSAGGVRAS 65


>gi|168187526|ref|ZP_02622161.1| flagellar hook-associated protein FlgK [Clostridium botulinum C
          str. Eklund]
 gi|169294577|gb|EDS76710.1| flagellar hook-associated protein FlgK [Clostridium botulinum C
          str. Eklund]
          Length = 678

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          M  L ++ ++   GL  Q   + + S NIAN+ T G T
Sbjct: 1  MSGLFSTLNVGKRGLYAQQGALDVTSHNIANSNTKGYT 38



 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ +    Y AN + I  +  ++   ++ L+
Sbjct: 637 SGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGLK 677


>gi|218896676|ref|YP_002445087.1| flagellar basal-body rod protein FlgB [Bacillus cereus G9842]
 gi|218543629|gb|ACK96023.1| flagellar basal-body rod protein FlgB [Bacillus cereus G9842]
          Length = 135

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 31/125 (24%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG-- 80
             +S NIANA T G       Y+ + ++F E M+ S  +        +S     +     
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDL-YQTNEM 71

Query: 81  --------HPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                   +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + 
Sbjct: 72  HLPTVNMKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYA 127

Query: 124 MMTTT 128
           +    
Sbjct: 128 INQAA 132


>gi|229132556|ref|ZP_04261405.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST196]
 gi|228650902|gb|EEL06888.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST196]
          Length = 161

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +  K     +S           
Sbjct: 46  NTVSSNIANANTPG-------YKAQDVTFAEQMNMSSALYKKNTADLKSNPDLYQTNVMH 98

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ +TN+LY  ++  I   + +
Sbjct: 99  LPTANTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKTNQLYGVSINAINTQYAI 154

Query: 125 MTTT 128
               
Sbjct: 155 NQAA 158


>gi|229195956|ref|ZP_04322709.1| Flagellar basal-body rod protein [Bacillus cereus m1293]
 gi|228587515|gb|EEK45580.1| Flagellar basal-body rod protein [Bacillus cereus m1293]
          Length = 135

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 31/125 (24%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG-- 80
             +S NIANA T G       Y+ + ++F E M+ S  +  K    D  T  + +     
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALY-KSNTADLKTNADLYQTNEM 71

Query: 81  --------HPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                   +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + 
Sbjct: 72  HLPTVNAKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYA 127

Query: 124 MMTTT 128
           +    
Sbjct: 128 INQAA 132


>gi|152965613|ref|YP_001361397.1| flagellar basal-body rod protein FlgB [Kineococcus radiotolerans
           SRS30216]
 gi|151360130|gb|ABS03133.1| flagellar basal-body rod protein FlgB [Kineococcus radiotolerans
           SRS30216]
          Length = 116

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 51/136 (37%), Gaps = 30/136 (22%)

Query: 1   MDYLIA-SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS- 58
           M  L + + H A +GL     R + I++NI+N  T G       Y    ++FE  +  + 
Sbjct: 1   MSDLTSVALHTALNGLQA---RQRAIADNISNINTPG-------YLANKVAFENELKSAV 50

Query: 59  -----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                G   V  I   +S      +P     N        NVN+  ET     TN  Y  
Sbjct: 51  ATGDAGAAAVSGIATQKS-----LEPTREDGN--------NVNLDEETISGISTNLSYQT 97

Query: 114 NLQTIKQSHDMMTTTL 129
            L  +   + M+ T +
Sbjct: 98  VLSALNSKYSMLRTAM 113


>gi|294675565|ref|YP_003576180.1| flagellar hook-associated protein FlgK [Rhodobacter capsulatus SB
          1003]
 gi|294474385|gb|ADE83773.1| flagellar hook-associated protein FlgK [Rhodobacter capsulatus SB
          1003]
          Length = 484

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRV 63
          ++ + A SGL   S + +++S NIANA T G       Y R+ +S      G   GGVR+
Sbjct: 5  SAFNFAISGLTASSRKAEVVSSNIANAMTEG-------YARRELSIASQTLGGTGGGVRI 57

Query: 64 KKI 66
            +
Sbjct: 58 LGV 60



 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+   E   +    + Y AN + ++    M+   LD+
Sbjct: 448 VDTDYEMQSLLVIEKAYAANAKVVQTIDAMLQELLDI 484


>gi|330501137|ref|YP_004378006.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
          mendocina NK-01]
 gi|328915423|gb|AEB56254.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
          mendocina NK-01]
          Length = 395

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S +IA +GL+  + ++  IS NIANA TTG       ++     F  +   S  + V+ +
Sbjct: 2  SFNIAMTGLSAVNEQLNTISHNIANAGTTG-------FKSSRTEFGSIYADSQAMGVEVL 54

Query: 67 GVDQS 71
             QS
Sbjct: 55 ATTQS 59



 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +G ++  NV++  +   + E  R Y AN + +  + ++  
Sbjct: 350 AGSLENSNVDLTQQLVGLMEGQRNYQANTKVLTTNKELTQ 389


>gi|89092137|ref|ZP_01165092.1| flagellar basal-body rod protein FlgF [Oceanospirillum sp. MED92]
 gi|89083872|gb|EAR63089.1| flagellar basal-body rod protein FlgF [Oceanospirillum sp. MED92]
          Length = 247

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  DQ       +P   V   SG ++  NVN + E   +  ++R +   ++ +K + +  
Sbjct: 182 ITGDQVPL----EPDPAVQVRSGYLEASNVNAVSELTGIITSSRQFEMQIKMMKTAEENS 237

Query: 126 TTTLDLLR 133
            +   +LR
Sbjct: 238 ESAAAILR 245


>gi|323703190|ref|ZP_08114843.1| flagellar basal-body rod protein FlgF [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531849|gb|EGB21735.1| flagellar basal-body rod protein FlgF [Desulfotomaculum nigrificans
           DSM 574]
          Length = 257

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 26/45 (57%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           + G ++  NV+ + E  ++    R+Y ++ + ++ S +++  +++
Sbjct: 207 SQGWLEKANVDPVQEMINIIPATRIYESSQRLVQISDELLDKSIN 251


>gi|323697471|ref|ZP_08109383.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
 gi|323457403|gb|EGB13268.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
           ND132]
          Length = 258

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           A G ++  NV V+ E   M ET R +    + I+   D+ +  ++
Sbjct: 207 AQGFIEKSNVEVVTEMVSMIETQRAFTMYTKMIQGDSDLDSKLIN 251


>gi|322382306|ref|ZP_08056213.1| flagellar basal body rod protein FlgB-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321153659|gb|EFX46034.1| flagellar basal body rod protein FlgB-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 137

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 27/135 (20%)

Query: 1   MDYL-IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-- 57
           MD+L   S  +    L   + R ++I+ N+AN  T         ++R  + FEE++    
Sbjct: 2   MDFLNKPSLSLMERSLDASALRQRVIANNVANVDTPQ-------FKRSDVLFEELLQNEI 54

Query: 58  SGGVR-VKKIGVDQSTFVEEFDPG-----------HPVANASGIVKYPNVNVLVETADMR 105
           +G V+ ++    D   F     P            H   N +G     NV++  E A M 
Sbjct: 55  TGSVKPLEGYRTDPRHFKIG-QPSLPEGAQISTDEHTAMNNNGN----NVDMDYEMALMA 109

Query: 106 ETNRLYMANLQTIKQ 120
           +    Y   +Q +  
Sbjct: 110 KNQLKYNTLVQQMNA 124


>gi|307293790|ref|ZP_07573634.1| flagellar basal-body rod protein FlgB [Sphingobium
          chlorophenolicum L-1]
 gi|306879941|gb|EFN11158.1| flagellar basal-body rod protein FlgB [Sphingobium
          chlorophenolicum L-1]
          Length = 122

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 13/68 (19%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------HGSGGV 61
            I    LA++S R+ +++ NIANA     TPG   Y+ + I FE  +       G    
Sbjct: 8  FGIHGKALALRSQRLSLLASNIANA----STPG---YKARDIDFESALKEATSRQGKSAA 60

Query: 62 RVKKIGVD 69
           V +   D
Sbjct: 61 DVSQAVDD 68


>gi|269836597|ref|YP_003318825.1| hypothetical protein Sthe_0565 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785860|gb|ACZ38003.1| protein of unknown function DUF1078 domain protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 259

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 5/54 (9%)

Query: 82  PVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           P A+      SG ++   V++  +   + E  R Y  N + ++   +M+   + 
Sbjct: 203 PGADGFPALQSGALEASTVDLAEQMTTLIEAQRAYTVNARALQTLDEMVGLAIQ 256



 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 17/81 (20%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--------SFEEVMHGSGGVRV 63
           +GL VQ AR+  ++ N+AN  TTG       ++   +          E    G     V
Sbjct: 9  ANGLRVQQARLDAVANNVANLGTTG-------FKAARVDMVDMPPQPLEVARAGGAADPV 61

Query: 64 KKIGVDQS--TFVEEFDPGHP 82
           +IG   +       F+PG P
Sbjct: 62 TEIGEGVTIGGISRVFEPGTP 82


>gi|87119676|ref|ZP_01075573.1| hypothetical protein MED121_07045 [Marinomonas sp. MED121]
 gi|86165152|gb|EAQ66420.1| hypothetical protein MED121_07045 [Marinomonas sp. MED121]
          Length = 565

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E   + E  R Y AN +T++  + +  T ++L
Sbjct: 526 SNVDLTSELVALIEAQRNYQANSKTLETENTVTQTIINL 564


>gi|332187894|ref|ZP_08389627.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
 gi|332012055|gb|EGI54127.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
          Length = 251

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NVN+     DM E  R Y      +K++  M   +  L+R
Sbjct: 201 QSGALEGSNVNMAQTLVDMIENQRSYEVQANLMKEAKSMDENSASLMR 248



 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 18/64 (28%)

Query: 1  MDYLIASAHIANSGL----AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          MD L+ +   A +G+    A QS     I+ N+ANA T G       +R   + F+ +  
Sbjct: 1  MDKLVYT---AATGMRSHMAAQS----AIANNMANASTIG-------FRADRVVFDRIDL 46

Query: 57 GSGG 60
            GG
Sbjct: 47 KGGG 50


>gi|238028849|ref|YP_002913080.1| flagellar hook protein FlgE [Burkholderia glumae BGR1]
 gi|237878043|gb|ACR30376.1| Hypothetical protein bglu_1g33140 [Burkholderia glumae BGR1]
          Length = 412

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    R Y AN QTIK    +  T L+L
Sbjct: 374 STVDLTGELVNLITAQRNYQANAQTIKTQQTVDQTLLNL 412



 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 8/57 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-HGSGGVRVKKIGV 68
          SGL   S+ + +I  NIANA T G       ++  +  F ++  +   G     IG+
Sbjct: 8  SGLQGASSDLDVIGNNIANANTVG-------FKAASAQFSDLYANSVSGAVANGIGI 57


>gi|118444348|ref|YP_877945.1| flagellar hook-associated protein 1 [Clostridium novyi NT]
 gi|118134804|gb|ABK61848.1| flagellar hook-associated protein 1 [Clostridium novyi NT]
          Length = 676

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          M  L ++ ++   GL  Q   + + S NIAN+ T G T
Sbjct: 1  MSGLFSTLNVGKRGLYAQQGALDVTSHNIANSNTKGYT 38



 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ +    Y AN + I  +  ++   ++ L+
Sbjct: 635 SGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGLK 675


>gi|226315010|ref|YP_002774906.1| flagellar hook-basal body protein [Brevibacillus brevis NBRC
          100599]
 gi|226097960|dbj|BAH46402.1| putative flagellar hook-basal body protein [Brevibacillus brevis
          NBRC 100599]
          Length = 276

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 7/54 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + S +I+ S +      +   + N++N  T G       Y+R+  SF E++  S
Sbjct: 1  MQSLNISTSAMRGIQQALDNTANNLSNIDTIG-------YKRRVASFSELLTDS 47



 Score = 39.1 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 19/45 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  NV++  E + +    R Y  N + I  S  MM     L
Sbjct: 229 QGALESSNVSMTEEMSQLVNIQRAYQLNSRAIGISDQMMGIANQL 273


>gi|217977819|ref|YP_002361966.1| flagellar basal body rod protein [Methylocella silvestris BL2]
 gi|217503195|gb|ACK50604.1| flagellar basal body rod protein [Methylocella silvestris BL2]
          Length = 241

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  +++ SGL     R+  I+ N+AN      TPG   YR + + F+ ++  +G   V
Sbjct: 1  MQSGLYVSLSGLVALDRRLTTIAANVANQ----STPG---YRAEEVEFKSLLSKAGANPV 53

Query: 64 KKIGVDQS 71
            +   +S
Sbjct: 54 AFVSNGES 61



 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 6/27 (22%), Positives = 14/27 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMA 113
            G ++  N+N ++E A +   +R +  
Sbjct: 192 QGFIEGANINPILEMAKLIMVSRAFEN 218


>gi|256829395|ref|YP_003158123.1| hypothetical protein Dbac_1614 [Desulfomicrobium baculatum DSM
           4028]
 gi|256578571|gb|ACU89707.1| protein of unknown function DUF1078 domain protein
           [Desulfomicrobium baculatum DSM 4028]
          Length = 513

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV++  E  +M  T + + AN + I     ++ T + + R
Sbjct: 473 SNVDLATEFVNMIITQKGFDANSKVITTGDQVVQTAIQMKR 513



 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 18/79 (22%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          + +S +I  +G+  Q   M +IS+NIAN  T G       ++   + F  +M        
Sbjct: 3  ISSSLYIGTTGIMAQQKNMAVISDNIANVSTVG-------FKSSHMIFNTLMSQQMGSAS 55

Query: 59 ------GGVRVKKIGVDQS 71
                 GV V  I  D S
Sbjct: 56 VSNQVGQGVGVSSILYDMS 74


>gi|189426331|ref|YP_001953508.1| flagellar basal body rod protein [Geobacter lovleyi SZ]
 gi|189422590|gb|ACD96988.1| flagellar basal body rod protein [Geobacter lovleyi SZ]
          Length = 258

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           A G ++  NVN + E   M + +R +    + ++   DM    + DL R
Sbjct: 209 AQGALEQSNVNTIAEMVQMVDASRYFETCQRVVRSFDDMAAKAVNDLAR 257



 Score = 37.6 bits (87), Expect = 0.64,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 10/49 (20%)

Query: 13 SGLA---VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          S L+       R+ +IS N+ANA T G       +++  ++FE V+ G+
Sbjct: 7  SALSGNLAAMKRLDVISSNLANASTNG-------FKQDRLAFESVLAGN 48


>gi|149203101|ref|ZP_01880072.1| flagellar hook-associated protein K [Roseovarius sp. TM1035]
 gi|149143647|gb|EDM31683.1| flagellar hook-associated protein K [Roseovarius sp. TM1035]
          Length = 482

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L ++   A SGLA  +  + +IS N+ANA T G  P       + ++      G  GV+V
Sbjct: 3  LGSALSSALSGLAANTRAVDVISGNLANALTEGFAP-------REVTLAATRDGR-GVQV 54

Query: 64 KKIGV 68
            I  
Sbjct: 55 TGIVR 59


>gi|315649859|ref|ZP_07902942.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
 gi|315274833|gb|EFU38214.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
          Length = 281

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NV+      ++    R Y  N + ++     +   + ++ R
Sbjct: 233 QGFIEGSNVDPTQSMVELTAALRAYETNQKIVQYYDRTLEKAVNEIGR 280


>gi|261409669|ref|YP_003245910.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
 gi|261286132|gb|ACX68103.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
          Length = 293

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NV+      ++    R Y  N + ++     +   + ++ R
Sbjct: 245 QGFIEGSNVDPTQSMVELTAALRAYETNQKIVQYYDRTLEKAVNEIGR 292



 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 11/68 (16%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  Q  R   +++NIAN  TTG       Y+        V      V V
Sbjct: 1  MLRGLYTAASGMMTQEQRHNTVTQNIANVNTTG-------YKAT----NSVQRSFPEVLV 49

Query: 64 KKIGVDQS 71
            IG ++S
Sbjct: 50 SMIGGNES 57


>gi|78485811|ref|YP_391736.1| hypothetical protein Tcr_1470 [Thiomicrospira crunogena XCL-2]
 gi|78364097|gb|ABB42062.1| Flagellar basal-body rod protein FlgF [Thiomicrospira crunogena
           XCL-2]
          Length = 245

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NVN +    +M E +R Y   ++ +  S +    +  +L+
Sbjct: 197 SGALESSNVNTVEALTNMIELSRKYEMQIKMMSTSKNHAQKSDSILK 243


>gi|196249722|ref|ZP_03148418.1| flagellar basal body rod protein [Geobacillus sp. G11MC16]
 gi|196210598|gb|EDY05361.1| flagellar basal body rod protein [Geobacillus sp. G11MC16]
          Length = 295

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 12/95 (12%)

Query: 45  RRKTISFEE-----VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            R  + F       V  G+G  R  +  + Q+     +          G ++  NV++  
Sbjct: 205 ARLGVVFAANPKTVVKEGNGLFRSTEGPLPQAPGNVTYM------VKQGFIERSNVDIEQ 258

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
              D+    R + AN + I+     +   + ++ R
Sbjct: 259 TMTDLLAAYRAFEANQKIIQAYDRSLDKAVNEVGR 293



 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A SG+  Q  R   ++ N+ANA T G    +   R 
Sbjct: 20 MLRGLYTAASGMLAQQRRGDWLTNNLANAETPGYKADAGAMRA 62


>gi|300854231|ref|YP_003779215.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
           13528]
 gi|300434346|gb|ADK14113.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
           13528]
          Length = 262

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            G ++  NV++  E  DM    R +    + +  S +M
Sbjct: 216 QGSLEQSNVDLGREMTDMIMAQRSFELASKGLTTSDEM 253



 Score = 40.7 bits (95), Expect = 0.071,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 7/41 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          + S +  Q  ++  IS N+AN+ T G       Y+++ + F
Sbjct: 8  SVSAMNAQQDKLNSISNNLANSDTVG-------YKKENVEF 41


>gi|317133466|ref|YP_004092780.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
 gi|315471445|gb|ADU28049.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
          Length = 234

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G  +  NV++  E  +M  T R +  N + +  +  + +   DL
Sbjct: 189 QGAYETSNVDLSSEMGNMIVTQRGFQMNARVVSTADQIESYVNDL 233


>gi|325274798|ref|ZP_08140826.1| flagellar basal body rod protein FlgF [Pseudomonas sp. TJI-51]
 gi|324100066|gb|EGB97884.1| flagellar basal body rod protein FlgF [Pseudomonas sp. TJI-51]
          Length = 246

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH---DMMTTTLDLL 132
           SG ++  NVN + E   +   +R +  +++ +  +    + M   L + 
Sbjct: 198 SGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEAMARVLQIG 246


>gi|315121852|ref|YP_004062341.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter
          solanacearum CLso-ZC1]
 gi|313495254|gb|ADR51853.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter
          solanacearum CLso-ZC1]
          Length = 243

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 13/57 (22%)

Query: 4  LIASAHIANSGLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + +S +I   GL+ Q     R+  +++NI+N+ T+G       +R   + F EV++ 
Sbjct: 1  MQSSFNI---GLSAQIALEKRLSTVADNISNSNTSG-------FRAIKVKFSEVINS 47


>gi|302382558|ref|YP_003818381.1| fagellar hook-basal body protein [Brevundimonas subvibrioides
          ATCC 15264]
 gi|302193186|gb|ADL00758.1| fagellar hook-basal body protein [Brevundimonas subvibrioides
          ATCC 15264]
          Length = 478

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 7/47 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          SGL   SA +  IS+NIAN  T G       Y+R    F  V++   
Sbjct: 12 SGLTANSAALAAISQNIANVNTVG-------YKRTAAEFSTVVNSQS 51



 Score = 38.0 bits (88), Expect = 0.46,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E   +  T R Y A+ + I  + +M+   + + R
Sbjct: 436 EASTVDLSAEFTGLITTQRAYSASSKIITTADEMLAELISIKR 478


>gi|237752809|ref|ZP_04583289.1| flagellar basal-body rod protein flgG [Helicobacter winghamensis
          ATCC BAA-430]
 gi|229376298|gb|EEO26389.1| flagellar basal-body rod protein flgG [Helicobacter winghamensis
          ATCC BAA-430]
          Length = 277

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          G+  Q  R+ +I+ NIANA TTG       ++R  + 
Sbjct: 11 GMVTQINRLDVIANNIANANTTG-------FKRDDVV 40



 Score = 37.2 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           A   G ++  N+NV+ E   + ETNRL  A  + +K 
Sbjct: 224 AVRQGFLEKSNINVVQEMTGLIETNRLVEAYSKVLKT 260


>gi|58582749|ref|YP_201765.1| hypothetical protein XOO3126 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188577538|ref|YP_001914467.1| hypothetical protein PXO_01451 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58427343|gb|AAW76380.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188521990|gb|ACD59935.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 110

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 31/128 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+ V + R Q+ + N+A     G        +R++++     +G     V 
Sbjct: 13  MSISSIASSGMQVAALRQQVAASNVARLPVDGS-------QRQSVAASTQANGGVAANVV 65

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D S                            +  +       + AN   +++S +M
Sbjct: 66  NVSADPSA------------------------PATDLVEGVSARNDFQANANVLRRSDEM 101

Query: 125 MTTTLDLL 132
           + + LD+L
Sbjct: 102 LGSLLDVL 109


>gi|83647173|ref|YP_435608.1| flagellar hook protein FlgE [Hahella chejuensis KCTC 2396]
 gi|83635216|gb|ABC31183.1| Flagellar hook protein FlgE [Hahella chejuensis KCTC 2396]
          Length = 651

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +   +    R Y AN +TI+ ++ +  T ++L
Sbjct: 612 SNVDLSEQLVGLIIAQRNYQANAKTIETANAITQTIINL 650



 Score = 41.5 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +IA +G+   S  +++   NIANA TTG         D Y    +S      G  GVRV
Sbjct: 3  FNIALTGIRAASVDLEVTGNNIANASTTGFKRSRAEFGDLYANSFLSLGTNPVGD-GVRV 61

Query: 64 KKIGV 68
          +K+  
Sbjct: 62 QKVRQ 66


>gi|315635632|ref|ZP_07890895.1| flagellar hook-associated protein FlgK [Arcobacter butzleri JV22]
 gi|315479929|gb|EFU70599.1| flagellar hook-associated protein FlgK [Arcobacter butzleri JV22]
          Length = 636

 Score = 43.0 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 14/80 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-----GS 58
          L  + ++A +GL      ++ +S NIAN  T G       Y+++     E+         
Sbjct: 3  LFGTFNVAQTGLNASRYGIETVSNNIANKDTDG-------YKKRVTDLSEIGQMGSSITG 55

Query: 59 GGVRVKKIGVDQSTFVEEFD 78
           GV V  +    S ++  +D
Sbjct: 56 RGVNVDGVSRVTSQYL--YD 73



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+   E  ++ +    Y AN Q I    +M+   L L
Sbjct: 598 VDEDDEMVNLMKLQAAYSANAQMITAVDEMIKVILGL 634


>gi|295097202|emb|CBK86292.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 245

 Score = 43.0 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV+ +    +M  T R +  N++ I+ + +       LL
Sbjct: 201 EGSNVSPVKAMTEMIATARSFEMNMKVIRTADENAQKANQLL 242


>gi|118443708|ref|YP_877999.1| flagellar basal body rod protein FlgG [Clostridium novyi NT]
 gi|118134164|gb|ABK61208.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT]
          Length = 266

 Score = 43.0 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            ++  NVNV+ E +DM  T R + +N + ++   + +  T+ ++ R
Sbjct: 220 YLEKSNVNVMEEVSDMMMTMRNFESNQKLVQSLDETLGKTVNEVGR 265



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/33 (48%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I S + A SGL  Q A+  +IS N+ANA T G
Sbjct: 1  MIRSIYTAVSGLINQEAQQDVISNNLANATTVG 33


>gi|78067837|ref|YP_370606.1| flagellar hook protein FlgE [Burkholderia sp. 383]
 gi|77968582|gb|ABB09962.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 413

 Score = 43.0 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +  ++    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQAVDQTIINL 413



 Score = 33.7 bits (77), Expect = 7.9,   Method: Composition-based stats.
 Identities = 13/24 (54%), Positives = 15/24 (62%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          SGLA  S  + +I  NIANA T G
Sbjct: 8  SGLAGASNALDVIGNNIANANTVG 31


>gi|21672604|ref|NP_660671.1| flagellar hook protein FlgE [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008456|sp|Q8K9K6|FLGE_BUCAP RecName: Full=Flagellar hook protein flgE
 gi|21623235|gb|AAM67882.1| flagellar hook protein FlgE [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 409

 Score = 43.0 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV++  E  +M    R Y ++ Q  K    ++ T ++L
Sbjct: 366 FLESSNVDLNKELINMIIAQRNYQSSAQAFKTEDRIINTLVNL 408


>gi|261253613|ref|ZP_05946186.1| flagellar basal-body rod protein FlgF [Vibrio orientalis CIP
           102891]
 gi|260937004|gb|EEX92993.1| flagellar basal-body rod protein FlgF [Vibrio orientalis CIP
           102891]
          Length = 249

 Score = 43.0 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 84  ANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A+A      G ++  NVN + E   + +  R +   ++ +  + DM   +  LLR
Sbjct: 193 ADADVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEDMDKASDSLLR 247


>gi|325915128|ref|ZP_08177454.1| hypothetical protein XVE_1340 [Xanthomonas vesicatoria ATCC 35937]
 gi|325538650|gb|EGD10320.1| hypothetical protein XVE_1340 [Xanthomonas vesicatoria ATCC 35937]
          Length = 98

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 31/128 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+   + R Q+ + N+A            P  R+ ++     +G     V 
Sbjct: 1   MSISSIASSGMQAAALRQQVAASNVA-----RQPVDGSP--RQAVAASTQANGGVAANVV 53

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
               D S                          + +  D       + AN   +++S + 
Sbjct: 54  DAVSDPSA------------------------PVTDLVDGLSARNDFQANAAVLRRSDEA 89

Query: 125 MTTTLDLL 132
           + + LD+L
Sbjct: 90  VGSLLDVL 97


>gi|251772413|gb|EES52980.1| flagellar basal body rod protein [Leptospirillum ferrodiazotrophum]
          Length = 265

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +G V+  NV    E   M +  R Y  +LQ +   +D+   T++
Sbjct: 216 NGGVEGSNVKGTSEMVRMIQGMRTYQTDLQALHTLNDLTNRTVN 259



 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          SG   Q   M ++S N+AN  T G       +R+  + F   +
Sbjct: 10 SGAQGQEQMMDVLSSNLANVNTPG-------FRKDRVMFRSYL 45


>gi|218528944|ref|YP_002419760.1| flagellar hook-associated protein FlgK [Methylobacterium
           chloromethanicum CM4]
 gi|218521247|gb|ACK81832.1| flagellar hook-associated protein FlgK [Methylobacterium
           chloromethanicum CM4]
          Length = 632

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E +++    + Y AN + +  + DM+ T L +
Sbjct: 594 SGVNIDEEMSNLIALQQAYAANARVLTAARDMIDTLLRI 632


>gi|74317655|ref|YP_315395.1| flagellar basal-body rod protein FlgB [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057150|gb|AAZ97590.1| flagellar basal-body rod protein FlgB [Thiobacillus denitrificans
           ATCC 25259]
          Length = 133

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 15/125 (12%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIG-VDQS 71
            L V+  R Q+++ NIANA T         Y+ + + F+  + G+  G +         +
Sbjct: 15  ALRVRDQRQQVLASNIANADTPH-------YKARDLDFKTALQGALQGTQTGGTALATTA 67

Query: 72  TFVEEFDPGHPVA------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                   G   A       A G V    V+V  E A   E    Y  NL  + Q    +
Sbjct: 68  PGHLAGKAGGSDAGLLYRTPAQGSVDGNTVDVDAERAAFAENAIQYEFNLTRLNQQIKGL 127

Query: 126 TTTLD 130
              + 
Sbjct: 128 LAAIQ 132


>gi|163850384|ref|YP_001638427.1| flagellar hook-associated protein FlgK [Methylobacterium extorquens
           PA1]
 gi|163661989|gb|ABY29356.1| flagellar hook-associated protein FlgK [Methylobacterium extorquens
           PA1]
          Length = 632

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E +++    + Y AN + +  + DM+ T L +
Sbjct: 594 SGVNIDEEMSNLIALQQAYAANARVLTAARDMIDTLLRI 632


>gi|222823151|ref|YP_002574724.1| flagellar hook protein FlgE [Campylobacter lari RM2100]
 gi|222538372|gb|ACM63473.1| flagellar hook protein FlgE [Campylobacter lari RM2100]
          Length = 814

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++     ++    R Y AN +TI  S  ++ T L L
Sbjct: 771 IEMSNVDLSRALTELIVIQRGYQANSKTITTSDQLLNTLLQL 812


>gi|312115282|ref|YP_004012878.1| flagellar basal-body rod protein FlgF [Rhodomicrobium vannielii
          ATCC 17100]
 gi|311220411|gb|ADP71779.1| flagellar basal-body rod protein FlgF [Rhodomicrobium vannielii
          ATCC 17100]
          Length = 241

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +S ++A S       R+  +++N+ANA T G       YR   + F+ V+  +
Sbjct: 1  MQSSLYVALSAQVALQKRLDTVAQNVANANTVG-------YRGTEMKFDSVLSAA 48



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ASG V+  NVN + ETA +    R +     TI+     + + + 
Sbjct: 190 ASGYVEESNVNAIKETARLIYVQRAFDEAASTIQSVESGLKSAIQ 234


>gi|254559638|ref|YP_003066733.1| flagellar hook-associated protein 1 FlgK [Methylobacterium
           extorquens DM4]
 gi|254266916|emb|CAX22715.1| putative flagellar hook-associated protein 1 FlgK [Methylobacterium
           extorquens DM4]
          Length = 632

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E +++    + Y AN + +  + DM+ T L +
Sbjct: 594 SGVNIDEEMSNLIALQQAYAANARVLTAARDMIDTLLRI 632


>gi|302387773|ref|YP_003823595.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
 gi|302198401|gb|ADL05972.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
          Length = 267

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           ++  N++ + E   M  + R   +  Q +K    +M+  + D+ R
Sbjct: 222 IERSNIDPIEEMTSMMSSQRASQSAAQVLKMYDQLMSRIVSDIGR 266


>gi|240137460|ref|YP_002961931.1| putative flagellar hook-associated protein 1 FlgK [Methylobacterium
           extorquens AM1]
 gi|240007428|gb|ACS38654.1| putative flagellar hook-associated protein 1 FlgK [Methylobacterium
           extorquens AM1]
          Length = 632

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E +++    + Y AN + +  + DM+ T L +
Sbjct: 594 SGVNIDEEMSNLIALQQAYAANARVLTAARDMIDTLLRI 632


>gi|229166584|ref|ZP_04294336.1| Flagellar basal-body rod protein [Bacillus cereus AH621]
 gi|228616838|gb|EEK73911.1| Flagellar basal-body rod protein [Bacillus cereus AH621]
          Length = 161

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +  K     +S           
Sbjct: 46  NTVSSNIANANTPG-------YKAQDVTFAEQMNMSSALYKKNAADLKSNPDLYQTNVMH 98

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ +TN+LY  ++  I   + +
Sbjct: 99  LPTANTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKTNQLYGVSINAINTQYAI 154

Query: 125 MTTT 128
               
Sbjct: 155 NQAA 158


>gi|21243272|ref|NP_642854.1| hypothetical protein XAC2539 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21108808|gb|AAM37390.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 98

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 31/126 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+ V + R Q+ + N+A            P  R++++     +G    RV 
Sbjct: 1   MSISSIASSGMQVAALRQQVAASNVA-----RQPVDGSP--RQSVAAATQANGGVAARVV 53

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
               D S                            +  +       + AN   +++S  M
Sbjct: 54  NASPDPSA------------------------PATDLVEGLSARNEFQANANVLRRSDQM 89

Query: 125 MTTTLD 130
           + + LD
Sbjct: 90  LGSLLD 95


>gi|257866396|ref|ZP_05646049.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC30]
 gi|257873088|ref|ZP_05652741.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC10]
 gi|257800354|gb|EEV29382.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC30]
 gi|257807252|gb|EEV36074.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC10]
          Length = 233

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  NV V  E   M +T+R + AN + +  ++  +   + +L +
Sbjct: 184 QQGALEQANVAVADEMVAMIQTSREFEANQKALSSTNQTLQKAVNELGK 232


>gi|255523680|ref|ZP_05390646.1| flagellar basal body rod protein [Clostridium carboxidivorans P7]
 gi|255512549|gb|EET88823.1| flagellar basal body rod protein [Clostridium carboxidivorans P7]
          Length = 259

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 18/38 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +  N+NV+ E   M  T R +  N + ++   + ++  
Sbjct: 214 EKSNINVINEMVSMMTTMRTFETNQKVVQALDETLSKA 251



 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I S + A SG+  Q A+  +I+ N+ANA T G
Sbjct: 1  MIRSLYTAVSGMITQEAKQDVITNNLANATTVG 33


>gi|296274397|ref|YP_003657028.1| hypothetical protein Arnit_2873 [Arcobacter nitrofigilis DSM
          7299]
 gi|296098571|gb|ADG94521.1| protein of unknown function DUF1078 domain protein [Arcobacter
          nitrofigilis DSM 7299]
          Length = 913

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 14/80 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
          ++ S +IA SGL      ++    NIAN  T G       Y+++ +   E     G    
Sbjct: 1  MLDSLNIAQSGLKAAQTAVENTMNNIANVNTEG-------YKKRVVETSETDQLPGSKLG 53

Query: 60 -GVRVKKIGVDQSTFVEEFD 78
           GV V       S ++  +D
Sbjct: 54 RGVTVGNTIRITSEYL--YD 71



 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+   E  ++ +    Y AN + I    +M+ T L + R
Sbjct: 875 VDNDEEMINLIKFQSAYSANAKMITTVDEMLKTLLGIKR 913


>gi|26991075|ref|NP_746500.1| flagellar basal body rod protein FlgF [Pseudomonas putida KT2440]
 gi|24986109|gb|AAN69964.1|AE016634_13 flagellar basal-body rod protein FlgF [Pseudomonas putida KT2440]
          Length = 246

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 83  VANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH---DMMTTTLDLL 132
            A+ +     G ++  NVN + E   +   +R +  +++ +  +    + M   L + 
Sbjct: 189 DADVNVRVVAGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEAMARVLQIG 246


>gi|325567513|ref|ZP_08144180.1| flagellar basal-body rod protein [Enterococcus casseliflavus ATCC
           12755]
 gi|325158946|gb|EGC71092.1| flagellar basal-body rod protein [Enterococcus casseliflavus ATCC
           12755]
          Length = 233

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  NV V  E   M +T+R + AN + +  ++  +   + +L +
Sbjct: 184 QQGALEQANVAVADEMVAMIQTSREFEANQKALSSTNQTLQKAVNELGK 232


>gi|257866412|ref|ZP_05646065.1| flagellar hook-associated protein FlgK [Enterococcus
          casseliflavus EC30]
 gi|257873072|ref|ZP_05652725.1| flagellar hook-associated protein FlgK [Enterococcus
          casseliflavus EC10]
 gi|257800370|gb|EEV29398.1| flagellar hook-associated protein FlgK [Enterococcus
          casseliflavus EC30]
 gi|257807236|gb|EEV36058.1| flagellar hook-associated protein FlgK [Enterococcus
          casseliflavus EC10]
          Length = 507

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 15/82 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV----MH 56
          M  L  S   A  G+    A +Q  S NIAN  T G       Y R+ ++ +      + 
Sbjct: 1  MTGLFGSLGTATRGMTANQAALQTSSHNIANTNTDG-------YSRQRVNLQAEASYHLA 53

Query: 57 GSG----GVRVKKIGVDQSTFV 74
          G G    GV+V  +      FV
Sbjct: 54 GVGSIGMGVKVGSVERIVDDFV 75


>gi|154252985|ref|YP_001413809.1| flagellar hook-associated protein FlgK [Parvibaculum
           lavamentivorans DS-1]
 gi|154156935|gb|ABS64152.1| flagellar hook-associated protein FlgK [Parvibaculum
           lavamentivorans DS-1]
          Length = 613

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 12/92 (13%)

Query: 42  DPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
           D + R+ +SF+     +     +   V  S+  + FD                VN+  E 
Sbjct: 534 DAFARRIVSFQSGQAANATRDAEAQQVVASSLQDRFD------------AQTGVNIDDEM 581

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +++      Y AN + I     +    L + R
Sbjct: 582 SNLLLLQNAYSANARVITTIKQLFDVLLSIGR 613


>gi|46204473|ref|ZP_00049952.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum
           magnetotacticum MS-1]
          Length = 127

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  N ++  E + M  T + Y AN + +  +  M++  L+++R
Sbjct: 84  VEQSNTDIAAEFSKMIVTQQAYSANTRVMSTAQTMISDLLNVIR 127


>gi|253681456|ref|ZP_04862253.1| flagellar basal-body rod protein FlgB [Clostridium botulinum D str.
           1873]
 gi|253561168|gb|EES90620.1| flagellar basal-body rod protein FlgB [Clostridium botulinum D str.
           1873]
          Length = 134

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 10/122 (8%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ-STF 73
           L   + R  +I+ NIAN  T G       Y+R  ++FE+ +  S      KI  D+   +
Sbjct: 20  LKATAKRKNVINNNIANFNTKG-------YKRSYVTFEDSLKESKDKLDLKITNDKHIAY 72

Query: 74  VEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++F   +   + S  +K    NV+V  E  ++      Y A + T+  +  +    ++ 
Sbjct: 73  KKKFGEINVKKDESDSMKMDGNNVDVDNEMTNLAANTLEYNALITTLNSTLSLKRYIING 132

Query: 132 LR 133
            R
Sbjct: 133 GR 134


>gi|85715029|ref|ZP_01046014.1| Flagellar basal body rod protein, FlaE [Nitrobacter sp. Nb-311A]
 gi|85698226|gb|EAQ36098.1| Flagellar basal body rod protein, FlaE [Nitrobacter sp. Nb-311A]
          Length = 640

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 78  DPGHPV-ANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           D   P  A A+G +     +  N ++  E   +  T + Y AN + I  ++ M+   L++
Sbjct: 579 DESGPAIAGAAGHISGSSLEGSNTDIADEFTKLIVTQQAYSANTKVITTANSMVQDLLNV 638

Query: 132 LR 133
           LR
Sbjct: 639 LR 640



 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  + + +  GL  QS  +Q IS NIAN++TTG
Sbjct: 30 IFDALNTSVGGLQAQSFALQNISGNIANSQTTG 62


>gi|242278416|ref|YP_002990545.1| hypothetical protein Desal_0941 [Desulfovibrio salexigens DSM 2638]
 gi|242121310|gb|ACS79006.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 513

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  +  ++      Y AN + +  +  ++ T + L
Sbjct: 471 EGSNVDLASQMTELIIIQSSYQANSKVVTTADTLLQTAISL 511



 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 37/100 (37%), Gaps = 20/100 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          L +S +   SGL V S    ++S N+AN+ T G       ++     FE+V + +     
Sbjct: 3  LTSSLYTGISGLYVNSFATSVVSNNLANSSTVG-------FKSSDAIFEDVFYSTLTTGG 55

Query: 59 ------GGVRVKKIGVD--QSTFVEEFDPGHPVANASGIV 90
                 G  V  I  D  Q T+       +   N  G  
Sbjct: 56 GLAQVGNGAGVSTINTDYSQGTYQNSSISTNVAINGDGYY 95


>gi|220934391|ref|YP_002513290.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995701|gb|ACL72303.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 130

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 27/127 (21%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGV-- 61
            +  I    L ++S R+++++ N+ANA T         Y+ + I F   +  +  GGV  
Sbjct: 7   KALGIHADALQLRSRRLELLASNLANADTPN-------YKARDIDFRAALSQAQGGGVGL 59

Query: 62  --------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                    V+  GV          P  P  + +       V+  +E A   E    Y A
Sbjct: 60  MRTHASHLSVQGGGVGGEPLYRI--PNQPSLDGN------TVDAQLEQAAFSENAVQYQA 111

Query: 114 NLQTIKQ 120
           +L  +  
Sbjct: 112 SLDFLNS 118


>gi|27378811|ref|NP_770340.1| flagellar hook protein FlgE [Bradyrhizobium japonicum USDA 110]
 gi|27351960|dbj|BAC48965.1| flgE [Bradyrhizobium japonicum USDA 110]
          Length = 421

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 15/70 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          L  +   A S L+ QS  + +IS+NIAN+ TTG       Y+  +  F+ ++        
Sbjct: 3  LTGALSSAISALSAQSQSLSMISDNIANSDTTG-------YKTTSAMFDALVTASSNATS 55

Query: 56 HGSGGVRVKK 65
          + SGGV V  
Sbjct: 56 YASGGVTVSG 65


>gi|329888225|ref|ZP_08266823.1| flagellar basal-body rod protein FlgF [Brevundimonas diminuta ATCC
           11568]
 gi|328846781|gb|EGF96343.1| flagellar basal-body rod protein FlgF [Brevundimonas diminuta ATCC
           11568]
          Length = 245

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            G+++  NVN LVE  ++ E +R Y    + I+ ++D+   +++ L R
Sbjct: 196 QGMLEGSNVNTLVEITNLIEISRAYERVTKMIENANDLSRRSVERLGR 243


>gi|325567496|ref|ZP_08144163.1| hypothetical protein HMPREF9087_0452 [Enterococcus casseliflavus
          ATCC 12755]
 gi|325158929|gb|EGC71075.1| hypothetical protein HMPREF9087_0452 [Enterococcus casseliflavus
          ATCC 12755]
          Length = 507

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 15/82 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV----MH 56
          M  L  S   A  G+    A +Q  S NIAN  T G       Y R+ ++ +      + 
Sbjct: 1  MTGLFGSLGTATRGMTANQAALQTSSHNIANTNTDG-------YSRQRVNLQAEASYHLA 53

Query: 57 GSG----GVRVKKIGVDQSTFV 74
          G G    GV+V  +      FV
Sbjct: 54 GVGSIGMGVKVGSVERIVDDFV 75


>gi|254502675|ref|ZP_05114826.1| conserved domain protein [Labrenzia alexandrii DFL-11]
 gi|222438746|gb|EEE45425.1| conserved domain protein [Labrenzia alexandrii DFL-11]
          Length = 477

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 7/63 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SGL+ Q+  ++ IS N+AN++T G       ++R   +F +++ G G  + 
Sbjct: 3  IYGAINSAVSGLSAQATALENISGNVANSQTVG-------FKRLDTTFSDLVSGGGSTQA 55

Query: 64 KKI 66
           ++
Sbjct: 56 DQV 58



 Score = 37.6 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  N ++  E + +  T + Y AN + +  + +M+ + L+++R
Sbjct: 435 ELSNADIADEFSKLIITQQAYSANSRIVTSADEMLDSALNMVR 477


>gi|313497763|gb|ADR59129.1| Flagellar basal body rod protein FlgF [Pseudomonas putida BIRD-1]
          Length = 246

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 83  VANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH---DMMTTTLDLL 132
            A+ +     G ++  NVN + E   +   +R +  +++ +  +    + M   L + 
Sbjct: 189 DADVNVRVVAGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEAMARVLQIG 246


>gi|311992301|gb|ADQ26724.1| flagellar hook protein [Aeromonas hydrophila]
          Length = 443

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  +  ++    R + AN ++++ +  +  T L +
Sbjct: 402 EQSNVDLTSQLVNLITAQRNFQANSRSLEVNSSLQQTILQI 442



 Score = 40.3 bits (94), Expect = 0.100,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S + A SG+      + + + NIAN  TTG
Sbjct: 1  SFNNALSGVNAAQKDLNVTANNIANVNTTG 30


>gi|257871323|ref|ZP_05650976.1| flagellar hook-associated protein FlgK [Enterococcus gallinarum
          EG2]
 gi|257805487|gb|EEV34309.1| flagellar hook-associated protein FlgK [Enterococcus gallinarum
          EG2]
          Length = 507

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 15/82 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV----MH 56
          M  L  S   A  G+    A +Q  S NIAN  T G       Y R+ ++ +      + 
Sbjct: 1  MTGLFGSLGTATRGMTANQAALQTSSHNIANTNTDG-------YSRQRVNLQAEASYHLA 53

Query: 57 GSG----GVRVKKIGVDQSTFV 74
          G G    GV+V  +      FV
Sbjct: 54 GVGSIGMGVKVGSVERIVDDFV 75


>gi|167469720|ref|ZP_02334424.1| flagellar hook protein FlgE [Yersinia pestis FV-1]
          Length = 73

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 10/62 (16%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIG 67
          A SG+   S+ + +I  NIAN+ T+G       ++  ++SF ++  GS    GV+V  I 
Sbjct: 6  AVSGMNAASSNLDVIGNNIANSATSG-------FKAGSVSFADMFAGSQTGMGVKVAGIT 58

Query: 68 VD 69
           D
Sbjct: 59 QD 60


>gi|117620743|ref|YP_857343.1| flagellar hook protein FlgE [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117562150|gb|ABK39098.1| flagellar hook protein FlgE [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 444

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  +  ++    R + AN ++++ +  +  T L +
Sbjct: 403 EQSNVDLTSQLVNLITAQRNFQANSRSLEVNSSLQQTILQI 443



 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S + A SG+      + + + NIAN  TTG
Sbjct: 2  SFNNALSGVNAAQKDLNVTANNIANVNTTG 31


>gi|152985192|ref|YP_001349650.1| flagellar hook protein FlgE [Pseudomonas aeruginosa PA7]
 gi|150960350|gb|ABR82375.1| flagellar hook protein [Pseudomonas aeruginosa PA7]
          Length = 462

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  SG ++  NV++  E  ++    R Y AN +TI+    +  T ++L
Sbjct: 414 ALQSGALEASNVDISSELVNLIVHQRNYQANAKTIQTEDAVTQTIINL 461



 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVR 62
          S +I  SG+   S+ + +   NIANA T G        +D Y   ++          GV 
Sbjct: 2  SFNIGLSGIQAASSGLNVTGNNIANAGTVGFKQSRAEFADVYAA-SVLGSGSNPQGSGVL 60

Query: 63 VKKI 66
          +  I
Sbjct: 61 LSDI 64


>gi|296283217|ref|ZP_06861215.1| flagellar hook protein FlgE [Citromicrobium bathyomarinum JL354]
          Length = 412

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++G ++  NV++  E  +M    R Y A+ + I    DM+     L R
Sbjct: 365 SAGTLEASNVDLAQEFTNMIRFQRAYSASSKIITTVDDMLQEVSALKR 412


>gi|257876025|ref|ZP_05655678.1| flagellar hook-associated protein FlgK [Enterococcus
          casseliflavus EC20]
 gi|257810191|gb|EEV39011.1| flagellar hook-associated protein FlgK [Enterococcus
          casseliflavus EC20]
          Length = 507

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 15/82 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV----MH 56
          M  L  S   A  G+    A +Q  S NIAN  T G       Y R+ ++ +      + 
Sbjct: 1  MTGLFGSLGTATRGMTANQAALQTSSHNIANTNTDG-------YSRQRVNLQAEASYHLA 53

Query: 57 GSG----GVRVKKIGVDQSTFV 74
          G G    GV+V  +      FV
Sbjct: 54 GVGSIGMGVKVGSVERIVDDFV 75


>gi|229058377|ref|ZP_04196761.1| Flagellar basal-body rod protein [Bacillus cereus AH603]
 gi|228719886|gb|EEL71476.1| Flagellar basal-body rod protein [Bacillus cereus AH603]
          Length = 161

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +  K     +S           
Sbjct: 46  NTVSSNIANANTPG-------YKAQDVTFAEKMNMSSALYKKNAADLKSNPDLYQTNVMH 98

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ +TN+LY  ++  I   + +
Sbjct: 99  LPTANTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKTNQLYGVSINAINTQYAI 154

Query: 125 MTTT 128
               
Sbjct: 155 NQAA 158


>gi|188580158|ref|YP_001923603.1| flagellar hook-associated protein FlgK [Methylobacterium populi
           BJ001]
 gi|179343656|gb|ACB79068.1| flagellar hook-associated protein FlgK [Methylobacterium populi
           BJ001]
          Length = 632

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E +++    + Y AN + +  + DM+ T L +
Sbjct: 594 SGVNIDQEMSNLIALQQAYAANARVLTAARDMIDTLLRI 632



 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 7/64 (10%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +   A +GL V  A++ ++S+NIAN  T G       Y R+T+S      G+ GV   
Sbjct: 3  LDAFSTATAGLRVTQAQIGVVSQNIANVGTAG-------YVRRTLSPVAAGVGNAGVATG 55

Query: 65 KIGV 68
           IG 
Sbjct: 56 TIGR 59


>gi|228907376|ref|ZP_04071234.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 200]
 gi|228852237|gb|EEM97033.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 200]
          Length = 135

 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M  S  +        +S           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMKKSSALYKNNAADLKSNPDLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ +TN+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKTNQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|254488501|ref|ZP_05101706.1| flagellar hook protein FlgE [Roseobacter sp. GAI101]
 gi|214045370|gb|EEB86008.1| flagellar hook protein FlgE [Roseobacter sp. GAI101]
          Length = 432

 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E   M  T R Y +N + I+   +M+  T ++ R
Sbjct: 395 DVATELTTMIRTQRAYSSNAKVIQTVDEMLQETTNIKR 432



 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 14/69 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          + +S +   +GL   + R+  +S+NIAN+ T G       Y+R    F  ++       +
Sbjct: 3  ISSSLNAGVAGLQANATRLASVSDNIANSSTYG-------YKRVVTDFNSLVLSEGSSSY 55

Query: 57 GSGGVRVKK 65
           +GGVR   
Sbjct: 56 TAGGVRASS 64


>gi|254470088|ref|ZP_05083492.1| flagellar hook protein [Pseudovibrio sp. JE062]
 gi|211960399|gb|EEA95595.1| flagellar hook protein [Pseudovibrio sp. JE062]
          Length = 561

 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A +GL  QS  ++ IS N+AN+ TTG       Y+R   SF +++  +G  + 
Sbjct: 3  IYGAINSATTGLDAQSKALENISGNVANSSTTG-------YKRLDTSFSDLVSSTGSRQA 55

Query: 64 KKI 66
          +++
Sbjct: 56 EQV 58



 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 23/41 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N ++  E + +  T + Y AN + +  ++ M+ + L+++R
Sbjct: 521 SNADIAKEFSKLIITQQAYSANSKVLSTANQMLDSVLNIVR 561


>gi|157694039|ref|YP_001488501.1| flagellar hook-basal body protein [Bacillus pumilus SAFR-032]
 gi|194016453|ref|ZP_03055067.1| flagellar hook-basal body complex protein FlhP [Bacillus pumilus
           ATCC 7061]
 gi|157682797|gb|ABV63941.1| flagellar hook-basal body protein [Bacillus pumilus SAFR-032]
 gi|194011926|gb|EDW21494.1| flagellar hook-basal body complex protein FlhP [Bacillus pumilus
           ATCC 7061]
          Length = 272

 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  E  D+  T R Y  N +TI     M+
Sbjct: 226 QQGALETSNVDMSKELTDLMTTQRSYQMNSRTITMGDQML 265



 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 7/37 (18%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + IIS NIAN+ TTG       YR K   F E++   
Sbjct: 19 LDIISNNIANSETTG-------YRAKNTRFSELIRQQ 48


>gi|167034942|ref|YP_001670173.1| flagellar basal body rod protein FlgF [Pseudomonas putida GB-1]
 gi|166861430|gb|ABY99837.1| flagellar basal-body rod protein FlgF [Pseudomonas putida GB-1]
          Length = 246

 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 83  VANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH---DMMTTTLDLL 132
            A+ +     G ++  NVN + E   +   +R +  +++ +  +    + M   L + 
Sbjct: 189 DADVNVRVVAGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEAMARVLQIG 246


>gi|256371026|ref|YP_003108850.1| flagellar hook-associated protein FlgK [Acidimicrobium
          ferrooxidans DSM 10331]
 gi|256007610|gb|ACU53177.1| flagellar hook-associated protein FlgK [Acidimicrobium
          ferrooxidans DSM 10331]
          Length = 462

 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          + +IA SGL  Q   + ++++N+ANA T G    S     + +    V     GV V+ +
Sbjct: 5  ALYIALSGLEAQQVGLDVVAQNVANANTPGYQSESVDLANQQLPGSPVGD---GVTVQGV 61

Query: 67 GVDQSTFVE 75
             Q+TF  
Sbjct: 62 LQAQNTFAR 70


>gi|168180937|ref|ZP_02615601.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916]
 gi|182668349|gb|EDT80328.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916]
          Length = 255

 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 6/56 (10%)

Query: 80  GHPVANASGIVK-----YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +P  N +GIV+       NVNV  E   M  T R +  N + ++   + +  T++
Sbjct: 195 NNPQ-NINGIVRQNSLEKSNVNVTNEMVTMLTTMRSFETNQKIVQSIDETLGKTVN 249


>gi|325291942|ref|YP_004277806.1| flagellar basal body rod protein FlgB [Agrobacterium sp. H13-3]
 gi|325059795|gb|ADY63486.1| flagellar basal body rod protein FlgB [Agrobacterium sp. H13-3]
          Length = 130

 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 18/119 (15%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHG-SGGVRVKKI------GVDQ 70
           S R ++++ NIANA T         +  K +S FE VM   S  V + K         + 
Sbjct: 18  SVRQEVVATNIANANTPK-------FHAKDVSPFEAVMQATSQQVGMAKTHPAHFGASEL 70

Query: 71  STFVEEFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           S  +   D  +P+ N  G+ +  N V +  E     E  R Y  N   +K  H MM  T
Sbjct: 71  SENIAVRD--NPINNEIGMQESGNSVALAEEMTKTGEIKRQYDLNASLVKSFHRMMLMT 127


>gi|317152826|ref|YP_004120874.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
          Aspo-2]
 gi|316943077|gb|ADU62128.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
          Aspo-2]
          Length = 515

 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 24/81 (29%)

Query: 8  AHIANS------GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
            I  S      GL  QS    ++S N+AN+ TT        Y+  +I+FE+V + +   
Sbjct: 1  MSITGSMYTGISGLKAQSQATSVVSNNLANSTTTA-------YKSSSITFEDVFYSTVYA 53

Query: 59 --------GGVRVKKIGVDQS 71
                   GV V  +  D S
Sbjct: 54 GGSVGQVGNGVTVASVNTDYS 74



 Score = 41.1 bits (96), Expect = 0.059,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV+   E   +      Y AN + I  +  +++  + + R
Sbjct: 473 EQSNVDTATELTKLIILQAAYQANAKVITTADTLLSAAISMKR 515


>gi|257876009|ref|ZP_05655662.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC20]
 gi|257810175|gb|EEV38995.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC20]
          Length = 233

 Score = 43.0 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  NV V  E   M +T+R + AN + +  ++  +   + +L +
Sbjct: 184 QQGALEQANVAVADEMVAMIQTSREFEANQKALSSTNQTLQKAVNELGK 232


>gi|254420343|ref|ZP_05034067.1| hypothetical protein BBAL3_2653 [Brevundimonas sp. BAL3]
 gi|196186520|gb|EDX81496.1| hypothetical protein BBAL3_2653 [Brevundimonas sp. BAL3]
          Length = 135

 Score = 43.0 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 15/115 (13%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGG---VRVKKIGVDQSTFVEE 76
           R ++I+EN+ANA T    PG      K  + F   +   GG   VR  +  +        
Sbjct: 22  RQRVIAENVANADT----PGYGGRDLKQPTDFAAALRSGGGLQVVRTNRAHIAPPVSAPR 77

Query: 77  FDPG-HPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           FDP   P +     G     +V V  +   M E+   Y A +   ++S  M+   
Sbjct: 78  FDPTKSPDSETTLDGN----SVVVEEQMLKMAESRMAYDAAIGFYQKSMSMLRMA 128


>gi|323341352|ref|ZP_08081596.1| hypothetical protein HMPREF0542_12027 [Lactobacillus ruminis ATCC
          25644]
 gi|323091229|gb|EFZ33857.1| hypothetical protein HMPREF0542_12027 [Lactobacillus ruminis ATCC
          25644]
          Length = 514

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 15/83 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE----VMH 56
          M  L  +   A SG+      +Q  + NIAN  T G       Y R+ +        V+ 
Sbjct: 1  MSGLFGTLGTATSGITANQVALQTTAHNIANTNTDG-------YSRQRVHMTTKPPYVIA 53

Query: 57 GSG----GVRVKKIGVDQSTFVE 75
          G+G    GV V  +      FV 
Sbjct: 54 GTGTIGTGVNVTGVERVVDDFVR 76



 Score = 34.5 bits (79), Expect = 5.4,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 17/34 (50%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
              VN+  E +D+ +  + + AN + +    +M+
Sbjct: 472 MSGVNINEEMSDVIKFQQGFQANTRVLSVIAEML 505


>gi|126653432|ref|ZP_01725528.1| flagellar basal-body rod protein [Bacillus sp. B14905]
 gi|126589788|gb|EAZ83921.1| flagellar basal-body rod protein [Bacillus sp. B14905]
          Length = 210

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
            ++  NV+      D+    R + AN + ++     M     ++ +
Sbjct: 164 FLEGSNVDSGRAMTDLMTAYRAFEANQKVLQAYDRSMEKAVNEIGK 209


>gi|148266117|ref|YP_001232823.1| flagellar basal body rod protein [Geobacter uraniireducens Rf4]
 gi|146399617|gb|ABQ28250.1| flagellar basal body rod protein [Geobacter uraniireducens Rf4]
          Length = 244

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 22/95 (23%)

Query: 56  HGSGGVRVKKIGVDQST---FVEEFD----------PGHPV-AN--------ASGIVKYP 93
           +G GGV V  + V       F + +           P  P  A           G ++  
Sbjct: 143 NGKGGVLVDGVSVGTLEVVDFPKPYALEKIGNGLFIPADPQVAPQAVTTASVKQGFLEDS 202

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           NVNV+ E A M ET+R + +  + I+   D+    
Sbjct: 203 NVNVVTEMARMIETSRYFDSCQKVIRSYDDVAAKA 237



 Score = 38.8 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A SG      R+++IS N+ANA T G       ++   + FE V+  +
Sbjct: 8  ALSGSLAAMQRLEVISNNLANANTPG-------FKGDRLQFESVLANT 48


>gi|254785373|ref|YP_003072802.1| flagellar basal body rod protein FlgF [Teredinibacter turnerae
           T7901]
 gi|237683950|gb|ACR11214.1| flagellar basal-body rod protein FlgF [Teredinibacter turnerae
           T7901]
          Length = 250

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG V+  NVN + E   +    R Y   ++ ++   +    +  LL+
Sbjct: 201 SGFVEGSNVNAVNELTSVMSLARQYEMQVKIMQTVKEDSEASARLLQ 247



 Score = 33.7 bits (77), Expect = 9.0,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 11/40 (27%)

Query: 1  MDYLIASAHIANSG----LAVQSARMQIISENIANARTTG 36
          MD    + +IA SG    +  Q+    + + N+AN  TTG
Sbjct: 1  MD---KALYIAMSGAKHNMRAQT----VHANNLANVNTTG 33


>gi|163758012|ref|ZP_02165100.1| flagellar basal-body rod protein B [Hoeflea phototrophica DFL-43]
 gi|162284301|gb|EDQ34584.1| flagellar basal-body rod protein B [Hoeflea phototrophica DFL-43]
          Length = 125

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 21/120 (17%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK-----IGVDQSTF 73
           + R  +++ NIAN  T G T       R+  +FE VM  + G R+       I  D    
Sbjct: 18  TVRQSVVAGNIANVNTPGYT------AREVAAFEAVMQET-GTRMAATHPGHIQEDPMRG 70

Query: 74  VEEFDPGHPVANASGIVKYP---NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               +        +G+   P   +VN+  E +   E  R+Y  N   +K  H MM  T+ 
Sbjct: 71  AVRSE------RQNGVEVMPSGNSVNLPDELSKTGEIKRMYELNAGMVKAFHRMMLLTVR 124


>gi|70731823|ref|YP_261565.1| flagellar hook protein FlgE [Pseudomonas fluorescens Pf-5]
 gi|68346122|gb|AAY93728.1| flagellar hook protein FlgE [Pseudomonas fluorescens Pf-5]
          Length = 447

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVN+  E  ++ +    Y AN +TI     +M T + +
Sbjct: 408 SNVNLTNELVNLIKAQSNYQANAKTISTQSTIMQTIIQM 446



 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   + ++ +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVATTG 31


>gi|254440385|ref|ZP_05053879.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198255831|gb|EDY80145.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 432

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E  ++ +T R Y +N + I+   +M+  T ++ R
Sbjct: 395 DVAAELTNLIKTQRAYSSNAKVIQTVDEMLQETTNIKR 432



 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 16/80 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
          + +S + + +GLA  ++R+  IS+NIAN+ T G       Y+R    F  ++   G    
Sbjct: 3  ISSSFNASVAGLASNASRLATISDNIANSSTYG-------YKRVVADFHSMVVDGGKGKY 55

Query: 60 -----GVRVKKIGVDQSTFV 74
               GV  +++  ++   V
Sbjct: 56 TAGGVGVTTQRLIDERGPLV 75


>gi|77165838|ref|YP_344363.1| hypothetical protein Noc_2375 [Nitrosococcus oceani ATCC 19707]
 gi|254433154|ref|ZP_05046662.1| conserved domain protein [Nitrosococcus oceani AFC27]
 gi|76884152|gb|ABA58833.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207089487|gb|EDZ66758.1| conserved domain protein [Nitrosococcus oceani AFC27]
          Length = 425

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +G ++  NV++  E   +    R + AN + I+ +  +  T +++
Sbjct: 379 QTGALESSNVDLTAELVHLITAQRNFQANAKAIETASTVTDTIINI 424



 Score = 41.5 bits (97), Expect = 0.040,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          + + + SGL   S+ + I + NIANA TTG
Sbjct: 2  AFNTSLSGLNAASSDLDITANNIANASTTG 31


>gi|330880524|gb|EGH14673.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 52

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 13  SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 51


>gi|296447447|ref|ZP_06889372.1| flagellar basal-body rod protein FlgF [Methylosinus trichosporium
           OB3b]
 gi|296255067|gb|EFH02169.1| flagellar basal-body rod protein FlgF [Methylosinus trichosporium
           OB3b]
          Length = 240

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
             G+V+  NVN + E   +   +R +  ++ ++ 
Sbjct: 191 EQGVVETANVNPVREMVKLISASRAFE-SVSSMN 223


>gi|260774939|ref|ZP_05883840.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609194|gb|EEX35352.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 249

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NVN + E  ++ +  R +   ++ +  + +M   +  LLR
Sbjct: 201 TGALEGSNVNAIGEMTNLIDLQRQFEMQVKMMSTAEEMDKASDSLLR 247


>gi|330809244|ref|YP_004353706.1| flagellar hook protein FlgE [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377352|gb|AEA68702.1| putative flagellar hook protein FlgE [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 392

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++  NV++  E  D+    R Y A+ + +  S++M+   
Sbjct: 345 GYLELSNVDLAQEFGDILIIQRGYQASSRVMTVSNEMLEQL 385


>gi|260768781|ref|ZP_05877715.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
 gi|260616811|gb|EEX41996.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
          Length = 229

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             FDP   VA  SG ++  NV+ L E   M    R Y   ++ +  + ++      LLR
Sbjct: 172 LAFDPE--VAVRSGYLEGSNVSSLDELVSMMALTRQYEMQVKAMASASEIEKMGNQLLR 228


>gi|168705106|ref|ZP_02737383.1| flagellar basal-body rod protein FlgG [Gemmata obscuriglobus UQM
          2246]
          Length = 261

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 8/74 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPG-----SDPYRRKTISFE--EVMH 56
          L ++   + SG+   S  + + S NIAN+ T G   G        YR           + 
Sbjct: 2  LASAITSSASGIRAASTYLDVTSNNIANSDTPGYKTGQITFQDQLYRAADPVGAPTTGVT 61

Query: 57 GSGGVRV-KKIGVD 69
             G ++   + VD
Sbjct: 62 PPSGTQIGSGVVVD 75



 Score = 37.2 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV +  E  ++    + +  N Q ++    ++  T DL+R
Sbjct: 214 ESGRLEQSNVELANELVNLIVAQQAFRFNTQALQLESQVLQVTTDLIR 261


>gi|170722892|ref|YP_001750580.1| flagellar hook protein FlgE [Pseudomonas putida W619]
 gi|169760895|gb|ACA74211.1| flagellar basal body FlaE domain protein [Pseudomonas putida
          W619]
          Length = 451

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 18/71 (25%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------- 58
          S +I  SGL   + ++ +   NIAN  TTG       ++     F +V  G+        
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVNTTG-------FKSSRAEFADVYAGANRLGVGKN 54

Query: 59 ---GGVRVKKI 66
              GVR+  I
Sbjct: 55 QVGNGVRLAAI 65



 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NVN+  E  ++ +    Y AN +TI     +M T + +
Sbjct: 410 EASNVNLTQELVELIKAQSNYQANAKTISTESTIMQTIIQM 450


>gi|15596277|ref|NP_249771.1| flagellar hook protein FlgE [Pseudomonas aeruginosa PAO1]
 gi|107100525|ref|ZP_01364443.1| hypothetical protein PaerPA_01001550 [Pseudomonas aeruginosa PACS2]
 gi|218892956|ref|YP_002441825.1| flagellar hook protein FlgE [Pseudomonas aeruginosa LESB58]
 gi|254234216|ref|ZP_04927539.1| flagellar hook protein FlgE [Pseudomonas aeruginosa C3719]
 gi|254239438|ref|ZP_04932760.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 2192]
 gi|9946996|gb|AAG04469.1|AE004539_11 flagellar hook protein FlgE [Pseudomonas aeruginosa PAO1]
 gi|126166147|gb|EAZ51658.1| flagellar hook protein FlgE [Pseudomonas aeruginosa C3719]
 gi|126192816|gb|EAZ56879.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 2192]
 gi|218773184|emb|CAW28996.1| flagellar hook protein FlgE [Pseudomonas aeruginosa LESB58]
          Length = 462

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  SG ++  NV++  E  ++    R Y AN +TI+    +  T ++L
Sbjct: 414 ALQSGALEASNVDISNELVNLIVHQRNYQANAKTIQTEDAVTQTIINL 461



 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG 59
          S +I  SG+   S+ + +   NIANA T G        +D Y    +       GSG
Sbjct: 2  SFNIGLSGIQAASSGLNVTGNNIANAGTVGFKQSRAEFADVYAASVLGSGSNPQGSG 58


>gi|299538000|ref|ZP_07051286.1| flagellar basal-body rod protein [Lysinibacillus fusiformis ZC1]
 gi|298726582|gb|EFI67171.1| flagellar basal-body rod protein [Lysinibacillus fusiformis ZC1]
          Length = 277

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
            ++  NV+      D+    R + AN + ++     M     ++ +
Sbjct: 231 FLEGSNVDSGRTMTDLMTAYRAFEANQKVLQAYDRSMEKAVNEIGK 276


>gi|161349955|ref|YP_733400.2| flagellar basal body rod protein FlgF [Shewanella sp. MR-4]
 gi|161367434|ref|YP_737389.2| flagellar basal body rod protein FlgF [Shewanella sp. MR-7]
          Length = 247

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|163750570|ref|ZP_02157808.1| flagellar hook protein [Shewanella benthica KT99]
 gi|161329725|gb|EDQ00714.1| flagellar hook protein [Shewanella benthica KT99]
          Length = 455

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHG-SGGV 61
          S +IA SG+A     +   + NIAN  + G        +D Y      F        GGV
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFADVYA--NSIFANGKTAVGGGV 59

Query: 62 RVKKIGV 68
             +I  
Sbjct: 60 TTSQIAQ 66



 Score = 41.5 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  +  ++    R + A+ +T++ ++ +  T L +
Sbjct: 414 EQSNVDLTTQLVNLISAQRNFQASSRTLEVNNTLQQTILQI 454


>gi|161367438|ref|YP_868965.2| flagellar basal body rod protein FlgF [Shewanella sp. ANA-3]
          Length = 247

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|113884291|gb|ABI38343.1| flagellar basal-body rod protein FlgF [Shewanella sp. MR-4]
 gi|113888281|gb|ABI42332.1| flagellar basal-body rod protein FlgF [Shewanella sp. MR-7]
          Length = 252

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 203 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 250


>gi|116626491|ref|YP_828647.1| flagellar basal body rod protein [Candidatus Solibacter usitatus
          Ellin6076]
 gi|116229653|gb|ABJ88362.1| flagellar basal body rod protein [Candidatus Solibacter usitatus
          Ellin6076]
          Length = 241

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          MD L A   IA SGL  +   + +++ N+ANA T G     + Y
Sbjct: 1  MDPLTA---IAASGLRARMESLDLLANNVANASTGGYKADREFY 41


>gi|117612105|gb|ABK47559.1| flagellar basal-body rod protein FlgF [Shewanella sp. ANA-3]
          Length = 252

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 203 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 250


>gi|196247642|ref|ZP_03146344.1| flagellar basal-body rod protein FlgB [Geobacillus sp. G11MC16]
 gi|196212426|gb|EDY07183.1| flagellar basal-body rod protein FlgB [Geobacillus sp. G11MC16]
          Length = 129

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 14/124 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M    ++ H    GL   S R Q I++NIAN  T G       Y+ K + F+  ++ +  
Sbjct: 1   MSLFSSTIHWIEQGLRYASLRQQAIADNIANVDTPG-------YKAKDVRFQAELNRALQ 53

Query: 61  VRVKKIGVDQSTFVEEFDPGH---PVANAS-GIVKYPN-VNVLVETADMRETNRLYMANL 115
           +  K+   +   F    +        ANA+       N V++  E + + E    Y A +
Sbjct: 54  LEAKRTNPNHFPFRS--EQNGKIIVTANANISYNHNSNSVDIDQEMSKLAENQIYYNALI 111

Query: 116 QTIK 119
           + + 
Sbjct: 112 EQLN 115


>gi|116049009|ref|YP_792189.1| flagellar hook protein FlgE [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296390556|ref|ZP_06880031.1| flagellar hook protein FlgE [Pseudomonas aeruginosa PAb1]
 gi|313106035|ref|ZP_07792294.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 39016]
 gi|115584230|gb|ABJ10245.1| flagellar hook protein FlgE [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310878796|gb|EFQ37390.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 39016]
          Length = 462

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  SG ++  NV++  E  ++    R Y AN +TI+    +  T ++L
Sbjct: 414 ALQSGALEASNVDISNELVNLIVHQRNYQANAKTIQTEDAVTQTIINL 461



 Score = 38.0 bits (88), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG 59
          S +I  SG+   S+ + +   NIANA T G        +D Y    +       GSG
Sbjct: 2  SFNIGLSGIQAASSGLNVTGNNIANAGTVGFKQSRAEFADVYAASVLGSGSNPQGSG 58


>gi|255323598|ref|ZP_05364728.1| flagellar hook protein FlgE [Campylobacter showae RM3277]
 gi|255299312|gb|EET78599.1| flagellar hook protein FlgE [Campylobacter showae RM3277]
          Length = 756

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R + AN +TI  S +M+ T L L
Sbjct: 715 EMSNVDLSRSLTQLIVVQRGFQANSKTITTSDEMLNTLLQL 755


>gi|302383955|ref|YP_003819778.1| flagellar basal-body rod protein FlgF [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194583|gb|ADL02155.1| flagellar basal-body rod protein FlgF [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 245

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            G+++  NVN LVE  ++ E  R Y    + I+   D+   +++ L R
Sbjct: 196 QGMLEGSNVNTLVEITNLIEITRAYERATKMIENVQDLSRRSVERLGR 243


>gi|291613044|ref|YP_003523201.1| flagellar hook-associated protein FlgK [Sideroxydans
          lithotrophicus ES-1]
 gi|291583156|gb|ADE10814.1| flagellar hook-associated protein FlgK [Sideroxydans
          lithotrophicus ES-1]
          Length = 640

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 7/75 (9%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   IA S L    A +   S NIANA T G       Y R+ I    ++  + G    
Sbjct: 1  MSIYGIAVSALNAAQAGLTTTSNNIANANTPG-------YSRQAIIQAGMLPQNTGSGYF 53

Query: 65 KIGVDQSTFVEEFDP 79
            GV+ +T V  +D 
Sbjct: 54 GQGVNVTTVVRRYDQ 68


>gi|229096229|ref|ZP_04227202.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-29]
 gi|228687189|gb|EEL41094.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-29]
          Length = 138

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 43/125 (34%), Gaps = 31/125 (24%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG-- 80
             +S NIANA T G       Y+ + ++F E M  S  +        +S     +     
Sbjct: 23  NTVSSNIANANTPG-------YKAQDVTFAEQMSKSSALYKNNAADLKSNPDL-YQTNEM 74

Query: 81  --------HPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                   +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + 
Sbjct: 75  HLPTVNMKNTYAKIQTKSMQKNQDGN----SVDVTTEMLDLMKANQLYGISINAINTQYA 130

Query: 124 MMTTT 128
           +    
Sbjct: 131 INQAA 135


>gi|146281771|ref|YP_001171924.1| flagellar hook protein FlgE [Pseudomonas stutzeri A1501]
 gi|145569976|gb|ABP79082.1| flagellar hook protein FlgE [Pseudomonas stutzeri A1501]
          Length = 438

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  +  ++    R Y AN +T++    +  T ++L
Sbjct: 392 QSGALEDSNVDLTAQLVNLIVAQRNYQANAKTVETESAIAQTIINL 437



 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 12/79 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHGSGGVR 62
          + ++A SGL   S  + +   NIAN  TTG       ++     F       M GSGG  
Sbjct: 2  TFNVALSGLNAASTDLNVTGNNIANVGTTG-------FKASRAEFADLYATSMLGSGGNA 54

Query: 63 VKKIGVDQSTFVEEFDPGH 81
          V   GV  +   ++F  G+
Sbjct: 55 VGS-GVTTADIAQQFTQGN 72


>gi|157164118|ref|YP_001467097.1| flagellar basal-body rod protein [Campylobacter concisus 13826]
 gi|112799948|gb|EAT97292.1| flagellar basal-body rod protein [Campylobacter concisus 13826]
          Length = 269

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A +G+  Q  R+ +IS N+AN  T G       Y+R  + 
Sbjct: 8  ATAGMVTQFNRLNVISNNLANVNTIG-------YKRNDVV 40



 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 5/34 (14%)

Query: 84  ANA--SGIVKYPNVNVLVETADMRETNR---LYM 112
           A++   G  +  NVN ++E   + ET R   +Y 
Sbjct: 214 ADSVMQGYAQMSNVNPVLEMVGLIETQRLVDMYQ 247


>gi|94263287|ref|ZP_01287103.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|94267694|ref|ZP_01290963.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93451896|gb|EAT02627.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456370|gb|EAT06494.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 260

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV V  E  ++  T R +  N ++++ +  ++     L R
Sbjct: 220 SNVEVTEELVNLIITQRAFEMNSKSVQTADQLLEVANTLKR 260



 Score = 41.5 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 8/62 (12%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQ 70
           +G+  Q  ++  IS N+AN  T G       +++    FE++ +     V V+ I   Q
Sbjct: 9  TTGMRGQQLQLDTISNNLANVNTAG-------FKKSRTQFEDLYYQELRAVGVENIDGGQ 61

Query: 71 ST 72
            
Sbjct: 62 VP 63


>gi|90021858|ref|YP_527685.1| GTP-binding protein LepA [Saccharophagus degradans 2-40]
 gi|89951458|gb|ABD81473.1| flagellar basal-body rod protein FlgB [Saccharophagus degradans
          2-40]
          Length = 134

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +  I  S L+++S R  +++ N+AN  T G       Y+ + I F++ +  S G
Sbjct: 7  KALGIYESALSLRSERAGVLANNLANVNTPG-------YKARDIDFQQALKDSMG 54


>gi|323700469|ref|ZP_08112381.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
 gi|323460401|gb|EGB16266.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
          ND132]
          Length = 516

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 26/91 (28%)

Query: 8  AHIANS------GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
            I+ S      GL  QS    ++S N+AN+ TTG       Y+  +I+FE+V + +   
Sbjct: 1  MSISGSMYTGISGLQAQSQATSVVSNNLANSTTTG-------YKSVSIAFEDVFYSTVYA 53

Query: 59 --------GGVRVKKIGVDQSTFVEEFDPGH 81
                   GV    +  D S     ++  +
Sbjct: 54 GGSLGQVGNGVTTSSLTTDYS--QGAYETTN 82



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV+   +  ++      Y AN + I  +  +++T + L R
Sbjct: 474 EQSNVDTATQLTNLIIIQAAYQANSKIITTADTLLSTAIGLKR 516


>gi|301168116|emb|CBW27702.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
          Length = 135

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 50/130 (38%), Gaps = 20/130 (15%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD    +     S L  +  R +IIS NIANA T G       Y+ K + FE+ +  +  
Sbjct: 1   MDVNDKTLKALASSLNFRQMRQEIISSNIANAETPG-------YKAKRVDFEQALARA-- 51

Query: 61  VRVKKIGVDQSTFVEEFDPGH---------PVANASGIVKYPN--VNVLVETADMRETNR 109
           + V       +     FD G             + +GIV      V+   E A M E   
Sbjct: 52  LDVDGQQQLNTEDSRHFDVGSGGFGNLQPEVYEDPNGIVSEDGNTVDRDAELARMAENKI 111

Query: 110 LYMANLQTIK 119
           LY A +Q I 
Sbjct: 112 LYDATVQLIN 121


>gi|149375033|ref|ZP_01892806.1| Flagellar basal body rod protein [Marinobacter algicola DG893]
 gi|149360922|gb|EDM49373.1| Flagellar basal body rod protein [Marinobacter algicola DG893]
          Length = 250

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 79  PGHPVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           P  P A    ASG ++  NVN + E     + +R Y   ++ +  +++    +  LL++
Sbjct: 191 PEPPDATMRVASGFLESSNVNAVEEMISNLQLSRQYEMQVKIMTTANENAEASARLLQN 249


>gi|42780836|ref|NP_978083.1| flagellar basal body rod protein FlgB [Bacillus cereus ATCC 10987]
 gi|42736756|gb|AAS40691.1| flagellar basal-body rod protein FlgB [Bacillus cereus ATCC 10987]
          Length = 135

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        ++           
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKSNTTDLKTNADLYQTNEMH 72

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ +TN+LY  ++  I   + +
Sbjct: 73  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKTNQLYGISINAINTQYAI 128

Query: 125 MTTT 128
               
Sbjct: 129 NQAA 132


>gi|239834448|ref|ZP_04682776.1| flagellar basal body rod protein FlgF [Ochrobactrum intermedium LMG
           3301]
 gi|239822511|gb|EEQ94080.1| flagellar basal body rod protein FlgF [Ochrobactrum intermedium LMG
           3301]
          Length = 243

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 6/60 (10%)

Query: 79  PGHPVANAS------GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           P  PVA+ +      G+++  NV+ + E   +   +R +      + Q    ++  + +L
Sbjct: 179 PAQPVADDNSVGVVQGMIEGSNVDAMTEMTRLISVSRAFEQVNNLLAQQETTVSEAIKIL 238


>gi|144901061|emb|CAM77925.1| probable: Flagellar hook protein FlgE, gene: FLGE OR GSU0419
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 605

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E   M  T + Y  N    K + +M T   DL
Sbjct: 563 EASNVDIGQEFTKMIVTQKAYTTNATVFKTADEMTTVARDL 603



 Score = 40.3 bits (94), Expect = 0.080,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 7/52 (13%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           + + A++ +   S  M  IS+NI+N  TTG       Y+RK   F+ VM  S
Sbjct: 79  AMNNASTAMMATSWDMGSISQNISNVNTTG-------YKRKETLFKTVMSES 123


>gi|92116937|ref|YP_576666.1| flagellar basal body rod protein FlgF [Nitrobacter hamburgensis
           X14]
 gi|91799831|gb|ABE62206.1| flagellar basal body rod protein [Nitrobacter hamburgensis X14]
          Length = 255

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E + M E +R Y      ++Q  D+  + ++
Sbjct: 205 QGFIEKSNVNAVTEMSRMVEVSRAYTQMATLLQQQSDLQRSAIE 248


>gi|228914322|ref|ZP_04077937.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228845316|gb|EEM90352.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 138

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIANA T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 23  NTVSSNIANANTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEMH 75

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 76  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKVNQLYGISINAINTQYAI 131

Query: 125 MTTT 128
               
Sbjct: 132 NQAA 135


>gi|229189840|ref|ZP_04316851.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 10876]
 gi|228593648|gb|EEK51456.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 10876]
          Length = 147

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF--------- 73
             +S NIAN  T G       Y+ + ++F E M+ S  +        +S           
Sbjct: 32  NTVSSNIANGNTPG-------YKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNKMH 84

Query: 74  VEEFDPGHPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +  +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + +
Sbjct: 85  LPTVNTKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYAI 140

Query: 125 MTTT 128
               
Sbjct: 141 NQAA 144


>gi|114765248|ref|ZP_01444380.1| flagellar hook-associated protein K [Pelagibaca bermudensis
          HTCC2601]
 gi|114542383|gb|EAU45411.1| flagellar hook-associated protein K [Roseovarius sp. HTCC2601]
          Length = 470

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 7/58 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          LI + + A SG++  S   + +S NIANA           Y R+       + G+  V
Sbjct: 3  LITALNAARSGMSTSSRWAETVSTNIANANNAS-------YARRETQVTTNVQGAAQV 53


>gi|257866375|ref|ZP_05646028.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           EC30]
 gi|257873109|ref|ZP_05652762.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           EC10]
 gi|257875988|ref|ZP_05655641.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           EC20]
 gi|257800333|gb|EEV29361.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           EC30]
 gi|257807273|gb|EEV36095.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           EC10]
 gi|257810154|gb|EEV38974.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           EC20]
          Length = 120

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 48/132 (36%), Gaps = 23/132 (17%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMHG 57
           D L  + +++         R ++IS NIAN  T G       Y+ K I FE    + +  
Sbjct: 6   DLLKTAMNVSA-------QRAELISSNIANVNTDG-------YKAKRIVFESELKQALAS 51

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           SG     +  V Q       +    + + +G     NV++ VE  D       Y A    
Sbjct: 52  SGTDAATEASVSQVKPKITENATTSIKD-NGN----NVDLEVEMLDQAANGLYYSALTAQ 106

Query: 118 IKQSHDMMTTTL 129
           +     MM   L
Sbjct: 107 VNGRLQMMNLVL 118


>gi|114569239|ref|YP_755919.1| hypothetical protein Mmar10_0688 [Maricaulis maris MCS10]
 gi|114339701|gb|ABI64981.1| protein of unknown function DUF1078 domain protein [Maricaulis
           maris MCS10]
          Length = 461

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV++  E   +  T R Y A+ + I  + +M+   + + R
Sbjct: 421 SNVDLANEFTSLITTQRAYSASSKIITTADEMLDEAIRMKR 461



 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 7/51 (13%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           SGL   S  +  IS+NIAN  T G       Y+R +  F  +       +
Sbjct: 11 ASGLISNSNALASISDNIANVNTVG-------YKRASAVFTPLYDSDSSTK 54


>gi|315180484|gb|ADT87398.1| hypothetical flagellar basal-body rod protein [Vibrio furnissii
           NCTC 11218]
          Length = 244

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             FDP   VA  SG ++  NV+ L E   M    R Y   ++ +  + ++      LLR
Sbjct: 187 LAFDPE--VAVRSGYLEGSNVSSLDELVSMMALTRQYEMQVKAMASASEIEKMGNQLLR 243


>gi|308175273|ref|YP_003921978.1| flagellar hook-filament junction [Bacillus amyloliquefaciens DSM
          7]
 gi|307608137|emb|CBI44508.1| flagellar hook-filament junction [Bacillus amyloliquefaciens DSM
          7]
          Length = 505

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M         A   L+ Q   +  +S N+ANA T G       Y R+ ++ +  
Sbjct: 1  MPSTFMGLETARRALSAQQTALSTVSNNVANANTAG-------YTRQRVTLQST 47


>gi|319764536|ref|YP_004128473.1| flagellar basal-body rod protein flgb [Alicycliphilus denitrificans
           BC]
 gi|330826752|ref|YP_004390055.1| flagellar basal-body rod protein FlgB [Alicycliphilus denitrificans
           K601]
 gi|317119097|gb|ADV01586.1| flagellar basal-body rod protein FlgB [Alicycliphilus denitrificans
           BC]
 gi|329312124|gb|AEB86539.1| flagellar basal-body rod protein FlgB [Alicycliphilus denitrificans
           K601]
          Length = 138

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 28/143 (19%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L        + L ++S R + I+ NIANA T G       Y  +   F + +  + G 
Sbjct: 3   DKLTQRLDFHGNALLLRSERQRAIASNIANADTPG-------YVARDFQFADALRAAEGA 55

Query: 62  RVKKIGVDQSTFVEEFDPGH---PVAN------ASGIVKYPN-------VNVLVETADMR 105
           R       QS      DP H   P A+      A G             V++  E A   
Sbjct: 56  RAPGGMRQQS----VSDPRHIPLPAASTGQSGGALGYALQTQPSLDNNSVDMDRERAAFV 111

Query: 106 ETNRLYMANLQTIK-QSHDMMTT 127
           +    Y A L+ I   +  M++ 
Sbjct: 112 DNAVRYEATLRFINGNAKTMLSA 134


>gi|312112590|ref|YP_003990906.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
 gi|311217691|gb|ADP76295.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
          Length = 285

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NV++  E  DM  T R Y  N ++I  S  M+
Sbjct: 238 QGALEQSNVDLGTELTDMMITERSYQLNARSISISDQML 276



 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 13/69 (18%)

Query: 5  IASAHIANSGLAVQ-SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + S   A + +  Q   ++ +IS NIAN+ T G       ++R+  SF E++      + 
Sbjct: 4  LRSMITAANTM-AQLQQQLDVISNNIANSNTAG-------FKRRETSFGELLAQ----QF 51

Query: 64 KKIGVDQST 72
            +  D++ 
Sbjct: 52 TNLPQDEAP 60


>gi|154174192|ref|YP_001407320.1| flagellar hook protein FlgE [Campylobacter curvus 525.92]
 gi|112803531|gb|EAU00875.1| flagellar hook protein FlgE [Campylobacter curvus 525.92]
          Length = 819

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     D+    R + AN +TI  S +M+ T L L
Sbjct: 777 EASNVDLSRALTDLIVIQRGFQANSKTITTSDEMLNTLLQL 817



 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 7/56 (12%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          SGL      M +   NIAN  T G       Y+    +F +++  +  V     G 
Sbjct: 10 SGLQAHQIAMDVEGNNIANVNTYG-------YKYNRANFADILSQTPRVATAPQGE 58


>gi|4378857|gb|AAD19725.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 249

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDM---MTTTLDL 131
            NV       DM + +R Y  +++ +  +  +    T+ +D+
Sbjct: 206 SNVEPTQALVDMIQASRSYEQSVKMVATARQLDESSTSLMDI 247


>gi|304310787|ref|YP_003810385.1| Flagellar basal body FlaE [gamma proteobacterium HdN1]
 gi|301796520|emb|CBL44728.1| Flagellar basal body FlaE [gamma proteobacterium HdN1]
          Length = 447

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G ++  NV++  E   +    R + AN ++I+ ++ +    ++L
Sbjct: 402 AGALEVSNVDLTTELVGLITAQRNFQANAKSIETTNTVTNAIINL 446



 Score = 41.8 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/30 (46%), Positives = 19/30 (63%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +IA SGL    + +++ S NIAN  TTG
Sbjct: 2  SFNIAISGLKAAQSDLEVTSNNIANVATTG 31


>gi|207111880|ref|ZP_03246042.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 36

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 99  VETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            E  D+    R Y AN ++I+ +  M+ T   L R
Sbjct: 1   EEMTDLITAQRAYEANSKSIQTADAMLQTVNSLKR 35


>gi|78044505|ref|YP_359818.1| flagellar hook-associated protein FlgK [Carboxydothermus
          hydrogenoformans Z-2901]
 gi|77996620|gb|ABB15519.1| flagellar hook-associated protein 1 [Carboxydothermus
          hydrogenoformans Z-2901]
          Length = 473

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 21/81 (25%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------------- 52
          S   A S L  Q   + I S NIANA T G       Y R+ ++F               
Sbjct: 5  SLETALSSLRAQQLALDITSHNIANANTPG-------YTRQRVNFAPNTPFPVPSLFAPM 57

Query: 53 EVMHGSGGVRVKKIGVDQSTF 73
          +      GV V  I   + TF
Sbjct: 58 QPGQVGTGVVVASIERVRDTF 78


>gi|313681828|ref|YP_004059566.1| flagellar hook-associated protein flgk [Sulfuricurvum kujiense
          DSM 16994]
 gi|313154688|gb|ADR33366.1| flagellar hook-associated protein FlgK [Sulfuricurvum kujiense
          DSM 16994]
          Length = 615

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 25/75 (33%), Gaps = 14/75 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
          M  +  + HI  SGL      +     NI+NA T G       Y R+ +           
Sbjct: 1  MASIFNALHIGYSGLNAAQIGIDTTGHNISNAETEG-------YTRQRVVTAAAAPLGVD 53

Query: 56 --HGSGGVRVKKIGV 68
               GG +V  I  
Sbjct: 54 PGQRGGGTQVTDITR 68



 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V++  E A++      Y A  + I     MMTT L +
Sbjct: 577 VSIDEEMANLIRYQTSYGAAAKVITTIDQMMTTLLGI 613


>gi|229102342|ref|ZP_04233050.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-28]
 gi|229115184|ref|ZP_04244594.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-3]
 gi|228668324|gb|EEL23756.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-3]
 gi|228680989|gb|EEL35158.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-28]
          Length = 135

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 43/125 (34%), Gaps = 31/125 (24%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG-- 80
             +S NIANA T G       Y+ + ++F E M  S  +        +S     +     
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQMSKSSALYKNNAADLKSNPDL-YQTNEM 71

Query: 81  --------HPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                   +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + 
Sbjct: 72  HLPTVNMKNTYAKIQTKSMQKNQDGN----SVDVTTEMLDLMKANQLYGISINAINTQYA 127

Query: 124 MMTTT 128
           +    
Sbjct: 128 INQAA 132


>gi|213026536|ref|ZP_03340983.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
          Length = 110

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|326202856|ref|ZP_08192723.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens
           DSM 2782]
 gi|325986933|gb|EGD47762.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens
           DSM 2782]
          Length = 707

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 20/115 (17%)

Query: 23  QIISENIAN-------ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             +++ I+N         +TG+    + YR   +       G+GG+   +I   Q+T V 
Sbjct: 599 NTVAKQISNLRDVDILVNSTGNVSIDEYYRNLILEL-----GNGGMEADRIATSQATVV- 652

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                   A          V++  E ++M +    Y A+ + +     MM T + 
Sbjct: 653 ----NAVDAQRD---AISGVSMDEEMSNMMKYKFAYDASSRVLNVMDSMMETIIT 700


>gi|154687758|ref|YP_001422919.1| FlhP [Bacillus amyloliquefaciens FZB42]
 gi|154353609|gb|ABS75688.1| FlhP [Bacillus amyloliquefaciens FZB42]
          Length = 273

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 18/40 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             G ++  NV++  E   +  + R Y  N +TI     M+
Sbjct: 227 EQGALEGSNVDMSKEMTGLIVSQRSYQLNSRTITLGDQML 266



 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A++ L     +M  +S N++N+ TTG       Y+ +   F E++   
Sbjct: 1  MLRSMLTASTALHQLQQQMDTVSSNLSNSDTTG-------YKARDSRFSELIRQQ 48


>gi|295400718|ref|ZP_06810695.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294977299|gb|EFG52900.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 285

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NV++  E  DM  T R Y  N ++I  S  M+
Sbjct: 238 QGALEQSNVDLGTELTDMMITERSYQLNARSISISDQML 276



 Score = 34.1 bits (78), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 13/69 (18%)

Query: 5  IASAHIANSGLAVQ-SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + S   A + +  Q   ++ +IS NIAN+ T G       ++R+  SF E++      + 
Sbjct: 4  LRSMITAANTM-AQLQQQLDVISNNIANSNTAG-------FKRRETSFGELLAQ----QF 51

Query: 64 KKIGVDQST 72
            +  D++ 
Sbjct: 52 ANLPQDEAP 60


>gi|296122947|ref|YP_003630725.1| flagellar basal-body rod protein FlgG [Planctomyces limnophilus DSM
           3776]
 gi|296015287|gb|ADG68526.1| flagellar basal-body rod protein FlgG [Planctomyces limnophilus DSM
           3776]
          Length = 266

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV    E  D+ +T R    N Q I+ S  ++    +L R
Sbjct: 219 QGFLEISNVEPANELVDLIKTQRNVELNSQVIQASDQLLQLITNLRR 265



 Score = 40.7 bits (95), Expect = 0.072,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 7/54 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          L  + + A SG+      +  I+ N+ANA T G       ++R    FE++ + 
Sbjct: 2  LYRAMYTAASGMQAYMFNLDTIANNLANAGTNG-------FKRSRTDFEDLYYQ 48


>gi|169826608|ref|YP_001696766.1| flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
 gi|168991096|gb|ACA38636.1| Flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
          Length = 280

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
            ++  NV+      D+    R + AN + ++     M     ++ +
Sbjct: 234 FLEGSNVDSGRAMTDLMTAYRAFEANQKVLQAYDRSMEKAVNEIGK 279



 Score = 37.2 bits (86), Expect = 0.77,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L    +   +G+  Q  R +++S N+ANA T G        R    SF +++  S G
Sbjct: 1  MISLFKGFYTVATGMITQQRRTELLSNNLANANTPGFKADQSTIR----SFPDMLMSSIG 56


>gi|157147096|ref|YP_001454415.1| flagellar hook-associated protein FlgK [Citrobacter koseri ATCC
          BAA-895]
 gi|157084301|gb|ABV13979.1| hypothetical protein CKO_02873 [Citrobacter koseri ATCC BAA-895]
          Length = 461

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 24/64 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +IA SGL      M + S NIAN  T G +             E       GV+V 
Sbjct: 1  MSMINIAFSGLQAAQVGMNVTSMNIANLLTPGYSRQGIIQSSIGPMGEAGFTAGNGVQVD 60

Query: 65 KIGV 68
           I  
Sbjct: 61 SIRR 64


>gi|332994165|gb|AEF04220.1| flagellar basal-body rod protein FlgB [Alteromonas sp. SN2]
          Length = 143

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 7/50 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          S LA+++ RM++IS N+ANA T G       Y+ K I F + M  +   +
Sbjct: 14 SALAIRTDRMEVISGNLANANTPG-------YKAKDIDFNKAMESAMSAQ 56


>gi|213616339|ref|ZP_03372165.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-2068]
          Length = 187

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          S   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|223038348|ref|ZP_03608642.1| flagellar hook protein FlgE [Campylobacter rectus RM3267]
 gi|222880205|gb|EEF15292.1| flagellar hook protein FlgE [Campylobacter rectus RM3267]
          Length = 784

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R + AN +TI  S +M+ T L L
Sbjct: 743 EMSNVDLSRSLTQLIVVQRGFQANSKTITTSDEMLNTLLQL 783


>gi|254445148|ref|ZP_05058624.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
 gi|198259456|gb|EDY83764.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
          Length = 510

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E A+M  T R + A  + I  S D++   ++L R
Sbjct: 463 QQGALELSNVDLTNEFANMITTQRGFQAGSRIITVSDDILQEVVNLKR 510


>gi|37360906|dbj|BAC98360.1| flagellar hook protein [Burkholderia glumae]
          Length = 40

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    R Y AN QTIK    +  T L+L
Sbjct: 2   STVDLTGELVNLITAQRNYQANAQTIKTQQTVDQTLLNL 40


>gi|239828562|ref|YP_002951186.1| hypothetical protein GWCH70_3280 [Geobacillus sp. WCH70]
 gi|239808855|gb|ACS25920.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           WCH70]
          Length = 283

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NV++  E  DM  T R Y  N + I  S  M+
Sbjct: 236 QGALEQSNVDLGAELTDMMITERSYQLNARAISLSDQML 274



 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 9/53 (16%)

Query: 4  LIASAHIANSGLAVQ-SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S   A + +  Q   ++ +IS NIAN+ TTG       ++R+  +F E++
Sbjct: 1  MLRSMITAANTM-AQLGQQLDVISNNIANSNTTG-------FKRRETNFGELL 45


>gi|168703389|ref|ZP_02735666.1| hypothetical protein GobsU_27906 [Gemmata obscuriglobus UQM 2246]
          Length = 430

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------VMHGS 58
          + +  + +SGL   S+ + +I  N+AN  TTG       +R   + ++          G+
Sbjct: 3  LNALFVGSSGLTTNSSALDVIGNNLANINTTGYKDQRMVFR--DVVYQTLSSGTSADAGT 60

Query: 59 GGVRVKKIG 67
          GGV   ++G
Sbjct: 61 GGVNPTQVG 69



 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++ +E + +    R +  N +TI  ++D +    +++R
Sbjct: 385 GALESSNVDIAIEFSRLIVAQRGFQVNARTISSTNDTLQELANIIR 430


>gi|121596114|ref|YP_988010.1| flagellar basal-body rod protein FlgB [Acidovorax sp. JS42]
 gi|120608194|gb|ABM43934.1| flagellar basal-body rod protein FlgB [Acidovorax sp. JS42]
          Length = 151

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 49/143 (34%), Gaps = 28/143 (19%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D +        S L ++S R + I+ NIANA T G       Y  +   F + M      
Sbjct: 16  DKMTNRLDFHGSALLLRSERQRAIASNIANADTPG-------YVARDFKFADAMRAVNEA 68

Query: 62  RVKKIGVDQSTFVEEFDPGH---PVANAS------GIVKYPN-------VNVLVETADMR 105
           +       QS      DP H   P A +       G             V++  E A   
Sbjct: 69  QAPSPLRSQS----VSDPRHIPLPAAASGSSDSTLGYALQTQPSLDNNTVDMDRERAAFV 124

Query: 106 ETNRLYMANLQTIK-QSHDMMTT 127
           +    Y A L+ I  QS  M++ 
Sbjct: 125 DNAVRYEATLRFINGQSKTMLSA 147


>gi|254520946|ref|ZP_05133001.1| flagellar basal-body rod protein FlgF [Stenotrophomonas sp. SKA14]
 gi|219718537|gb|EED37062.1| flagellar basal-body rod protein FlgF [Stenotrophomonas sp. SKA14]
          Length = 249

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 78  DPGHPVANASG------IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           DP  P A A G       ++  NV+       M +  R Y   +Q IK   D   +   L
Sbjct: 185 DPQQPFAPAQGTAVHSGQLEGSNVDAAGALVQMIQLQRQYEMQVQVIKHGDDNARSANSL 244

Query: 132 LR 133
           LR
Sbjct: 245 LR 246


>gi|23092315|gb|AAN08640.1| FlgE [Aeromonas hydrophila]
          Length = 453

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  +  ++    R + AN ++++ +  +  T L +
Sbjct: 412 EQSNVDLTSQLVNLITAQRNFQANSRSLEVNSSLQQTILQI 452



 Score = 36.8 bits (85), Expect = 0.99,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S + A SG+      + + + NIAN  + G
Sbjct: 2  SFNNALSGVNAAQKDLNVTANNIANVNSIG 31


>gi|84514827|ref|ZP_01002190.1| FlgK flagellar hook-associated protein 1 [Loktanella
          vestfoldensis SKA53]
 gi|84510986|gb|EAQ07440.1| FlgK flagellar hook-associated protein 1 [Loktanella
          vestfoldensis SKA53]
          Length = 1421

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          + +   I  S +  Q   + +  +NI NA T G       YRR+  +  EV 
Sbjct: 1  MASLLDIGRSAVQAQREALNVTGQNIVNANTEG-------YRRRDATLTEVY 45


>gi|56551506|ref|YP_162345.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241761150|ref|ZP_04759239.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260752887|ref|YP_003225780.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|56543080|gb|AAV89234.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374769|gb|EER64230.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552250|gb|ACV75196.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 249

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDM---MTTTLDL 131
            NV       DM + +R Y  +++ +  +  +    T+ +D+
Sbjct: 206 SNVEPTQALVDMIQASRSYEQSVKMVATARQLDESSTSLMDI 247


>gi|254785371|ref|YP_003072800.1| flagellar basal body protein FlgE [Teredinibacter turnerae T7901]
 gi|237685119|gb|ACR12383.1| Flagellar basal body protein FlgE [Teredinibacter turnerae T7901]
          Length = 813

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  SG ++  NV++  E   +    R + A+ +TI+ +  +  T ++L
Sbjct: 765 AIQSGALEESNVDLSEELVRLIIAQRNFQASAKTIETADQVTQTIINL 812



 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 17/71 (23%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI----SFEEVMHGSG---- 59
           + A SG+   S  + +   NIANA T G       ++R        F   + G+G    
Sbjct: 3  FNTALSGIRAASTDLTVTGNNIANASTIG-------FKRSRAEFGDVFATSVLGAGANAI 55

Query: 60 --GVRVKKIGV 68
            GV+V+ +  
Sbjct: 56 GSGVQVEDVAQ 66


>gi|239995128|ref|ZP_04715652.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii ATCC
          27126]
          Length = 144

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          S L +++ RM++IS N+ANA T G       Y+ + I F + M  +
Sbjct: 14 SALTIRTERMEVISGNLANANTPG-------YKARDIDFNKAMQSA 52


>gi|217972599|ref|YP_002357350.1| flagellar basal body rod protein FlgF [Shewanella baltica OS223]
 gi|217497734|gb|ACK45927.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS223]
          Length = 247

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|153001471|ref|YP_001367152.1| flagellar basal body rod protein FlgF [Shewanella baltica OS185]
 gi|160876202|ref|YP_001555518.1| flagellar basal body rod protein FlgF [Shewanella baltica OS195]
 gi|151366089|gb|ABS09089.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS185]
 gi|160861724|gb|ABX50258.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS195]
 gi|315268392|gb|ADT95245.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS678]
          Length = 247

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|4580018|gb|AAD24206.1|AF049342_4 flagellar hook protein FlgE [Treponema denticola ATCC 33520]
          Length = 237

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 11/58 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L +      +G+     RM +I  N+AN  TTG       ++R  ++F++++   
Sbjct: 2  MRSLFSGV----TGMQNHQTRMDVIGNNVANVNTTG-------FKRGRVNFQDLISQQ 48


>gi|157165263|ref|YP_001467845.1| flagellar hook protein FlgE [Campylobacter concisus 13826]
 gi|112801725|gb|EAT99069.1| flagellar hook protein FlgE [Campylobacter concisus 13826]
          Length = 814

 Score = 42.6 bits (100), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     D+    R + AN +TI  S +M+ T L L
Sbjct: 772 EASNVDLSRALTDLIVIQRGFQANSKTITTSDEMLNTLLQL 812


>gi|209884509|ref|YP_002288366.1| flagellar basal body FlaE domain protein [Oligotropha
           carboxidovorans OM5]
 gi|209872705|gb|ACI92501.1| flagellar basal body FlaE domain protein [Oligotropha
           carboxidovorans OM5]
          Length = 602

 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  N ++  E   +  T + Y AN + I  S+ M+   L++LR
Sbjct: 560 EGSNTDIADEFTKLIVTQQAYSANTKVITTSNQMVQDLLNVLR 602



 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  +   + +GL  QS  ++ IS NIAN++TT 
Sbjct: 3  IFGALTTSVAGLRSQSYALENISGNIANSQTTA 35


>gi|77918761|ref|YP_356576.1| flagellar basal body rod protein [Pelobacter carbinolicus DSM 2380]
 gi|77544844|gb|ABA88406.1| flagellar basal body rod protein [Pelobacter carbinolicus DSM 2380]
          Length = 245

 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 23/46 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVN++ E + M E+ R++ A  + +K  H +      L 
Sbjct: 197 QGQLERSNVNLMQEMSHMVESTRVFEACQKMLKTYHSIAAEANKLG 242


>gi|119899026|ref|YP_934239.1| flagellar basal-body rod protein FlgF [Azoarcus sp. BH72]
 gi|119671439|emb|CAL95352.1| flagellar basal-body rod protein FlgF [Azoarcus sp. BH72]
          Length = 245

 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 17/38 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           A G ++  NVNV+ +   M    R +    + ++ +  
Sbjct: 196 AGGYLEGSNVNVVDQMVTMISLARQFEMQTRMLQTAEQ 233


>gi|92116886|ref|YP_576615.1| flagellar basal body FlaE [Nitrobacter hamburgensis X14]
 gi|91799780|gb|ABE62155.1| flagellar basal body FlaE [Nitrobacter hamburgensis X14]
          Length = 615

 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 78  DPGHPV-ANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           D   P  A A+G +     +  N ++  E   +  T + Y AN + I  ++ M+   L++
Sbjct: 554 DESGPAIAGAAGHINGSSLEGSNTDIADEFTKLIVTQQAYSANTKVITTANSMVQDLLNV 613

Query: 132 LR 133
           LR
Sbjct: 614 LR 615



 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  + + +  GL  QS  +Q IS NIANA+TTG
Sbjct: 3  IFDALNTSVGGLQAQSFALQNISGNIANAQTTG 35


>gi|304409977|ref|ZP_07391596.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS183]
 gi|307302310|ref|ZP_07582068.1| flagellar basal-body rod protein FlgF [Shewanella baltica BA175]
 gi|304351386|gb|EFM15785.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS183]
 gi|306914348|gb|EFN44769.1| flagellar basal-body rod protein FlgF [Shewanella baltica BA175]
          Length = 247

 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|167623362|ref|YP_001673656.1| flagellar basal body rod protein FlgF [Shewanella halifaxensis
           HAW-EB4]
 gi|167353384|gb|ABZ75997.1| flagellar basal-body rod protein FlgF [Shewanella halifaxensis
           HAW-EB4]
          Length = 247

 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG V+  NVN + E   M +  R +   ++ +K + +    +  L+R
Sbjct: 199 SGAVEGSNVNAVHEMVSMIDLQRQFEMQVKMMKTAEENDRASSSLMR 245


>gi|50120636|ref|YP_049803.1| flagellar basal body rod protein FlgB [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611162|emb|CAG74608.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 138

 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 21/124 (16%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQSTF 73
           L  Q    +I++ NIANA T G       Y+ + I F   +  +    RV   G+   T 
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFASQLSKTMEQGRVNGTGIALKTT 68

Query: 74  VEEFDPGHPVANA--SGIVKYPN--------VNVLVETADMRETNRLYMANLQTI-KQSH 122
                P           + + P+        V++  E  +  + +  Y  NL  +  Q  
Sbjct: 69  SVRHIPAQSFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKYQTNLTVLGGQIK 128

Query: 123 DMMT 126
            MM+
Sbjct: 129 GMMS 132


>gi|126175145|ref|YP_001051294.1| flagellar basal body rod protein FlgF [Shewanella baltica OS155]
 gi|125998350|gb|ABN62425.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS155]
          Length = 247

 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|126697802|ref|YP_001086699.1| putative flagellar hook-associated protein [Clostridium difficile
          630]
 gi|115249239|emb|CAJ67052.1| Flagellar hook-associated protein FlgK (or HAP1) [Clostridium
          difficile]
          Length = 436

 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M  L +  + ANSG+      +Q IS NI+N  T G       Y R+   F  
Sbjct: 1  MAGLFSILNTANSGMNAHQKSIQTISHNISNLDTDG-------YSRQRTEFAT 46



 Score = 37.6 bits (87), Expect = 0.51,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 16/33 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             V++  E  ++ +  R Y A+ + +  +  ++
Sbjct: 396 SGVSLDEEMTELMKVQRSYQASAKVMSTAVQLL 428


>gi|325111113|ref|YP_004272181.1| flagellar basal-body rod protein FlgG [Planctomyces brasiliensis
           DSM 5305]
 gi|324971381|gb|ADY62159.1| flagellar basal-body rod protein FlgG [Planctomyces brasiliensis
           DSM 5305]
          Length = 267

 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 18/40 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G ++  NV  + E  ++ +T R    N + +K    M+ 
Sbjct: 220 QGFLETSNVEPVRELVELIKTQRNVELNSEAMKAGDQMLQ 259



 Score = 41.1 bits (96), Expect = 0.058,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 7/46 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          A SG+     ++ +I+ N+AN+ TTG       ++R    FE++ +
Sbjct: 9  AASGMEASLFQLDVIANNLANSGTTG-------FKRSRAEFEDLFY 47


>gi|237653582|ref|YP_002889896.1| flagellar basal-body rod protein FlgF [Thauera sp. MZ1T]
 gi|237624829|gb|ACR01519.1| flagellar basal-body rod protein FlgF [Thauera sp. MZ1T]
          Length = 246

 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 16/38 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           A G ++  NVNV+ +   M    R +    + +  +  
Sbjct: 196 AGGYLEGSNVNVVDQMVQMISLARQFEMQTRMLSTAEQ 233


>gi|171321213|ref|ZP_02910183.1| protein of unknown function DUF1078 domain protein [Burkholderia
          ambifaria MEX-5]
 gi|171093523|gb|EDT38693.1| protein of unknown function DUF1078 domain protein [Burkholderia
          ambifaria MEX-5]
          Length = 258

 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 10/59 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M+ L     I  +GLA Q   +   ++NIAN  T         ++R  ++F  ++    
Sbjct: 1  MNNLFY---IGATGLAAQQTAVDTTAQNIANLNTPA-------FKRGAVTFSTLLSSGA 49



 Score = 33.7 bits (77), Expect = 9.0,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G  +  NV +  E A +    R Y A+ + ++   ++M     L R
Sbjct: 211 AQGFSEASNVALADELAGLMLYQRAYAASAKLVQAGDELMAIANGLKR 258


>gi|312879580|ref|ZP_07739380.1| flagellar basal-body rod protein FlgB [Aminomonas paucivorans DSM
           12260]
 gi|310782871|gb|EFQ23269.1| flagellar basal-body rod protein FlgB [Aminomonas paucivorans DSM
           12260]
          Length = 134

 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 16/124 (12%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVKKIGVD---QSTF 73
           S RM   ++N+ANA T         Y R+ +SFE+ +        R+     D    +  
Sbjct: 18  SRRMGSTTQNLANANTPK-------YVRREVSFEDQLEALIEAPRRLPLAVTDGHHMTNM 70

Query: 74  VEEFDPGHPVANASGI----VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +  +  HPV +  G         NV+   E A + ET  +Y A  + + +   M  T +
Sbjct: 71  PKGIEFVHPVESRVGNEVYRYDENNVDPETELARLAETRMMYQAMTRILGRKLSMYRTAI 130

Query: 130 DLLR 133
              R
Sbjct: 131 GGGR 134


>gi|126463751|ref|YP_001044865.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides ATCC
           17029]
 gi|332559807|ref|ZP_08414129.1| FlgB2 [Rhodobacter sphaeroides WS8N]
 gi|126105415|gb|ABN78093.1| flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides ATCC
           17029]
 gi|332277519|gb|EGJ22834.1| FlgB2 [Rhodobacter sphaeroides WS8N]
          Length = 127

 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 20/117 (17%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKT-ISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
            R ++++ N+ANA T G       YR +    FE    G+ G+R  + G  +S      D
Sbjct: 20  LRTEVVAHNLANADTPG-------YRAQDLPEFESYASGTVGLRTTRPGHLRSAEASAAD 72

Query: 79  P---GHPVANASGIVKYPNVNVL---VETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           P     P A +      PN N +    E        + +   L   + S  ++ T+L
Sbjct: 73  PVPVEGPGAAS------PNGNTVSLEDEMVRAVAARQQHEMALAIYQSSSRLIRTSL 123


>gi|323703166|ref|ZP_08114819.1| flagellar basal-body rod protein FlgB [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531825|gb|EGB21711.1| flagellar basal-body rod protein FlgB [Desulfotomaculum nigrificans
           DSM 574]
          Length = 132

 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 19/120 (15%)

Query: 1   MDYLIASA-HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS- 58
           MD   +   ++   GL   + R ++I+ N+AN  T G       +++  +SFEE +  + 
Sbjct: 1   MDIFNSPMFNLLQRGLDASALRQRVIANNVANLNTPG-------FKKSYVSFEEQLKAAM 53

Query: 59  -------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   G     IGV       E      V + +      NV++  E  ++  T   Y
Sbjct: 54  ESGGGPLKGTHPLHIGVSNMDVKPEVKQ---VKDTTMRYDGNNVDIDEEMVNLAATTIEY 110


>gi|218886714|ref|YP_002436035.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
          str. 'Miyazaki F']
 gi|218757668|gb|ACL08567.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
          str. 'Miyazaki F']
          Length = 690

 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 7/60 (11%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L +  +I +S L+     + + S N+ANA  TG       Y R+T+ +      S G
Sbjct: 1  MSSLNSIFNIGSSALSNAQIGISVTSNNLANADVTG-------YSRQTVQYTTGPTVSSG 53


>gi|262404539|ref|ZP_06081094.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC586]
 gi|262349571|gb|EEY98709.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC586]
          Length = 249

 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 84  ANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A+A+     G ++  NVN + E   + +  R +   ++ +  + +M  ++  LLR
Sbjct: 193 ADANVKVLTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDSLLR 247


>gi|75675292|ref|YP_317713.1| flagellar basal body rod protein, FlaE [Nitrobacter winogradskyi
           Nb-255]
 gi|74420162|gb|ABA04361.1| Flagellar basal body rod protein, FlaE [Nitrobacter winogradskyi
           Nb-255]
          Length = 613

 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  N ++  E   +  T + Y AN + I  ++ M+   L++LR
Sbjct: 571 EGSNADIADEFTKLIVTQQAYSANTKVITTANSMVQDLLNVLR 613



 Score = 41.5 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  + + +  GL  QS  +Q IS NIANA+TTG
Sbjct: 3  IFDALNTSVGGLQAQSFALQNISGNIANAQTTG 35


>gi|328545490|ref|YP_004305599.1| flagellar hook-associated protein K [polymorphum gilvum
          SL003B-26A1]
 gi|326415231|gb|ADZ72294.1| Flagellar hook-associated protein K [Polymorphum gilvum
          SL003B-26A1]
          Length = 496

 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 10/70 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          L  +  +A S LA +      +S NIA A+     PG   Y RK++    V+  S   GG
Sbjct: 3  LSVALQVAQSALAARQTETATVSRNIAGAQ----DPG---YTRKSVVLSTVVSASGQTGG 55

Query: 61 VRVKKIGVDQ 70
          VRV  I    
Sbjct: 56 VRVDGIARTT 65


>gi|238927618|ref|ZP_04659378.1| possible flagellar basal-body rod protein [Selenomonas flueggei
           ATCC 43531]
 gi|238884543|gb|EEQ48181.1| possible flagellar basal-body rod protein [Selenomonas flueggei
           ATCC 43531]
          Length = 266

 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G+++  N +V+ E  ++    R+Y A  + ++    ++   + D+ R
Sbjct: 216 EQGMLEMSNTSVVTEMVELINNYRVYEAGSKAVQTQDTLLDKAVNDVGR 264



 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +    +IA SG+  ++    +I+ N+ANA TTG
Sbjct: 1  MWRGLYIAASGMITETKHTDMIANNLANAATTG 33


>gi|20807892|ref|NP_623063.1| flagellar basal body protein [Thermoanaerobacter tengcongensis
          MB4]
 gi|20516457|gb|AAM24667.1| Flagellar basal body protein [Thermoanaerobacter tengcongensis
          MB4]
          Length = 131

 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          GL   + R  +I+ NIAN  T         ++R  + FEE++  +
Sbjct: 11 GLYAATVRSNVIANNIANVDTPN-------FKRSEVKFEEILQEA 48


>gi|15606898|ref|NP_214279.1| flagellar hook protein FlgE [Aquifex aeolicus VF5]
 gi|6225343|sp|O67711|FLGE_AQUAE RecName: Full=Flagellar hook protein flgE
 gi|2984140|gb|AAC07675.1| flagellar hook protein FlgE [Aquifex aeolicus VF5]
          Length = 482

 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          ++ S + A +G+ V    + + S+N+ANA T G       +++    F+++
Sbjct: 1  MLRSFYNAITGMDVSRFALDVTSDNLANANTVG-------FKKSRPIFQDM 44



 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 6/23 (26%), Positives = 11/23 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYM 112
           V+  NV++  E  ++    R Y 
Sbjct: 455 VEMSNVDIAKEFINLITAQRTYQ 477


>gi|78777302|ref|YP_393617.1| flagellar basal body rod protein [Sulfurimonas denitrificans DSM
          1251]
 gi|78497842|gb|ABB44382.1| Flagellar basal body rod protein [Sulfurimonas denitrificans DSM
          1251]
          Length = 276

 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPG 40
          + +G+  Q  R+  I+ N+AN  T G    
Sbjct: 8  SAAGMVTQFNRLDTIANNLANVNTVGFKED 37


>gi|149191159|ref|ZP_01869417.1| putative flagellar hook-associated protein [Vibrio shilonii AK1]
 gi|148834997|gb|EDL51976.1| putative flagellar hook-associated protein [Vibrio shilonii AK1]
          Length = 459

 Score = 42.2 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 15/68 (22%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GG 60
          +I  SG+      +   ++N AN  T G       Y R+ +S E    G+         G
Sbjct: 5  NIGLSGVLANRVALNTTAQNTANVNTPG-------YSRQVVSLEATSSGNFVNGINLGAG 57

Query: 61 VRVKKIGV 68
          V V  I  
Sbjct: 58 VEVGDIIR 65



 Score = 38.0 bits (88), Expect = 0.48,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             VN   E A+M      Y AN++ I  ++ M  T L
Sbjct: 420 SAVNSDEEAANMLLYLNAYEANMKVISTANQMFQTLL 456


>gi|170751911|ref|YP_001758171.1| hypothetical protein Mrad2831_5543 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170658433|gb|ACB27488.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium radiotolerans JCM 2831]
          Length = 461

 Score = 42.2 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  N ++  E + M  T + Y AN + +  +  MM+  L+++R
Sbjct: 419 EQSNTDIASEFSKMIVTQQAYSANTRVMSTAQTMMSDLLNVIR 461



 Score = 40.3 bits (94), Expect = 0.081,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 8/55 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          MD L ++   + SGL  QS  +  IS NIAN++TTG       Y+R   SF ++M
Sbjct: 1  MD-LFSALQTSVSGLQSQSYAISNISGNIANSQTTG-------YKRIDTSFVDLM 47


>gi|311992327|gb|ADQ26737.1| proximal rod protein [Aeromonas hydrophila]
          Length = 247

 Score = 42.2 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V  +   Q       D  +  A+A     +G ++  NVNV+ E  ++    R +   ++ 
Sbjct: 170 VDAVEKGQDGLFRRKDGQNEAASATVGLIAGSLEGSNVNVVDEMTNLIRLQRQFETQVKI 229

Query: 118 IKQSHDMMTTTLDLLR 133
           +K + +       LLR
Sbjct: 230 MKTAEENDEAQTQLLR 245


>gi|258621050|ref|ZP_05716084.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM573]
 gi|258625278|ref|ZP_05720186.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM603]
 gi|262166281|ref|ZP_06034018.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM223]
 gi|262170826|ref|ZP_06038504.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451]
 gi|258582451|gb|EEW07292.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM603]
 gi|258586438|gb|EEW11153.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM573]
 gi|261891902|gb|EEY37888.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451]
 gi|262025997|gb|EEY44665.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM223]
          Length = 249

 Score = 42.2 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NVN + E   + +  R +   ++ +  + +M  ++  LLR
Sbjct: 201 TGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDSLLR 247


>gi|83719411|ref|YP_440801.1| flagellar hook protein FlgE [Burkholderia thailandensis E264]
 gi|167617585|ref|ZP_02386216.1| flagellar hook protein FlgE [Burkholderia thailandensis Bt4]
 gi|257140548|ref|ZP_05588810.1| flagellar hook protein FlgE [Burkholderia thailandensis E264]
 gi|83653236|gb|ABC37299.1| flagellar hook protein FlgE [Burkholderia thailandensis E264]
          Length = 413

 Score = 42.2 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +   +    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S+ + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASSDLDVIGNNIANANTVG-------FKGSTAQFSDMYANSVASAVNNPIGIGTM 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G         +   N +G  +  N
Sbjct: 61 LASVQQQFSQGTITSSTSSLNVAINGNGFFQMSN 94


>gi|157961172|ref|YP_001501206.1| flagellar basal body rod protein FlgF [Shewanella pealeana ATCC
           700345]
 gi|157846172|gb|ABV86671.1| flagellar basal-body rod protein FlgF [Shewanella pealeana ATCC
           700345]
          Length = 247

 Score = 42.2 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG V+  NVN + E   M +  R +   ++ +K + +    +  L+R
Sbjct: 199 SGAVEGSNVNAVHEMVSMIDLQRQFEMQVKMMKTAEENDRASSSLMR 245


>gi|299131804|ref|ZP_07024999.1| fagellar hook-basal body protein [Afipia sp. 1NLS2]
 gi|298591941|gb|EFI52141.1| fagellar hook-basal body protein [Afipia sp. 1NLS2]
          Length = 604

 Score = 42.2 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  N ++  E   +  T + Y AN + I  S+ M+   L++LR
Sbjct: 562 EGSNTDIADEFTKLIVTQQAYSANTKVITTSNQMVQDLLNVLR 604



 Score = 33.7 bits (77), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  +   + +GL  QS  ++ IS NIAN++TT 
Sbjct: 3  IFGALTTSVAGLRSQSYALENISGNIANSQTTA 35


>gi|94495414|ref|ZP_01301994.1| flagellar proximal rod protein [Sphingomonas sp. SKA58]
 gi|94424802|gb|EAT09823.1| flagellar proximal rod protein [Sphingomonas sp. SKA58]
          Length = 123

 Score = 42.2 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 14/80 (17%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------GSGG 60
            I    LA++S R+ +++ NIANA     TPG   Y+ + I FE  +        G+  
Sbjct: 8  FGIHGKALALRSQRLSLLASNIANA----STPG---YKARDIDFEAALKEATAQSSGATS 60

Query: 61 VRVKKIGVDQSTFVEEFDPG 80
            + K   D   +     P 
Sbjct: 61 TDMGKAVEDAMGYRVPLQPS 80


>gi|91976147|ref|YP_568806.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          BisB5]
 gi|91682603|gb|ABE38905.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
          BisB5]
          Length = 623

 Score = 42.2 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  +  IA +GL    A M ++S N+ANA T G       Y RKT+       G  G  V
Sbjct: 3  LGDALSIAMAGLRANQASMSLVSSNVANAETPG-------YVRKTVDQITTTAGPSGSGV 55

Query: 64 KKIGV 68
            IGV
Sbjct: 56 SIIGV 60



 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 16/44 (36%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                 VN+  E A +      Y AN + +   + M    + ++
Sbjct: 580 YSTSSGVNMDEEMAHLLSLQNAYSANARVMSTVNQMYQALMQVM 623


>gi|27380965|ref|NP_772494.1| hypothetical protein bll5854 [Bradyrhizobium japonicum USDA 110]
 gi|27354131|dbj|BAC51119.1| bll5854 [Bradyrhizobium japonicum USDA 110]
          Length = 754

 Score = 42.2 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  N ++  E   +  T + Y AN + I  ++ M+   L++LR
Sbjct: 712 EGSNTDIADEFTKLIVTQQAYSANTKVITTANSMVQDLLNVLR 754



 Score = 38.4 bits (89), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  + + +  GL  QS  +Q IS NIAN+ TTG
Sbjct: 3  IFDAMNTSVGGLQAQSYALQNISGNIANSSTTG 35


>gi|328958264|ref|YP_004375650.1| putative flagellar basal-body rod protein [Carnobacterium sp. 17-4]
 gi|328674588|gb|AEB30634.1| putative flagellar basal-body rod protein [Carnobacterium sp. 17-4]
          Length = 252

 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 21/42 (50%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV  + E  ++ + +R + AN + +  + + +   ++
Sbjct: 206 YLEASNVQTVDEITNLMQVSREFEANQKALSAADETLRKAVN 247


>gi|289661699|ref|ZP_06483280.1| hypothetical protein XcampvN_01015 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 98

 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 31/128 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+ V + R Q+ + N+A            P  R+++        +GGV   
Sbjct: 1   MSISSIASSGMQVAALRQQVAASNVA-----RQPVDGSP--RQSV--AASTQANGGVAAN 51

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +           DP  P ++                 +       + AN   +++S +M
Sbjct: 52  VVNASA-------DPSAPASD---------------LVEGLSARNDFQANANVLRRSDEM 89

Query: 125 MTTTLDLL 132
           + + LD+L
Sbjct: 90  LGSLLDVL 97


>gi|152983100|ref|YP_001353453.1| flagellar basal-body rod protein FlgB [Janthinobacterium sp.
          Marseille]
 gi|151283177|gb|ABR91587.1| flagellar basal-body rod protein FlgB [Janthinobacterium sp.
          Marseille]
          Length = 141

 Score = 42.2 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 7/40 (17%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          S R+++++ NIANA T         Y+ + I F+  ++ +
Sbjct: 30 SKRLEVVASNIANADTPN-------YKARDIDFKTALNRA 62


>gi|114566382|ref|YP_753536.1| hypothetical protein Swol_0846 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337317|gb|ABI68165.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 138

 Score = 42.2 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 25/130 (19%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            + V + R  +I++NIANA T         ++R+ + FEE M  +      ++G++ +  
Sbjct: 17  AMDVGTLRNDVIADNIANADTPK-------FKRREVIFEEKMKKALEGTTDQLGLNLTNS 69

Query: 74  VEEFDPGHPVANASGIVKY----------PNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                 G+ + +    V+            NV++  E A M +    Y A       S  
Sbjct: 70  RHIQMEGNNM-DIEPEVRVLEDLTFRNDENNVDIDNEMAKMTKNKINYDA------VSRS 122

Query: 124 MMTTTLDLLR 133
           M    + LLR
Sbjct: 123 MSNE-IRLLR 131


>gi|301631994|ref|XP_002945076.1| PREDICTED: flagellar basal-body rod protein flgB-like [Xenopus
           (Silurana) tropicalis]
          Length = 141

 Score = 42.2 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 27/130 (20%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L  +  R  +I+ NIANA T G       Y  +   F + +  +       +     T  
Sbjct: 18  LRAERQR--VIASNIANADTPG-------YVARDFRFADALRAATDDGTALVRQRLGTDG 68

Query: 75  EEFDPGH---PVANAS------GIV--KYPN-----VNVLVETADMRETNRLYMANLQTI 118
                GH   P A         G      PN     V++  E A+  +    Y A L+ I
Sbjct: 69  TRHA-GHIRLPAARTGEQPGTLGYAVQTQPNLDRNTVDMDRERANFVDNAVHYEATLRFI 127

Query: 119 K-QSHDMMTT 127
              +  M++ 
Sbjct: 128 NGNAKTMLSA 137


>gi|117619148|ref|YP_857342.1| flagellar basal-body rod protein FlgF [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560555|gb|ABK37503.1| flagellar basal-body rod protein FlgF [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 248

 Score = 42.2 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V  +   Q       D  +  A+A     +G ++  NVNV+ E  ++    R +   ++ 
Sbjct: 171 VDAVEKGQDGLFRRKDGQNEAASATVGLIAGSLEGSNVNVVDEMTNLIRLQRQFETQVKI 230

Query: 118 IKQSHDMMTTTLDLLR 133
           +K + +       LLR
Sbjct: 231 MKTAEENDEAQTQLLR 246


>gi|52841451|ref|YP_095250.1| flagellar hook protein FlgE [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628562|gb|AAU27303.1| flagellar hook protein FlgE [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 437

 Score = 42.2 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E   +    R + AN QTI+    +  T +++
Sbjct: 392 SGRLEESNVDLTGELVKLINAQRNFQANAQTIRTGDAITQTIINI 436


>gi|88858146|ref|ZP_01132788.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas tunicata
          D2]
 gi|88819763|gb|EAR29576.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas tunicata
          D2]
          Length = 134

 Score = 42.2 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           +  I  + +  +  R ++++ NIANA T G       Y+ K I F + +  +   +  +
Sbjct: 7  KAFGIHPNAMLARVQRAEVLASNIANADTPG-------YKAKDIDFAQALKSAKSAQSSQ 59

Query: 66 IGV 68
          +  
Sbjct: 60 LSR 62


>gi|332982896|ref|YP_004464337.1| flagellar hook-associated protein FlgK [Mahella australiensis
          50-1 BON]
 gi|332700574|gb|AEE97515.1| flagellar hook-associated protein FlgK [Mahella australiensis
          50-1 BON]
          Length = 495

 Score = 41.8 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M        I  S + +Q   + + + NIANA     TPG   Y R+ +  E ++  S
Sbjct: 1  MSSTFYGLQIGKSAINLQQQALNVTAHNIANA----GTPG---YTRQQVISEAIVPPS 51


>gi|328958295|ref|YP_004375681.1| flagellar hook-associated protein FlgK [Carnobacterium sp. 17-4]
 gi|328674619|gb|AEB30665.1| flagellar hook-associated protein FlgK [Carnobacterium sp. 17-4]
          Length = 472

 Score = 41.8 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 15/82 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
          M  L  + + A  GL VQ A +Q  S NI+NA T G       Y R+ ++          
Sbjct: 1  MSGLFGTLNNATKGLNVQQAALQTTSHNISNANTVG-------YSRQKVTMVADNPYTLG 53

Query: 54 -VMHGSGGVRVKKIGVDQSTFV 74
           +     GVR+  I      +V
Sbjct: 54 GIGQLGTGVRISSIDRIVDPYV 75


>gi|323492332|ref|ZP_08097485.1| flagellar hook-associated protein FlgK [Vibrio brasiliensis LMG
          20546]
 gi|323313379|gb|EGA66490.1| flagellar hook-associated protein FlgK [Vibrio brasiliensis LMG
          20546]
          Length = 457

 Score = 41.8 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 14/72 (19%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MHGSGGV 61
          +IA SGL      + + ++N++N  T G       Y R+      V       +    GV
Sbjct: 5  NIALSGLNANRVALDVTAQNVSNINTPG-------YSRQQAMMTSVGAGKYDKLSAGMGV 57

Query: 62 RVKKIGVDQSTF 73
           V  I      F
Sbjct: 58 EVASIRRVTDQF 69


>gi|15596278|ref|NP_249772.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa PAO1]
 gi|107100526|ref|ZP_01364444.1| hypothetical protein PaerPA_01001551 [Pseudomonas aeruginosa PACS2]
 gi|116049010|ref|YP_792188.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218892955|ref|YP_002441824.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa
           LESB58]
 gi|254234217|ref|ZP_04927540.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           C3719]
 gi|254239439|ref|ZP_04932761.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa 2192]
 gi|296390555|ref|ZP_06880030.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa PAb1]
 gi|313106036|ref|ZP_07792295.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           39016]
 gi|9946997|gb|AAG04470.1|AE004539_12 flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa PAO1]
 gi|115584231|gb|ABJ10246.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166148|gb|EAZ51659.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           C3719]
 gi|126192817|gb|EAZ56880.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa 2192]
 gi|218773183|emb|CAW28995.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           LESB58]
 gi|310878797|gb|EFQ37391.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           39016]
          Length = 249

 Score = 41.8 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 8/58 (13%)

Query: 82  PVANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD---MMTTTLDL 131
           P+A+A+     G ++  NVN + E   +   +R +  +++ ++ + D    M   L +
Sbjct: 191 PLADANVKVVSGFLESSNVNAVEEMTAILSLSRQFELHVKMMRTAEDDSAAMARVLQI 248


>gi|327398889|ref|YP_004339758.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
 gi|327181518|gb|AEA33699.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
          Length = 264

 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLRD 134
             G ++  NV ++ E   + E+ R +    + I     +    L D+ R+
Sbjct: 213 KEGYLEMSNVTIVNEMVKLIESQRNFERYQRVID---SLGNELLSDIARN 259


>gi|315452788|ref|YP_004073058.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC
           49179]
 gi|315131840|emb|CBY82468.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC
           49179]
          Length = 140

 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 30/139 (21%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            +  ++ R  +I+ NIAN  T         YR K + FE ++       V     D+   
Sbjct: 13  AMDYRALRQDLIASNIANVDT-------PFYRPKDLDFETMLAHKK-AEVFDHQKDKHLK 64

Query: 74  VEEFDPGH--P----------------VANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           + E +P H  P                +A   G     +V++ +ET++M + + +Y+A  
Sbjct: 65  LAETNPRHLEPKDFEDNKATIFFRDGHLAKNDGN----SVDIDIETSEMGKNSTMYLALT 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
             +K+   ++   +D  ++
Sbjct: 121 TALKKHRGIVNYAIDAAKN 139


>gi|261211321|ref|ZP_05925609.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC341]
 gi|260839276|gb|EEX65902.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC341]
          Length = 249

 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NVN + E   + +  R +   ++ +  + +M  ++  LLR
Sbjct: 201 TGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDSLLR 247


>gi|255262922|ref|ZP_05342264.1| flagellar hook protein FlgE [Thalassiobium sp. R2A62]
 gi|255105257|gb|EET47931.1| flagellar hook protein FlgE [Thalassiobium sp. R2A62]
          Length = 422

 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E   + +T R Y  N + I+   +M+  T ++ R
Sbjct: 385 DVAAELTQLIQTQRAYSTNAKVIQTVDEMLQETTNIKR 422



 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 14/68 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          + +S +   +GLA  ++++  IS+NIAN+ T G       Y+R    F  ++ GS     
Sbjct: 3  ISSSLNAGIAGLAANASKLATISDNIANSSTFG-------YKRAGADFHSLVTGSGNGTY 55

Query: 59 --GGVRVK 64
            GGV V 
Sbjct: 56 SAGGVSVT 63


>gi|152988763|ref|YP_001349649.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa PA7]
 gi|150963921|gb|ABR85946.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa PA7]
          Length = 249

 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 8/58 (13%)

Query: 82  PVANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD---MMTTTLDL 131
           P+A+A+     G ++  NVN + E   +   +R +  +++ ++ + D    M   L +
Sbjct: 191 PLADANVKVVSGFLESSNVNAVEEMTAILSLSRQFELHVKMMRTAEDDSAAMARVLQI 248


>gi|229160717|ref|ZP_04288709.1| Flagellar hook protein flgE [Bacillus cereus R309803]
 gi|228622732|gb|EEK79566.1| Flagellar hook protein flgE [Bacillus cereus R309803]
          Length = 407

 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 17/90 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + SG+      + + S NIANA+T G       Y+++   F+++++ +    V
Sbjct: 1  MIKALYTSISGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNS---V 50

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G +       +   +P +  +G VK  
Sbjct: 51 GAKGDE------RYAGTNPKSIGNG-VKMS 73



 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 368 NVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|149188067|ref|ZP_01866362.1| flagellar basal body rod protein FlgF [Vibrio shilonii AK1]
 gi|148838055|gb|EDL54997.1| flagellar basal body rod protein FlgF [Vibrio shilonii AK1]
          Length = 249

 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NVN + E   + +  R +   ++ +  + DM   +  LLR
Sbjct: 201 TGAIEGSNVNAVGEMTSLIDLQRQFEMQVKLMSTAEDMDKASDSLLR 247


>gi|117928040|ref|YP_872591.1| flagellar hook-associated protein FlgK [Acidothermus
          cellulolyticus 11B]
 gi|117648503|gb|ABK52605.1| flagellar hook-associated protein FlgK [Acidothermus
          cellulolyticus 11B]
          Length = 463

 Score = 41.8 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 15/75 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------- 52
          M     S   A + L  +   +++  +NIANA T+G       Y R+   F+        
Sbjct: 1  MGTEFGSLSTALTALQAERKALEVTGQNIANASTSG-------YTRQRAVFQGIGGSVVP 53

Query: 53 EVMHGSGGVRVKKIG 67
           +   S GV    + 
Sbjct: 54 AMYSRSDGVGAGVVV 68


>gi|225871934|ref|YP_002753388.1| flagellar hook protein flgE [Acidobacterium capsulatum ATCC
          51196]
 gi|225793054|gb|ACO33144.1| flagellar hook protein flgE [Acidobacterium capsulatum ATCC
          51196]
          Length = 409

 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++S  I  +GL   S  +  I+ N++N  TT        ++ +  SF ++ +   G
Sbjct: 1  MSSFSIPLTGLEASSTSLDTIANNLSNMNTTA-------FKSQQASFGDLFYQQIG 49



 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 20/42 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN+  E +++      Y A+ + +     +   T++++
Sbjct: 367 EGSNVNISTEFSNLVVAQNAYEASSKALTTFDQVAQDTINII 408


>gi|311992323|gb|ADQ26735.1| proximal rod protein [Aeromonas hydrophila]
          Length = 131

 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 53/133 (39%), Gaps = 20/133 (15%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I    L+V+S R +++S NIANA T G       ++ + I+F + +  +   +   
Sbjct: 6   KAFGIHQYTLSVRSKRAEVLSSNIANADTPG-------FKARDINFSQALEEAQQQQGFG 58

Query: 66  IGVD---------QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           +             +  V ++   +P+   +G      V+V  E ++    +  Y  +L+
Sbjct: 59  LATTSEKHFALQMDAPGVTQY--RNPLQPDTG--DGNTVDVQQERSEFLRNSLEYQTSLE 114

Query: 117 TIKQSHDMMTTTL 129
            +      +   L
Sbjct: 115 FMNSKISGLLKAL 127


>gi|311070047|ref|YP_003974970.1| flagellar hook-associated protein FlgK [Bacillus atrophaeus 1942]
 gi|310870564|gb|ADP34039.1| flagellar hook-associated protein FlgK [Bacillus atrophaeus 1942]
          Length = 507

 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M         A   L+ Q A +   + N+ANA T G       Y R+ +S E  
Sbjct: 1  MSSTFMGLETARRALSAQQAALSTTANNVANANTDG-------YTRQRVSLEAT 47


>gi|255099395|ref|ZP_05328372.1| putative flagellar hook-associated protein [Clostridium difficile
          QCD-63q42]
 gi|255305252|ref|ZP_05349424.1| putative flagellar hook-associated protein [Clostridium difficile
          ATCC 43255]
          Length = 436

 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M  L +  + ANSG+      +Q IS NI+N  T G       Y R+   F  
Sbjct: 1  MAGLFSILNTANSGMNAHQKAIQTISHNISNLDTDG-------YSRQRTEFAT 46



 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 16/33 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             V++  E  ++ +  R Y A+ + +  +  ++
Sbjct: 396 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLL 428


>gi|154175384|ref|YP_001408368.1| flagellar hook-associated protein FlgK [Campylobacter curvus
          525.92]
 gi|112802604|gb|EAT99948.1| flagellar hook-associated protein FlgK [Campylobacter curvus
          525.92]
          Length = 623

 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 7/50 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          M  +  S +   SGL     ++     NIANA +         Y R+ + 
Sbjct: 1  MANIFMSLNTGVSGLNAAQTQISTTGNNIANADSA-------YYTRQRVV 43


>gi|49089306|gb|AAT51668.1| PA1081 [synthetic construct]
          Length = 250

 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 8/58 (13%)

Query: 82  PVANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD---MMTTTLDL 131
           P+A+A+     G ++  NVN + E   +   +R +  +++ ++ + D    M   L +
Sbjct: 191 PLADANVKVVSGFLESSNVNAVEEMTAILSLSRQFELHVKMMRTAEDDSAAMARVLQI 248


>gi|254446126|ref|ZP_05059602.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
 gi|198260434|gb|EDY84742.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
          Length = 250

 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G ++  NV+   E  ++   +R +  N + I+Q  D++   +  L
Sbjct: 203 GSLEQSNVSATTEMINLINVSRSFQINQRVIQQHDDVLGKAIQTL 247


>gi|134300226|ref|YP_001113722.1| hypothetical protein Dred_2387 [Desulfotomaculum reducens MI-1]
 gi|134052926|gb|ABO50897.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum reducens MI-1]
          Length = 257

 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NV+ + E  ++    R+Y ++ + I+   +++   +  + R
Sbjct: 208 QGWLEKSNVDPVQEMINIIPVARIYESSQKLIQIQDELLDKAINQVGR 255


>gi|237810461|ref|YP_002894912.1| flagellar hook protein FlgE [Burkholderia pseudomallei MSHR346]
 gi|237503327|gb|ACQ95645.1| flagellar hook protein FlgE [Burkholderia pseudomallei MSHR346]
          Length = 413

 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +   +    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGL   S+ + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLVGASSDLDVIGNNIANANTVG-------FKGSTAQFSDMYANSVASAVNNPIGIGTM 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G         +   N +G  +  N
Sbjct: 61 LASVQQQFSQGTITSSTSSLNVAINGNGFFQMSN 94


>gi|160903120|ref|YP_001568701.1| flagellar basal-body rod protein FlgB [Petrotoga mobilis SJ95]
 gi|160360764|gb|ABX32378.1| flagellar basal-body rod protein FlgB [Petrotoga mobilis SJ95]
          Length = 133

 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 7/44 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +   S R  +IS+NIAN  T G       Y+RK + FE  +  +
Sbjct: 14 MDALSLRQNVISQNIANYETPG-------YKRKYVDFENELQKA 50


>gi|170722890|ref|YP_001750578.1| flagellar basal body rod protein FlgF [Pseudomonas putida W619]
 gi|169760893|gb|ACA74209.1| flagellar basal-body rod protein FlgF [Pseudomonas putida W619]
          Length = 248

 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH---DMMTTTLDLL 132
           SG ++  NVN + E   +   +R +  +++ +  +    + M   L L 
Sbjct: 200 SGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNAAKEGDEAMARVLQLG 248


>gi|325274800|ref|ZP_08140828.1| flagellar hook protein FlgE [Pseudomonas sp. TJI-51]
 gi|324100068|gb|EGB97886.1| flagellar hook protein FlgE [Pseudomonas sp. TJI-51]
          Length = 440

 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  ++ +    Y AN +TI     +M T + +
Sbjct: 401 SNVDLTGELVNLIKAQSNYQANAKTISTESTIMQTIIQM 439



 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 12/83 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-----SGGV 61
          S +I  SGL   +  + +   NIAN  TTG       ++     F +         S G 
Sbjct: 2  SFNIGLSGLYAANKALNVTGNNIANVATTG-------FKSSRAEFADQYSNSIRGTSAGK 54

Query: 62 RVKKIGVDQSTFVEEFDPGHPVA 84
           V   GV  +   + F PG+  A
Sbjct: 55 SVIGTGVKTAAVSQLFTPGNINA 77


>gi|228984838|ref|ZP_04145009.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          tochigiensis BGSC 4Y1]
 gi|229155324|ref|ZP_04283435.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 4342]
 gi|228628249|gb|EEK84965.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 4342]
 gi|228774890|gb|EEM23285.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          tochigiensis BGSC 4Y1]
          Length = 437

 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|78221651|ref|YP_383398.1| hypothetical protein Gmet_0430 [Geobacter metallireducens GS-15]
 gi|78192906|gb|ABB30673.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
          Length = 242

 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 10/65 (15%)

Query: 79  PGHPVANAS---------GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           P  P A  +         G ++  NVN + E   + ETNR +    + +K   D+     
Sbjct: 177 PADPQATPNPVTGEKVMQGAIEESNVNTVQEMVQLIETNRYFEMCSKVVKAYDDLTGKAA 236

Query: 130 -DLLR 133
            ++ +
Sbjct: 237 NEIGK 241



 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 15/76 (19%)

Query: 13 SGLA---VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
          S L        R+ ++S N+AN  T G       +++  ++FE ++   G       G D
Sbjct: 7  SALTGNVAAMKRLDVLSNNLANVNTPG-------FKKDRMTFESMLQTVGAQPRPGGGTD 59

Query: 70 -----QSTFVEEFDPG 80
               ++TF  ++ PG
Sbjct: 60 APVFAETTFFTDYSPG 75


>gi|323137001|ref|ZP_08072081.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242]
 gi|322397762|gb|EFY00284.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242]
          Length = 417

 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 7/60 (11%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M       + +  G++ QS  +  ISENIAN+ T G       Y+R T  F  V+ G  G
Sbjct: 1  MSSTFGLFNTSIMGMSAQSDALANISENIANSGTVG-------YKRATTHFLTVLSGFQG 53



 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV++  E + M    R Y AN Q+ + + +++ 
Sbjct: 376 EASNVDLATELSTMIIAQRSYTANTQSFQVASEILQ 411


>gi|229189850|ref|ZP_04316861.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 10876]
 gi|228593658|gb|EEK51466.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 10876]
          Length = 437

 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++  E  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSAEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|291277449|ref|YP_003517221.1| putative flagellar basal-body rod protein [Helicobacter mustelae
           12198]
 gi|290964643|emb|CBG40497.1| putative flagellar basal-body rod protein [Helicobacter mustelae
           12198]
          Length = 146

 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 30/134 (22%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFE--------EVMHGSGGVRVKKIGVDQ 70
           S R  +I+ NIAN  T         YR K I FE         +      + ++     +
Sbjct: 24  SMRQDLIASNIANVDT-------PFYRPKDIDFEHYLAQEKARIFDNKPHLELEMAQTSK 76

Query: 71  STFV----EEFDP------GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +       + + P      GH +A   G     +V++ VET++M + + +Y A    +K+
Sbjct: 77  NHLKGGDTQSYRPTTFFRDGH-LARNDGN----SVDLDVETSEMGKNSIMYQALTTALKK 131

Query: 121 SHDMMTTTLDLLRD 134
              + T  +D  R+
Sbjct: 132 HRGIFTYAIDSGRN 145


>gi|50954410|ref|YP_061698.1| flagellar hook protein [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50950892|gb|AAT88593.1| flagellar hook protein [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 390

 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S      GL  Q   + + + NIAN  T G       ++  ++ FE+ +
Sbjct: 1  MLRSLDSGVFGLQAQQTMLDVTANNIANVNTAG-------FKASSVQFEDAL 45



 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G  +  NV++  E  ++  + R + A+ + I  S +++     L
Sbjct: 344 GAYEGSNVDLGREFTNLIVSQRAFQASARVITTSDEILQELTQL 387


>gi|315125985|ref|YP_004067988.1| FlgFL [Pseudoalteromonas sp. SM9913]
 gi|315014499|gb|ADT67837.1| FlgFL [Pseudoalteromonas sp. SM9913]
          Length = 243

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           +G ++  NVN + E       +R +  N++ +K + ++ T+
Sbjct: 194 TGALEGSNVNAVAEMIKTMNISRQFEMNVKMMKSADELATS 234


>gi|85710161|ref|ZP_01041226.1| flagellar proximal rod protein [Erythrobacter sp. NAP1]
 gi|85688871|gb|EAQ28875.1| flagellar proximal rod protein [Erythrobacter sp. NAP1]
          Length = 117

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 7/52 (13%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
              I  + L ++S RM +I+ NIANA     TPG   ++ + + F   ++ 
Sbjct: 4  TIFGIHGAALELRSQRMGVIASNIANA----ATPG---FKARDMDFNAALNA 48


>gi|227820852|ref|YP_002824822.1| flagellar basal body rod protein FlgF [Sinorhizobium fredii
          NGR234]
 gi|227339851|gb|ACP24069.1| Flagellar basal-body rod protein FlgF [Sinorhizobium fredii
          NGR234]
          Length = 241

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 10/58 (17%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           L+ Q     R+  +++NIANA T G       +R   + F++V+  +   +V  +  
Sbjct: 8  ALSSQMALEKRLNTLADNIANANTVG-------FRSTEVKFDQVLGDTKPSKVSYVSE 58



 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 18/78 (23%)

Query: 58  SGGVRVKKIGVDQSTFVE---EFDPGH--PVANAS------------GIVKYPNVNVLVE 100
             GV+V  +G+ ++ F      +D     P A               G ++  NVN + E
Sbjct: 146 QNGVQVALLGLYEADFSSGFVRYDNSAVMPAAQPEPVVDRFDVGVMQGFLEESNVNAVQE 205

Query: 101 TADMRETNRLYMANLQTI 118
              +    R +  N+  +
Sbjct: 206 MTQLIMVTRAFD-NVTAL 222


>gi|190574262|ref|YP_001972107.1| flagellar basal body rod protein FlgF [Stenotrophomonas maltophilia
           K279a]
 gi|190012184|emb|CAQ45807.1| putative flagellar basal-body rod protein [Stenotrophomonas
           maltophilia K279a]
          Length = 249

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 78  DPGHPVANASG------IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           DP  P A A G       ++  NV+       M +  R Y   +Q IK   +   +   +
Sbjct: 185 DPRQPFAPAQGTAVHSGQLEGSNVDAAGALVQMIQLQRQYEMQVQVIKHGDENARSANSM 244

Query: 132 LR 133
           LR
Sbjct: 245 LR 246


>gi|118477189|ref|YP_894340.1| flagellar hook protein FlgE [Bacillus thuringiensis str. Al
          Hakam]
 gi|225863612|ref|YP_002748990.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB102]
 gi|229183945|ref|ZP_04311161.1| Flagellar hook protein FlgE [Bacillus cereus BGSC 6E1]
 gi|118416414|gb|ABK84833.1| flagellar hook protein [Bacillus thuringiensis str. Al Hakam]
 gi|225790448|gb|ACO30665.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB102]
 gi|228599597|gb|EEK57201.1| Flagellar hook protein FlgE [Bacillus cereus BGSC 6E1]
          Length = 437

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|89072308|ref|ZP_01158887.1| putative flagellar hook-associated protein [Photobacterium sp.
           SKA34]
 gi|89051840|gb|EAR57292.1| putative flagellar hook-associated protein [Photobacterium sp.
           SKA34]
          Length = 286

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 5/80 (6%)

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
             M G   +  ++  VDQ      F   +   +         VN   E A++      Y 
Sbjct: 212 ASMVGKTAIETRQAAVDQKAAETLFSQANAARDN-----LSAVNSDEEAANLMTFTNAYQ 266

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++ I  ++++  + L LL
Sbjct: 267 ANMKVISTANELFDSVLRLL 286


>gi|332140543|ref|YP_004426281.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii str.
          'Deep ecotype']
 gi|327550565|gb|AEA97283.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii str.
          'Deep ecotype']
          Length = 144

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          S L +++ RM++IS N+ANA T G       Y+ + I F + M  +
Sbjct: 14 SALKIRTERMEVISGNLANANTPG-------YKARDIDFNKAMQSA 52


>gi|53717914|ref|YP_106900.1| flagellar hook protein FlgE [Burkholderia pseudomallei K96243]
 gi|53724565|ref|YP_104798.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 23344]
 gi|67641538|ref|ZP_00440315.1| flagellar hook protein FlgE [Burkholderia mallei GB8 horse 4]
 gi|76810959|ref|YP_331879.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1710b]
 gi|121599135|ref|YP_994291.1| flagellar hook protein FlgE [Burkholderia mallei SAVP1]
 gi|124384593|ref|YP_001028060.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10229]
 gi|126449658|ref|YP_001082867.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10247]
 gi|126453793|ref|YP_001064564.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1106a]
 gi|167001537|ref|ZP_02267332.1| flagellar hook protein FlgE [Burkholderia mallei PRL-20]
 gi|167717660|ref|ZP_02400896.1| flagellar hook protein FlgE [Burkholderia pseudomallei DM98]
 gi|167736703|ref|ZP_02409477.1| flagellar hook protein FlgE [Burkholderia pseudomallei 14]
 gi|167813802|ref|ZP_02445482.1| flagellar hook protein FlgE [Burkholderia pseudomallei 91]
 gi|167822318|ref|ZP_02453789.1| flagellar hook protein FlgE [Burkholderia pseudomallei 9]
 gi|167843908|ref|ZP_02469416.1| flagellar hook protein FlgE [Burkholderia pseudomallei B7210]
 gi|167892410|ref|ZP_02479812.1| flagellar hook protein FlgE [Burkholderia pseudomallei 7894]
 gi|167900908|ref|ZP_02488113.1| flagellar hook protein FlgE [Burkholderia pseudomallei NCTC 13177]
 gi|167909127|ref|ZP_02496218.1| flagellar hook protein FlgE [Burkholderia pseudomallei 112]
 gi|167917164|ref|ZP_02504255.1| flagellar hook protein FlgE [Burkholderia pseudomallei BCC215]
 gi|217424944|ref|ZP_03456440.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 576]
 gi|226199793|ref|ZP_03795344.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
           Pakistan 9]
 gi|242315744|ref|ZP_04814760.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1106b]
 gi|254182140|ref|ZP_04888737.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1655]
 gi|254188070|ref|ZP_04894582.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196353|ref|ZP_04902777.1| flagellar basal body protein FlaE [Burkholderia pseudomallei S13]
 gi|254201896|ref|ZP_04908260.1| flagellar hook protein FlgE [Burkholderia mallei FMH]
 gi|254207230|ref|ZP_04913581.1| flagellar hook protein FlgE [Burkholderia mallei JHU]
 gi|254259636|ref|ZP_04950690.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1710a]
 gi|254295814|ref|ZP_04963271.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 406e]
 gi|254359732|ref|ZP_04976003.1| flagellar hook protein FlgE [Burkholderia mallei 2002721280]
 gi|52208328|emb|CAH34261.1| putative flagellar hook protein [Burkholderia pseudomallei K96243]
 gi|52427988|gb|AAU48581.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 23344]
 gi|76580412|gb|ABA49887.1| Flagella basal body rod protein [Burkholderia pseudomallei 1710b]
 gi|121227945|gb|ABM50463.1| flagellar hook protein FlgE [Burkholderia mallei SAVP1]
 gi|124292613|gb|ABN01882.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10229]
 gi|126227435|gb|ABN90975.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1106a]
 gi|126242528|gb|ABO05621.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10247]
 gi|147747790|gb|EDK54866.1| flagellar hook protein FlgE [Burkholderia mallei FMH]
 gi|147752772|gb|EDK59838.1| flagellar hook protein FlgE [Burkholderia mallei JHU]
 gi|148028946|gb|EDK86878.1| flagellar hook protein FlgE [Burkholderia mallei 2002721280]
 gi|157805870|gb|EDO83040.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 406e]
 gi|157935750|gb|EDO91420.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169653096|gb|EDS85789.1| flagellar basal body protein FlaE [Burkholderia pseudomallei S13]
 gi|184212678|gb|EDU09721.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1655]
 gi|217391964|gb|EEC31990.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 576]
 gi|225928144|gb|EEH24180.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
           Pakistan 9]
 gi|238522489|gb|EEP85933.1| flagellar hook protein FlgE [Burkholderia mallei GB8 horse 4]
 gi|242138983|gb|EES25385.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1106b]
 gi|243062738|gb|EES44924.1| flagellar hook protein FlgE [Burkholderia mallei PRL-20]
 gi|254218325|gb|EET07709.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1710a]
          Length = 413

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +   +    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S+ + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASSDLDVIGNNIANANTVG-------FKGSTAQFSDMYANSVASAVNNPIGIGTM 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G         +   N +G  +  N
Sbjct: 61 LASVQQQFSQGTITSSTSSLNVAINGNGFFQMSN 94


>gi|229160707|ref|ZP_04288699.1| Flagellar basal-body rod protein [Bacillus cereus R309803]
 gi|228622722|gb|EEK79556.1| Flagellar basal-body rod protein [Bacillus cereus R309803]
          Length = 154

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 31/125 (24%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG-- 80
             +S NIANA T G       Y+ + ++F E M+ S  +  K    D ++  + +     
Sbjct: 39  NTVSSNIANANTPG-------YQAQDVTFAEQMNKSSALY-KSNSSDLNSNPDLYQTNEM 90

Query: 81  --------HPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                   +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + 
Sbjct: 91  HLPTVNMKNTYAKIQTKSMQMNKDGN----SVDVSTEMLDLMKANQLYGISINAINTQYA 146

Query: 124 MMTTT 128
           +    
Sbjct: 147 INQAA 151


>gi|170751912|ref|YP_001758172.1| flagellar hook-associated protein FlgK [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658434|gb|ACB27489.1| flagellar hook-associated protein FlgK [Methylobacterium
           radiotolerans JCM 2831]
          Length = 627

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E +++      Y AN + +  + DM+T  L +
Sbjct: 591 VNIDQEMSNLIALQTAYGANARVLTAARDMLTQLLQI 627


>gi|218528725|ref|YP_002419541.1| flagellar basal body rod protein [Methylobacterium chloromethanicum
           CM4]
 gi|218521028|gb|ACK81613.1| flagellar basal body rod protein [Methylobacterium chloromethanicum
           CM4]
          Length = 242

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 6/60 (10%)

Query: 79  PGHPVAN------ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           PG PV +        G V+  NVN ++E   +    R + +      ++   +T  +  L
Sbjct: 179 PGRPVQDFTRIGLVQGYVEGANVNPIMEMTRLIAIQRAFESAATMTSEADTTLTGAVKTL 238



 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +S ++A S       R+   + N+AN  T G       +R + +SF E++  S    V
Sbjct: 1  MQSSLYVALSSQIALEKRLTTTANNVANMATVG-------FRAEEVSFSELLARSNRGEV 53

Query: 64 KKIGVDQSTFVEEFDPG 80
            +G  ++T      P 
Sbjct: 54 AFVGPGKTTISRAAGPT 70


>gi|120613060|ref|YP_972738.1| Fis family transcriptional regulator [Acidovorax citrulli AAC00-1]
 gi|120591524|gb|ABM34964.1| transcriptional regulator, Fis family [Acidovorax citrulli AAC00-1]
          Length = 246

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 79  PGHPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           P  P A   SG ++  NVN +     M   +R + A ++ ++ +     T   LL
Sbjct: 188 PNDPNARLLSGALEGSNVNAVESMVGMIAASRQFEAQMRLLQTAETNDKTAAQLL 242


>gi|90422607|ref|YP_530977.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
           BisB18]
 gi|90104621|gb|ABD86658.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisB18]
          Length = 125

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 15/126 (11%)

Query: 8   AHIANSGLAVQ--SARMQIISENIANARTTGDTPGSDPYRRKTI-SFEEVMHGSGGVRVK 64
             +A+S    Q  S R   IS N+ANA T G       Y+ K I SF +++ G   + V 
Sbjct: 7   FDVASS--QAQWLSLRQATISSNVANANTPG-------YQAKDIESFSKLLDGKL-IPVA 56

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQSH 122
                        +PG      S  + +    V++  E     + NR Y  N   +K   
Sbjct: 57  VTSPMHIASGTAANPGETREKDSWDIVHSGNSVSLEQEMLKAGDVNRDYSLNTAIVKSFQ 116

Query: 123 DMMTTT 128
            M  ++
Sbjct: 117 RMFMSS 122


>gi|134280876|ref|ZP_01767586.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           305]
 gi|125657219|gb|ABN48707.1| flagellar basal body rod protein [Burkholderia pseudomallei]
 gi|134247898|gb|EBA47982.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           305]
          Length = 241

 Score = 41.8 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR +   ++    + +M      L+R
Sbjct: 195 GHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADAGNRLIR 240


>gi|26991077|ref|NP_746502.1| flagellar hook protein FlgE [Pseudomonas putida KT2440]
 gi|24986112|gb|AAN69966.1|AE016635_2 flagellar hook protein FlgE [Pseudomonas putida KT2440]
          Length = 440

 Score = 41.8 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  ++ +    Y AN +TI     +M T + +
Sbjct: 401 SNVDLTGELVNLIKAQSNYQANAKTISTESTIMQTIIQM 439



 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 12/83 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-----SGGV 61
          S +I  SGL   +  + +   NIAN  TTG       ++     F +         S G 
Sbjct: 2  SFNIGLSGLYAANKALNVTGNNIANVATTG-------FKSSRAEFADQYSNSIRGTSAGK 54

Query: 62 RVKKIGVDQSTFVEEFDPGHPVA 84
           V   GV  +   + F PG+  A
Sbjct: 55 TVIGTGVKTAAVSQLFTPGNINA 77


>gi|148546708|ref|YP_001266810.1| flagellar basal body rod protein FlgF [Pseudomonas putida F1]
 gi|148510766|gb|ABQ77626.1| flagellar basal-body rod protein FlgF [Pseudomonas putida F1]
          Length = 246

 Score = 41.8 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH---DMMTTTLDLL 132
           SG ++  NVN + E   +   +R +  +++ +  +    + M   L L 
Sbjct: 198 SGFLQGSNVNAVEEMTSVLALSRQFELHVKMMNAAKEGDEAMARVLQLG 246


>gi|126441055|ref|YP_001057322.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668]
 gi|126220548|gb|ABN84054.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 668]
          Length = 413

 Score = 41.8 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +   +    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S+ + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASSDLDVIGNNIANANTVG-------FKGSTAQFSDMYANSVASAVNNPIGIGTM 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G         +   N +G  +  N
Sbjct: 61 LASVQQQFSQGTITSSTSSLNVAINGNGFFQMSN 94


>gi|254470342|ref|ZP_05083746.1| flagellar basal-body rod protein [Pseudovibrio sp. JE062]
 gi|211960653|gb|EEA95849.1| flagellar basal-body rod protein [Pseudovibrio sp. JE062]
          Length = 246

 Score = 41.8 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 10/49 (20%)

Query: 14 GLAVQS-AR--MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          GL+ QS  R  + +++ N+AN  TTG       Y+ + + FEE +  + 
Sbjct: 8  GLSRQSALRRNLDVVANNLANINTTG-------YKAQRLIFEEYLMPTA 49


>gi|167905091|ref|ZP_02492296.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           NCTC 13177]
          Length = 241

 Score = 41.8 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR +   ++    + +M      L+R
Sbjct: 195 GHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADAGNRLIR 240


>gi|167568107|ref|ZP_02361023.1| flagellar hook protein FlgE [Burkholderia oklahomensis EO147]
 gi|167574225|ref|ZP_02367099.1| flagellar hook protein FlgE [Burkholderia oklahomensis C6786]
          Length = 413

 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +   +    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 34.5 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S+ + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASSDLDVIGNNIANANTVG-------FKGSTAQFADMYANSVASAVNNPIGIGTM 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G         +   N +G  +  N
Sbjct: 61 LASVQQQFSQGTITSSTSSLNVAINGNGFFQMSN 94


>gi|166711640|ref|ZP_02242847.1| hypothetical protein Xoryp_09325 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 98

 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 31/128 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+ V + R Q+ + N+A     G        +R++++     +G     V 
Sbjct: 1   MSISSIASSGMQVAALRQQVAASNVARQPVDGS-------QRQSVAASTQANGGVAANVV 53

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D S                            +  +       + AN   +++S +M
Sbjct: 54  NVSADPSA------------------------PATDLVEGVSARNDFQANANVLRRSDEM 89

Query: 125 MTTTLDLL 132
           + + LD+L
Sbjct: 90  LGSLLDVL 97


>gi|160897165|ref|YP_001562747.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
 gi|160362749|gb|ABX34362.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
          Length = 129

 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 12/70 (17%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ--- 70
           L +++ R+ II+ NIANA T G       Y+ K + F+E +  S    +      +   
Sbjct: 10 ALKIRTQRLAIIASNIANADTPG-------YQAKDLDFKEALERSNATMLSVSSTSKGHI 62

Query: 71 --STFVEEFD 78
            S     +D
Sbjct: 63 PSSEMKSIYD 72


>gi|163794151|ref|ZP_02188124.1| hypothetical protein BAL199_02019 [alpha proteobacterium BAL199]
 gi|159180765|gb|EDP65284.1| hypothetical protein BAL199_02019 [alpha proteobacterium BAL199]
          Length = 240

 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 5/53 (9%)

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
           VR      DQ       +P        G+++  NVN + E   M + +R Y A
Sbjct: 169 VRDSLFETDQVP-----EPAQESEVMQGMIETSNVNAITEMTSMIDVHRAYEA 216


>gi|254175270|ref|ZP_04881931.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 10399]
 gi|160696315|gb|EDP86285.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 10399]
          Length = 413

 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +   +    R Y AN QTIK    +  T ++L
Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLINL 413



 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---KIGVD 69
          SGLA  S+ + +I  NIANA T G       ++  T  F ++   S    V     IG  
Sbjct: 8  SGLAGASSDLDVIGNNIANANTVG-------FKGSTAQFSDMYANSVASAVNNPIGIGTM 60

Query: 70 QSTFVEEFDPG---------HPVANASGIVKYPN 94
           ++  ++F  G         +   N +G  +  N
Sbjct: 61 LASVQQQFSQGTITSSTSSLNVAINGNGFFQMSN 94


>gi|321313088|ref|YP_004205375.1| flagellar hook-associated protein FlgK [Bacillus subtilis BSn5]
 gi|320019362|gb|ADV94348.1| flagellar hook-associated protein FlgK [Bacillus subtilis BSn5]
          Length = 507

 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          M         A   L+ Q A +   + N+ANA T G       Y R+ +S E   +
Sbjct: 1  MTSTFMGLETARRALSAQQAALSTTANNVANANTDG-------YTRQRVSLEATDY 49


>gi|296330251|ref|ZP_06872732.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
          spizizenii ATCC 6633]
 gi|305676144|ref|YP_003867816.1| flagellar hook-filament junction [Bacillus subtilis subsp.
          spizizenii str. W23]
 gi|296152519|gb|EFG93387.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
          spizizenii ATCC 6633]
 gi|305414388|gb|ADM39507.1| flagellar hook-filament junction [Bacillus subtilis subsp.
          spizizenii str. W23]
          Length = 507

 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          M         A   L+ Q A +   + N+ANA T G       Y R+ +S E   +
Sbjct: 1  MTSTFMGLETARRALSAQQAALSTTANNVANANTDG-------YTRQRVSLEATDY 49


>gi|291486094|dbj|BAI87169.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
          natto BEST195]
          Length = 507

 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          M         A   L+ Q A +   + N+ANA T G       Y R+ +S E   +
Sbjct: 1  MTSTFMGLETARRALSAQQAALSTTANNVANANTDG-------YTRQRVSLEATDY 49


>gi|163850121|ref|YP_001638164.1| flagellar basal body rod protein [Methylobacterium extorquens PA1]
 gi|240137255|ref|YP_002961724.1| Flagellar basal-body rod protein flgF [Methylobacterium extorquens
           AM1]
 gi|254559266|ref|YP_003066361.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens
           DM4]
 gi|163661726|gb|ABY29093.1| flagellar basal body rod protein [Methylobacterium extorquens PA1]
 gi|240007221|gb|ACS38447.1| Flagellar basal-body rod protein flgF [Methylobacterium extorquens
           AM1]
 gi|254266544|emb|CAX22308.1| Flagellar basal-body rod protein flgF [Methylobacterium extorquens
           DM4]
          Length = 242

 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 6/60 (10%)

Query: 79  PGHPVAN------ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           PG PV +        G V+  NVN ++E   +    R + +      ++   +T  +  L
Sbjct: 179 PGRPVQDFTRIGLVQGYVEGANVNPIMEMTRLIAIQRAFESAATMTSEADTTLTGAVKTL 238



 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +S ++A S       R+   + N+AN  T G       +R + +SF E++  S    V
Sbjct: 1  MQSSLYVALSSQIALEKRLTTTANNVANMATVG-------FRAEEVSFSELLARSNRGEV 53

Query: 64 KKIGVDQSTFVEEFDPG 80
            +G  ++T      P 
Sbjct: 54 AFVGPGKTTISRAAGPT 70


>gi|313497761|gb|ADR59127.1| FlgE [Pseudomonas putida BIRD-1]
          Length = 440

 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  ++ +    Y AN +TI     +M T + +
Sbjct: 401 SNVDLTGELVNLIKAQSNYQANAKTISTESTIMQTIIQM 439



 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 12/83 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-----SGGV 61
          S +I  SGL   +  + +   NIAN  TTG       ++     F +         S G 
Sbjct: 2  SFNIGLSGLYAANKALNVTGNNIANVATTG-------FKSSRAEFADQYSNSIRGTSAGK 54

Query: 62 RVKKIGVDQSTFVEEFDPGHPVA 84
           V   GV  +   + F PG+  A
Sbjct: 55 TVIGTGVKTAAVSQLFTPGNINA 77


>gi|149191154|ref|ZP_01869412.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
 gi|148834992|gb|EDL51971.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
          Length = 244

 Score = 41.8 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV+ L E   +    R Y   ++ +  + ++      LL+
Sbjct: 197 SGYLEASNVSSLEELVSIMSLTRQYEMQIEVMASADEIAQIGNKLLK 243


>gi|253996318|ref|YP_003048382.1| flagellar basal-body rod protein FlgF [Methylotenera mobilis JLW8]
 gi|253982997|gb|ACT47855.1| flagellar basal-body rod protein FlgF [Methylotenera mobilis JLW8]
          Length = 246

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 78  DPGHPVANA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +P    AN     G ++  NVNV+     M   +R +   ++ I+ + +       LL+
Sbjct: 186 NPATADANVSVVQGALESSNVNVVDAMVTMISLSRQFETQMKLIQTAENNANKASQLLQ 244


>gi|228952133|ref|ZP_04114228.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
 gi|228807665|gb|EEM54189.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
          Length = 437

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++  E  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSAEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|118474252|ref|YP_891218.1| flagellar hook protein [Campylobacter fetus subsp. fetus 82-40]
 gi|118413478|gb|ABK81898.1| flagellar hook protein [Campylobacter fetus subsp. fetus 82-40]
          Length = 546

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 11/60 (18%)

Query: 83  VANASGIV-----------KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             + +G V           +  NV++ V   D+    + Y A+ ++I  S  M+   +++
Sbjct: 485 YQDQNGNVVYGAAIKNSTLEMSNVDLGVSLTDLIIMQKAYDASAKSITTSDQMIQKAINM 544


>gi|16080594|ref|NP_391421.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
          subtilis str. 168]
 gi|221311492|ref|ZP_03593339.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
          subtilis str. 168]
 gi|221315819|ref|ZP_03597624.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
          subtilis str. NCIB 3610]
 gi|221320734|ref|ZP_03602028.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
          subtilis str. JH642]
 gi|221325019|ref|ZP_03606313.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
          subtilis str. SMY]
 gi|2828498|sp|P39810|FLGK_BACSU RecName: Full=Flagellar hook-associated protein 1; Short=HAP1
 gi|1762338|gb|AAC44946.1| flagellar-hook associated protein 1 (HAP1) [Bacillus subtilis
          subsp. subtilis str. 168]
 gi|2636067|emb|CAB15558.1| flagellar hook-filament junction [Bacillus subtilis subsp.
          subtilis str. 168]
          Length = 507

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          M         A   L+ Q A +   + N+ANA T G       Y R+ +S E   +
Sbjct: 1  MTSTFMGLETARRALSAQQAALSTTANNVANANTDG-------YTRQRVSLEATDY 49


>gi|118581835|ref|YP_903085.1| hypothetical protein Ppro_3435 [Pelobacter propionicus DSM 2379]
 gi|118504545|gb|ABL01028.1| protein of unknown function DUF1078 domain protein [Pelobacter
           propionicus DSM 2379]
          Length = 259

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  +   + +T + Y AN +TI  + +M    L+L+R
Sbjct: 217 EASNVDMASQFVRLIQTQQAYTANSKTITTADEMTDVVLNLIR 259


>gi|302670727|ref|YP_003830687.1| flagellar hook protein FlgE1 [Butyrivibrio proteoclasticus B316]
 gi|302395200|gb|ADL34105.1| flagellar hook protein FlgE1 [Butyrivibrio proteoclasticus B316]
          Length = 1049

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87   SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G+++  NV++  +  +M  T R + AN + I  S  ++    +L R
Sbjct: 1003 TGVLEMSNVDLSSQFTEMITTQRGFQANSRIITVSDTLLEELTNLKR 1049



 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 18/65 (27%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-----------GGVR 62
          GL     +M +I  NIAN  TT        ++ ++I+F ++M+ +           GGV 
Sbjct: 11 GLKTHQTKMDVIGNNIANVNTTS-------FKSQSITFSDLMYQTTQTASGATETKGGVN 63

Query: 63 VKKIG 67
           ++IG
Sbjct: 64 ARQIG 68


>gi|30261751|ref|NP_844128.1| flagellar hook protein FlgE [Bacillus anthracis str. Ames]
 gi|47526975|ref|YP_018324.1| flagellar hook protein FlgE [Bacillus anthracis str. 'Ames
          Ancestor']
 gi|49184583|ref|YP_027835.1| flagellar hook protein FlgE [Bacillus anthracis str. Sterne]
 gi|65319023|ref|ZP_00391982.1| COG1749: Flagellar hook protein FlgE [Bacillus anthracis str.
          A2012]
 gi|165869249|ref|ZP_02213908.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0488]
 gi|167633465|ref|ZP_02391790.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0442]
 gi|167639152|ref|ZP_02397425.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0193]
 gi|170686150|ref|ZP_02877372.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0465]
 gi|170706520|ref|ZP_02896980.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0389]
 gi|177650602|ref|ZP_02933569.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0174]
 gi|190566422|ref|ZP_03019340.1| putative flagellar hook protein FlgE [Bacillus anthracis
          Tsiankovskii-I]
 gi|227815486|ref|YP_002815495.1| putative flagellar hook protein FlgE [Bacillus anthracis str. CDC
          684]
 gi|229600977|ref|YP_002866149.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0248]
 gi|254683244|ref|ZP_05147105.1| flagellar hook protein FlgE [Bacillus anthracis str. CNEVA-9066]
 gi|254723830|ref|ZP_05185616.1| flagellar hook protein FlgE [Bacillus anthracis str. A1055]
 gi|254734597|ref|ZP_05192309.1| flagellar hook protein FlgE [Bacillus anthracis str. Western
          North America USA6153]
 gi|254741006|ref|ZP_05198694.1| flagellar hook protein FlgE [Bacillus anthracis str. Kruger B]
 gi|254755249|ref|ZP_05207283.1| flagellar hook protein FlgE [Bacillus anthracis str. Vollum]
 gi|254759785|ref|ZP_05211809.1| flagellar hook protein FlgE [Bacillus anthracis str. Australia
          94]
 gi|30255979|gb|AAP25614.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          Ames]
 gi|47502123|gb|AAT30799.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          'Ames Ancestor']
 gi|49178510|gb|AAT53886.1| flagellar hook protein FlgE, putative [Bacillus anthracis str.
          Sterne]
 gi|164714689|gb|EDR20207.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0488]
 gi|167512942|gb|EDR88315.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0193]
 gi|167531503|gb|EDR94181.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0442]
 gi|170128618|gb|EDS97485.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0389]
 gi|170669847|gb|EDT20588.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0465]
 gi|172083746|gb|EDT68806.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0174]
 gi|190562557|gb|EDV16524.1| putative flagellar hook protein FlgE [Bacillus anthracis
          Tsiankovskii-I]
 gi|227006608|gb|ACP16351.1| putative flagellar hook protein FlgE [Bacillus anthracis str. CDC
          684]
 gi|229265385|gb|ACQ47022.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
          A0248]
          Length = 437

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|218902868|ref|YP_002450702.1| putative flagellar hook protein FlgE [Bacillus cereus AH820]
 gi|218535884|gb|ACK88282.1| putative flagellar hook protein FlgE [Bacillus cereus AH820]
          Length = 437

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|83717394|ref|YP_438390.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           E264]
 gi|167614838|ref|ZP_02383473.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           Bt4]
 gi|257141423|ref|ZP_05589685.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           E264]
 gi|83651219|gb|ABC35283.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           E264]
          Length = 241

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR +   ++    + +M  T   L+R
Sbjct: 195 GHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADTGNRLIR 240


>gi|30019797|ref|NP_831428.1| flagellar hook protein FlgE [Bacillus cereus ATCC 14579]
 gi|229043508|ref|ZP_04191218.1| Flagellar hook protein FlgE [Bacillus cereus AH676]
 gi|229127079|ref|ZP_04256078.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-Cer4]
 gi|229149956|ref|ZP_04278184.1| Flagellar hook protein FlgE [Bacillus cereus m1550]
 gi|296502353|ref|YP_003664053.1| flagellar hook protein FlgE [Bacillus thuringiensis BMB171]
 gi|29895342|gb|AAP08629.1| Flagellar hook protein flgE [Bacillus cereus ATCC 14579]
 gi|228633637|gb|EEK90238.1| Flagellar hook protein FlgE [Bacillus cereus m1550]
 gi|228656432|gb|EEL12271.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-Cer4]
 gi|228725886|gb|EEL77133.1| Flagellar hook protein FlgE [Bacillus cereus AH676]
 gi|296323405|gb|ADH06333.1| flagellar hook protein FlgE [Bacillus thuringiensis BMB171]
          Length = 437

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|223038370|ref|ZP_03608664.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Campylobacter rectus RM3267]
 gi|222880227|gb|EEF15314.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Campylobacter rectus RM3267]
          Length = 41

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             NV++      +    R + AN +TI  S +M+ T L L
Sbjct: 1   MSNVDLSRSLTQLIVVQRGFQANSKTITTSDEMLNTLLQL 40


>gi|87119675|ref|ZP_01075572.1| hypothetical protein MED121_07040 [Marinomonas sp. MED121]
 gi|86165151|gb|EAQ66419.1| hypothetical protein MED121_07040 [Marinomonas sp. MED121]
          Length = 247

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 25/57 (43%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           F+     A  SG ++  NV+ + E   +   +R +  N++ +    +    +  +L+
Sbjct: 188 FEQDFTAALKSGFLESSNVSAVEELTKIMSLSRQFEMNIKVMDTVRNNGNASARILQ 244


>gi|228914332|ref|ZP_04077947.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          pulsiensis BGSC 4CC1]
 gi|228845326|gb|EEM90362.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          pulsiensis BGSC 4CC1]
          Length = 437

 Score = 41.8 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|228958033|ref|ZP_04119769.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          pakistani str. T13001]
 gi|228801658|gb|EEM48539.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          pakistani str. T13001]
          Length = 437

 Score = 41.8 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|229090715|ref|ZP_04221948.1| Flagellar hook protein FlgE [Bacillus cereus Rock3-42]
 gi|228692657|gb|EEL46383.1| Flagellar hook protein FlgE [Bacillus cereus Rock3-42]
          Length = 437

 Score = 41.8 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|229144365|ref|ZP_04272771.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-ST24]
 gi|228639152|gb|EEK95576.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-ST24]
          Length = 437

 Score = 41.8 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|254511786|ref|ZP_05123853.1| flagellar hook-associated protein FlgK [Rhodobacteraceae
          bacterium KLH11]
 gi|221535497|gb|EEE38485.1| flagellar hook-associated protein FlgK [Rhodobacteraceae
          bacterium KLH11]
          Length = 483

 Score = 41.8 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A  GL   S    ++S NIANA T G       Y R+T+          GVRV
Sbjct: 3  MSTALNNALGGLNAASRGAAVVSGNIANALTPG-------YARRTLELTTSPISGNGVRV 55

Query: 64 KKIGVDQST 72
            I   Q  
Sbjct: 56 VGITRHQDP 64


>gi|196044997|ref|ZP_03112230.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB108]
 gi|300117326|ref|ZP_07055116.1| flagellar hook protein FlgE [Bacillus cereus SJ1]
 gi|196023999|gb|EDX62673.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB108]
 gi|298725161|gb|EFI65813.1| flagellar hook protein FlgE [Bacillus cereus SJ1]
          Length = 437

 Score = 41.8 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|134283656|ref|ZP_01770355.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 305]
 gi|134245065|gb|EBA45160.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 305]
          Length = 404

 Score = 41.8 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  +   +    R Y AN QTIK    +  T ++L
Sbjct: 366 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLINL 404


>gi|52143704|ref|YP_083124.1| flagellar hook protein FlgE [Bacillus cereus E33L]
 gi|228926789|ref|ZP_04089857.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          pondicheriensis BGSC 4BA1]
 gi|229121305|ref|ZP_04250536.1| Flagellar hook protein FlgE [Bacillus cereus 95/8201]
 gi|51977173|gb|AAU18723.1| flagellar hook protein [Bacillus cereus E33L]
 gi|228662150|gb|EEL17759.1| Flagellar hook protein FlgE [Bacillus cereus 95/8201]
 gi|228832902|gb|EEM78471.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          pondicheriensis BGSC 4BA1]
          Length = 437

 Score = 41.8 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|194428463|ref|ZP_03061003.1| flagellar hook protein FlgE [Escherichia coli B171]
 gi|194413515|gb|EDX29797.1| flagellar hook protein FlgE [Escherichia coli B171]
          Length = 396

 Score = 41.8 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|15642195|ref|NP_231827.1| flagellar basal body rod protein FlgF [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121586260|ref|ZP_01676050.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 2740-80]
 gi|121726526|ref|ZP_01679775.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V52]
 gi|147673274|ref|YP_001217713.1| flagellar basal body rod protein FlgF [Vibrio cholerae O395]
 gi|153213604|ref|ZP_01948877.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 1587]
 gi|153817120|ref|ZP_01969787.1| flagellar basal-body rod protein FlgF [Vibrio cholerae NCTC 8457]
 gi|153820819|ref|ZP_01973486.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33]
 gi|153825314|ref|ZP_01977981.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-2]
 gi|153829346|ref|ZP_01982013.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 623-39]
 gi|183179566|ref|ZP_02957777.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-3]
 gi|227082320|ref|YP_002810871.1| flagellar basal-body rod protein FlgF [Vibrio cholerae M66-2]
 gi|229507727|ref|ZP_04397232.1| flagellar basal-body rod protein FlgF [Vibrio cholerae BX 330286]
 gi|229512078|ref|ZP_04401557.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33]
 gi|229513840|ref|ZP_04403302.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TMA 21]
 gi|229519214|ref|ZP_04408657.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC9]
 gi|229522145|ref|ZP_04411562.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TM 11079-80]
 gi|229524191|ref|ZP_04413596.1| flagellar basal-body rod protein FlgF [Vibrio cholerae bv. albensis
           VL426]
 gi|229528799|ref|ZP_04418189.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 12129(1)]
 gi|229607231|ref|YP_002877879.1| flagellar basal body rod protein FlgF [Vibrio cholerae MJ-1236]
 gi|254225802|ref|ZP_04919407.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V51]
 gi|254849325|ref|ZP_05238675.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MO10]
 gi|255747105|ref|ZP_05421050.1| flagellar basal-body rod protein FlgF [Vibrio cholera CIRS 101]
 gi|262161351|ref|ZP_06030461.1| flagellar basal-body rod protein FlgF [Vibrio cholerae INDRE 91/1]
 gi|262167778|ref|ZP_06035480.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC27]
 gi|262191688|ref|ZP_06049864.1| flagellar basal-body rod protein FlgF [Vibrio cholerae CT 5369-93]
 gi|297580842|ref|ZP_06942767.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC385]
 gi|298500426|ref|ZP_07010231.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MAK 757]
 gi|9656752|gb|AAF95341.1| flagellar basal-body rod protein FlgF [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121549526|gb|EAX59552.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 2740-80]
 gi|121630979|gb|EAX63358.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V52]
 gi|124115803|gb|EAY34623.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 1587]
 gi|125621708|gb|EAZ50037.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V51]
 gi|126512388|gb|EAZ74982.1| flagellar basal-body rod protein FlgF [Vibrio cholerae NCTC 8457]
 gi|126521611|gb|EAZ78834.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33]
 gi|146315157|gb|ABQ19696.1| flagellar basal-body rod protein FlgF [Vibrio cholerae O395]
 gi|148875187|gb|EDL73322.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 623-39]
 gi|149740998|gb|EDM55067.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-2]
 gi|183012977|gb|EDT88277.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-3]
 gi|227010208|gb|ACP06420.1| flagellar basal-body rod protein FlgF [Vibrio cholerae M66-2]
 gi|227014092|gb|ACP10302.1| flagellar basal-body rod protein FlgF [Vibrio cholerae O395]
 gi|229332573|gb|EEN98059.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 12129(1)]
 gi|229337772|gb|EEO02789.1| flagellar basal-body rod protein FlgF [Vibrio cholerae bv. albensis
           VL426]
 gi|229341070|gb|EEO06075.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TM 11079-80]
 gi|229343903|gb|EEO08878.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC9]
 gi|229349021|gb|EEO13978.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TMA 21]
 gi|229352043|gb|EEO16984.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33]
 gi|229355232|gb|EEO20153.1| flagellar basal-body rod protein FlgF [Vibrio cholerae BX 330286]
 gi|229369886|gb|ACQ60309.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MJ-1236]
 gi|254845030|gb|EET23444.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MO10]
 gi|255735507|gb|EET90907.1| flagellar basal-body rod protein FlgF [Vibrio cholera CIRS 101]
 gi|262023843|gb|EEY42542.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC27]
 gi|262028662|gb|EEY47316.1| flagellar basal-body rod protein FlgF [Vibrio cholerae INDRE 91/1]
 gi|262032427|gb|EEY50989.1| flagellar basal-body rod protein FlgF [Vibrio cholerae CT 5369-93]
 gi|297534668|gb|EFH73504.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC385]
 gi|297541119|gb|EFH77173.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MAK 757]
 gi|327484715|gb|AEA79122.1| Flagellar basal-body rod protein FlgF [Vibrio cholerae LMA3894-4]
          Length = 249

 Score = 41.8 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NVN + E   + +  R +   ++ +  + +M   +  LLR
Sbjct: 201 TGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDKASDSLLR 247


>gi|228933037|ref|ZP_04095900.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          andalousiensis BGSC 4AW1]
 gi|228826638|gb|EEM72409.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          andalousiensis BGSC 4AW1]
          Length = 437

 Score = 41.5 bits (97), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|254473360|ref|ZP_05086757.1| flagellar basal body rod protein [Pseudovibrio sp. JE062]
 gi|211957476|gb|EEA92679.1| flagellar basal body rod protein [Pseudovibrio sp. JE062]
          Length = 241

 Score = 41.5 bits (97), Expect = 0.035,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 18/45 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           A G V+  N+N + E   +    R + +    ++    +   T+ 
Sbjct: 192 AQGFVEGANINPISEITKLITITRAFESTNSMMQSVESIRQQTIR 236



 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 9/59 (15%)

Query: 7  SAHIANSG-LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          S +++ SG +A++  R++ ++ N+AN  T G       YR   + F+ ++   G   V 
Sbjct: 5  SLYVSLSGQMALER-RLETVARNVANMETAG-------YRADEVKFDSLVKRPGKDPVT 55


>gi|222824502|ref|YP_002576076.1| flagellar hook protein FlgE [Campylobacter lari RM2100]
 gi|222539723|gb|ACM64824.1| flagellar hook protein FlgE [Campylobacter lari RM2100]
          Length = 541

 Score = 41.5 bits (97), Expect = 0.035,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 23/45 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++ V   ++    + Y ++ ++I  +  M+   +++ R
Sbjct: 497 YLEQSNVDLSVAFTNLITLQKAYDSSSKSITTADQMIQKAINMKR 541


>gi|301053291|ref|YP_003791502.1| flagellar hook protein [Bacillus anthracis CI]
 gi|300375460|gb|ADK04364.1| flagellar hook protein [Bacillus cereus biovar anthracis str. CI]
          Length = 437

 Score = 41.5 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|228945356|ref|ZP_04107711.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          monterrey BGSC 4AJ1]
 gi|228814328|gb|EEM60594.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
          monterrey BGSC 4AJ1]
          Length = 437

 Score = 41.5 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|126445461|ref|YP_001061247.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           668]
 gi|167725931|ref|ZP_02409167.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           DM98]
 gi|254182893|ref|ZP_04889486.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1655]
 gi|254299685|ref|ZP_04967134.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           406e]
 gi|126224952|gb|ABN88457.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           668]
 gi|157809369|gb|EDO86539.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           406e]
 gi|184213427|gb|EDU10470.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1655]
          Length = 241

 Score = 41.5 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR +   ++    + +M      L+R
Sbjct: 195 GHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADAGNRLIR 240


>gi|294013087|ref|YP_003546547.1| flagellar basal-body rod protein FlgF [Sphingobium japonicum UT26S]
 gi|292676417|dbj|BAI97935.1| flagellar basal-body rod protein FlgF [Sphingobium japonicum UT26S]
          Length = 246

 Score = 41.5 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 79  PGHPVANASG-IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P  P+A  +G  ++  NVN       M E +R +   ++ I  +  +      L+R
Sbjct: 189 PDDPIATVTGGSLEGSNVNATSALVQMIEASRAWETQIKMIDTAKQLDDGGASLMR 244



 Score = 33.4 bits (76), Expect = 9.6,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
          MD L+   + A + +    AR   IS N+AN  TTG
Sbjct: 1  MDRLV---NTALTAMRGAMARQAAISNNLANVNTTG 33


>gi|168186142|ref|ZP_02620777.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str.
           Eklund]
 gi|169295678|gb|EDS77811.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str.
           Eklund]
          Length = 259

 Score = 41.5 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  N+NV+   +DM  + R + +N + ++   + +  T+ ++ R
Sbjct: 210 KQGYLEKSNINVMEAVSDMMMSMRNFESNQKLVQSLDETLGKTVNEVGR 258



 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/33 (48%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I S + A SGL  Q A+  +IS N+ANA T G
Sbjct: 1  MIRSIYTAVSGLINQEAQQDVISNNLANATTVG 33


>gi|23092316|gb|AAN08641.1| FlgF [Aeromonas hydrophila]
          Length = 248

 Score = 41.5 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NVNV+ E  ++    R +   ++ +K + +       LLR
Sbjct: 200 AGSLEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEENDEAQTQLLR 246


>gi|196039080|ref|ZP_03106387.1| putative flagellar hook protein FlgE [Bacillus cereus NVH0597-99]
 gi|196030225|gb|EDX68825.1| putative flagellar hook protein FlgE [Bacillus cereus NVH0597-99]
          Length = 437

 Score = 41.5 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.056,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|322379368|ref|ZP_08053739.1| flagellar basal body rod protein FlgB [Helicobacter suis HS1]
 gi|322380861|ref|ZP_08054951.1| flagellar basal body rod protein FlgB [Helicobacter suis HS5]
 gi|321146712|gb|EFX41522.1| flagellar basal body rod protein FlgB [Helicobacter suis HS5]
 gi|321148186|gb|EFX42715.1| flagellar basal body rod protein FlgB [Helicobacter suis HS1]
          Length = 140

 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 32/140 (22%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ--- 70
            +  +S R  +I+ NIAN  T         YR + + FE ++       V     DQ   
Sbjct: 13  AMDYRSLRQDLIASNIANVDT-------PFYRPRDVDFETMLAHKK-AEVFDHKKDQILQ 64

Query: 71  ---------STFVEE-------FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                    S  + E       F  GH +A   G     +V++ +ET++M + + +Y+A 
Sbjct: 65  LAKTNKRHLSPGLSESQKATLFFRDGH-LAKNDGN----SVDLDIETSEMGKNSTMYLAL 119

Query: 115 LQTIKQSHDMMTTTLDLLRD 134
              +K+   ++   +D  ++
Sbjct: 120 TTALKKHRGIVNYAIDAAKN 139


>gi|222053731|ref|YP_002536093.1| flagellar basal-body rod protein FlgF [Geobacter sp. FRC-32]
 gi|221563020|gb|ACM18992.1| flagellar basal-body rod protein FlgF [Geobacter sp. FRC-32]
          Length = 244

 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G ++  NVNV+ E   M ET R + +  + ++   D+      DL R
Sbjct: 195 QQGALEGSNVNVVAEMVRMIETTRYFESCQKVVRSYDDITGKAANDLGR 243



 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 13/76 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          A SG      R+ +IS N+ANA T G       ++   + FE V+  S          + 
Sbjct: 8  ALSGNLAAMRRLDVISNNLANANTAG-------FKGDRLQFESVLASSKSQSQAAASPND 60

Query: 71 ST------FVEEFDPG 80
          S       F  ++ PG
Sbjct: 61 SPVFSSEIFFTDYSPG 76


>gi|90021855|ref|YP_527682.1| ribonuclease III [Saccharophagus degradans 2-40]
 gi|89951455|gb|ABD81470.1| flagellar basal body FlaE [Saccharophagus degradans 2-40]
          Length = 804

 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  +G ++  NV++  +  ++    R + A+ +TI+ +  +  T ++L
Sbjct: 756 AVQAGALEESNVDLSEQLVNLIIAQRNFQASAKTIETADAVTQTIINL 803



 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 5/65 (7%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVRV 63
             A SG+   S+ + +   NIANA TTG         D Y   ++    V     GV+V
Sbjct: 3  FDTALSGIRAASSDLSVTGNNIANASTTGFKASRAEFGDVY-ATSVLGAGVNAIGSGVQV 61

Query: 64 KKIGV 68
          +++  
Sbjct: 62 QEVAQ 66


>gi|15964409|ref|NP_384762.1| flagellar basal body rod protein FlgF [Sinorhizobium meliloti
          1021]
 gi|307311551|ref|ZP_07591192.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti
          BL225C]
 gi|17380373|sp|O54248|FLGF_RHIME RecName: Full=Flagellar basal-body rod protein flgF
 gi|15073586|emb|CAC45228.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
 gi|306899568|gb|EFN30197.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti
          BL225C]
          Length = 241

 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 10/58 (17%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           L+ Q     R+  +++NIAN+ T G       +R   + F +V+  +   +V  +  
Sbjct: 8  ALSSQMALEKRLNTLADNIANSNTVG-------FRATEVKFNQVLGDTKPTKVSYVSE 58



 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 17/92 (18%)

Query: 58  SGGVRVKKIGVDQSTFV---EEFDPGH--PVANAS------------GIVKYPNVNVLVE 100
             GV++  +G+ ++ F      +D     P A               G ++  NVN + E
Sbjct: 146 QNGVQIALLGLYEADFSKGFMRYDNSSVMPAAQPEPVVDRFDVGVMQGFLEESNVNAIQE 205

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            + +    R +      ++ S   +   ++ L
Sbjct: 206 MSQLIMITRAFDNVTALMRDSEGSLDKAIETL 237


>gi|254973892|ref|ZP_05270364.1| putative flagellar hook-associated protein [Clostridium difficile
          QCD-66c26]
 gi|255091277|ref|ZP_05320755.1| putative flagellar hook-associated protein [Clostridium difficile
          CIP 107932]
 gi|255312936|ref|ZP_05354519.1| putative flagellar hook-associated protein [Clostridium difficile
          QCD-76w55]
 gi|255515695|ref|ZP_05383371.1| putative flagellar hook-associated protein [Clostridium difficile
          QCD-97b34]
 gi|255648789|ref|ZP_05395691.1| putative flagellar hook-associated protein [Clostridium difficile
          QCD-37x79]
 gi|260682009|ref|YP_003213294.1| putative flagellar hook-associated protein [Clostridium difficile
          CD196]
 gi|260685607|ref|YP_003216740.1| putative flagellar hook-associated protein [Clostridium difficile
          R20291]
 gi|260208172|emb|CBA60493.1| putative flagellar hook-associated protein [Clostridium difficile
          CD196]
 gi|260211623|emb|CBE01861.1| putative flagellar hook-associated protein [Clostridium difficile
          R20291]
          Length = 436

 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M  L +  + ANSG+      +Q IS NI+N  T G       Y R+   F  
Sbjct: 1  MAGLFSILNTANSGMNAHQKAIQTISHNISNLDTDG-------YSRQRTEFAT 46



 Score = 37.2 bits (86), Expect = 0.86,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 16/33 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             V++  E  ++ +  R Y A+ + +  +  ++
Sbjct: 396 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLL 428


>gi|170725952|ref|YP_001759978.1| flagellar basal body rod protein FlgB [Shewanella woodyi ATCC
           51908]
 gi|169811299|gb|ACA85883.1| flagellar basal-body rod protein FlgB [Shewanella woodyi ATCC
           51908]
          Length = 132

 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 19/120 (15%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           S R ++IS NIANA T         Y+ + I F++ +  +   + + + +  S     FD
Sbjct: 20  SQRAEVISSNIANADTPH-------YKARDIDFDKALQAATSQQ-RGLAMTGSDSKH-FD 70

Query: 79  PGHPVANASGIVKYPN---------VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                    G  + PN         V++  E ++  +    Y  +L  +      +   L
Sbjct: 71  LAALSEQHYGY-RVPNQPDTGDGNTVDIQQEQSEFMQNALEYQMSLGFLDSKFSGLKKAL 129


>gi|325922824|ref|ZP_08184552.1| hypothetical protein XGA_3583 [Xanthomonas gardneri ATCC 19865]
 gi|325546711|gb|EGD17837.1| hypothetical protein XGA_3583 [Xanthomonas gardneri ATCC 19865]
          Length = 98

 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 31/128 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+ V   R Q+ + N+A            P +            +GGV   
Sbjct: 1   MSISPIASSGMQVAVLRQQVAASNMA-----RQPVDGSPRQA----VAASTQANGGVAAS 51

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +           DP  P  +                 +       + AN   +++S +M
Sbjct: 52  VVDASS-------DPSAPATD---------------LVEGLSARNDFQANATALRRSDEM 89

Query: 125 MTTTLDLL 132
           + + LD+L
Sbjct: 90  LGSLLDVL 97


>gi|285018212|ref|YP_003375923.1| flagellar basal body protein [Xanthomonas albilineans GPE PC73]
 gi|283473430|emb|CBA15935.1| probable flagellar basal body protein [Xanthomonas albilineans]
          Length = 132

 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          + + +   +    L ++  RM++I+ NI+N  T G       Y+ + + F+  M  + G 
Sbjct: 3  NPISSYFGVHGDALPLREQRMKLIASNISNVDTPG-------YKAQDLDFDAAMRAAQGQ 55

Query: 62 R 62
          R
Sbjct: 56 R 56


>gi|196033295|ref|ZP_03100707.1| putative flagellar hook protein FlgE [Bacillus cereus W]
 gi|195993729|gb|EDX57685.1| putative flagellar hook protein FlgE [Bacillus cereus W]
          Length = 437

 Score = 41.5 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 41.1 bits (96), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|78043872|ref|YP_359837.1| flagellar basal-body rod protein FlgB [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995987|gb|ABB14886.1| flagellar basal-body rod protein FlgB [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 136

 Score = 41.5 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 35/138 (25%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK-IGVDQST 72
           G+   + R Q I+ NIAN  T G       YR++ + FEE        +V++ +   +  
Sbjct: 15  GIDAATIRQQAIAHNIANVNTPG-------YRKEVVVFEE--------KVQEFLNQKKGN 59

Query: 73  FVEEFDPGHP-VANASGI----------------VKYPNVNVLVETADMRETNRLYMANL 115
           F  +    HP    A G                 +   NV++  E  D+      Y   +
Sbjct: 60  FSLK--TTHPRHLTAKGFSLPFAEIKRENSTAMRIDKNNVDIETEMVDLAYNQLYYETAV 117

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +K +   +   +   R
Sbjct: 118 ERLKGTLASLEMVITGGR 135


>gi|254457917|ref|ZP_05071344.1| flagellar basal body rod protein [Campylobacterales bacterium GD
          1]
 gi|207085310|gb|EDZ62595.1| flagellar basal body rod protein [Campylobacterales bacterium GD
          1]
          Length = 273

 Score = 41.5 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPG 40
          + +G+  Q  R+  I+ N+AN  T G    
Sbjct: 8  SAAGMVTQFNRLDTIANNLANVNTVGFKED 37



 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 5/54 (9%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNR---LYMANLQTIKQSHDMMTTTLD 130
            +  A   G V+  NVN +     M ETNR   +Y   +    Q  DM    ++
Sbjct: 216 DNTEAVMQGFVEKSNVNAVKMMTQMIETNRLVGMYQKAMSV--QMDDMNNDAIN 267


>gi|167576663|ref|ZP_02369537.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           TXDOH]
          Length = 241

 Score = 41.5 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR +   ++    + +M  T   L+R
Sbjct: 195 GHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADTGNRLIR 240


>gi|117621022|ref|YP_857346.1| flagellar basal-body rod protein FlgB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562429|gb|ABK39377.1| flagellar basal-body rod protein FlgB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 132

 Score = 41.5 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 53/133 (39%), Gaps = 20/133 (15%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I    L+V+S R +++S NIANA T G       ++ + I+F + +  +   +   
Sbjct: 7   KAFGIHQYTLSVRSKRAEVLSSNIANADTPG-------FKARDINFSQALEEAQQQQGFG 59

Query: 66  IGVD---------QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           +             +  V ++   +P+   +G      V+V  E ++    +  Y  +L+
Sbjct: 60  LATTSEKHFALQMDAPGVTQY--RNPLQPDTG--DGNTVDVQQERSEFLRNSLEYQTSLE 115

Query: 117 TIKQSHDMMTTTL 129
            +      +   L
Sbjct: 116 FMNSKISGLLKAL 128


>gi|260768775|ref|ZP_05877709.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
          102972]
 gi|260616805|gb|EEX41990.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
          102972]
 gi|315180478|gb|ADT87392.1| hypothetical flagellar hook-associated protein [Vibrio furnissii
          NCTC 11218]
          Length = 456

 Score = 41.5 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +IA SG       M + ++N AN  + G       Y RK +    V++G+ G    
Sbjct: 1  MSMYNIALSGAMANQVAMNVTAQNTANINSAG-------YSRKVVDQSAVIYGNAGPNSA 53

Query: 65 KIGVDQSTFVEEFDPG 80
            GV  ++     D  
Sbjct: 54 GSGVSVTSIRRVSDQA 69


>gi|49480337|ref|YP_035873.1| flagellar hook protein FlgE [Bacillus thuringiensis serovar
          konkukian str. 97-27]
 gi|49331893|gb|AAT62539.1| flagellar hook protein [Bacillus thuringiensis serovar konkukian
          str. 97-27]
          Length = 437

 Score = 41.5 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNN 48



 Score = 40.7 bits (95), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 383 ENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|313895783|ref|ZP_07829337.1| flagellar hook-basal body complex protein FlhP domain protein
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975208|gb|EFR40669.1| flagellar hook-basal body complex protein FlhP domain protein
           [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 117

 Score = 41.5 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 25/43 (58%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  + +DM  T R + +N + I  S +M+ T +++ R
Sbjct: 75  EMSNVDISDQFSDMIITQRGFQSNSKIITVSDEMLETLINMKR 117


>gi|292492360|ref|YP_003527799.1| flagellar basal-body rod protein FlgB [Nitrosococcus halophilus
          Nc4]
 gi|291580955|gb|ADE15412.1| flagellar basal-body rod protein FlgB [Nitrosococcus halophilus
          Nc4]
          Length = 133

 Score = 41.5 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++  I    L++ S R ++++ N+ANA T G       Y+ + I F+  +  + G
Sbjct: 7  SALGIHPYALSLWSRRAELLAANLANADTPG-------YKARDIDFKTALQQAQG 54


>gi|316936123|ref|YP_004111105.1| flagellar hook-basal body protein [Rhodopseudomonas palustris
          DX-1]
 gi|315603837|gb|ADU46372.1| flagellar hook-basal body protein [Rhodopseudomonas palustris
          DX-1]
          Length = 422

 Score = 41.5 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 7/60 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  +   A S L  QS  + +IS+NIAN++T G       Y+  + SF +++  + G   
Sbjct: 3  LTGALSSAISALNAQSQSLAMISDNIANSQTVG-------YKTTSASFSQLVTAASGAST 55


>gi|84624628|ref|YP_452000.1| hypothetical protein XOO_2971 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84368568|dbj|BAE69726.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 98

 Score = 41.5 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 31/128 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+ V + R Q+ + N+A     G        +R++++     +G     V 
Sbjct: 1   MSISSIASSGMQVAALRQQVAASNVARLPVDGS-------QRQSVAASTQANGGVAANVV 53

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D S                            +  +       + AN   +++S +M
Sbjct: 54  NVSADPSA------------------------PATDLVEGVSARNDFQANANVLRRSDEM 89

Query: 125 MTTTLDLL 132
           + + LD+L
Sbjct: 90  LGSLLDVL 97


>gi|120554030|ref|YP_958381.1| flagellar basal body rod protein FlgB [Marinobacter aquaeolei VT8]
 gi|120323879|gb|ABM18194.1| flagellar basal-body rod protein FlgB [Marinobacter aquaeolei VT8]
          Length = 132

 Score = 41.5 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            L  +  R ++++ N+ANA T G       Y+ + + F+ +M  +             + 
Sbjct: 15  ALQARVKRAEVLANNLANADTPG-------YKARDVDFQAMMQKAQDSMTGFGMTTTHSG 67

Query: 74  VEEFDPGHPVANASGIVKYP--------NVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
               D   P A+   + + P         V+   E          Y A+ Q +      +
Sbjct: 68  HM--DTSSPGADGELLYRTPHQPSIDGNTVDAQAEQTRFMRNAMDYQASFQFLSSRFSGL 125

Query: 126 TTTL 129
           T  L
Sbjct: 126 TKAL 129


>gi|312962293|ref|ZP_07776784.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens WH6]
 gi|311283220|gb|EFQ61810.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens WH6]
          Length = 38

 Score = 41.5 bits (97), Expect = 0.040,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMT 126
            + E  +M  T R Y  N + I  +  M++
Sbjct: 3   TVEEMVNMITTQRAYEMNSKVISTADQMLS 32


>gi|260574402|ref|ZP_05842406.1| flagellar basal-body rod protein FlgF [Rhodobacter sp. SW2]
 gi|259023298|gb|EEW26590.1| flagellar basal-body rod protein FlgF [Rhodobacter sp. SW2]
          Length = 236

 Score = 41.5 bits (97), Expect = 0.040,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYM 112
            G ++  NVN + E A M E  R Y 
Sbjct: 189 QGYIEDSNVNPISEIARMIEVQRAYE 214



 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 7/39 (17%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          MQ+++ NIAN  TTG       +RR+ + F E +    G
Sbjct: 19 MQVVANNIANISTTG-------FRREGVVFAEYVKRMDG 50


>gi|83591885|ref|YP_425637.1| hypothetical protein Rru_A0546 [Rhodospirillum rubrum ATCC 11170]
 gi|83574799|gb|ABC21350.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 661

 Score = 41.5 bits (97), Expect = 0.040,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E  +M  T R Y A  + I  + DM+   + + R
Sbjct: 619 EASTVDLGSEFTNMITTQRAYSAAAKIITTADDMLDELIRIKR 661



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 15/58 (25%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------MHGSGGVR 62
          SGL  QS+ +  I++N+ N  T G       Y+   ++F+ +         +  GGV+
Sbjct: 12 SGLQAQSSALGAIADNVTNVNTVG-------YKGTKVNFQTLVTQQVSLTAYSPGGVQ 62


>gi|289523333|ref|ZP_06440187.1| flagellar basal-body rod protein FlgG [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503025|gb|EFD24189.1| flagellar basal-body rod protein FlgG [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 256

 Score = 41.5 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTI----KQSHDMMT 126
           G ++  NVNV+ E   + E  R Y A+ +T+    +Q+  M+ 
Sbjct: 210 GALEKSNVNVVYEMVRLIEGQRAYEASARTLTMQDEQTGSMIN 252



 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +    + A+S + VQ   + + S N+AN  T G
Sbjct: 1  MFRGLYGASSAMLVQEKVIDVASNNLANVDTAG 33


>gi|260429026|ref|ZP_05783003.1| flagellar hook-associated protein FlgK [Citreicella sp. SE45]
 gi|260419649|gb|EEX12902.1| flagellar hook-associated protein FlgK [Citreicella sp. SE45]
          Length = 485

 Score = 41.5 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 7/63 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  +   A SGL   S    +++ NIANA T       + Y R+T+       G GGV++
Sbjct: 3  LSGALSNALSGLTANSRAASLVASNIANATT-------ESYGRRTLETSSRTVGVGGVQI 55

Query: 64 KKI 66
            +
Sbjct: 56 DGV 58


>gi|68164545|gb|AAY87274.1| predicted flagellar proximal rod protein [uncultured bacterium
           BAC17H8]
          Length = 251

 Score = 41.5 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVNV  E  +  E  R Y  N++ I  + ++      L+R
Sbjct: 204 HLELSNVNVTEELINSIEDQRAYEINVKMIASASELDEAGAALMR 248


>gi|115523522|ref|YP_780433.1| flagellar basal body FlaE domain-containing protein
           [Rhodopseudomonas palustris BisA53]
 gi|115517469|gb|ABJ05453.1| flagellar basal body FlaE domain protein [Rhodopseudomonas
           palustris BisA53]
          Length = 602

 Score = 41.5 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  N ++  E   +  T + Y AN + I  ++ M+   L+++R
Sbjct: 560 EASNTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLNVMR 602



 Score = 33.7 bits (77), Expect = 7.5,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  +   + +GL   S  ++ IS NIAN++TT 
Sbjct: 3  IFGALTTSVAGLRANSYALENISGNIANSQTTA 35


>gi|121607564|ref|YP_995371.1| flagellar basal-body rod protein FlgB [Verminephrobacter eiseniae
          EF01-2]
 gi|121552204|gb|ABM56353.1| flagellar basal-body rod protein FlgB [Verminephrobacter eiseniae
          EF01-2]
          Length = 141

 Score = 41.5 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 9/46 (19%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L  Q  R   I+ NIANA T G       Y  +   F + +    G
Sbjct: 18 LRAQRQR--TIASNIANADTPG-------YAARDFKFGDALREVAG 54


>gi|77464909|ref|YP_354413.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides
           2.4.1]
 gi|77389327|gb|ABA80512.1| hypothetical protein RSP_1331 [Rhodobacter sphaeroides 2.4.1]
          Length = 127

 Score = 41.5 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 26/126 (20%)

Query: 17  VQS------ARMQIISENIANARTTGDTPGSDPYRRKT-ISFEEVMHGSGGVRVKKIGVD 69
            QS       R ++++ N+ANA T G       YR +    FE    G+ G+R  + G  
Sbjct: 11  AQSMARHAGLRTEVVAHNLANADTPG-------YRAQDLPDFESYASGTVGLRTTRPGHL 63

Query: 70  QSTFVEEFDP---GHPVANASGIVKYPNVNVL---VETADMRETNRLYMANLQTIKQSHD 123
           +S      DP     P A +      PN N +    E        + +   L   + S  
Sbjct: 64  RSAEASATDPVPVEGPGAAS------PNGNTVSLEDEMVRAVAARQQHELALAIYQSSSR 117

Query: 124 MMTTTL 129
           ++ T+L
Sbjct: 118 LIRTSL 123


>gi|260886210|ref|ZP_05897473.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
          35185]
 gi|330839794|ref|YP_004414374.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
          35185]
 gi|260863929|gb|EEX78429.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
          35185]
 gi|329747558|gb|AEC00915.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
          35185]
          Length = 264

 Score = 41.5 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          ++   ++A SG+  ++ R  +I+ N+ANA ++G       Y+R     +E
Sbjct: 1  MLRGLYVAASGMITETNRTDVIANNLANAASSG-------YKRDEAINQE 43



 Score = 40.7 bits (95), Expect = 0.071,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G+++  NVN+  E   +    R+Y A  + +     M   T+ ++ R
Sbjct: 214 QQGMLENSNVNIASEMVSLINNYRIYEAGSRALVTQDSMTDKTVNEVGR 262


>gi|222147565|ref|YP_002548522.1| flagellar basal body rod protein FlgF [Agrobacterium vitis S4]
 gi|221734553|gb|ACM35516.1| flagellar basal body rod protein [Agrobacterium vitis S4]
          Length = 244

 Score = 41.5 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G V+  NVN + +   + + +R + +   ++ Q+ + M+ T+  L
Sbjct: 195 QGYVEQSNVNGISQMTQLIQVSRAFESISASMSQTENSMSETIKTL 240



 Score = 37.2 bits (86), Expect = 0.74,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 13/66 (19%)

Query: 4  LIASAHIANSGLAVQS---ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          + +  +++   L+ Q     R+  I++N+AN  T G       +R   + F+EV+  +G 
Sbjct: 1  MQSGMYVS---LSSQRALDKRLTTIADNMANVNTVG-------FRGTEVKFDEVVSRTGN 50

Query: 61 VRVKKI 66
           +  KI
Sbjct: 51 DQNAKI 56


>gi|144900942|emb|CAM77806.1| flagellar hook protein FlgE precursor [Magnetospirillum
          gryphiswaldense MSR-1]
          Length = 430

 Score = 41.5 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L+ + + A + L  QS  + IIS+N++N+ TTG       Y+  T SF+ ++  S
Sbjct: 3  LMGAMNSAVTALKAQSTALSIISDNLSNSSTTG-------YKANTTSFKTLVTQS 50


>gi|145298492|ref|YP_001141333.1| flagellar basal body rod protein FlgF [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851264|gb|ABO89585.1| flagellar basal body rod protein FlgF [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 248

 Score = 41.5 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NVNV+ E  ++    R +   ++ +K + +       LLR
Sbjct: 200 AGSLEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEENDEAQTQLLR 246


>gi|255591998|ref|XP_002535647.1| Flagellar basal-body rod protein flgG, putative [Ricinus
          communis]
 gi|223522413|gb|EEF26734.1| Flagellar basal-body rod protein flgG, putative [Ricinus
          communis]
          Length = 166

 Score = 41.5 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          +  Q   ++ I+ N+AN  T G       Y+R  +SF ++
Sbjct: 1  MQAQQLNVETIASNLANVNTAG-------YKRSRVSFSDL 33


>gi|51894143|ref|YP_076834.1| flagellar basal body and hook proteins [Symbiobacterium
           thermophilum IAM 14863]
 gi|51857832|dbj|BAD41990.1| flagellar basal body and hook proteins [Symbiobacterium
           thermophilum IAM 14863]
          Length = 231

 Score = 41.5 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +  NV++  E  D+  T R Y  N + ++   + +   + ++ +
Sbjct: 187 EASNVDLAKEMTDLIVTLRAYQVNQRALRVQDETLARAVTEIGK 230



 Score = 40.3 bits (94), Expect = 0.079,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 18/82 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANART------TGDTPG---------SDPYRRKT 48
          +I     + SG+AV+  R  ++++NIAN  T      T  +            DP     
Sbjct: 1  MIRGIEASRSGMAVEQLRTDVLADNIANMNTSGFKRATATSVEFDRMLIHRMGDP---TD 57

Query: 49 ISFEEVMHGSGGVRVKKIGVDQ 70
             +EV     G RV ++ VD+
Sbjct: 58 PRSQEVGTLGNGSRVDQVVVDE 79


>gi|150395479|ref|YP_001325946.1| flagellar basal body rod protein FlgF [Sinorhizobium medicae
          WSM419]
 gi|150026994|gb|ABR59111.1| flagellar basal body rod protein [Sinorhizobium medicae WSM419]
          Length = 241

 Score = 41.5 bits (97), Expect = 0.043,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 10/58 (17%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           L+ Q     R+  +++NIAN+ T G       +R   + F +V+  +   +V  +  
Sbjct: 8  ALSSQMALEKRLNTLADNIANSNTVG-------FRATEVKFNQVLGDTKPTKVSYVSE 58



 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 17/92 (18%)

Query: 58  SGGVRVKKIGVDQSTFV---EEFDPGH--PVANAS------------GIVKYPNVNVLVE 100
             GV+V  +G+ ++ F      +D     P A               G ++  NVN + E
Sbjct: 146 QNGVQVALLGLHEADFSKGFMRYDNSAVMPAAQPEPVVDRFDVGVMQGFLEESNVNAVQE 205

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            + +    R +      ++ S   +   ++ L
Sbjct: 206 MSQLIMITRAFDNVTALMRDSEGSIDKAIETL 237


>gi|1870712|gb|AAB48836.1| FlgF [Sinorhizobium meliloti]
          Length = 240

 Score = 41.5 bits (97), Expect = 0.043,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 10/58 (17%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           L+ Q     R+  +++NIAN+ T G       +R   + F +V+  +   +V  +  
Sbjct: 8  ALSSQMALEKRLNTLADNIANSNTVG-------FRATEVKFNQVLGDTKPTKVSYVSE 58



 Score = 33.7 bits (77), Expect = 7.6,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            G ++  NVN + E + +    R +  N+  + ++
Sbjct: 190 QGFLEESNVNGIQEMSQLIMITRAFD-NVTALMRA 223


>gi|77460469|ref|YP_349976.1| flagellar hook protein FlgE [Pseudomonas fluorescens Pf0-1]
 gi|77384472|gb|ABA75985.1| putative flagellar hook protein [Pseudomonas fluorescens Pf0-1]
          Length = 443

 Score = 41.5 bits (97), Expect = 0.043,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVN+  E  D+ +    Y AN +TI     +M T + +
Sbjct: 404 SNVNLTNELVDLIKGQSNYQANAKTISTQSTIMQTIIQM 442



 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 17/70 (24%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------- 58
          S +I  SGL   + ++ +   NIAN  T G       ++     FE+V   +        
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVATAG-------FKSSRAEFEDVYSSTRLGSGSKV 54

Query: 59 --GGVRVKKI 66
             GVR+  +
Sbjct: 55 IGNGVRLANV 64


>gi|304438314|ref|ZP_07398255.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368680|gb|EFM22364.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 266

 Score = 41.5 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G+++  N +V+ E  ++    R+Y A  + ++    ++   + D+ R
Sbjct: 216 EQGMLEMSNTSVVTEMVELINNYRVYEAGSKAVQTQDALLDKAVNDVGR 264



 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 7/43 (16%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          +    +IA SG+  ++    +I+ N+ANA TTG       Y+R
Sbjct: 1  MWRGLYIAASGMITETKHTDMIANNLANAATTG-------YKR 36


>gi|269103189|ref|ZP_06155886.1| flagellar basal-body rod protein FlgF [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163087|gb|EEZ41583.1| flagellar basal-body rod protein FlgF [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 249

 Score = 41.5 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NVN + E   + +  R +   ++ +K + +M  ++  L+R
Sbjct: 201 NGTLEGSNVNAVGEMTALIDLQRHFEMQVKLMKTAEEMDKSSSSLMR 247


>gi|328555246|gb|AEB25738.1| flagellar hook-associated protein FlgK [Bacillus
          amyloliquefaciens TA208]
 gi|328913607|gb|AEB65203.1| flagellar hook-filament junction [Bacillus amyloliquefaciens LL3]
          Length = 505

 Score = 41.5 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M         A   L+ Q   +  +S N+ANA T G       Y R+ ++ +  
Sbjct: 1  MPSTFMGLETARRALSAQQTALSTVSNNVANANTEG-------YTRQRVTLQST 47


>gi|327480020|gb|AEA83330.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
          stutzeri DSM 4166]
          Length = 558

 Score = 41.5 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 7/94 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVR 62
          S +I  SGL   S  + +   NIANA T G        SD Y    +   +   GS GV 
Sbjct: 2  SFNIGLSGLRAASKDLNVTGNNIANAGTVGFKQSRAEFSDVYAASVLGTGKNPQGS-GVL 60

Query: 63 VKKIGVDQSTFVEEFDPGHPV--ANASGIVKYPN 94
          +  I    +     +         N +G  +  N
Sbjct: 61 MSNISQQFNQGNINYTQNALDLAINGNGFFQVSN 94



 Score = 40.3 bits (94), Expect = 0.094,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  +G ++  NV +  +  ++    R Y AN +TI+    +  T ++L
Sbjct: 510 ALQAGALEDSNVELSDQLVNLIVAQRNYQANAKTIETESAITQTIINL 557


>gi|260222474|emb|CBA32074.1| hypothetical protein Csp_D30300 [Curvibacter putative symbiont of
          Hydra magnipapillata]
          Length = 656

 Score = 41.5 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 14/79 (17%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++  +I    L      +Q    NIAN  T G       Y R+ +  + V          
Sbjct: 1  MSILNIGTRALQANQIALQTAGNNIANVNTPG-------YSRQNVVLKAVEGQFSGGGYV 53

Query: 58 SGGVRVKKIGVDQSTFVEE 76
            GV V+ I    S F+  
Sbjct: 54 GKGVEVQTIQRSFSAFLTR 72


>gi|254504553|ref|ZP_05116704.1| flagellar hook-associated protein FlgK [Labrenzia alexandrii
          DFL-11]
 gi|222440624|gb|EEE47303.1| flagellar hook-associated protein FlgK [Labrenzia alexandrii
          DFL-11]
          Length = 631

 Score = 41.5 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          L ++ + A  G++    ++ + + NIANA T G       Y +KT+S      G G V
Sbjct: 3  LTSALNTAVFGISFNQRQIDVTASNIANADTAG-------YSKKTVSANAYFDGDGNV 53



 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 22/39 (56%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN+  E A + +    Y AN + ++  +D+M   L+++R
Sbjct: 593 VNLDAEMAFLVQLENAYSANARVMQTINDLMQELLNVVR 631


>gi|207092063|ref|ZP_03239850.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          HPKX_438_AG0C1]
          Length = 606

 Score = 41.5 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQHVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|119384846|ref|YP_915902.1| flagellar basal body rod protein FlgF [Paracoccus denitrificans
           PD1222]
 gi|119374613|gb|ABL70206.1| flagellar basal body rod protein [Paracoccus denitrificans PD1222]
          Length = 238

 Score = 41.5 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 14/88 (15%)

Query: 57  GSGGVRVKKIGV----DQSTFVEE----FDPGH---PVANA---SGIVKYPNVNVLVETA 102
            + G  V ++GV    D +    E    FDPG    P+  A    G ++  NV+ + E A
Sbjct: 147 SADGNPVGRVGVFASPDPARLRHEAGTLFDPGGAVDPLEGAVLRQGFLEDSNVDPVQEIA 206

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLD 130
            M E  R Y      + Q    +  T+ 
Sbjct: 207 RMIEVQRAYQLGQSFLDQEDQRIRQTIT 234



 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 10/45 (22%)

Query: 14 GLAVQS--AR-MQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
           L  QS   R M  ++ NIANA TTG       +RR+ + F E M
Sbjct: 8  ALTRQSGLMREMHTVANNIANANTTG-------FRREGVVFSEYM 45


>gi|330830302|ref|YP_004393254.1| flagellar basal-body rod protein FlgF [Aeromonas veronii B565]
 gi|328805438|gb|AEB50637.1| Flagellar basal-body rod protein FlgF [Aeromonas veronii B565]
          Length = 248

 Score = 41.5 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NVNV+ E  ++    R +   ++ +K + +       LLR
Sbjct: 200 AGSLEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEENDEAQTQLLR 246


>gi|322432968|ref|YP_004210217.1| flagellar hook-associated protein FlgK [Acidobacterium sp.
          MP5ACTX9]
 gi|321165195|gb|ADW70899.1| flagellar hook-associated protein FlgK [Acidobacterium sp.
          MP5ACTX9]
          Length = 457

 Score = 41.5 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 14/73 (19%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
          M  L+++ + A+  L  Q A + + + NIANA T G       Y R+T+S +E    S  
Sbjct: 1  MISLMSTLNTASEALMAQEAEISVTNNNIANASTAG-------YTRETVSLQEAAPTSQG 53

Query: 59 -----GGVRVKKI 66
                GV V  I
Sbjct: 54 ALSVGNGVEVAGI 66


>gi|56695116|ref|YP_165463.1| flagellar hook-associated protein FlgK [Ruegeria pomeroyi DSS-3]
 gi|56676853|gb|AAV93519.1| flagellar hook-associated protein FlgK, putative [Ruegeria
          pomeroyi DSS-3]
          Length = 483

 Score = 41.5 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 7/73 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + A+ + A SGL   S    + S+NIANA T G       Y R+++       G  GVR+
Sbjct: 3  ISAALNSALSGLTAASRATGVASDNIANALTPG-------YARRSLEVAGNTIGGAGVRI 55

Query: 64 KKIGVDQSTFVEE 76
            +  +    +  
Sbjct: 56 LGVVRNSDPVLLA 68


>gi|163784307|ref|ZP_02179217.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880425|gb|EDP74019.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 238

 Score = 41.5 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 11/76 (14%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           VK IG         + P     NA      G ++  NVN +    ++    R        
Sbjct: 168 VKPIGES------YYAPSSSQTNASYEIHQGFLENSNVNPIKAMTELINAQRRMEMYGNL 221

Query: 118 IKQSHDMMTTTLDLLR 133
           +K    +   ++++ R
Sbjct: 222 MKALDSVEQKSIEIGR 237


>gi|148980301|ref|ZP_01815988.1| putative flagellar basal-body rod protein [Vibrionales bacterium
           SWAT-3]
 gi|145961320|gb|EDK26630.1| putative flagellar basal-body rod protein [Vibrionales bacterium
           SWAT-3]
          Length = 244

 Score = 41.5 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV+ L E   +    R Y   ++ +  + ++      LL+
Sbjct: 197 SGYLEASNVSSLEELVSIMSLTRQYEMQIEVMASADEIAQIGNKLLK 243


>gi|330953726|gb|EGH53986.1| flagellar basal body rod protein FlgG [Pseudomonas syringae Cit
          7]
          Length = 113

 Score = 41.5 bits (97), Expect = 0.046,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ + ++A +GLA Q   +  IS N+AN  TTG
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTG 33


>gi|226939373|ref|YP_002794446.1| FlgF1 [Laribacter hongkongensis HLHK9]
 gi|226714299|gb|ACO73437.1| FlgF1 [Laribacter hongkongensis HLHK9]
          Length = 247

 Score = 41.5 bits (97), Expect = 0.046,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A+G+++  NVN +     M    R +  N++ ++ +         LL
Sbjct: 197 ATGMLEGSNVNPVDALTQMISHGRQFEFNVKLMQNADQNARRADQLL 243


>gi|157694040|ref|YP_001488502.1| flagellar basal-body rod protein [Bacillus pumilus SAFR-032]
 gi|157682798|gb|ABV63942.1| flagellar basal-body rod protein [Bacillus pumilus SAFR-032]
          Length = 279

 Score = 41.5 bits (97), Expect = 0.046,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A S +  Q  R +++S NIANA T G        R 
Sbjct: 1  MLKGLYTATSAMIAQERRTEMLSNNIANANTPGYKADEGTMRA 43



 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
           + G+ +  NV+V     +M    R +  N + ++     +     ++ R
Sbjct: 229 SQGVSELSNVDVTKSYTEMTTAYRAFETNQKVVQAYDKSLEKAVNEIGR 277


>gi|329898292|ref|ZP_08272375.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
          IMCC3088]
 gi|328920857|gb|EGG28300.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
          IMCC3088]
          Length = 124

 Score = 41.1 bits (96), Expect = 0.046,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          + +   +    L ++S R+Q++++NIANA T G       ++ + + F++V+    G
Sbjct: 1  MNSIFGVHEQALVLKSQRLQVLAKNIANADTPG-------FKARDVDFKQVLAAQAG 50


>gi|326319098|ref|YP_004236770.1| flagellar basal-body rod protein FlgF [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375934|gb|ADX48203.1| flagellar basal-body rod protein FlgF [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 246

 Score = 41.1 bits (96), Expect = 0.046,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 79  PGHPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           P  P A   SG ++  NVN +     M   +R + A ++ ++ + +   T   LL
Sbjct: 188 PNDPNARLLSGALEGSNVNAVESMVGMIAASRQFEAQMRLLQTTENNDKTAAQLL 242


>gi|255263716|ref|ZP_05343058.1| flagellar hook-associated protein FlgK [Thalassiobium sp. R2A62]
 gi|255106051|gb|EET48725.1| flagellar hook-associated protein FlgK [Thalassiobium sp. R2A62]
          Length = 479

 Score = 41.1 bits (96), Expect = 0.046,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 9/67 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGV 61
          + +S   A SGL   S   +I+S N+AN+ T G       Y R+ +     + G   GGV
Sbjct: 3  ISSSLSNALSGLTAASRAAEIVSSNLANSLTDG-------YARRRLDLSSQLTGGVGGGV 55

Query: 62 RVKKIGV 68
          ++  +  
Sbjct: 56 QIDGVAR 62



 Score = 40.3 bits (94), Expect = 0.100,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           V+   E  ++    + Y AN + I+   +MM T L L 
Sbjct: 441 VDTDQEMQNLLLIEQAYSANAKVIQTVDEMMQTLLRLG 478


>gi|192289142|ref|YP_001989747.1| flagellar hook protein FlgE [Rhodopseudomonas palustris TIE-1]
 gi|192282891|gb|ACE99271.1| flagellar basal body FlaE domain protein [Rhodopseudomonas
          palustris TIE-1]
          Length = 421

 Score = 41.1 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 15/70 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          L  +   A S L  QS  + +IS+NIAN+ TTG       Y+  +  F +++        
Sbjct: 3  LTGALSSAISALNAQSQSLSMISDNIANSDTTG-------YKTTSAMFSQLVTASSSATS 55

Query: 56 HGSGGVRVKK 65
          + SGGV V  
Sbjct: 56 YASGGVTVAG 65


>gi|114765245|ref|ZP_01444377.1| hypothetical protein 1100011001307_R2601_00410 [Pelagibaca
          bermudensis HTCC2601]
 gi|114542380|gb|EAU45408.1| hypothetical protein R2601_00410 [Roseovarius sp. HTCC2601]
          Length = 249

 Score = 41.1 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 20/92 (21%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
          MD    S ++A S L     ++ + + NIANA ++G       ++ + + FE  +     
Sbjct: 1  MD---NSTYVAISKLTALERQLDVTANNIANANSSG-------FKAERVLFETYLQKDDA 50

Query: 57 -----GSGGVRVKKIGVDQSTFVEEFDPGHPV 83
               G+  V  +   VD +  V     G+P+
Sbjct: 51 SLAGEGTNYVLDRGSYVDDTPGVVV-QTGNPL 81


>gi|229591865|ref|YP_002873984.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          SBW25]
 gi|229363731|emb|CAY51133.1| putative flagellar hook-associated protein [Pseudomonas
          fluorescens SBW25]
          Length = 682

 Score = 41.1 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 7/74 (9%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +I  SGL      + ++S NIANA T G +      R++TI      +  GGV + 
Sbjct: 1  MSLLNIGMSGLNAAQGSLSVLSNNIANANTAGYS------RQQTIQSANASNQYGGVFIG 54

Query: 65 KIGVDQSTFVEEFD 78
            G   +     ++
Sbjct: 55 S-GTTLADVRRVYN 67


>gi|154687759|ref|YP_001422920.1| FlhO [Bacillus amyloliquefaciens FZB42]
 gi|154353610|gb|ABS75689.1| FlhO [Bacillus amyloliquefaciens FZB42]
          Length = 265

 Score = 41.1 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
             G+ +  NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 216 KQGVSELSNVDVTSTYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 264



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A S +  Q  R +++S NIANA T+G        R 
Sbjct: 1  MLKGLYTATSAMITQQRRTEMLSNNIANANTSGYKEDQGSIRA 43


>gi|260220025|emb|CBA27150.1| hypothetical protein Csp_A00840 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 99

 Score = 41.1 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 37/127 (29%), Gaps = 31/127 (24%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + + + IA SGL      +   + N+AN  T G       ++R+     +     GGV  
Sbjct: 1   MNSISSIALSGLNAAQTSLNASAHNVANLATEG-------FKRQETV--QTAQSGGGVTT 51

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                  +    E D                           +    ++ANL   K    
Sbjct: 52  SVREASTAGNALEQD----------------------VVTQLQAKNSFIANLAVFKTQDK 89

Query: 124 MMTTTLD 130
           M    LD
Sbjct: 90  MAGALLD 96


>gi|158423059|ref|YP_001524351.1| putative flagellar basal body rod protein [Azorhizobium caulinodans
           ORS 571]
 gi|158329948|dbj|BAF87433.1| putative flagellar basal body rod protein [Azorhizobium caulinodans
           ORS 571]
          Length = 257

 Score = 41.1 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 28/53 (52%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            P    +G ++  NV++  E  D+  +   +MAN +T++   +M+   L++ R
Sbjct: 205 GPGTIRAGYLEDSNVDMATEMTDLVTSQASFMANFRTVRMGIEMLDVVLNMKR 257



 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          L     I  SGL  Q  ++  +++N ANART        P  RK  +         GV
Sbjct: 9  LADVIGIGASGLRAQVVKVATVADNTANART--------PGHRKVAAETTSAPAGAGV 58


>gi|194365679|ref|YP_002028289.1| flagellar basal body rod protein FlgF [Stenotrophomonas maltophilia
           R551-3]
 gi|194348483|gb|ACF51606.1| flagellar basal-body rod protein FlgF [Stenotrophomonas maltophilia
           R551-3]
          Length = 249

 Score = 41.1 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 78  DPGHPVANASG------IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           DP  P A A G       ++  NV+       M +  R Y   +Q IK   +   +   +
Sbjct: 185 DPLQPFAPAQGTAVHSGQLEGSNVDAAGALVQMIQLQRQYEMQVQVIKHGDENARSANSM 244

Query: 132 LR 133
           LR
Sbjct: 245 LR 246


>gi|308185346|ref|YP_003929479.1| flagellar basal body rod protein FlgB [Helicobacter pylori SJM180]
 gi|308061266|gb|ADO03162.1| flagellar basal body rod protein FlgB [Helicobacter pylori SJM180]
          Length = 140

 Score = 41.1 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 36/136 (26%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            R  +I+ NIAN  T         YR K + FE V+      +  +I  +QS+ V     
Sbjct: 19  LRQDMIASNIANVDT-------PFYRPKDLDFESVLAE----KKAEIFENQSSKVLPLAH 67

Query: 80  GHP---------------------VANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            +P                     +A   G     +V++ +ET++M + + +Y+A    +
Sbjct: 68  TNPRHLDFENSAKDGASLFFRDGHLAKNDGN----SVDLDIETSEMGKNSTMYLALSSAL 123

Query: 119 KQSHDMMTTTLDLLRD 134
           K+   M+   +D  ++
Sbjct: 124 KKYRGMINYAIDSSKN 139


>gi|307318906|ref|ZP_07598337.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti
          AK83]
 gi|306895320|gb|EFN26075.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti
          AK83]
          Length = 241

 Score = 41.1 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 10/58 (17%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           L+ Q     R+  +++NIAN+ T G       +R   + F +V+  +   +V  +  
Sbjct: 8  ALSSQMALEKRLNTLADNIANSNTVG-------FRATEVKFNQVLGDTRPTKVSYVSE 58



 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 17/92 (18%)

Query: 58  SGGVRVKKIGVDQSTFV---EEFDPGH--PVANAS------------GIVKYPNVNVLVE 100
             GV++  +G+ ++ F      +D     P A               G ++  NVN + E
Sbjct: 146 QNGVQIALLGLYEADFSKGFMRYDNSSVMPAAQPEPVVDRFDVGVMQGFLEESNVNAIQE 205

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            + +    R +      ++ S   +   ++ L
Sbjct: 206 MSQLIMITRAFDNVTALMRDSEGSLDKAIETL 237


>gi|291520179|emb|CBK75400.1| Flagellar hook-associated protein [Butyrivibrio fibrisolvens
          16/4]
          Length = 199

 Score = 41.1 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 19/79 (24%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------- 52
          M     S ++  SGL   S  +   + N++N  T G       Y R+ + +E        
Sbjct: 1  MANSFGSLYVGASGLQSASHGLNTTANNLSNINTEG-------YVREQVVYEDRNYQKIG 53

Query: 53 ----EVMHGSGGVRVKKIG 67
                 +   GV+V  I 
Sbjct: 54 TAAISTQYRGLGVQVGTIV 72


>gi|220934395|ref|YP_002513294.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995705|gb|ACL72307.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 246

 Score = 41.1 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 23/46 (50%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G+++  NVN +    +M +  R +   ++ +K + D    +  LLR
Sbjct: 199 GMLESSNVNTVEAMVNMIDLARHFEMQVKMMKTAEDNDAASASLLR 244


>gi|154687656|ref|YP_001422817.1| flagellar hook-associated protein FlgK [Bacillus
          amyloliquefaciens FZB42]
 gi|154353507|gb|ABS75586.1| FlgK [Bacillus amyloliquefaciens FZB42]
          Length = 505

 Score = 41.1 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M         A   L+ Q   +  +S N+ANA T G       Y R+ ++ +  
Sbjct: 1  MPSTFMGLETARRALSAQQTALSTVSNNVANANTEG-------YTRQRVTLQST 47


>gi|39933722|ref|NP_945998.1| flagellar hook protein FlgE [Rhodopseudomonas palustris CGA009]
 gi|39647569|emb|CAE26089.1| possible flagellar hook protein FlgE [Rhodopseudomonas palustris
          CGA009]
          Length = 421

 Score = 41.1 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 15/70 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          L  +   A S L  QS  + +IS+NIAN+ TTG       Y+  +  F +++        
Sbjct: 3  LTGALSSAISALNAQSQSLSMISDNIANSDTTG-------YKTTSAMFSQLVTASSSATS 55

Query: 56 HGSGGVRVKK 65
          + SGGV V  
Sbjct: 56 YASGGVTVAG 65


>gi|207108518|ref|ZP_03242680.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 267

 Score = 41.1 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71


>gi|317153845|ref|YP_004121893.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944096|gb|ADU63147.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 257

 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS----HDMMTT 127
             G ++  NV V+ E   M ET R +    + ++ +     +M+T 
Sbjct: 207 QQGFLEKGNVEVVTEMVQMIETQRAFDMYAKVLQGTDSLDRNMITK 252


>gi|261341493|ref|ZP_05969351.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316289|gb|EFC55227.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus
           ATCC 35316]
          Length = 243

 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           SG ++  NV+ + E       NR + A ++ +K + D+ T    LLR+
Sbjct: 195 SGHLESSNVSAISEMVASIALNRQFEAQIKMMKAAEDLATAGNRLLRN 242


>gi|163852465|ref|YP_001640508.1| flagellar basal body rod protein FlgF [Methylobacterium
          extorquens PA1]
 gi|163664070|gb|ABY31437.1| flagellar basal body rod protein [Methylobacterium extorquens
          PA1]
          Length = 246

 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 10/95 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +  +  S     +  + +I+ N+AN  TTG       ++ ++  F+E +        
Sbjct: 1  MQNALFVGVSAQTALARELDVIANNMANVSTTG-------FKARSARFQEYLMPVASA-- 51

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
                        D G P+    G V+ P+ N +
Sbjct: 52 DSFQRSDRRLSYVIDQGTPLDLTQGSVE-PDSNPM 85


>gi|188579923|ref|YP_001923368.1| flagellar basal body rod protein [Methylobacterium populi BJ001]
 gi|179343421|gb|ACB78833.1| flagellar basal body rod protein [Methylobacterium populi BJ001]
          Length = 242

 Score = 41.1 bits (96), Expect = 0.050,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 6/60 (10%)

Query: 79  PGHPVAN------ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           PG PV +        G V+  NVN ++E   +    R + +      ++ + +T  +  L
Sbjct: 179 PGRPVQDFTRIGVVQGYVEGANVNPILEMTRLIAIQRAFESAATMTSEADNTLTGAVKTL 238



 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +S ++A S       R+   + N+AN  T G       +R + +SF E++  S    V
Sbjct: 1  MQSSLYVALSSQIALEKRLTTTANNVANMATAG-------FRAEEVSFSELLARSNRGEV 53

Query: 64 KKIGVDQSTFVEEFDPG 80
            +G  ++T      P 
Sbjct: 54 AFVGPGKNTLSRAAGPT 70


>gi|220932528|ref|YP_002509436.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H
           168]
 gi|219993838|gb|ACL70441.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H
           168]
          Length = 131

 Score = 41.1 bits (96), Expect = 0.050,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 27/142 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+ +    +   GL   S R + +++NIAN  T         Y+RK + F   +     
Sbjct: 1   MDFTLDFLKL---GLDGASKRHRALADNIANVDTPN-------YKRKDVDFVSTLKSIAS 50

Query: 61  V------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                         +   G     F  E+   +      G     NV++ VE A++ + N
Sbjct: 51  QNAKLKLETTDDGHISGTGSVLKPFK-EYRITNTSYRNDGN----NVDIEVEMAELAKNN 105

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
             Y   +Q I Q   ++  T+D
Sbjct: 106 LYYNTLVQQISQKFKILNETID 127


>gi|308175374|ref|YP_003922079.1| flagellar basal-body rod protein [Bacillus amyloliquefaciens DSM 7]
 gi|307608238|emb|CBI44609.1| putative flagellar basal-body rod protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|328555348|gb|AEB25840.1| flagellar basal-body rod protein [Bacillus amyloliquefaciens TA208]
 gi|328913716|gb|AEB65312.1| putative flagellar basal-body rod protein [Bacillus
           amyloliquefaciens LL3]
          Length = 265

 Score = 41.1 bits (96), Expect = 0.050,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
             G+ +  NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 216 KQGVSELSNVDVTSTYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 264



 Score = 38.0 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A S +  Q  R +++S NIANA T+G        R 
Sbjct: 1  MLKGLYTATSAMITQQRRTEMLSNNIANANTSGYKEDQGSIRA 43


>gi|217327976|ref|ZP_03444058.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str.
          TW14588]
 gi|217318403|gb|EEC26829.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str.
          TW14588]
          Length = 372

 Score = 41.1 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +  + +I  NIAN+ T G       ++  T SF ++  GS    GV+V
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYG-------FKSGTASFADMFAGSKVGLGVKV 54

Query: 64 KKIGVD 69
            I  D
Sbjct: 55 AGITQD 60


>gi|190890357|ref|YP_001976899.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|190695636|gb|ACE89721.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 244

 Score = 41.1 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  +++ S       R+  I++N+AN  TTG       +R   + F+E++  +
Sbjct: 1  MQSGLYVSLSSQMALEKRLNTIADNMANVNTTG-------FRATEVKFDEMVAAT 48



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G ++  NVN + E   + E NR + +    ++ S D     +  L
Sbjct: 194 EQGYLENSNVNAMREITQLIEVNRSFESISSLMRDSEDSFKEAVQTL 240


>gi|148240969|ref|YP_001220470.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium
          sp. BTAi1]
 gi|146411345|gb|ABQ39798.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium
          sp. BTAi1]
          Length = 244

 Score = 41.1 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          S L     R+  ++ N+ANA TTG       +R + +SF+E +  +
Sbjct: 10 SRLIALERRLDNVANNVANADTTG-------FRARQLSFQEYLSPA 48


>gi|237799210|ref|ZP_04587671.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331022065|gb|EGI02122.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 122

 Score = 41.1 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
            SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 73  ESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 122


>gi|237752647|ref|ZP_04583127.1| biosynthetic arginine decarboxylase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376136|gb|EEO26227.1| biosynthetic arginine decarboxylase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 71

 Score = 41.1 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  +            AN+++I+ +  M+ T LD+
Sbjct: 29  ETSNVDLTTQIPQQIVAQNGVEANVKSIQTADSMLQTLLDI 69


>gi|24374756|ref|NP_718799.1| flagellar basal body rod protein FlgF [Shewanella oneidensis MR-1]
 gi|24349420|gb|AAN56243.1|AE015761_13 flagellar basal-body rod protein FlgF [Shewanella oneidensis MR-1]
          Length = 247

 Score = 41.1 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNSVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|257876010|ref|ZP_05655663.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC20]
 gi|257810176|gb|EEV38996.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC20]
          Length = 260

 Score = 41.1 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 79  PGHPVANA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             +P A      G ++   V++     D+  T R Y  N + ++ + +M +
Sbjct: 203 QTNPAAFGSVLQGQLEQSTVDLATSMTDLLTTQRAYGLNTKAMQTADEMWS 253



 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 7/55 (12%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            I+ SGL      +   + NIAN  T G       Y+ +T  F+ +M  + G  
Sbjct: 7  LGISRSGLNHLQTNLDTTANNIANVNTNG-------YQAQTTHFQALMENAIGAE 54


>gi|153011530|ref|YP_001372744.1| flagellar basal body rod protein FlgF [Ochrobactrum anthropi ATCC
           49188]
 gi|151563418|gb|ABS16915.1| flagellar basal body rod protein [Ochrobactrum anthropi ATCC 49188]
          Length = 243

 Score = 41.1 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 6/60 (10%)

Query: 79  PGHPVANAS------GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           P  PVA+ +      G+++  NV+ + E   +   +R +      + Q    ++  +  L
Sbjct: 179 PAQPVADDNSVGVVQGMIEGSNVDAMTEMTRLISVSRAFEQVNNLLSQQESTVSEAIKTL 238


>gi|327193031|gb|EGE59943.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512]
          Length = 244

 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  +++ S       R+  I++N+AN  TTG       +R   + F+E++  +
Sbjct: 1  MQSGLYVSLSSQMALEKRLNTIADNMANVNTTG-------FRATEVKFDEMVAAT 48



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G ++  NVN + E   + E NR + +    ++ S D     +  L
Sbjct: 194 EQGYLENSNVNAMREITQLIEVNRSFESISSLMRDSEDSFKEAVQTL 240


>gi|257866397|ref|ZP_05646050.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC30]
 gi|257873087|ref|ZP_05652740.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC10]
 gi|257800355|gb|EEV29383.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC30]
 gi|257807251|gb|EEV36073.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC10]
          Length = 260

 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 79  PGHPVANA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             +P A      G ++   V++     D+  T R Y  N + ++ + +M +
Sbjct: 203 QTNPAAFGSVLQGQLEQSTVDLATSMTDLLTTQRAYGLNTKAMQTADEMWS 253



 Score = 41.1 bits (96), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 7/55 (12%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            I+ SGL      +   + NIAN  T G       Y+ +T  F+ +M  + G  
Sbjct: 7  LGISRSGLNHLQTNLDTTANNIANVNTNG-------YQAQTTHFQALMENAIGAE 54


>gi|254419855|ref|ZP_05033579.1| conserved domain protein [Brevundimonas sp. BAL3]
 gi|196186032|gb|EDX81008.1| conserved domain protein [Brevundimonas sp. BAL3]
          Length = 246

 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN L E  ++ E +R Y +  + I+ ++D+    ++
Sbjct: 197 QGSLEASNVNSLTEITNLIEISRAYESITRMIENTNDLSRRAVE 240


>gi|150395482|ref|YP_001325949.1| flagellar basal body rod protein FlgB [Sinorhizobium medicae
           WSM419]
 gi|150026997|gb|ABR59114.1| flagellar basal body rod protein [Sinorhizobium medicae WSM419]
          Length = 126

 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 43/124 (34%), Gaps = 22/124 (17%)

Query: 17  VQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVRVKKIGV----- 68
            Q  S R  +++ NIANA T         Y+ + +  FE V+  + GV++          
Sbjct: 14  AQWLSVRQNVVAGNIANANTPH-------YKARDVQPFESVLQNT-GVQMAATHRAHFTE 65

Query: 69  --DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D +   E           SG      V +  E        R Y  N   +K  H M+ 
Sbjct: 66  SADAAQVTEVSALDDVAVQQSGN----TVALEEELMKTGAIKRDYELNAGLVKSFHRMIL 121

Query: 127 TTLD 130
            T+ 
Sbjct: 122 MTVR 125


>gi|291288372|ref|YP_003505188.1| flagellar hook-associated protein FlgK [Denitrovibrio acetiphilus
          DSM 12809]
 gi|290885532|gb|ADD69232.1| flagellar hook-associated protein FlgK [Denitrovibrio acetiphilus
          DSM 12809]
          Length = 584

 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 26/78 (33%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L+       SGL    A + +   NI+N  T G       Y R+ +  E        
Sbjct: 1  MSNLMHIFSTGVSGLFASQAGIDVTGNNISNVNTEG-------YSRQRVVLETANPEKNS 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
            V   GV   T    +D
Sbjct: 54 QGVFGRGVSVETVERIYD 71


>gi|209547922|ref|YP_002279839.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum
          bv. trifolii WSM2304]
 gi|209533678|gb|ACI53613.1| flagellar basal body rod protein [Rhizobium leguminosarum bv.
          trifolii WSM2304]
          Length = 244

 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  +++ S       R+  I++N+AN  TTG       +R   + F+E++  +
Sbjct: 1  MQSGLYVSLSSQMALEKRLNTIADNMANVNTTG-------FRATEVKFDEMVAAT 48



 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G ++  NVN + E   + E NR + +    ++ S D     +  L
Sbjct: 194 EQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQTL 240


>gi|88704305|ref|ZP_01102019.1| flagellar basal-body rod protein FlgF [Congregibacter litoralis
           KT71]
 gi|88701356|gb|EAQ98461.1| flagellar basal-body rod protein FlgF [Congregibacter litoralis
           KT71]
          Length = 251

 Score = 41.1 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 85  NASGIVKY-------PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            A G V+         NVN +     M E +R +   ++ +K + D+ T++  L+R
Sbjct: 193 PADGNVRLVSGALESSNVNPVTAMVRMIELSRQFEHYVKLMKTAEDVDTSSASLMR 248


>gi|220904842|ref|YP_002480154.1| flagellar basal body rod protein FlgB [Desulfovibrio
          desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219869141|gb|ACL49476.1| flagellar basal-body rod protein FlgB [Desulfovibrio
          desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 137

 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 8/61 (13%)

Query: 1  MDYLIAS-AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M  L +S   +  + + +Q  R  II+ N+AN  T         Y+ + +SFE+ +  + 
Sbjct: 1  MKSLFSSQIGLVGTVMNMQLDRQNIIAGNLANIDTPN-------YKPRELSFEKELQTAL 53

Query: 60 G 60
          G
Sbjct: 54 G 54


>gi|119947176|ref|YP_944856.1| flagellar basal-body rod protein FlgF [Psychromonas ingrahamii 37]
 gi|119865780|gb|ABM05257.1| flagellar basal-body rod protein FlgF [Psychromonas ingrahamii 37]
          Length = 243

 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 18/37 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            ++  NV+V+ E   +    R Y   ++ +K +  ++
Sbjct: 196 YLESANVSVISEMIGVMTATRQYEMQVKMMKAADQLI 232


>gi|28275264|ref|NP_783519.1| flagellar hook-associated protein [Shewanella oneidensis MR-1]
          Length = 386

 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    +++ + S NIANA T G       Y R+  +   +     G      G
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTVG-------YHRQVATQTTLDSQRLGSSFYGTG 58

Query: 68 VDQSTFVEEFD 78
             S     ++
Sbjct: 59 TYVSDVKRIYN 69


>gi|119775449|ref|YP_928189.1| flagellar basal body rod protein FlgF [Shewanella amazonensis SB2B]
 gi|119767949|gb|ABM00520.1| flagellar basal-body rod protein FlgF [Shewanella amazonensis SB2B]
          Length = 247

 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 17/34 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           V+  NVN + E   + +  R +   ++ +K + +
Sbjct: 202 VEGSNVNPVEEMVALIDIQRQFELQVKMMKTAEE 235


>gi|332187895|ref|ZP_08389628.1| flagellar basal-body rod protein FlgB [Sphingomonas sp. S17]
 gi|332012056|gb|EGI54128.1| flagellar basal-body rod protein FlgB [Sphingomonas sp. S17]
          Length = 115

 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 7/53 (13%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            I  + L V+  RM +++ NIANA     TPG   ++ + I F+  +    G
Sbjct: 7  FGIHGAALEVRGQRMGVLASNIANA----STPG---FKARDIDFKAALAAVEG 52


>gi|313200562|ref|YP_004039220.1| flagellar basal-body rod protein flgf [Methylovorus sp. MP688]
 gi|312439878|gb|ADQ83984.1| flagellar basal-body rod protein FlgF [Methylovorus sp. MP688]
          Length = 246

 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 12/82 (14%)

Query: 62  RVKKIGVDQSTFVEEFD---------PGHPVAN---ASGIVKYPNVNVLVETADMRETNR 109
           R+K +  D+ST V   D         P    AN   ASG ++  NVNV+    +M    R
Sbjct: 161 RIKLVNPDESTLVRGTDGLFSTQNGQPAQADANIQVASGALEGSNVNVVDAMVNMISLAR 220

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            +   ++ ++ + +       L
Sbjct: 221 QFETQMKLLENAENNANKASQL 242


>gi|253998487|ref|YP_003050550.1| flagellar basal-body rod protein FlgF [Methylovorus sp. SIP3-4]
 gi|253985166|gb|ACT50023.1| flagellar basal-body rod protein FlgF [Methylovorus sp. SIP3-4]
          Length = 246

 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 12/82 (14%)

Query: 62  RVKKIGVDQSTFVEEFD---------PGHPVAN---ASGIVKYPNVNVLVETADMRETNR 109
           R+K +  D+ST V   D         P    AN   ASG ++  NVNV+    +M    R
Sbjct: 161 RIKLVNPDESTLVRGTDGLFSTQNGQPAQADANIQVASGALEGSNVNVVDAMVNMISLAR 220

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            +   ++ ++ + +       L
Sbjct: 221 QFETQMKLLENAENNANKASQL 242


>gi|312884828|ref|ZP_07744520.1| flagellar hook-associated protein FlgK [Vibrio caribbenthicus
          ATCC BAA-2122]
 gi|309367480|gb|EFP95040.1| flagellar hook-associated protein FlgK [Vibrio caribbenthicus
          ATCC BAA-2122]
          Length = 457

 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 14/75 (18%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MHGSGGV 61
          +I  +GL      + + ++N+AN  T G       Y R+      V       +    GV
Sbjct: 5  NIGLTGLNASRVALDVTAQNVANINTPG-------YSRQQALMASVGGPKHDKLSAGAGV 57

Query: 62 RVKKIGVDQSTFVEE 76
           V  I      F+ +
Sbjct: 58 EVPSIRRISDEFLVK 72


>gi|218673219|ref|ZP_03522888.1| flagellar basal body rod protein FlgF [Rhizobium etli GR56]
          Length = 244

 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  +++ S       R+  I++N+AN  TTG       +R   + F+E++  +
Sbjct: 1  MQSGLYVSLSSQMALEKRLNTIADNMANVNTTG-------FRATEVKFDEMVAAT 48



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G ++  NVN + E   + E NR + +    ++ S D     +  L
Sbjct: 194 EQGYLENSNVNAMREITQLIEVNRAFESISSLMRDSEDSFKEAVQTL 240


>gi|218461633|ref|ZP_03501724.1| flagellar basal body rod protein FlgF [Rhizobium etli Kim 5]
          Length = 244

 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  +++ S       R+  I++N+AN  TTG       +R   + F+E++  +
Sbjct: 1  MQSGLYVSLSSQMALEKRLNTIADNMANVNTTG-------FRATEVKFDEMVAAT 48



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G ++  NVN + E   + E NR + +    ++ S D     +  L
Sbjct: 194 EQGYLENSNVNAMREITQLIEVNRAFESISSLMRDSEDSFKEAVQTL 240


>gi|194016593|ref|ZP_03055207.1| flagellar hook-basal body complex protein FlhO [Bacillus pumilus
          ATCC 7061]
 gi|194012066|gb|EDW21634.1| flagellar hook-basal body complex protein FlhO [Bacillus pumilus
          ATCC 7061]
          Length = 279

 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A S +  Q  R +++S NIANA T G        R 
Sbjct: 1  MLKGLYTATSAMIAQERRTEMLSNNIANANTPGYKADEGTMRA 43



 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
           + G+ +  NV+V     +M    R +  N + ++     +     ++ R
Sbjct: 229 SQGVSELSNVDVTKSYTEMTTAYRAFETNQKVVQAYDKSLEKAVNEIGR 277


>gi|115523523|ref|YP_780434.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          BisA53]
 gi|115517470|gb|ABJ05454.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris BisA53]
          Length = 629

 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 9/65 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGV 61
          L  +  IA +GL    A M ++S N+ANA T G       Y RKTI       GS   GV
Sbjct: 3  LGDALSIAMAGLRANQASMSLVSSNVANAETPG-------YVRKTIDQVTTNSGSVGSGV 55

Query: 62 RVKKI 66
          RV  +
Sbjct: 56 RVYGV 60



 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E A +      Y AN + +   +DM  T + 
Sbjct: 590 SGVNMDEEMAHLLALQNAYSANARVMSTVNDMYKTLMQ 627


>gi|325288804|ref|YP_004264985.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324964205|gb|ADY54984.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 256

 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 18/44 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G+++  N +     ++M E  R Y   +   K    M+   + L
Sbjct: 211 GMLERSNTDTAKAMSNMIEAQRAYQIEIGITKDQDQMIAEAIAL 254



 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTG 36
            I+   + +  +R+ ++  N+ANA TT 
Sbjct: 1  MRISAEYMNLLQSRLDMVGNNLANANTTA 29


>gi|15612532|ref|NP_224185.1| flagellar basal body rod protein FlgB [Helicobacter pylori J99]
 gi|4156088|gb|AAD07041.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99]
          Length = 140

 Score = 41.1 bits (96), Expect = 0.054,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 36/136 (26%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            R  +I+ NIAN  T         YR K + FE V+      +  +I  +QS  V     
Sbjct: 19  LRQDMIASNIANVDT-------PFYRPKDLDFESVLAE----KKAEIFENQSGKVLPLAH 67

Query: 80  GHP---------------------VANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            +P                     +A   G     +V++ +ET++M + + +Y+A    +
Sbjct: 68  TNPRHLDFENSTKNGASLFFRDGHLAKNDGN----SVDLDIETSEMGKNSTMYLALSSAL 123

Query: 119 KQSHDMMTTTLDLLRD 134
           K+   M+   +D  ++
Sbjct: 124 KKYRGMINYAIDSSKN 139


>gi|330830306|ref|YP_004393258.1| flagellar basal-body rod protein FlgB [Aeromonas veronii B565]
 gi|328805442|gb|AEB50641.1| Flagellar basal-body rod protein FlgB [Aeromonas veronii B565]
          Length = 132

 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 49/123 (39%), Gaps = 20/123 (16%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD------ 69
           +V++ R +++S NIANA T G       ++ + I+F + +  +   +   +         
Sbjct: 17  SVRAKRAEVLSSNIANADTPG-------FKARDINFAQALQEAQSHQGFGLATTSEKHFA 69

Query: 70  ---QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
               +    ++   +P+   +G      V+V  E ++    +  Y  +L+ +      + 
Sbjct: 70  LNMDAPGTVQY--RNPLQPDTG--DGNTVDVQQERSEFLRNSLEYQTSLEFMNSKISGLL 125

Query: 127 TTL 129
             L
Sbjct: 126 KAL 128


>gi|326386930|ref|ZP_08208544.1| hypothetical protein Y88_1568 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208610|gb|EGD59413.1| hypothetical protein Y88_1568 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 270

 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NV++  E  ++    + + AN + I  +  +    ++L
Sbjct: 224 SGSLEASNVDLSSEMVNLITAQQYFQANAKAIDANTTINDAIINL 268


>gi|315125990|ref|YP_004067993.1| lateral flagellar hook-associated protein [Pseudoalteromonas sp.
           SM9913]
 gi|315014504|gb|ADT67842.1| lateral flagellar hook-associated protein [Pseudoalteromonas sp.
           SM9913]
          Length = 435

 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           Y  VN+  E A++    ++Y AN + I  +  M  + L +
Sbjct: 395 YSGVNLDEEAANLMHFQQMYSANAKVISTADQMFKSLLQM 434



 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  + A SGL   +  + +  +N+ANA         + Y R+   F+      GGV V 
Sbjct: 1  MSMLNNALSGLNAANIALTVSGQNVANA-------AVEGYSRQQAQFKTSNVYLGGVEVA 53

Query: 65 KIGVDQSTF 73
           +      F
Sbjct: 54 SVDRVVDAF 62


>gi|322421655|ref|YP_004200878.1| flagellar hook-associated protein FlgK [Geobacter sp. M18]
 gi|320128042|gb|ADW15602.1| flagellar hook-associated protein FlgK [Geobacter sp. M18]
          Length = 481

 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 7/73 (9%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
              IA+SG+      +++  ENI+N  T G       Y R+ +  E     +       
Sbjct: 5  TIFDIASSGITANRLAIEVTGENISNVNTEG-------YSRQRVVMENKPVSTANGFALG 57

Query: 66 IGVDQSTFVEEFD 78
           GV+ +     +D
Sbjct: 58 TGVEIAAVQRSYD 70


>gi|209884527|ref|YP_002288384.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5]
 gi|209872723|gb|ACI92519.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5]
          Length = 255

 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
             G ++  NVN + E + M E  R Y      ++Q  D+    +  L D
Sbjct: 204 KQGFIERSNVNAIAEMSRMLEITRTYQNISNLMQQQADLRKNAIQTLAD 252


>gi|90577350|ref|ZP_01233161.1| putative flagellar hook-associated protein [Vibrio angustum S14]
 gi|90440436|gb|EAS65616.1| putative flagellar hook-associated protein [Vibrio angustum S14]
          Length = 455

 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 5/80 (6%)

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
             M G   +  ++  VDQ      F   +   +         VN   E A++      Y 
Sbjct: 381 ASMVGKTAIETRQAAVDQKAAETLFSQANAARDN-----LSAVNSDEEAANLMTFTNAYQ 435

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++ I  ++++  + L LL
Sbjct: 436 ANMKVISTANELFDSVLRLL 455



 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 12/69 (17%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-----VMHGSG 59
          +   +I  +GL      + + + NIAN  T G       + R+           ++    
Sbjct: 1  MNMINIGLTGLNANKTALDVTAHNIANVNTPG-------FSRQQAMMNALAGNDILSAGS 53

Query: 60 GVRVKKIGV 68
          GV +  I  
Sbjct: 54 GVEIASIRR 62


>gi|327399356|ref|YP_004340225.1| flagellar basal-body rod protein FlgB [Hippea maritima DSM 10411]
 gi|327181985|gb|AEA34166.1| flagellar basal-body rod protein FlgB [Hippea maritima DSM 10411]
          Length = 132

 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          GL V + R  +I+ NIANA T         Y+ K I F +++ 
Sbjct: 15 GLDVANLRQDLIASNIANADTPN-------YKAKHIPFNDILK 50


>gi|330811235|ref|YP_004355697.1| flagellar hook protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379343|gb|AEA70693.1| Putative flagellar hook protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 432

 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVN+  E  ++ +    Y AN +TI     +M T + +
Sbjct: 393 SNVNLTNELVELIKAQSNYQANAKTISTQSTIMQTIIQM 431



 Score = 39.1 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 17/70 (24%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------- 58
          S +I  SGL   + ++ +   NIAN  TTG       ++     FE+V   +        
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVATTG-------FKSSRAEFEDVYSATKLGSGSKT 54

Query: 59 --GGVRVKKI 66
             GVR+  +
Sbjct: 55 VGNGVRLANV 64


>gi|237752020|ref|ZP_04582500.1| flagellar hook protein flge [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376587|gb|EEO26678.1| flagellar hook protein flge [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 764

 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +++  NV+      D+    R Y  + ++I  +  +M   + L R
Sbjct: 720 MLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQLKR 764


>gi|167034944|ref|YP_001670175.1| flagellar hook protein FlgE [Pseudomonas putida GB-1]
 gi|166861432|gb|ABY99839.1| flagellar basal body FlaE domain protein [Pseudomonas putida GB-1]
          Length = 440

 Score = 41.1 bits (96), Expect = 0.056,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E  ++ +    Y AN +TI     +M T + +
Sbjct: 401 SNVDLTGELVNLIKAQSNYQANAKTISTESTIMQTIIQM 439



 Score = 37.6 bits (87), Expect = 0.63,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKALNVTGNNIANVATTG 31


>gi|83747648|ref|ZP_00944684.1| FlgK [Ralstonia solanacearum UW551]
 gi|207739731|ref|YP_002258124.1| flagellar hook-associated protein 1 [Ralstonia solanacearum
          IPO1609]
 gi|83725700|gb|EAP72842.1| FlgK [Ralstonia solanacearum UW551]
 gi|206593113|emb|CAQ60019.1| flagellar hook-associated protein 1 [Ralstonia solanacearum
          IPO1609]
          Length = 642

 Score = 41.1 bits (96), Expect = 0.056,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +  +IA +GL      +Q+   NIANA T G       Y R+     E +  + G     
Sbjct: 4  SLLNIAATGLRAADVNLQVTGNNIANASTAG-------YSRQEAVQTENIPMATGAGYLG 56

Query: 66 IGVDQSTFVEEFDP 79
           GV+ +T    +D 
Sbjct: 57 QGVNVTTVKRIYDQ 70


>gi|300114793|ref|YP_003761368.1| flagellar hook-associated protein FlgK [Nitrosococcus watsonii
          C-113]
 gi|299540730|gb|ADJ29047.1| flagellar hook-associated protein FlgK [Nitrosococcus watsonii
          C-113]
          Length = 647

 Score = 41.1 bits (96), Expect = 0.056,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 9/72 (12%)

Query: 8  AHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
            I  SGL A Q A +   S NIAN  T G       + R+       +    G      
Sbjct: 7  LGIGASGLLAAQRA-LATTSHNIANVNTPG-------FSRQRAELAARLPEFTGQGFIGT 58

Query: 67 GVDQSTFVEEFD 78
          GVD +T    +D
Sbjct: 59 GVDVTTVRRAYD 70



 Score = 36.8 bits (85), Expect = 1.00,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 5/70 (7%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G R ++   +Q T     D    VA   G      VN+  E A++    + + A  + I 
Sbjct: 578 GARTRQAEANQDTHKTLLDQA--VAEKEG---VSGVNLEEEAANLIRFQQAFQAAARVIS 632

Query: 120 QSHDMMTTTL 129
            +  M  T L
Sbjct: 633 TADTMFQTLL 642


>gi|225863602|ref|YP_002748980.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB102]
 gi|229183935|ref|ZP_04311151.1| Flagellar basal-body rod protein [Bacillus cereus BGSC 6E1]
 gi|225786134|gb|ACO26351.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB102]
 gi|228599587|gb|EEK57191.1| Flagellar basal-body rod protein [Bacillus cereus BGSC 6E1]
          Length = 135

 Score = 41.1 bits (96), Expect = 0.056,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 31/125 (24%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG-- 80
             +S NIANA T G       Y+ + ++F E ++ S  +        +S     +     
Sbjct: 20  NTVSSNIANANTPG-------YKAQDVTFAEQINISSALYKNNAADLKSNPDL-YQTNEM 71

Query: 81  --------HPVA---------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                   +  A         N  G     +V+V  E  D+ + N+LY  ++  I   + 
Sbjct: 72  HLPTVNMKNTYAKIQTKSMQTNKDGN----SVDVTTEMLDLMKANQLYGISINAINTQYA 127

Query: 124 MMTTT 128
           +    
Sbjct: 128 INQAA 132


>gi|15964412|ref|NP_384765.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti 1021]
 gi|307311554|ref|ZP_07591195.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti
           BL225C]
 gi|307318909|ref|ZP_07598340.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti AK83]
 gi|3894106|emb|CAA11959.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
 gi|15073589|emb|CAC45231.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
 gi|306895323|gb|EFN26078.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti AK83]
 gi|306899571|gb|EFN30200.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti
           BL225C]
          Length = 126

 Score = 41.1 bits (96), Expect = 0.056,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 18/122 (14%)

Query: 17  VQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVRVKKIGVDQSTF 73
            Q  + R  +++ NIANA T         YR K +  FE V+  +G   ++     ++ F
Sbjct: 14  AQWLTVRQNVVAGNIANANTPH-------YRAKDVQPFESVLQNTG---IQMAATHRAHF 63

Query: 74  VEEFDPGHP---VANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            E  +  H     A     V+     V +  E        R Y  N   +K  H M+  T
Sbjct: 64  TESPEAAHVTEVSALDDVAVQQSGNTVALEEELMKTGAIKRDYELNAGLVKSFHRMILMT 123

Query: 129 LD 130
           + 
Sbjct: 124 VR 125


>gi|332533169|ref|ZP_08409038.1| flagellar hook-associated protein FlgK [Pseudoalteromonas
          haloplanktis ANT/505]
 gi|332037451|gb|EGI73905.1| flagellar hook-associated protein FlgK [Pseudoalteromonas
          haloplanktis ANT/505]
          Length = 667

 Score = 41.1 bits (96), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
              +IA+SG+   S  +Q  S+NIAN  T G       Y R+   F  ++    G
Sbjct: 3  FNLLNIASSGVRASSELLQTTSKNIANVNTEG-------YVRERTEFTTMVDNQVG 51


>gi|207728352|ref|YP_002256746.1| flagellar hook-associated protein 1 [Ralstonia solanacearum
          MolK2]
 gi|206591598|emb|CAQ57210.1| flagellar hook-associated protein 1 [Ralstonia solanacearum
          MolK2]
          Length = 642

 Score = 41.1 bits (96), Expect = 0.057,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +  +IA +GL      +Q+   NIANA T G       Y R+     E +  + G     
Sbjct: 4  SLLNIAATGLRAADVNLQVTGNNIANASTAG-------YSRQEAVQTENIPMATGAGYLG 56

Query: 66 IGVDQSTFVEEFDP 79
           GV+ +T    +D 
Sbjct: 57 QGVNVTTVKRIYDQ 70


>gi|171320708|ref|ZP_02909721.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
 gi|171094035|gb|EDT39133.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
          Length = 388

 Score = 41.1 bits (96), Expect = 0.057,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG V+  NV++  E   +    R + A  Q I  S++M+     +
Sbjct: 340 SGAVEASNVDLSGEFGQLILIQRGFQAASQVISTSNEMIMQLFQM 384



 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 7/59 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S +I  SGLA  S  +Q I +N+AN  T G       ++     F+++  G    R
Sbjct: 1  MLDSIYIGMSGLAAYSKGLQTIGDNVANLNTPG-------FKSSAPRFQDLCDGRPTAR 52


>gi|71906392|ref|YP_283979.1| hypothetical protein Daro_0753 [Dechloromonas aromatica RCB]
 gi|71846013|gb|AAZ45509.1| Protein of unknown function DUF1078 [Dechloromonas aromatica RCB]
          Length = 247

 Score = 41.1 bits (96), Expect = 0.057,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 78  DPGHPVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            P    AN   A+G ++  NVNV     ++   +R +   ++ ++ +         LL
Sbjct: 186 QPAVADANVKLAAGTLEGSNVNVTDAMVNLISLSRQFEMQIKLLQTADTNAQRADQLL 243


>gi|257871308|ref|ZP_05650961.1| flagellar basal-body rod protein flgG [Enterococcus gallinarum
          EG2]
 gi|257805472|gb|EEV34294.1| flagellar basal-body rod protein flgG [Enterococcus gallinarum
          EG2]
          Length = 260

 Score = 41.1 bits (96), Expect = 0.057,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 7/55 (12%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            I+ SGL      +   + NIAN  T G       Y+ +T  F+ +M  + G  
Sbjct: 7  LGISRSGLNHLQTNLDTTANNIANVNTNG-------YQAQTTHFQALMENAIGAE 54



 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 3/51 (5%)

Query: 79  PGHPVANA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             +P A      G +    V++     D+  T R Y  N + ++ + +M +
Sbjct: 203 QTNPAAFGSVLQGQLVQSTVDLATSMTDLLTTQRAYGLNTKAMQTADEMWS 253


>gi|170288661|ref|YP_001738899.1| flagellar hook-associated protein FlgK [Thermotoga sp. RQ2]
 gi|170176164|gb|ACB09216.1| flagellar hook-associated protein FlgK [Thermotoga sp. RQ2]
          Length = 858

 Score = 41.1 bits (96), Expect = 0.057,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 21/79 (26%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
          +    + A +G+      M ++  NIANA     TPG   Y R+    E           
Sbjct: 6  MFGILNTALTGIHAHKLAMNVVGHNIANA----STPG---YSRQRPVIEANPPIPLTTLT 58

Query: 55 -----MHGSGGVRVKKIGV 68
               +    G +VK I  
Sbjct: 59 QPSFPLQMGTGAKVKTIVR 77



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V++  E A+M E    + A  + I     M+ T +++
Sbjct: 820 VSLDEEMANMIEYQHAFSAAAKVITAVDQMIQTVINM 856


>gi|86356306|ref|YP_468198.1| flagellar basal body rod protein FlgF [Rhizobium etli CFN 42]
 gi|86280408|gb|ABC89471.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
          Length = 244

 Score = 41.1 bits (96), Expect = 0.058,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  +++ S       R+  I++N+AN  TTG       +R   + F+E++  +
Sbjct: 1  MQSGLYVSLSSQMALEKRLNTIADNMANVNTTG-------FRATEVKFDEMVAAT 48



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G ++  NVN + E   + E NR + +    ++ S D     +  L
Sbjct: 194 EQGYLENSNVNAMREITQLIEVNRAFESISSLMRDSEDSFKQAVQTL 240


>gi|210135277|ref|YP_002301716.1| flagellar hook-associated protein FlgK [Helicobacter pylori P12]
 gi|210133245|gb|ACJ08236.1| flagellar hook-associated protein 1 [Helicobacter pylori P12]
          Length = 606

 Score = 41.1 bits (96), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMLNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|329402361|gb|AEB91479.1| hook-associated protein 1 [Helicobacter pylori SS1]
          Length = 606

 Score = 41.1 bits (96), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71


>gi|325567512|ref|ZP_08144179.1| hypothetical protein HMPREF9087_0468 [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158945|gb|EGC71091.1| hypothetical protein HMPREF9087_0468 [Enterococcus casseliflavus
           ATCC 12755]
          Length = 260

 Score = 41.1 bits (96), Expect = 0.059,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 79  PGHPVANA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             +P A      G ++   V++     D+  T R Y  N + ++ + +M +
Sbjct: 203 QTNPAAFGSVLQGQLEQSTVDLATSMTDLLTTQRAYGLNTKAMQTADEMWS 253



 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 7/55 (12%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            I+ SGL      +   + NIAN  T G       Y+ +T  F+ +M  + G  
Sbjct: 7  LGISRSGLNHLQTNLDTTANNIANVNTNG-------YQAQTTHFQALMENAIGAE 54


>gi|308184859|ref|YP_003928992.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          SJM180]
 gi|308060779|gb|ADO02675.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          SJM180]
          Length = 606

 Score = 41.1 bits (96), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMLNLIKFQSGYAANAKVISAIDRMIDTLLGI 604


>gi|229017031|ref|ZP_04173951.1| Flagellar basal-body rod protein [Bacillus cereus AH1273]
 gi|229023212|ref|ZP_04179723.1| Flagellar basal-body rod protein [Bacillus cereus AH1272]
 gi|228738137|gb|EEL88622.1| Flagellar basal-body rod protein [Bacillus cereus AH1272]
 gi|228744302|gb|EEL94384.1| Flagellar basal-body rod protein [Bacillus cereus AH1273]
          Length = 177

 Score = 41.1 bits (96), Expect = 0.059,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 29/124 (23%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV--RVKKIGVDQSTFVEEFDPG 80
             +S NIANA T G       Y+ + ++F E M+ +  +  +        S   +  +  
Sbjct: 62  NTVSSNIANANTPG-------YKAQGVTFAEQMNMNNPLFKKNAADLKSNSDLYQTNEMH 114

Query: 81  HPVA----------------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            P A                N  G     +V+V  E  D+ +TN+LY  ++  I   + +
Sbjct: 115 LPTANMKNTYAKIQTKLMQTNKDGN----SVDVTTEMLDLMKTNQLYGISINAINTQYAI 170

Query: 125 MTTT 128
               
Sbjct: 171 NQAA 174


>gi|300696919|ref|YP_003747580.1| flagellar hook-filament junction protein 1 [Ralstonia
          solanacearum CFBP2957]
 gi|299073643|emb|CBJ53163.1| flagellar hook-filament junction protein 1 [Ralstonia
          solanacearum CFBP2957]
          Length = 642

 Score = 41.1 bits (96), Expect = 0.060,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +  +IA +GL      +Q+   NIANA T G       Y R+     E +  + G     
Sbjct: 4  SLLNIAATGLRAADVNLQVTGNNIANASTAG-------YSRQEAVQTENIPMATGAGYLG 56

Query: 66 IGVDQSTFVEEFDP 79
           GV+ +T    +D 
Sbjct: 57 QGVNVTTVKRIYDQ 70


>gi|294140181|ref|YP_003556159.1| flagellar basal-body rod protein FlgB [Shewanella violacea DSS12]
 gi|293326650|dbj|BAJ01381.1| flagellar basal-body rod protein FlgB [Shewanella violacea DSS12]
          Length = 132

 Score = 41.1 bits (96), Expect = 0.060,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 9/46 (19%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          G+  Q A  ++I+ NIANA T         Y+ + ++F++ +  + 
Sbjct: 17 GIRAQRA--EVIASNIANADTPH-------YKARDVNFDKALQAAS 53


>gi|317014505|gb|ADU81941.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          Gambia94/24]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|308183223|ref|YP_003927350.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          PeCan4]
 gi|308065408|gb|ADO07300.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          PeCan4]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|254779670|ref|YP_003057776.1| flagellar hook-associated protein FlgK [Helicobacter pylori B38]
 gi|254001582|emb|CAX29629.1| Flagellar hook-associated protein 1 (HAP 1) (FlgK) [Helicobacter
          pylori B38]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|317012896|gb|ADU83504.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          Lithuania75]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+   L +
Sbjct: 566 SQVSVDEEMLNLIKFQSGYAANAKVITAIDRMIDALLGI 604


>gi|297380296|gb|ADI35183.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          v225d]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNASYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQEAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD +      D
Sbjct: 54 TKNVSMGVDVTAIERVHD 71



 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLLGI 604


>gi|241203100|ref|YP_002974196.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum
          bv. trifolii WSM1325]
 gi|240856990|gb|ACS54657.1| flagellar basal-body rod protein FlgF [Rhizobium leguminosarum
          bv. trifolii WSM1325]
          Length = 244

 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  +++ S       R+  I++N+AN  TTG       +R   + F+E++  +
Sbjct: 1  MQSGLYVSLSSQMALEKRLNTIADNMANVNTTG-------FRATEVKFDEMVAAT 48



 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G ++  NVN + E   + E NR + +    ++ S D     +  L
Sbjct: 194 EQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQTL 240


>gi|15645733|ref|NP_207910.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          26695]
 gi|2314271|gb|AAD08163.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Helicobacter
          pylori 26695]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|229172400|ref|ZP_04299959.1| Flagellar hook protein FlgE [Bacillus cereus MM3]
 gi|228610871|gb|EEK68134.1| Flagellar hook protein FlgE [Bacillus cereus MM3]
          Length = 441

 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 84  ANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 387 ENGAGNVRGGAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 441



 Score = 40.7 bits (95), Expect = 0.072,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I + + + +G++     + + S NIANA+T G       Y+++   F+++++ +
Sbjct: 1  MIKALYTSITGMSATQNALSVTSNNIANAQTAG-------YKKQKAIFDDLLYNN 48


>gi|108563482|ref|YP_627798.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          HPAG1]
 gi|107837255|gb|ABF85124.1| flagellar hook-associated protein 1 [Helicobacter pylori HPAG1]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|329297213|ref|ZP_08254549.1| flagellar basal body rod protein FlgB [Plautia stali symbiont]
          Length = 137

 Score = 40.7 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 45/133 (33%), Gaps = 33/133 (24%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG------------VR 62
           L  Q    +I++ NIANA T G       Y+ + I F   +  +              V 
Sbjct: 18  LRAQRQ--EILASNIANADTPG-------YQARDIDFASQLSKAMQNGRAEGSSLALNVT 68

Query: 63  VKKIGVDQSTFVEEFD-----PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             +    Q+      D     P  P A+ +       V++  E     + +  Y  +L  
Sbjct: 69  SSRHIEAQTNSQPALDLLYRIPDQPAADGN------TVDMDRERTQFADNSLKYQTDLTL 122

Query: 118 I-KQSHDMMTTTL 129
           I  Q   MM+  L
Sbjct: 123 ISSQIKGMMSVLL 135


>gi|146281772|ref|YP_001171925.1| flagellar basal-body rod protein FlgF [Pseudomonas stutzeri A1501]
 gi|145569977|gb|ABP79083.1| flagellar basal-body rod protein FlgF [Pseudomonas stutzeri A1501]
          Length = 203

 Score = 40.7 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 8/56 (14%)

Query: 84  ANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD---MMTTTLDL 131
           A+A+     G ++  NVN + E   M   +R +  +++ ++ + D    M   L +
Sbjct: 147 ADANVRVTSGFLEASNVNAVAEMTSMLALSRQFELHVKMMRTAEDDAAAMARVLQI 202


>gi|320530444|ref|ZP_08031502.1| putative flagellar basal body rod protein FlgG [Selenomonas
           artemidis F0399]
 gi|320137277|gb|EFW29201.1| putative flagellar basal body rod protein FlgG [Selenomonas
           artemidis F0399]
          Length = 266

 Score = 40.7 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G+++  N +++ E  ++    R+Y A  + ++    ++   + D+ R
Sbjct: 216 EQGLLEMSNTSIVTEMVELINNYRVYEAGSRAVQTQDSLLDKAVNDVGR 264



 Score = 37.6 bits (87), Expect = 0.65,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +    +IA SG+  ++    +I+ N+ANA  TG
Sbjct: 1  MWRGLYIAASGMITETKHTDMIANNLANASNTG 33


>gi|281412143|ref|YP_003346222.1| flagellar hook-associated protein FlgK [Thermotoga naphthophila
          RKU-10]
 gi|281373246|gb|ADA66808.1| flagellar hook-associated protein FlgK [Thermotoga naphthophila
          RKU-10]
          Length = 858

 Score = 40.7 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 21/79 (26%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
          +    + A +G+      M ++  NIANA     TPG   Y R+    E           
Sbjct: 6  MFGILNTALTGIHAHKLAMNVVGHNIANA----STPG---YSRQRPVIEANPPIPLTTLT 58

Query: 55 -----MHGSGGVRVKKIGV 68
               +    G +VK I  
Sbjct: 59 QPSFPLQMGTGAKVKTIVR 77



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 18/37 (48%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V++  E A+M +    + A  + I     M+ T +++
Sbjct: 820 VSLDEEMANMIKYQHAFSAAAKVITAVDQMIQTVINM 856


>gi|221640830|ref|YP_002527092.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides
           KD131]
 gi|221161611|gb|ACM02591.1| Flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides
           KD131]
          Length = 127

 Score = 40.7 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 16/115 (13%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKT-ISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
            R ++++ N+ANA T G       YR +    FE    G+ G+R  + G  +S      D
Sbjct: 20  LRTEVVAHNLANADTPG-------YRAQDLPDFESYASGTVGLRTTRPGHLRSAEATAAD 72

Query: 79  P----GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           P    G   A+ +G      V++  E        + +   L   + S  ++ T+L
Sbjct: 73  PVPVEGRGAASPNGN----TVSLEDEMVRAVAARQQHEMALAIYQSSSRLIRTSL 123


>gi|217032694|ref|ZP_03438180.1| hypothetical protein HPB128_202g28 [Helicobacter pylori B128]
 gi|298735878|ref|YP_003728403.1| flagellar hook-associated protein 1 FlgK [Helicobacter pylori B8]
 gi|216945624|gb|EEC24275.1| hypothetical protein HPB128_202g28 [Helicobacter pylori B128]
 gi|298355067|emb|CBI65939.1| flagellar hook-associated protein 1 FlgK [Helicobacter pylori B8]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLLGI 604


>gi|146307869|ref|YP_001188334.1| flagellar hook protein FlgE [Pseudomonas mendocina ymp]
 gi|145576070|gb|ABP85602.1| flagellar basal body FlaE domain protein [Pseudomonas mendocina
          ymp]
          Length = 438

 Score = 40.7 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG 59
          S +I  SGL   +  + +   NIANA T G        +D Y    +       GSG
Sbjct: 2  SFNIGLSGLRAATKDLNVTGNNIANAGTAGFKQSRAEFADVYAASVLGTGSNPQGSG 58



 Score = 40.7 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  +G ++  NV +  +  ++    R Y AN +TI+    +  T ++L
Sbjct: 390 ALQAGALEDSNVELSDQLVNLIVAQRNYQANAKTIETESAITQTIINL 437


>gi|104782843|ref|YP_609341.1| flagellar hook protein FlgE [Pseudomonas entomophila L48]
 gi|95111830|emb|CAK16554.1| flagellar hook protein FlgE [Pseudomonas entomophila L48]
          Length = 463

 Score = 40.7 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NVN+  E  ++ +    Y AN +TI     +M T + +
Sbjct: 422 EASNVNLTQELVELIKAQSNYQANAKTISTESTIMQTIIQM 462



 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 9/63 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVK 64
          S +I  SGL   + ++ +   NIAN  T G       ++     F +V  G+   GV   
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVNTNG-------FKSSRAEFADVYAGANRLGVGKN 54

Query: 65 KIG 67
          ++G
Sbjct: 55 QVG 57


>gi|15612112|ref|NP_223764.1| flagellar hook-associated protein FlgK [Helicobacter pylori J99]
 gi|4155652|gb|AAD06640.1| FLAGELLAR HOOK-ASSOCIATED PROTEIN 1 (HAP1) [Helicobacter pylori
          J99]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|28211310|ref|NP_782254.1| flagellar basal body rod protein FlgG [Clostridium tetani E88]
 gi|28203750|gb|AAO36191.1| flagellar hook-basal body complex protein [Clostridium tetani E88]
          Length = 260

 Score = 40.7 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 18/40 (45%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NVN + E  +M    R +  N + I+   D +   ++
Sbjct: 215 EKSNVNTIREMIEMMTVMRTFETNQKIIQSIDDTLGKAVN 254


>gi|254499120|ref|ZP_05111810.1| flagellar basal body rod protein [Legionella drancourtii LLAP12]
 gi|254351659|gb|EET10504.1| flagellar basal body rod protein [Legionella drancourtii LLAP12]
          Length = 258

 Score = 40.7 bits (95), Expect = 0.063,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +  IA SGL  +   +  I+ ++AN  T         Y+   ++FE+V++ +
Sbjct: 1  MSNALAIAASGLKAEEYHIDRIANDLANLNTAN-------YKATKLTFEDVLYQN 48



 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 21/42 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV+++     +    R+Y  N + ++ + ++   T ++
Sbjct: 215 VEGSNVDMVSSLMQLTMAQRVYQLNAKAVQIADELEKLTNEI 256


>gi|86750925|ref|YP_487421.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          HaA2]
 gi|86573953|gb|ABD08510.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
          HaA2]
          Length = 623

 Score = 40.7 bits (95), Expect = 0.063,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 7/65 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  +  IA +GL    A M ++S N+ANA T G       Y RKT++    + G  G  V
Sbjct: 3  LGDALSIAMAGLRANQASMSLVSSNVANAETPG-------YVRKTVNQVTTLSGPSGSGV 55

Query: 64 KKIGV 68
             GV
Sbjct: 56 SITGV 60



 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 15/42 (35%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                 VN+  E A +      Y AN + +   + M  T + 
Sbjct: 580 YATNSGVNMDEEMAHLLSLQNAYSANARVMSTVNQMYQTLMQ 621


>gi|78048291|ref|YP_364466.1| hypothetical protein XCV2735 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78036721|emb|CAJ24414.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 98

 Score = 40.7 bits (95), Expect = 0.063,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 31/126 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+ V + R Q+ + N+A            P  R+++        +GGV   
Sbjct: 1   MSISSIASSGMQVAALRQQVAASNVA-----RQPVDGSP--RQSV--AATTQANGGVAAS 51

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  +        DP  P  +                 +       + AN   +++S +M
Sbjct: 52  VVNANA-------DPSAPAGD---------------LVEGLSARNDFQANANVLRRSDEM 89

Query: 125 MTTTLD 130
           + + LD
Sbjct: 90  LGSLLD 95


>gi|289668651|ref|ZP_06489726.1| hypothetical protein XcampmN_09192 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 98

 Score = 40.7 bits (95), Expect = 0.063,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 31/128 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+ V + R Q+ + N+A            P  R+++        +GGV   
Sbjct: 1   MSISSIASSGMQVAALRQQVAASNVA-----RQPVDGSP--RQSV--AASTQANGGVAAN 51

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +           DP  P ++                 +       + AN   +++S +M
Sbjct: 52  VVNASA-------DPSAPASD---------------LVEGLAARNDFQANANVLRRSDEM 89

Query: 125 MTTTLDLL 132
           + + LD+L
Sbjct: 90  LGSLLDVL 97


>gi|237653586|ref|YP_002889900.1| flagellar basal-body rod protein FlgB [Thauera sp. MZ1T]
 gi|237624833|gb|ACR01523.1| flagellar basal-body rod protein FlgB [Thauera sp. MZ1T]
          Length = 134

 Score = 40.7 bits (95), Expect = 0.063,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 24/125 (19%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-----GGVRVKKIG 67
           + L +Q+ R Q+I+ NIANA T         Y+ + + F   + G+      GV++    
Sbjct: 14  TALNLQAHRQQLIASNIANADTPH-------YKARDVDFRAALQGALNASREGVQMA--- 63

Query: 68  VDQSTFVEEFDPGHPVANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                      P   + + +G        V    VN+ VE A   E    Y A++  I  
Sbjct: 64  -TTQAGHIGSAPAPALESLTGYRSELQSAVDGNTVNMDVERAAFAENALHYEASVTFING 122

Query: 121 S-HDM 124
               M
Sbjct: 123 MLRSM 127


>gi|52080220|ref|YP_079011.1| flagellar basal body rod protein FlgB [Bacillus licheniformis ATCC
           14580]
 gi|52785597|ref|YP_091426.1| flagellar basal body rod protein FlgB [Bacillus licheniformis ATCC
           14580]
 gi|319646001|ref|ZP_08000231.1| FlgB protein [Bacillus sp. BT1B_CT2]
 gi|52003431|gb|AAU23373.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
           14580]
 gi|52348099|gb|AAU40733.1| FlgB [Bacillus licheniformis ATCC 14580]
 gi|317391751|gb|EFV72548.1| FlgB protein [Bacillus sp. BT1B_CT2]
          Length = 129

 Score = 40.7 bits (95), Expect = 0.063,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 20/101 (19%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD--------QSTFVE 75
           +I+ N+AN  T         Y+ K +SF+ V++     R+  I  D              
Sbjct: 24  VITNNLANVDTPN-------YKAKKVSFKNVLNEESS-RINAIKTDYRHIDFKGNEPNYS 75

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
                +     +G     NV+V  E ++M +    Y A ++
Sbjct: 76  VVSRKNTTYQENGN----NVDVDQEMSEMAKNQIQYQALVE 112


>gi|290474973|ref|YP_003467857.1| flagellar basal body rod cell-proximal protein [Xenorhabdus
           bovienii SS-2004]
 gi|289174290|emb|CBJ81080.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus bovienii SS-2004]
          Length = 251

 Score = 40.7 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +    +M    R +   ++ I  S +       +L
Sbjct: 204 GVLEGSNVNPVESMVNMIANARRFEMQMKVIHSSDENAQRANQIL 248


>gi|254562217|ref|YP_003069312.1| flagellar basal-body rod protein flgF [Methylobacterium
          extorquens DM4]
 gi|254269495|emb|CAX25461.1| flagellar basal-body rod protein flgF [Methylobacterium
          extorquens DM4]
          Length = 246

 Score = 40.7 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 10/95 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +  +  S     +  + +I+ N+AN  TTG       ++ ++  F+E +        
Sbjct: 1  MQNALFVGVSAQTALARELDVIANNMANVSTTG-------FKARSARFQEYLMPVASA-- 51

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
                        D G P+    G V+ P+ N +
Sbjct: 52 DSFQRSDRRLSYVIDQGTPLDLTQGPVE-PDSNPM 85


>gi|42524766|ref|NP_970146.1| flagellar basal-body rod protein FlgB [Bdellovibrio bacteriovorus
           HD100]
 gi|39576976|emb|CAE78205.1| flagellar basal-body rod protein FlgB [Bdellovibrio bacteriovorus
           HD100]
          Length = 136

 Score = 40.7 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 51/140 (36%), Gaps = 29/140 (20%)

Query: 1   MDYLIA-SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV----- 54
           M  +   + +   + L+++  R  + S NIANA T G       Y  K + FE       
Sbjct: 1   MSNIFDKTTNALATSLSMRQLRHNVTSSNIANAETPG-------YHAKKMDFEGALQRAL 53

Query: 55  -MHGSGGVR--------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            + G+  +         V  I V ++      DP     N  G      V+V  E + + 
Sbjct: 54  DLDGANSLSTSNPEHFAVGGISVSKTRPDIYDDPEG-AVNNDGN----TVDVEKEMSALS 108

Query: 106 ETNRLYMANLQTIKQSHDMM 125
           E   +Y A LQ I     M 
Sbjct: 109 ENAIMYKAALQLIN--KKMA 126


>gi|332673917|gb|AEE70734.1| flagellar hook-associated protein FlgK [Helicobacter pylori 83]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.065,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|313894945|ref|ZP_07828504.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312976398|gb|EFR41854.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 266

 Score = 40.7 bits (95), Expect = 0.065,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G+++  N +++ E  ++    R+Y A  + ++    ++   + D+ R
Sbjct: 216 EQGLLEMSNTSIVTEMVELINNYRVYEAGSRAVQTQDSLLDKAVNDVGR 264



 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +    +IA SG+  ++    +I+ N+ANA  TG
Sbjct: 1  MWRGLYIAASGMITETKHTDMIANNLANASNTG 33


>gi|148269976|ref|YP_001244436.1| flagellar hook-associated protein FlgK [Thermotoga petrophila
          RKU-1]
 gi|147735520|gb|ABQ46860.1| flagellar hook-associated protein FlgK [Thermotoga petrophila
          RKU-1]
          Length = 858

 Score = 40.7 bits (95), Expect = 0.065,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 21/79 (26%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
          +    + A +G+      M ++  NIANA     TPG   Y R+    E           
Sbjct: 6  MFGILNTALTGIHAHKLAMNVVGHNIANA----STPG---YSRQRPVIEANPPIPLTTLT 58

Query: 55 -----MHGSGGVRVKKIGV 68
               +    G +VK I  
Sbjct: 59 QPSFPLQMGTGAKVKTIVR 77



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 18/37 (48%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V++  E A+M +    + A  + I     M+ T +++
Sbjct: 820 VSLDEEMANMIKYQHAFSAAAKVITAVDQMIQTVINM 856


>gi|212640498|ref|YP_002317018.1| flagellar hook-basal body protein [Anoxybacillus flavithermus WK1]
 gi|212561978|gb|ACJ35033.1| Flagellar hook-basal body protein [Anoxybacillus flavithermus WK1]
          Length = 274

 Score = 40.7 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  NV +  E +++  T R Y  N + I  S  MM
Sbjct: 232 EQSNVELATEMSELMITQRSYQLNARAITLSDQMM 266



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++ S   A + +     ++ +IS NIAN  TTG       ++++   F E++
Sbjct: 1  MLRSMITAANTMNQLQQQLDVISHNIANVNTTG-------FKKRDAVFGELL 45


>gi|311068139|ref|YP_003973062.1| flagellar basal body rod protein FlgB [Bacillus atrophaeus 1942]
 gi|310868656|gb|ADP32131.1| flagellar basal body rod protein FlgB [Bacillus atrophaeus 1942]
          Length = 129

 Score = 40.7 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 20/104 (19%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD--------QSTFVE 75
           +I+ NIAN  T         Y+ K +SF+ +++     R++ +  D          +   
Sbjct: 24  VITNNIANIDTPN-------YKAKKVSFQNLLNQESS-RLESVKTDYRHVDFSDTGSNGS 75

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                +     +G     NV++  E  D+ E    Y A ++ + 
Sbjct: 76  IVANSNTAYQQNGN----NVDIDKEMTDLAENQINYQALVERMS 115


>gi|148554188|ref|YP_001261770.1| flagellar basal-body rod protein FlgF [Sphingomonas wittichii RW1]
 gi|148499378|gb|ABQ67632.1| flagellar basal-body rod protein FlgF [Sphingomonas wittichii RW1]
          Length = 247

 Score = 40.7 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           DP    A   G ++  NVNV     DM E +R +   ++ +  + D+   + DL+R
Sbjct: 192 DPQ--AAVRQGAIEGSNVNVSTTLIDMIEASRDWDMQVKMMSSAQDIDKASADLMR 245


>gi|224437871|ref|ZP_03658818.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
           18818]
 gi|313144320|ref|ZP_07806513.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
           18818]
 gi|313129351|gb|EFR46968.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
           18818]
          Length = 144

 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 35/137 (25%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---------------------HG 57
           S R  +I+ NIAN  T         YR K ++FE+ +                       
Sbjct: 21  SIRQDMIASNIANVDT-------PFYRPKDVNFEQYLARENKRIFGTGERSYKLDIAKTA 73

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            G +  ++   D +T          +A   G     +V++ VET++M + + +Y A    
Sbjct: 74  KGHLDSRRNVKDSATMFWR---DGHLAKNDGN----SVDLDVETSEMGKNSTMYQALTSA 126

Query: 118 IKQSHDMMTTTLDLLRD 134
           +++   + +  +D  R+
Sbjct: 127 LRRHKGIFSYAMDSGRN 143


>gi|121607555|ref|YP_995362.1| flagellar hook-associated protein FlgK [Verminephrobacter
          eiseniae EF01-2]
 gi|121552195|gb|ABM56344.1| flagellar hook-associated protein FlgK [Verminephrobacter
          eiseniae EF01-2]
          Length = 658

 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 14/76 (18%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SGG 60
           +++   L      +Q    NIAN  T G       Y R++++ + V            G
Sbjct: 4  LNVSTRALLADQVVLQTTGHNIANVNTPG-------YSRQSVALQTVPGQFTGNGYIGQG 56

Query: 61 VRVKKIGVDQSTFVEE 76
          V V  I   QS  +  
Sbjct: 57 VDVAGIVRSQSELLTR 72


>gi|114562339|ref|YP_749852.1| flagellar basal body rod protein FlgB [Shewanella frigidimarina
          NCIMB 400]
 gi|114333632|gb|ABI71014.1| flagellar basal-body rod protein FlgB [Shewanella frigidimarina
          NCIMB 400]
          Length = 132

 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 9/46 (19%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          G+  Q A  ++IS NIANA T         Y+ + ++F   M  + 
Sbjct: 17 GVRAQRA--EVISSNIANANTPH-------YKAQDVNFASAMQAAS 53


>gi|291617017|ref|YP_003519759.1| FlgB [Pantoea ananatis LMG 20103]
 gi|291152047|gb|ADD76631.1| FlgB [Pantoea ananatis LMG 20103]
 gi|327393468|dbj|BAK10890.1| flagellar basal-body rod protein FlgB [Pantoea ananatis AJ13355]
          Length = 157

 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG------------VR 62
           L  Q    +I++ NIANA T G       Y+ + I F   ++ +              V 
Sbjct: 38  LRAQRQ--EILASNIANADTPG-------YQARDIDFASELNRAMANGRAEGSSLALKVT 88

Query: 63  VKKIGVDQSTFVEEFD-----PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             +    Q+      D     P  P A+ +       V++  E     + +  Y  +L  
Sbjct: 89  SARHIEAQTNSAPSMDLLYRIPDQPSADGN------TVDMDRERTQFADNSLKYQTDLTL 142

Query: 118 I-KQSHDMMT 126
           I  Q   MM+
Sbjct: 143 ISSQIKGMMS 152


>gi|134095096|ref|YP_001100171.1| basal-body rod protein [Herminiimonas arsenicoxydans]
 gi|133738999|emb|CAL62047.1| Flagellar basal-body rod protein FlgF (Putative proximal rod
           protein) [Herminiimonas arsenicoxydans]
          Length = 246

 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 5/56 (8%)

Query: 82  PVANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             A+A      G V+  NVNV+    +M    R +  ++  +K +        + L
Sbjct: 188 VAADADVSLVSGAVEGSNVNVVDAMVNMITLARQFELHMNMLKHAESNAAKATEFL 243


>gi|119899030|ref|YP_934243.1| flagellar basal-body rod protein FlgB [Azoarcus sp. BH72]
 gi|119671443|emb|CAL95356.1| flagellar basal-body rod protein FlgB [Azoarcus sp. BH72]
          Length = 133

 Score = 40.7 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          + L +Q+ R Q+++ NIANA T         Y+ + I F E + G+ G
Sbjct: 14 TALNLQAHRQQLLASNIANADTPH-------YKARDIDFREALQGALG 54


>gi|170741833|ref|YP_001770488.1| flagellar basal body rod protein FlgB [Methylobacterium sp. 4-46]
 gi|168196107|gb|ACA18054.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
          Length = 127

 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 19/120 (15%)

Query: 16  AVQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSG----GVRVKKIGV 68
             Q  S R   ++ NIANA T G       Y+ + +  F EV+  +G          +  
Sbjct: 13  RAQYLSVRQATVAGNIANADTPG-------YKARDVVPFAEVLSRAGLDLAATSQGHLRA 65

Query: 69  DQSTFVEEFDPGHP-VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
             +T   +  P     A   G     +V++  E     +  R +  N   +K  H MM +
Sbjct: 66  GTTTPTAKVKPSESWDAIQGGH----SVSLEQEMLKSNDIARDFNLNTAVVKAFHRMMLS 121


>gi|317009731|gb|ADU80311.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          India7]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL      + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQNMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLLGI 604


>gi|311070151|ref|YP_003975074.1| flagellar basal-body rod protein [Bacillus atrophaeus 1942]
 gi|310870668|gb|ADP34143.1| flagellar basal-body rod protein [Bacillus atrophaeus 1942]
          Length = 271

 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
             G+ +  NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 222 KQGLSELSNVDVTSAYTEMTEAYRTFEANQKVIQAYDKSMDKAANEIGK 270



 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 10/70 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------HG 57
          ++   + A S +  Q  R +++S NIANA T+G        R     F +++        
Sbjct: 1  MLKGLYTATSAMISQQRRTEMLSNNIANANTSGYKEDQGSMRA----FPDMLLSRIEAKS 56

Query: 58 SGGVRVKKIG 67
           GGV  K+IG
Sbjct: 57 PGGVSKKEIG 66


>gi|301168504|emb|CBW28094.1| putative flagellar basal-body rod protein [Bacteriovorax marinus
           SJ]
          Length = 289

 Score = 40.7 bits (95), Expect = 0.069,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            G ++  NVN + E +++ + NR + +  + IK    +   
Sbjct: 241 QGFIEQSNVNAIQEMSELIKANRNFESIQRVIKTYDTISGK 281



 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 7/43 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          SG   Q  +++ I+ N+ANA T G       +++  I F+E +
Sbjct: 21 SGAIAQQRKVETIANNVANANTPG-------FKKDQIVFKEYL 56


>gi|118588734|ref|ZP_01546142.1| hypothetical protein SIAM614_18549 [Stappia aggregata IAM 12614]
 gi|118438720|gb|EAV45353.1| hypothetical protein SIAM614_18549 [Stappia aggregata IAM 12614]
          Length = 617

 Score = 40.7 bits (95), Expect = 0.069,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 13/73 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-- 61
          L ++ + A  G+     ++ + + NIANA T G       Y +KTIS      G+G V  
Sbjct: 3  LTSALNTAVFGITYNQRQLDVTASNIANADTAG-------YSKKTISANVYFDGNGNVAG 55

Query: 62 ----RVKKIGVDQ 70
               V++I  +Q
Sbjct: 56 LNATEVRRIVNEQ 68



 Score = 33.7 bits (77), Expect = 9.5,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V++  E A M +    Y AN + ++   D+    L++
Sbjct: 580 VDLDAELAFMVQLENAYAANARVMQTIKDLFEELLNI 616


>gi|295690742|ref|YP_003594435.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
 gi|295432645|gb|ADG11817.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
          Length = 587

 Score = 40.7 bits (95), Expect = 0.071,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E   +  T R Y A+ + I  +  M+   L++ R
Sbjct: 545 EASTVDLSTEFTGLITTQRAYSASSKIITTADQMLEELLNIKR 587



 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 15/60 (25%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------HGSGGVRVK 64
          SGL   S+ +  IS+NIAN  T G       Y+R + +F  ++        + +GGV+ +
Sbjct: 12 SGLVANSSALAAISDNIANVNTVG-------YKRSSSNFSTLVTSGSKNQTYSAGGVKAQ 64


>gi|237751406|ref|ZP_04581886.1| flagellar hook-associated protein FlgK [Helicobacter bilis ATCC
          43879]
 gi|229372772|gb|EEO23163.1| flagellar hook-associated protein FlgK [Helicobacter bilis ATCC
          43879]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.071,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 14/81 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------ 54
          M  +++S H + +GL      + +   NIANA         + Y R+ +           
Sbjct: 1  MGGILSSLHTSTTGLHAHQLMVDVTGNNIANAS-------DEFYTRQRVIVHPEAPLYFP 53

Query: 55 -MHGSGGVRVKKIGVDQSTFV 74
            +   GV V  I      FV
Sbjct: 54 DYNLGRGVNVDSIQRLHDEFV 74



 Score = 37.6 bits (87), Expect = 0.60,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 10/79 (12%)

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
            V + +  V+   I +D    V E       A     +    V+V  E  ++ +    Y 
Sbjct: 536 AVANQTQEVK---ITLDTKKSVLE-------AIKKEHLAISQVSVDEEMVNLIKFQGGYA 585

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN + I     M+ T L +
Sbjct: 586 ANAKVITTIDRMIETLLGI 604


>gi|319650827|ref|ZP_08004964.1| FlhP protein [Bacillus sp. 2_A_57_CT2]
 gi|317397425|gb|EFV78126.1| FlhP protein [Bacillus sp. 2_A_57_CT2]
          Length = 275

 Score = 40.7 bits (95), Expect = 0.071,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           A G ++  NV++  E  D+    R Y    +++  +  MM
Sbjct: 229 AQGSLEQSNVDMSKEMTDLINLQRAYQFQSRSVSMADQMM 268


>gi|167623367|ref|YP_001673661.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis
          HAW-EB4]
 gi|167353389|gb|ABZ76002.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis
          HAW-EB4]
          Length = 639

 Score = 40.7 bits (95), Expect = 0.072,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA +G+    +++ I S NIANA T G       Y R+ +S   +     G    
Sbjct: 3  LDLMNIARTGVLASQSQLAITSNNIANANTAG-------YNRQVVSQSALDSQRMGNEFY 55

Query: 65 KIGVDQSTFVEEFD 78
            G   S     ++
Sbjct: 56 GAGTYVSDVKRVYN 69


>gi|119477952|ref|ZP_01618052.1| Flagellar basal body rod protein [marine gamma proteobacterium
           HTCC2143]
 gi|119448865|gb|EAW30107.1| Flagellar basal body rod protein [marine gamma proteobacterium
           HTCC2143]
          Length = 275

 Score = 40.7 bits (95), Expect = 0.072,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 82  PVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P A+    SG V+  NVN + E   +    R +  N++ +K   +       +LR
Sbjct: 219 PDASIRLQSGFVESSNVNPVDELTAIMALARQFEINVKMMKVMEENSDAARQVLR 273


>gi|238785500|ref|ZP_04629483.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
           43970]
 gi|238713602|gb|EEQ05631.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
           43970]
          Length = 137

 Score = 40.7 bits (95), Expect = 0.072,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 25/126 (19%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQSTF 73
           L  Q    +I+S NIANA T G       ++ + I F   +       RV   GV  S  
Sbjct: 18  LRAQRQ--EILSSNIANADTPG-------FQARDIDFSSQLKKVVEQGRVSGTGVSLSLT 68

Query: 74  VEEFDPGH----PVANASGIVKYPN--------VNVLVETADMRETNRLYMANLQTI-KQ 120
                P      P  +   + + P+        V++  E  +  + +  Y  +L  I  Q
Sbjct: 69  SARHIPASTVQPPDLDL--LFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTVISSQ 126

Query: 121 SHDMMT 126
              M++
Sbjct: 127 IKGMLS 132


>gi|284041497|ref|YP_003391837.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
 gi|283945718|gb|ADB48462.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
          Length = 232

 Score = 40.7 bits (95), Expect = 0.073,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          IA SG+  +  R   I+ ++ANA     TPG    R    SF +++
Sbjct: 7  IAASGMIAEQMRQDAIANDLANA----STPGYKADRITQASFGDLL 48



 Score = 38.0 bits (88), Expect = 0.48,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G ++   ++      DM  + R Y A  + I    D +  T
Sbjct: 180 GALEGSGIDPTRTMVDMIASFRAYEAGQKVITTIDDTLRRT 220


>gi|254437430|ref|ZP_05050924.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198252876|gb|EDY77190.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 1436

 Score = 40.7 bits (95), Expect = 0.073,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          + +   I  S +  Q   + +  +NI NA T G       YRR+  +  EV 
Sbjct: 1  MASLFEIGRSAINAQRQALNVTGQNIVNANTEG-------YRRRDANLTEVF 45


>gi|78776232|ref|YP_392547.1| hypothetical protein Suden_0031 [Sulfurimonas denitrificans DSM
           1251]
 gi|78496772|gb|ABB43312.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM
           1251]
          Length = 430

 Score = 40.7 bits (95), Expect = 0.073,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV + V   ++    R Y AN + I  +  M+   L + R
Sbjct: 388 EGSNVRMEVALTEIIVMQRSYDANSKCITTADQMLQKALSMHR 430


>gi|321313188|ref|YP_004205475.1| flagellar basal-body rod protein [Bacillus subtilis BSn5]
 gi|320019462|gb|ADV94448.1| flagellar basal-body rod protein [Bacillus subtilis BSn5]
          Length = 270

 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
             G+ +  NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 221 KQGVSELSNVDVTSAYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 269



 Score = 40.3 bits (94), Expect = 0.095,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A S +  Q  R +++S NIANA T+G        R 
Sbjct: 1  MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRA 43


>gi|296534169|ref|ZP_06896661.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis ATCC
           49957]
 gi|296265505|gb|EFH11638.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis ATCC
           49957]
          Length = 500

 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 87  SGIVKYP-NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+V+    V+   E A+M      Y AN + +     M    LD +R
Sbjct: 453 DGLVQKSEGVDTDAELANMVALQNAYSANARVMSAVQSMWDALLDAVR 500



 Score = 40.3 bits (94), Expect = 0.083,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 9/62 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L ++   A SGL + + +++  ++NIANA T G       Y RKT+S E V   +GGVR 
Sbjct: 3  LSSALLTATSGLRLTTRQLEQSAQNIANADTAG-------YTRKTVSGEAVT--TGGVRT 53

Query: 64 KK 65
           +
Sbjct: 54 GE 55


>gi|260893854|ref|YP_003239951.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
 gi|260865995|gb|ACX53101.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
          Length = 260

 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          +I   +IA SGL +Q A + + + N+AN      TPG    R    +F EV+
Sbjct: 1  MIRGIYIAASGLNLQQALLDVTANNLANL----STPGFKQDRLTATTFAEVL 48



 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NV++  E A +    R Y    + +K   +++   ++
Sbjct: 211 QGWLEAANVDLAGEMARLCTCLRAYQLASRALKTHDELLNRIIN 254


>gi|257484945|ref|ZP_05638986.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 126

 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
            SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 77  ESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 126


>gi|300722681|ref|YP_003711971.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629188|emb|CBJ89784.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus nematophila ATCC 19061]
          Length = 251

 Score = 40.7 bits (95), Expect = 0.076,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +    +M    R +   ++ I  S +       +L
Sbjct: 204 GVLEGSNVNPVESMVNMIANARRFEMQMKVIHSSDENAQRANQIL 248


>gi|75675315|ref|YP_317736.1| flagellar basal body rod protein FlgF [Nitrobacter winogradskyi
           Nb-255]
 gi|74420185|gb|ABA04384.1| Flagellar basal body rod protein [Nitrobacter winogradskyi Nb-255]
          Length = 255

 Score = 40.7 bits (95), Expect = 0.076,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E + + E +R Y      ++Q  D+  + ++
Sbjct: 205 QGFIERSNVNAVTEMSRLVEVSRAYTQMATLLQQQSDLQRSAIE 248


>gi|115523557|ref|YP_780468.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisA53]
 gi|115517504|gb|ABJ05488.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisA53]
          Length = 254

 Score = 40.7 bits (95), Expect = 0.076,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN ++E   M +  R Y      ++Q  ++  T L+
Sbjct: 204 QGFIEKSNVNSVMEMTRMIDVTRAYTQLSAMLQQQGELRRTALE 247


>gi|308063903|gb|ADO05790.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          Sat464]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.076,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNASYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQEAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD +      D
Sbjct: 54 TKNVNMGVDVTAIERVHD 71



 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLLGI 604


>gi|188527901|ref|YP_001910588.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          Shi470]
 gi|188144141|gb|ACD48558.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          Shi470]
 gi|308062395|gb|ADO04283.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          Cuz20]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.076,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNASYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQEAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD +      D
Sbjct: 54 TKNVNMGVDVTAIERVHD 71



 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLLGI 604


>gi|316932790|ref|YP_004107772.1| flagellar hook-basal body protein [Rhodopseudomonas palustris DX-1]
 gi|315600504|gb|ADU43039.1| flagellar hook-basal body protein [Rhodopseudomonas palustris DX-1]
          Length = 616

 Score = 40.7 bits (95), Expect = 0.077,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N ++  E   +  T + Y AN + I  ++ M+   L+++R
Sbjct: 576 SNTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLNVMR 616


>gi|295399806|ref|ZP_06809787.1| flagellar basal-body rod protein FlgB [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312111682|ref|YP_003989998.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y4.1MC1]
 gi|294978209|gb|EFG53806.1| flagellar basal-body rod protein FlgB [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311216783|gb|ADP75387.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y4.1MC1]
          Length = 130

 Score = 40.7 bits (95), Expect = 0.077,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 19/114 (16%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQST 72
           GL   + R ++I+ NIAN  T         Y+ K++ F   +  +   +  K+       
Sbjct: 14  GLDYAALREKVIANNIANVDTPN-------YKAKSVQFRTELDRALQPLEAKRTHPKHLP 66

Query: 73  F-VEEFDP------GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           F  +  +          V N +G     NV++  E AD+ E    Y A ++ + 
Sbjct: 67  FHHQISNQFFVTKRTDVVYNHNGN----NVDIDKEMADLAENQIYYNALVERLN 116


>gi|317178579|dbj|BAJ56367.1| flagellar hook-associated protein FlgK [Helicobacter pylori F30]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.077,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNASYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQEAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD +      D
Sbjct: 54 TKNVNMGVDVTAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|307637788|gb|ADN80238.1| Flagellar hook-associated protein [Helicobacter pylori 908]
 gi|325996386|gb|ADZ51791.1| Flagellar hook-associated protein [Helicobacter pylori 2018]
 gi|325997974|gb|ADZ50182.1| Flagellar hook-associated protein [Helicobacter pylori 2017]
          Length = 606

 Score = 40.7 bits (95), Expect = 0.077,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNMNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|148980296|ref|ZP_01815983.1| putative flagellar hook-associated protein [Vibrionales bacterium
          SWAT-3]
 gi|145961315|gb|EDK26625.1| putative flagellar hook-associated protein [Vibrionales bacterium
          SWAT-3]
          Length = 459

 Score = 40.7 bits (95), Expect = 0.077,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 17/77 (22%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GG 60
          +I  SG       +   ++N AN  T G       Y R+ ++ E  + G+         G
Sbjct: 5  NIGLSGALANRVALNTTAQNTANVNTPG-------YSRQIVTMEASLSGNAVNGINLGAG 57

Query: 61 VRVKKI--GVDQSTFVE 75
          V V  I    DQS+   
Sbjct: 58 VEVSDILRIADQSSINR 74



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN   E A+M      Y AN++ I  ++ M  T L 
Sbjct: 420 SAVNSDEEAANMLLYLNAYEANMKIISTANQMFQTLLR 457


>gi|2916790|emb|CAA11956.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
          Length = 229

 Score = 40.7 bits (95), Expect = 0.077,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 7/49 (14%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           R+  +++NIAN+ T G       +R   + F +V+  +   +V  +  
Sbjct: 5  KRLNTLADNIANSNTVG-------FRATEVKFNQVLGDTKPTKVSYVSE 46



 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 17/92 (18%)

Query: 58  SGGVRVKKIGVDQSTFV---EEFDPGH--PVANAS------------GIVKYPNVNVLVE 100
             GV++  +G+ ++ F      +D     P A               G ++  NVN + E
Sbjct: 134 QNGVQIALLGLYEADFSKGFMRYDNSSDMPAAQPEPVVDRFDVGVMQGFLEESNVNAIQE 193

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            + +    R +      ++ S   +   ++ L
Sbjct: 194 MSQLIMITRAFDNVTALMRDSEGSLDKAIETL 225


>gi|170744543|ref|YP_001773198.1| flagellar hook protein FlgE [Methylobacterium sp. 4-46]
 gi|168198817|gb|ACA20764.1| protein of unknown function DUF1078 domain protein
          [Methylobacterium sp. 4-46]
          Length = 407

 Score = 40.3 bits (94), Expect = 0.079,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 15/70 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------EEVM 55
          L+ +     SG+  QS R+  ++EN+ NA TTG       Y+R +  F            
Sbjct: 3  LLGALRTGMSGMNAQSNRISTVAENVQNAGTTG-------YKRVSTEFSSLLLSSSATGD 55

Query: 56 HGSGGVRVKK 65
          + SG V   +
Sbjct: 56 YNSGSVETVQ 65



 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV+V  E   M  +  +Y AN +    S++M+ T + L R
Sbjct: 361 SGALEQSNVDVSTELTSMIASQTVYTANSKVFMTSNEMLDTLMQLKR 407


>gi|225849146|ref|YP_002729310.1| flagellar basal-body rod protein FlgB [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225643923|gb|ACN98973.1| flagellar basal-body rod protein FlgB [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 122

 Score = 40.3 bits (94), Expect = 0.079,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 35/118 (29%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R ++I  NIAN  T         Y+ K + FEEV      +++              +P 
Sbjct: 18  RFKVIQGNIANVNT-------PFYKPKDLKFEEVFKNFIPMKLT-------------NPK 57

Query: 81  H--PVANAS--------GIVKYPN---VNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           H  P  +          G +   +   VN+  E A + E++ +Y   ++ +K   +M+
Sbjct: 58  HINPAGSEDIKITSFENGYITGYDQNKVNLEEEMAKLAESSIMYKTLVEVMK--KEMV 113


>gi|218288303|ref|ZP_03492602.1| protein of unknown function DUF1078 domain protein
          [Alicyclobacillus acidocaldarius LAA1]
 gi|218241662|gb|EED08835.1| protein of unknown function DUF1078 domain protein
          [Alicyclobacillus acidocaldarius LAA1]
          Length = 301

 Score = 40.3 bits (94), Expect = 0.079,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S + A SG+      + ++  NIAN  T G       +++  + F +++  +
Sbjct: 1  MLRSMNSAISGMQAFQTDLDVVGNNIANVETVG-------FKQSDVQFADLLSQT 48



 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ASG ++  NV++  + A+M      Y+AN   I   + ++   +++
Sbjct: 253 ASGELEGSNVDLSQQFAEMIVAQNAYVANTHMIGTDNAILQALVNM 298


>gi|147678401|ref|YP_001212616.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
          SI]
 gi|146274498|dbj|BAF60247.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
          SI]
          Length = 256

 Score = 40.3 bits (94), Expect = 0.079,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 10/65 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
          ++ +   A +GL  Q  R+  I+ ++AN    G       Y+R    F E++       G
Sbjct: 1  MLKALSSAVTGLNAQRTRVDAIAVDLANIAAAG-------YKRNRTRFAELVSQEIEKQG 53

Query: 61 VRVKK 65
          + V  
Sbjct: 54 IPVAA 58



 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  NV++  E   + E   +Y  N ++++   +M     +L
Sbjct: 210 QGYLETSNVDLTGEITGLIEAQTVYGFNARSVRIVDEMWGMANNL 254


>gi|256833255|ref|YP_003161982.1| flagellar hook-associated protein FlgK [Jonesia denitrificans DSM
          20603]
 gi|256686786|gb|ACV09679.1| flagellar hook-associated protein FlgK [Jonesia denitrificans DSM
          20603]
          Length = 463

 Score = 40.3 bits (94), Expect = 0.080,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 5/69 (7%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANART---TGDTPGSDPYRRKTIS--FEEVMHGSG 59
           +    A S L  Q A M+I  +NIAN  T   T       P      +  F +      
Sbjct: 4  FSGLSTALSSLNAQRAAMEITGQNIANVNTPGYTRQRADMTPVSAGQTASLFSQGAKIGN 63

Query: 60 GVRVKKIGV 68
          GVR+  I  
Sbjct: 64 GVRITDISR 72



 Score = 37.2 bits (86), Expect = 0.74,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V+   ET ++    R Y A  + +    +M+   ++
Sbjct: 421 VDTDEETVNLLSYQRAYQAAARVMTTVDEMLDQLIN 456


>gi|291534845|emb|CBL07957.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          M50/1]
          Length = 613

 Score = 40.3 bits (94), Expect = 0.081,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANART 34
          M        IA+SGL+     +   + NI+N +T
Sbjct: 1  MPSTFFGLTIASSGLSAYQVALNTSANNISNVQT 34


>gi|296331270|ref|ZP_06873742.1| flagellar basal-body rod protein [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676257|ref|YP_003867929.1| putative flagellar basal-body rod protein [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151385|gb|EFG92262.1| flagellar basal-body rod protein [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414501|gb|ADM39620.1| putative flagellar basal-body rod protein [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 270

 Score = 40.3 bits (94), Expect = 0.081,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
             G+ +  NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 221 KQGVSELSNVDVTSAYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 269



 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A S +  Q  R +++S NIANA T+G        R 
Sbjct: 1  MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRA 43


>gi|289679022|ref|ZP_06499912.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           syringae FF5]
          Length = 151

 Score = 40.3 bits (94), Expect = 0.081,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
            SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 102 ESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 151


>gi|240145382|ref|ZP_04743983.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          L1-82]
 gi|257202503|gb|EEV00788.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          L1-82]
          Length = 613

 Score = 40.3 bits (94), Expect = 0.081,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANART 34
          M        IA+SGL+     +   + NI+N +T
Sbjct: 1  MPSTFFGLTIASSGLSAYQVALNTSANNISNVQT 34


>gi|70729005|ref|YP_258739.1| flagellar basal body rod protein FlgF [Pseudomonas fluorescens
           Pf-5]
 gi|68343304|gb|AAY90910.1| flagellar basal-body rod protein FlgF [Pseudomonas fluorescens
           Pf-5]
          Length = 246

 Score = 40.3 bits (94), Expect = 0.081,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 6/60 (10%)

Query: 78  DPGHPVANAS---GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH---DMMTTTLDL 131
            P    AN     G ++  NVN + E   +   +R +  +++ +  +      M   L +
Sbjct: 186 QPAPADANVQLVSGFLESSNVNAVEEMTAVLALSRQFELHVKMMNSAKEDDQAMARVLQI 245


>gi|16080693|ref|NP_391521.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311597|ref|ZP_03593444.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315924|ref|ZP_03597729.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320837|ref|ZP_03602131.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325122|ref|ZP_03606416.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|6648066|sp|P39752|FLHO_BACSU RecName: Full=Flagellar hook-basal body complex protein flhO
 gi|1763700|emb|CAB05950.1| flhO [Bacillus subtilis subsp. subtilis str. 168]
 gi|2636165|emb|CAB15657.1| putative flagellar basal-body rod protein [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 270

 Score = 40.3 bits (94), Expect = 0.081,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
             G+ +  NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 221 KQGVSELSNVDVTSAYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 269



 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A S +  Q  R +++S NIANA T+G        R 
Sbjct: 1  MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRA 43


>gi|206974982|ref|ZP_03235897.1| flagellar hook protein FlgE [Bacillus cereus H3081.97]
 gi|206747001|gb|EDZ58393.1| flagellar hook protein FlgE [Bacillus cereus H3081.97]
          Length = 407

 Score = 40.3 bits (94), Expect = 0.082,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 17/90 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +    +
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNS---I 50

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G D       +   +P +  +G VK  
Sbjct: 51 GAKGDD------RYAGTNPKSIGNG-VKMS 73



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 368 NVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|299131784|ref|ZP_07024979.1| flagellar basal-body rod protein FlgF [Afipia sp. 1NLS2]
 gi|298591921|gb|EFI52121.1| flagellar basal-body rod protein FlgF [Afipia sp. 1NLS2]
          Length = 256

 Score = 40.3 bits (94), Expect = 0.083,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 19/45 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E + M E  R Y      ++Q  D+    + 
Sbjct: 205 KEGFIERSNVNAIAEMSRMLEITRTYQNISNLMQQQADLRKNAIQ 249


>gi|238916198|ref|YP_002929715.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens
          ATCC 27750]
 gi|238871558|gb|ACR71268.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens
          ATCC 27750]
          Length = 646

 Score = 40.3 bits (94), Expect = 0.084,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 13/73 (17%)

Query: 1  MDYLIASAHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M   +A   I  +GL   Q+A +   + N++N  T+G       Y R+ ++F +  +   
Sbjct: 1  MANGMAGLFIGTTGLKTAQTA-LNTTAHNLSNINTSG-------YTRQQVTFSDTQY--- 49

Query: 60 GVRVKKIGVDQST 72
           VRV       S 
Sbjct: 50 -VRVNTSDKVSSP 61


>gi|206890640|ref|YP_002248112.1| flagellar basal-body rod protein FlgB [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742578|gb|ACI21635.1| flagellar basal-body rod protein FlgB [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 111

 Score = 40.3 bits (94), Expect = 0.084,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 29/118 (24%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R +I++ NIANA T         Y+ K I+F+E +  +            + +     P 
Sbjct: 18  RQKILASNIANADTPN-------YKAKDINFQEELKKAA-------ESHNAEYKVIEAPT 63

Query: 81  HPVANASGIVKYPN-----VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                       PN     VN+ VE   + ET  +Y    Q       M+   +   R
Sbjct: 64  ----------TMPNRDGNTVNIEVEMTKLAETMLMYNGATQLFSTRIRMLKDAIKGGR 111


>gi|89095666|ref|ZP_01168560.1| FlhP [Bacillus sp. NRRL B-14911]
 gi|89089412|gb|EAR68519.1| FlhP [Bacillus sp. NRRL B-14911]
          Length = 274

 Score = 40.3 bits (94), Expect = 0.084,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  NVN+  E  D+    R Y    + I  +  MM
Sbjct: 233 EQSNVNMQKEMTDLITVQRAYQFQSRAISMADQMM 267



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 8/52 (15%)

Query: 5  IASAHIANSGLAVQSAR-MQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          ++   I  +    Q  + M I S N+AN  TTG       Y+R+  +F +++
Sbjct: 1  MSRMMITATNTLAQLQKQMDITSHNMANVDTTG-------YKRREATFTDLL 45


>gi|260431756|ref|ZP_05785727.1| flagellar hook protein FlgE [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415584|gb|EEX08843.1| flagellar hook protein FlgE [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 439

 Score = 40.3 bits (94), Expect = 0.084,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E   M +T R Y ++ + I+   +M+  T ++ R
Sbjct: 402 DVATELTSMIQTQRAYSSSAKVIQTVDEMLQETTNIKR 439



 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 14/69 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          + +S +   + L   + R+  IS+NIAN+ T G       Y+R    F  ++       +
Sbjct: 11 ISSSLNAGVAALKANANRLATISDNIANSSTFG-------YKRVETDFHSMVTAGQGGSY 63

Query: 57 GSGGVRVKK 65
           +GGVR   
Sbjct: 64 SAGGVRTTS 72


>gi|56695115|ref|YP_165462.1| flagellar hook protein FlgE, putative [Ruegeria pomeroyi DSS-3]
 gi|56676852|gb|AAV93518.1| flagellar hook protein FlgE, putative [Ruegeria pomeroyi DSS-3]
          Length = 431

 Score = 40.3 bits (94), Expect = 0.084,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 14/68 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          + +S +   + L+  ++R+  IS+NIAN+ T G       Y+R    F  +++ S     
Sbjct: 3  ISSSLNAGVAALSANASRLATISDNIANSSTYG-------YKRVETDFHALVNASGRGKY 55

Query: 59 --GGVRVK 64
            GGVR  
Sbjct: 56 TAGGVRTT 63



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E   M +T R Y ++ + I+   +M+  T ++ R
Sbjct: 394 DVATELTAMIQTQRAYSSSAKVIQTVDEMLQETTNIKR 431


>gi|170744541|ref|YP_001773196.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
 gi|168198815|gb|ACA20762.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
          Length = 242

 Score = 40.3 bits (94), Expect = 0.085,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +    +++ S       R+  ++ NIAN  T G       YR +   FE V   +
Sbjct: 1  MQNGLYVSLSAQVALQKRLDTVANNIANLATVG-------YRAEETKFEAVFDKA 48



 Score = 38.0 bits (88), Expect = 0.48,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVN ++E   +    R +   + T  ++   + + +  L
Sbjct: 193 QGHLEGANVNPILEMTKLIAIQRAFDNAVATASEADSSLQSAIRTL 238


>gi|251799752|ref|YP_003014483.1| hypothetical protein Pjdr2_5791 [Paenibacillus sp. JDR-2]
 gi|247547378|gb|ACT04397.1| protein of unknown function DUF1078 domain protein [Paenibacillus
          sp. JDR-2]
          Length = 275

 Score = 40.3 bits (94), Expect = 0.086,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 8/55 (14%)

Query: 5  IASAHIANS-GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + S+ I  S  +     ++ ++++NIAN  T G       Y+RK  +FE++++ +
Sbjct: 1  MNSSMINASVSMNALQQKLDMLADNIANVNTVG-------YKRKEATFEDLLNNT 48



 Score = 40.3 bits (94), Expect = 0.086,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
              T+  + +   + G+ V  +  + +      +  + +A   G ++  NVN+  E  ++
Sbjct: 192 AALTLVADNLYEIADGINVADVLQNVTP-----NGENGIALRQGALEQSNVNLGDEMTEL 246

Query: 105 RETNRLYMANLQTIKQSHDMM 125
               R Y    + +  S  MM
Sbjct: 247 INVQRAYQMAARALTSSDTMM 267


>gi|94500241|ref|ZP_01306774.1| Flagellar hook protein FlgE [Oceanobacter sp. RED65]
 gi|94427540|gb|EAT12517.1| Flagellar hook protein FlgE [Oceanobacter sp. RED65]
          Length = 1240

 Score = 40.3 bits (94), Expect = 0.086,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 93   PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             NV++  E   +    R + A+ +TI+ S  +  T + L
Sbjct: 1202 SNVDLSEELVGLIIAQRNFQASAKTIETSDTVTQTIIQL 1240



 Score = 35.3 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          + +I  SG+   S  +++   N+ANA T G
Sbjct: 2  AFNIGLSGIRAASTDLEVTGNNVANASTVG 31


>gi|219670203|ref|YP_002460638.1| flagellar hook-associated protein FlgK [Desulfitobacterium
          hafniense DCB-2]
 gi|219540463|gb|ACL22202.1| flagellar hook-associated protein FlgK [Desulfitobacterium
          hafniense DCB-2]
          Length = 583

 Score = 40.3 bits (94), Expect = 0.086,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 26/79 (32%), Gaps = 18/79 (22%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
          M    +   +A   L  Q   +     NIANA T G       Y R+ ++ +     S  
Sbjct: 1  MRSTFSGLELARRALESQQIALDTTGHNIANANTIG-------YTRQVVNLQATSPDSIP 53

Query: 59 ---------GGVRVKKIGV 68
                    GV V+ I  
Sbjct: 54 GMGHYLSIGTGVTVQSIER 72


>gi|222099583|ref|YP_002534151.1| Flagellar hook-associated protein 1 [Thermotoga neapolitana DSM
           4359]
 gi|221571973|gb|ACM22785.1| Flagellar hook-associated protein 1 [Thermotoga neapolitana DSM
           4359]
          Length = 860

 Score = 40.3 bits (94), Expect = 0.087,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 21/39 (53%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V++  E A+M E    + A  + I    +M+ T ++++R
Sbjct: 822 VSLDEEMANMIEYQHAFSAAAKVISTVDEMIQTVINMVR 860



 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          +    + A +G+      M ++  NIANA T G       Y R+    E   
Sbjct: 8  MFGILNTALTGIYTHKLAMNVVGHNIANANTPG-------YSRQRPVIEATP 52


>gi|261420741|ref|YP_003254423.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|319768411|ref|YP_004133912.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
 gi|261377198|gb|ACX79941.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|317113277|gb|ADU95769.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
          Length = 276

 Score = 40.3 bits (94), Expect = 0.087,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A SG+  Q  R+  ++ N+ANA T G    +   R 
Sbjct: 1  MLRGLYTAASGMLAQERRVDWLTNNLANAETPGYKADAAAMRA 43



 Score = 37.6 bits (87), Expect = 0.61,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 10/64 (15%)

Query: 80  GHPVANASGIVKY---------PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL- 129
             P+  A G V Y          NV++     D+    R + AN + ++     +   + 
Sbjct: 211 TGPLPQAPGNVTYTVKQRFLERSNVDIERTMTDLLAAYRTFEANQKIVQAYDRSLDKAVN 270

Query: 130 DLLR 133
           ++ R
Sbjct: 271 EVGR 274


>gi|332531615|ref|ZP_08407512.1| flagellar basal-body rod protein FlgB [Hylemonella gracilis ATCC
          19624]
 gi|332038978|gb|EGI75407.1| flagellar basal-body rod protein FlgB [Hylemonella gracilis ATCC
          19624]
          Length = 161

 Score = 40.3 bits (94), Expect = 0.088,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 7/59 (11%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          D L  +       L ++S R + I+ NIAN    GDTPG   Y+ +   F+  M  + G
Sbjct: 3  DKLTGTLDFHGKALVLRSERQRTIASNIAN----GDTPG---YQARDFDFKSAMQEALG 54


>gi|451871|gb|AAB59019.1| flagellar hook-filament junction protein [Bacillus subtilis]
          Length = 129

 Score = 40.3 bits (94), Expect = 0.088,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          M         A   L+ Q A +   + N+ANA T G       Y R+ +S E   +
Sbjct: 1  MTSTFMGLETARRALSAQQAALSTTANNVANANTDG-------YTRQRVSLEATDY 49


>gi|229195966|ref|ZP_04322719.1| Flagellar hook protein flgE [Bacillus cereus m1293]
 gi|228587525|gb|EEK45590.1| Flagellar hook protein flgE [Bacillus cereus m1293]
          Length = 407

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 17/90 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +    +
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNS---I 50

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G D       +   +P +  +G VK  
Sbjct: 51 GAKGDD------RYAGTNPKSIGNG-VKMS 73



 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 85  NASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 354 NGAGKVRGSAQEGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|208435439|ref|YP_002267105.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|208433368|gb|ACI28239.1| flagellar basal-body rod protein [Helicobacter pylori G27]
          Length = 140

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  +S R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFDLVYKALDYRSLRQDMIASNIANVDT-------PFYRPKDLDFESVLAE--- 49

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---------------------VANASGIVKYPNVNVLV 99
            +  +I  +QS+ V      +P                     +A   G     +V++ +
Sbjct: 50  -KKAEIFENQSSKVLPLAHTNPRHLDFENSTKDGASLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKN 139


>gi|167644975|ref|YP_001682638.1| hypothetical protein Caul_1010 [Caulobacter sp. K31]
 gi|167347405|gb|ABZ70140.1| protein of unknown function DUF1078 domain protein [Caulobacter sp.
           K31]
          Length = 556

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E   +  T R Y A+ + I  +  M+   L + R
Sbjct: 514 EASTVDLSTEFTGLITTQRAYSASSKIITTADQMLEELLSIKR 556



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 15/60 (25%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE--------VMHGSGGVRVK 64
          SGL   S+ +  IS+NIAN  T G       Y+R + +F            + +GGV+ +
Sbjct: 12 SGLISNSSALAAISDNIANVNTVG-------YKRSSANFSTLVTAQSKSATYSAGGVKAQ 64


>gi|42780846|ref|NP_978093.1| flagellar hook protein FlgE [Bacillus cereus ATCC 10987]
 gi|42736766|gb|AAS40701.1| flagellar hook protein FlgE, putative [Bacillus cereus ATCC
          10987]
          Length = 407

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 17/90 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +    +
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNS---I 50

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G D       +   +P +  +G VK  
Sbjct: 51 GAKGDD------RYAGTNPKSIGNG-VKMS 73



 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 85  NASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 354 NGAGKVRGSAQEGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|302343763|ref|YP_003808292.1| flagellar hook-associated protein FlgK [Desulfarculus baarsii DSM
           2075]
 gi|301640376|gb|ADK85698.1| flagellar hook-associated protein FlgK [Desulfarculus baarsii DSM
           2075]
          Length = 574

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              V++  E   M +  R Y    Q I+ S +++ T + +++
Sbjct: 533 MSGVSLDEEMVRMIQFQRSYQMAAQMIQVSDELLQTLIGIVK 574



 Score = 37.6 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 25/66 (37%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  + +   I+   L     ++ ++S N+AN  T G +        +   +    +   G
Sbjct: 1  MPGIYSMMDISRWALNASVDQLDVVSHNVANVNTPGYSRQVAVLATRNPQYSSKGYFGNG 60

Query: 61 VRVKKI 66
          V+   +
Sbjct: 61 VQTTTV 66


>gi|291539399|emb|CBL12510.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          XB6B4]
          Length = 613

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANART 34
          M        IA+SGL+     +   + NI+N +T
Sbjct: 1  MPSTFFGLTIASSGLSAYQVALNTSANNISNVQT 34


>gi|291486215|dbj|BAI87290.1| flagellar basal-body rod protein [Bacillus subtilis subsp. natto
           BEST195]
          Length = 270

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
             G+ +  NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 221 KQGVSELSNVDVTSAYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 269



 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A S +  Q  R +++S NIANA T+G        R 
Sbjct: 1  MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRA 43


>gi|284041496|ref|YP_003391836.1| flagellar hook-basal body protein [Conexibacter woesei DSM 14684]
 gi|283945717|gb|ADB48461.1| flagellar hook-basal body protein [Conexibacter woesei DSM 14684]
          Length = 245

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++     DM    R +    + I     M+     + R
Sbjct: 199 QGTLEGSNVDMSDAMVDMMNAQRAFQLASRAIHMQDQMLEVANQVKR 245


>gi|229132566|ref|ZP_04261415.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST196]
 gi|228650912|gb|EEL06898.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST196]
          Length = 407

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 42/90 (46%), Gaps = 17/90 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +    +
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNS---I 50

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G D      ++   +P +  +G VK  
Sbjct: 51 GSKGDD------KYAGTNPKSIGNG-VKMS 73



 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 85  NASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 354 NGAGKVRGSAQEGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|298530646|ref|ZP_07018048.1| flagellar basal-body rod protein FlgB [Desulfonatronospira
          thiodismutans ASO3-1]
 gi|298510020|gb|EFI33924.1| flagellar basal-body rod protein FlgB [Desulfonatronospira
          thiodismutans ASO3-1]
          Length = 136

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 16/71 (22%)

Query: 21 RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
          R  ++S N+AN +T G       Y+ + + FEE +  +       + +D    +   DPG
Sbjct: 22 RQNVVSSNLANVKTPG-------YQARRVEFEEQLQSA-------LNLDARGKMARTDPG 67

Query: 81 HPVA--NASGI 89
          H     +  G 
Sbjct: 68 HVSGAFDPQGF 78


>gi|34498339|ref|NP_902554.1| flagellar basal-body rod protein flgF [Chromobacterium violaceum
           ATCC 12472]
 gi|34104193|gb|AAQ60552.1| flagellar basal-body rod protein flgF [Chromobacterium violaceum
           ATCC 12472]
          Length = 246

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 15/40 (37%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            NVN +     M    R Y  N++ ++ S         LL
Sbjct: 204 SNVNSVEALVQMISHGRQYELNIKMMQTSQQNDQQAAQLL 243


>gi|297531535|ref|YP_003672810.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
 gi|297254787|gb|ADI28233.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
          Length = 276

 Score = 40.3 bits (94), Expect = 0.091,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A SG+  Q  R+  ++ N+ANA T G    +   R 
Sbjct: 1  MLRGLYTAASGMLAQERRVDWLTNNLANAETPGYKADAAAMRA 43



 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 10/64 (15%)

Query: 80  GHPVANASGIVKY---------PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL- 129
             P+  A G V Y          NV++     D+    R + AN + ++     +   + 
Sbjct: 211 TGPLPQAPGNVTYTVKQRFLERSNVDIERTMTDLLAAYRTFEANQKIVQAYDRSLDKAVN 270

Query: 130 DLLR 133
           ++ R
Sbjct: 271 EVGR 274


>gi|209884510|ref|YP_002288367.1| flagellar hook-associated protein FlgK [Oligotropha carboxidovorans
           OM5]
 gi|209872706|gb|ACI92502.1| flagellar hook-associated protein FlgK [Oligotropha carboxidovorans
           OM5]
          Length = 624

 Score = 40.3 bits (94), Expect = 0.091,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 15/40 (37%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               VN+  E A +      Y AN + +    DM  + L 
Sbjct: 583 ATSGVNIDEEMAHLLALQNAYSANARVMSTVKDMFDSLLR 622



 Score = 34.1 bits (78), Expect = 6.9,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 9/65 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GV 61
          L  +   A SGL    A + +++ N++N  T G       Y RK+++  +   G+G  GV
Sbjct: 3  LTQALATAMSGLRANQAALALVASNVSNIETPG-------YVRKSLNQAQTTTGTGSSGV 55

Query: 62 RVKKI 66
           V  +
Sbjct: 56 IVTGV 60


>gi|189426324|ref|YP_001953501.1| flagellar hook-associated protein FlgK [Geobacter lovleyi SZ]
 gi|189422583|gb|ACD96981.1| flagellar hook-associated protein FlgK [Geobacter lovleyi SZ]
          Length = 465

 Score = 40.3 bits (94), Expect = 0.091,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 14/72 (19%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          L A   I  +G+ V     +++SENIAN  T G       Y R+ I  E     +     
Sbjct: 3  LSAVLQIGTTGMRVYQVATEVVSENIANVNTPG-------YSRQRIVLETAEASTHNGFP 55

Query: 59 --GGVRVKKIGV 68
             GV V  +  
Sbjct: 56 LGSGVNVAAVER 67



 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E  D+ +  R Y A  + I  + DM+   ++L+R
Sbjct: 425 SGVSLDEELTDLMKYQRSYQACAKLITTAGDMLDIAVNLVR 465


>gi|222084859|ref|YP_002543388.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722307|gb|ACM25463.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 244

 Score = 40.3 bits (94), Expect = 0.092,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A G ++  NVN L E  ++ E +R +         S   ++  +  L
Sbjct: 194 AQGYLENSNVNGLREMTELIEVSRAFDNITSLTNSSESTLSEAIKTL 240



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 31/56 (55%), Gaps = 9/56 (16%)

Query: 4  LIASAHIA-NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  +++ +S +A++  R+  +++N+AN  TTG       +R   + F +V+  +
Sbjct: 1  MQSGIYVSLSSQMALER-RLTTVADNMANVNTTG-------FRGTEVKFNQVLSNT 48


>gi|94968683|ref|YP_590731.1| flagellar basal-body rod protein FlgB [Candidatus Koribacter
           versatilis Ellin345]
 gi|94550733|gb|ABF40657.1| flagellar basal-body rod protein FlgB [Candidatus Koribacter
           versatilis Ellin345]
          Length = 118

 Score = 40.3 bits (94), Expect = 0.092,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 21/126 (16%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++A   L V +AR ++I+ N+AN  T G       Y  + I F   +    G   +  G
Sbjct: 9   LNVAERALDVSAARQRVIANNMANVDTPG-------YHTRDIDFAGQLRQMLG---EASG 58

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYP---NVNVLVETADMRETNRLYMANLQTIKQSHDM 124
             Q+T      P        G+V+ P   NVNV  E+  M  T   +   +Q I+     
Sbjct: 59  GSQTTLASRNVP--------GLVERPDGNNVNVERESLLMAHTQLEFNTAIQVIRSEFKR 110

Query: 125 MTTTLD 130
           +   + 
Sbjct: 111 IQMAIQ 116


>gi|303326603|ref|ZP_07357045.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp.
          3_1_syn3]
 gi|302862591|gb|EFL85523.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp.
          3_1_syn3]
          Length = 137

 Score = 40.3 bits (94), Expect = 0.092,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 1  MDYLIAS-AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M  +  S   + +  + +Q  R  +I+ N+AN  T         Y+ + ++FE+ +  + 
Sbjct: 1  MKSMFNSQIGLVSRVMDMQLQRQNVITSNLANVETPN-------YKPRELAFEKELQSAL 53

Query: 60 GVRVKKIGVDQST--FVEEFDPGH 81
          G+ +K      S       F+P +
Sbjct: 54 GLDMKGRMSATSEGHMPAAFNPDN 77


>gi|217959237|ref|YP_002337785.1| flagellar hook protein FlgE [Bacillus cereus AH187]
 gi|229138454|ref|ZP_04267043.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST26]
 gi|217065278|gb|ACJ79528.1| flagellar hook protein [Bacillus cereus AH187]
 gi|228644991|gb|EEL01234.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST26]
          Length = 407

 Score = 40.3 bits (94), Expect = 0.093,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 17/90 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +    +
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNS---I 50

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G D       +   +P +  +G VK  
Sbjct: 51 GAKGDD------RYAGTNPKSIGNG-VKMS 73



 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 85  NASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 354 NGAGKVRGSAQEGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|146281777|ref|YP_001171930.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri
          A1501]
 gi|145569982|gb|ABP79088.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri
          A1501]
          Length = 669

 Score = 40.3 bits (94), Expect = 0.093,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 7/74 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +   I  SGL+     +     NIAN  T G       Y R+++  +       GV  
Sbjct: 1  MASLISIGLSGLSASQTALATTGNNIANVDTAG-------YSRQSVVQKSASAEFIGVGY 53

Query: 64 KKIGVDQSTFVEEF 77
             G   +     +
Sbjct: 54 VGNGTTVADVRRIY 67


>gi|56421867|ref|YP_149185.1| flagellar basal-body rod protein [Geobacillus kaustophilus
          HTA426]
 gi|56381709|dbj|BAD77617.1| flagellar basal-body rod protein [Geobacillus kaustophilus
          HTA426]
          Length = 276

 Score = 40.3 bits (94), Expect = 0.093,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A SG+  Q  R+  ++ N+ANA T G    +   R 
Sbjct: 1  MLRGLYTAASGMLAQERRVDWLTNNLANAETPGYKADAAAMRA 43



 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 10/64 (15%)

Query: 80  GHPVANASGIVKY---------PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL- 129
             P+  A G V Y          NV++     D+    R + AN + ++     +   + 
Sbjct: 211 TGPLPQAPGNVTYTVKQRFLERSNVDIERTMTDLLAAYRAFEANQKIVQAYDRSLDKAVN 270

Query: 130 DLLR 133
           ++ R
Sbjct: 271 EVGR 274


>gi|315125981|ref|YP_004067984.1| LfgB [Pseudoalteromonas sp. SM9913]
 gi|315014495|gb|ADT67833.1| LfgB [Pseudoalteromonas sp. SM9913]
          Length = 124

 Score = 40.3 bits (94), Expect = 0.095,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 12/103 (11%)

Query: 20  ARMQ---IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
            R+    II+ N+AN  T G       YR+   S       +  V    +  D+  +   
Sbjct: 17  LRLDRAEIIASNLANVDTPGFKSRDVDYRQIMQSVSSSFSQNRDVDFAGVQTDELKYRVP 76

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           + P      + G      V + +E A     +  +  +L  + 
Sbjct: 77  YQPS-----SDGN----TVELNIEQAKFASNSMDFQTSLTFLN 110


>gi|297568486|ref|YP_003689830.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924401|gb|ADH85211.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 636

 Score = 40.3 bits (94), Expect = 0.095,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 24/41 (58%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  + AD+  T R++ AN ++I  + ++  T + L
Sbjct: 595 EGSNVDLARQFADLTMTQRIFQANSKSITTADEIHQTLMRL 635


>gi|531461|gb|AAA67879.1| orfF [Bacillus subtilis subsp. subtilis str. 168]
          Length = 271

 Score = 40.3 bits (94), Expect = 0.095,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++   + A S +  Q  R +++S NIANA T+G        R 
Sbjct: 1  MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRA 43



 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
            NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 229 SNVDVTSAYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 270


>gi|328545575|ref|YP_004305684.1| FlgE protein [polymorphum gilvum SL003B-26A1]
 gi|326415316|gb|ADZ72379.1| FlgE protein [Polymorphum gilvum SL003B-26A1]
          Length = 418

 Score = 40.3 bits (94), Expect = 0.096,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L+ + + A S L  QS  +  +S N+AN++TT        Y+  + SF  ++ G+
Sbjct: 3  LMGALNSAISSLYAQSQALSNVSSNLANSQTTA-------YKASSTSFTSLVAGT 50



 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++    +   E + M    + Y A  Q +  S++M  + +  +R
Sbjct: 373 GYLEASTTDTSTEFSRMLTAQQAYSAASQILSASNEMFQSLMQAVR 418


>gi|330945585|gb|EGH47092.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 153

 Score = 40.3 bits (94), Expect = 0.097,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
            SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 104 ESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 153


>gi|303240172|ref|ZP_07326692.1| flagellar hook-associated protein FlgK [Acetivibrio
          cellulolyticus CD2]
 gi|302592263|gb|EFL61991.1| flagellar hook-associated protein FlgK [Acetivibrio
          cellulolyticus CD2]
          Length = 689

 Score = 40.3 bits (94), Expect = 0.097,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M    AS  IA SG+ V    + +   NIAN  T G       Y R+          +
Sbjct: 1  MSVGFASFEIARSGMTVNERALSVTGHNIANVNTAG-------YVRQQAIISSGPMQN 51


>gi|308173580|ref|YP_003920285.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens DSM 7]
 gi|307606444|emb|CBI42815.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens DSM 7]
 gi|328911721|gb|AEB63317.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens LL3]
          Length = 129

 Score = 40.3 bits (94), Expect = 0.100,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 18/103 (17%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG----VRVKKIGVDQSTFVEEFD- 78
           +I+ NIAN  T         Y+ K +SF  ++         V+     VD +    ++  
Sbjct: 24  VITNNIANIDTPN-------YKAKKVSFRNLLDQETSNLEAVKTDYRHVDFTDSGADYSI 76

Query: 79  --PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
              G      +G     NV++  E  D+ E    Y A ++ + 
Sbjct: 77  VSSGDTSYQQNGN----NVDIDKEMTDLAENQINYQALVERMS 115


>gi|296274028|ref|YP_003656659.1| flagellar basal-body rod protein FlgB [Arcobacter nitrofigilis DSM
           7299]
 gi|296098202|gb|ADG94152.1| flagellar basal-body rod protein FlgB [Arcobacter nitrofigilis DSM
           7299]
          Length = 135

 Score = 40.3 bits (94), Expect = 0.100,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 25/110 (22%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV------- 68
             +  +  +IS NIAN  T    P    Y+ K +SFE  +      +  ++         
Sbjct: 17  RAERQK--VISSNIANINT----PD---YKTKDLSFESQLQEKNRQKDLQLITTNQNHIK 67

Query: 69  -----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                D++  +E ++  +      G     NVN+  + ++M + N ++ A
Sbjct: 68  SKENNDKNPRMEVYEVENLQEQNDGN----NVNLDTQMSEMAKNNTMFQA 113


>gi|332296509|ref|YP_004438432.1| flagellar hook-associated protein FlgK [Thermodesulfobium
          narugense DSM 14796]
 gi|332179612|gb|AEE15301.1| flagellar hook-associated protein FlgK [Thermodesulfobium
          narugense DSM 14796]
          Length = 936

 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 7/47 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
               IA S LA     M +   N+ANA T         Y R++  F
Sbjct: 7  FLGLQIAQSALASNQLAMDVTGHNVANANTAS-------YSRQSPVF 46



 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 17/36 (47%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V++  E  ++ +    Y A+ + I   + M+   ++
Sbjct: 898 VSMDEEMTNLIQYQTAYSASARVINAINSMLDKLIN 933


>gi|289606849|emb|CBI60984.1| unnamed protein product [Sordaria macrospora]
          Length = 336

 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 13/72 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +     I  SG+    + +   S+NIANA TTG       Y R+T S  EV  GS     
Sbjct: 40  MSDLLSIGASGVRAYQSALTTTSDNIANAGTTG-------YVRRTTSLAEVGVGSSRQIT 92

Query: 59  -GGVRVKKIGVD 69
             GV V  +   
Sbjct: 93  GSGVTVTGVARS 104


>gi|197104253|ref|YP_002129630.1| flagellar hook protein FlgE [Phenylobacterium zucineum HLK1]
 gi|196477673|gb|ACG77201.1| flagellar hook protein FlgE [Phenylobacterium zucineum HLK1]
          Length = 452

 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 15/58 (25%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------HGSGGVR 62
          SGL   S+ +  IS+NIAN  T         Y+R  ++F  V+        + +GGV+
Sbjct: 6  SGLVANSSALAAISDNIANVNTVA-------YKRNQVNFANVVTAQAVKGKYSAGGVQ 56



 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E   +  T + Y A+ + I  +  M+   +++ R
Sbjct: 410 EASTVDLSAEFTGLIATQKAYSASSKIITTADQMLEELINIKR 452


>gi|188997546|ref|YP_001931797.1| flagellar basal-body rod protein FlgB [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932613|gb|ACD67243.1| flagellar basal-body rod protein FlgB [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 122

 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 23/118 (19%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R ++I  NIANA T         Y+   ++FEEV++       + +         + +P 
Sbjct: 18  RTKVIQGNIANANT-------PFYKPVDLTFEEVLN------YQTVLKTTDERHIQPEPN 64

Query: 81  H-----PVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     P  N   +G      VNV  E A + E++ +Y + ++ +K   ++    L +
Sbjct: 65  NFIKIKPYQNGIITGY-DQNKVNVEEEMAKLAESSIMYKSLVEVMK--KELSKMKLAI 119


>gi|15642858|ref|NP_227899.1| flagellar hook-associated protein 1 [Thermotoga maritima MSB8]
 gi|4980572|gb|AAD35177.1|AE001695_3 flagellar hook-associated protein 1 [Thermotoga maritima MSB8]
          Length = 858

 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 27/79 (34%), Gaps = 21/79 (26%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--------- 54
          +    + A +G+      M I+  NIANA     TPG   Y R+    E           
Sbjct: 6  MFGILNTALTGIHAHKLAMNIVGHNIANA----STPG---YSRQRPVIEANPPIPLTTLT 58

Query: 55 -----MHGSGGVRVKKIGV 68
               +    G RVK I  
Sbjct: 59 QPSFPLQMGTGARVKTIVR 77



 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V++  E A+M E    + A  + I     M+ T +++
Sbjct: 820 VSLDEEMANMIEYQHAFSAAAKVITAVDQMIQTVINM 856


>gi|56419751|ref|YP_147069.1| flagellar basal body rod protein FlgB [Geobacillus kaustophilus
          HTA426]
 gi|297530609|ref|YP_003671884.1| flagellar basal-body rod protein FlgB [Geobacillus sp. C56-T3]
 gi|56379593|dbj|BAD75501.1| flagellar basal-body rod protein [Geobacillus kaustophilus
          HTA426]
 gi|297253861|gb|ADI27307.1| flagellar basal-body rod protein FlgB [Geobacillus sp. C56-T3]
          Length = 129

 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          GL   + R Q I++NIANA T G       Y+ K + F+  +  +
Sbjct: 14 GLRYAALRQQAIADNIANADTPG-------YKAKDVRFQAELERA 51


>gi|315127347|ref|YP_004069350.1| flagellar hook-associated [Pseudoalteromonas sp. SM9913]
 gi|315015861|gb|ADT69199.1| flagellar hook-associated [Pseudoalteromonas sp. SM9913]
          Length = 668

 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
              +IANSG+   S  +Q  S+NIAN  T G       Y R+   F  ++    G
Sbjct: 3  FNLLNIANSGIRANSELLQTTSKNIANVNTEG-------YVRERTEFTTMIDNQVG 51



 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 VN+  E A++    + Y A+ Q +  +  +  T L   R
Sbjct: 624 YESLSGVNLDEEAANLLRFQQSYAASAQVLSAARSIFDTLLSAAR 668


>gi|258511381|ref|YP_003184815.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
          subsp. acidocaldarius DSM 446]
 gi|257478107|gb|ACV58426.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
          subsp. acidocaldarius DSM 446]
          Length = 335

 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S + A SG+      + ++  NIAN  T G
Sbjct: 1  MLRSMNSAISGMQAFQTDLDVVGNNIANVETVG 33



 Score = 37.6 bits (87), Expect = 0.65,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ASG ++  NV++  + A+M      Y+AN   I   + ++   +++
Sbjct: 287 ASGELEGSNVDLSQQFAEMIVAQNAYVANTHMIGTDNAILQALVNM 332


>gi|218531221|ref|YP_002422037.1| flagellar basal body rod protein FlgF [Methylobacterium
          chloromethanicum CM4]
 gi|218523524|gb|ACK84109.1| flagellar basal body rod protein [Methylobacterium
          chloromethanicum CM4]
          Length = 246

 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 10/95 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +  +  S     +  + +I+ N+AN  TTG       ++ ++  F+E +        
Sbjct: 1  MQNALFVGVSAQTALARELDVIANNMANVSTTG-------FKARSARFQEYLMPVASA-- 51

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
                        D G P+    G V+ P+ N +
Sbjct: 52 DSFQRTDRRLSYVIDQGTPLDLTQGPVE-PDSNPM 85


>gi|289208115|ref|YP_003460181.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp. K90mix]
 gi|288943746|gb|ADC71445.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp. K90mix]
          Length = 246

 Score = 39.9 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 82  PVANA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           P A     SG+++  NVN +     M E +R +   ++ +  ++ +  ++  LL
Sbjct: 190 PDAEVRVVSGMLEGSNVNTVEALTRMIELSRHFEMQVKMMDSANTLEQSSNRLL 243


>gi|326404070|ref|YP_004284152.1| flagellar basal-body rod protein FlgF [Acidiphilium multivorum
           AIU301]
 gi|325050932|dbj|BAJ81270.1| flagellar basal-body rod protein FlgF [Acidiphilium multivorum
           AIU301]
          Length = 247

 Score = 39.9 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            G ++  NV  +VE  +M + +R Y    Q +    +   T +
Sbjct: 196 QGAIEESNVQPVVEITNMIQASRNYEMLAQFLASEKNRSQTAI 238


>gi|238782789|ref|ZP_04626818.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
           43970]
 gi|238716212|gb|EEQ08195.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
           43970]
          Length = 135

 Score = 39.9 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 48/143 (33%), Gaps = 31/143 (21%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           +D L  +       L + + R  I++ NIAN  T G       Y  + I F + +  +  
Sbjct: 2   IDKLDNAFRFQQDALRLLTQRQDILASNIANVDTPG-------YLARDIDFSQQLKTAVD 54

Query: 59  --------------GGVRVKKIGVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETAD 103
                          G  +  +    +     +  P  P A+ +       V++  E  +
Sbjct: 55  RSAPEKGSLSLGLTSGAHIAGMKSRMNDSQLLYRIPDQPSADGN------TVDMDRERIN 108

Query: 104 MRETNRLYMANLQTIKQS-HDMM 125
             + +  Y ++L  +      MM
Sbjct: 109 FADNSMKYQSSLTILSTQIKSMM 131


>gi|238758113|ref|ZP_04619293.1| Flagellar basal-body rod protein flgB [Yersinia aldovae ATCC 35236]
 gi|238703651|gb|EEP96188.1| Flagellar basal-body rod protein flgB [Yersinia aldovae ATCC 35236]
          Length = 137

 Score = 39.9 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 46/129 (35%), Gaps = 27/129 (20%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQST 72
            L ++S R +++S NIANA T G       ++ + I F   +       RV   GV  S 
Sbjct: 15  ALNLRSQRQEVLSSNIANADTPG-------FQARDIDFSSQLKKVMEQGRVNGTGVSLSL 67

Query: 73  FVEEFDPGH-------------PVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
                 P               P   A  G      V++  E  +  + +  Y  +L  +
Sbjct: 68  TSARHIPASTVQPPDLDLLFRVPDQPAMDGN----TVDMDRERTNFADNSLKYQTSLTVL 123

Query: 119 -KQSHDMMT 126
             Q   MM+
Sbjct: 124 GSQIKGMMS 132


>gi|258513988|ref|YP_003190210.1| flagellar hook-associated protein FlgK [Desulfotomaculum
          acetoxidans DSM 771]
 gi|257777693|gb|ACV61587.1| flagellar hook-associated protein FlgK [Desulfotomaculum
          acetoxidans DSM 771]
          Length = 430

 Score = 39.9 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 24/75 (32%), Gaps = 14/75 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
          M        I    L      M +   N+ANA TTG       Y R+ ++       +G 
Sbjct: 1  MSGTFFGLEIGKRALQANKTGMDVTGNNVANANTTG-------YSRQRVNLVTGPPYTGS 53

Query: 60 ------GVRVKKIGV 68
                GV V  I  
Sbjct: 54 GYQLGTGVNVGDIER 68



 Score = 36.8 bits (85), Expect = 0.97,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E  ++ +    Y A  + I     M+ T L ++R
Sbjct: 390 SGVSIEEEMTNLLQYQYGYQAASKIITTIDQMLETLLGIIR 430


>gi|16125154|ref|NP_419718.1| flagellar hook protein [Caulobacter crescentus CB15]
 gi|221233884|ref|YP_002516320.1| flagellar hook protein FlgE [Caulobacter crescentus NA1000]
 gi|6226612|sp|P35806|FLGE_CAUCR RecName: Full=Flagellar hook protein flgE
 gi|3493243|gb|AAC33329.1| flagellar hook protein [Caulobacter crescentus CB15]
 gi|13422168|gb|AAK22886.1| flagellar hook protein [Caulobacter crescentus CB15]
 gi|220963056|gb|ACL94412.1| flagellar hook protein FlgE [Caulobacter crescentus NA1000]
          Length = 591

 Score = 39.9 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E   +  T R Y A+ + I  +  M+   L++ R
Sbjct: 549 EASTVDLSQEFTGLITTQRAYSASSKIITTADQMLEELLNIKR 591



 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 15/60 (25%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------HGSGGVRVK 64
          SGL   S+ +  IS+NIAN  T G       ++R T +F  ++        + +GGV+ +
Sbjct: 12 SGLIANSSALAAISDNIANVNTVG-------FKRSTSNFSTLVTSGNKNQTYSAGGVKAQ 64


>gi|284007174|emb|CBA72458.1| flagellar basal body rod protein FlgF [Arsenophonus nasoniae]
          Length = 248

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN      DM    R +   ++ I  ++D       LL
Sbjct: 200 SGVLEGSNVNPAQAMVDMIANARTFEMQMKVIHSANDNAQRANQLL 245


>gi|39936993|ref|NP_949269.1| flagellar hook protein flgE [Rhodopseudomonas palustris CGA009]
 gi|192292821|ref|YP_001993426.1| hypothetical protein Rpal_4455 [Rhodopseudomonas palustris TIE-1]
 gi|39650850|emb|CAE29373.1| probable flagellar hook protein flgE [Rhodopseudomonas palustris
           CGA009]
 gi|192286570|gb|ACF02951.1| protein of unknown function DUF1078 domain protein
           [Rhodopseudomonas palustris TIE-1]
          Length = 598

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N ++  E   +  T + Y AN + I  ++ M+   L+++R
Sbjct: 559 NTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLNVMR 598


>gi|330961200|gb|EGH61460.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 246

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 6/60 (10%)

Query: 79  PGHPVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
           P    A     SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 187 PADVDATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|296274021|ref|YP_003656652.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM
          7299]
 gi|296098195|gb|ADG94145.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM
          7299]
          Length = 783

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 10/63 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKKIGVD 69
          SGL+ Q   +   S NIAN  T G       Y+   ISF + M+      G +V+     
Sbjct: 10 SGLSAQQKALDNESHNIANVNTIG-------YKASRISFADQMYQDKIGKGAKVQDAEKI 62

Query: 70 QST 72
           + 
Sbjct: 63 YTP 65



 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G ++    N+     ++    R + AN ++I  +  ++TT + L R
Sbjct: 736 AGGNLELSGANLSESLVNLMVFQRAFEANAKSITTADALLTTLIQLKR 783


>gi|254720629|ref|ZP_05182440.1| flagellar basal body rod protein FlgF [Brucella sp. 83/13]
 gi|265985673|ref|ZP_06098408.1| flagellar basal body rod protein FlgF [Brucella sp. 83/13]
 gi|306837353|ref|ZP_07470232.1| flagellar basal body rod protein FlgF [Brucella sp. NF 2653]
 gi|264664265|gb|EEZ34526.1| flagellar basal body rod protein FlgF [Brucella sp. 83/13]
 gi|306407545|gb|EFM63745.1| flagellar basal body rod protein FlgF [Brucella sp. NF 2653]
          Length = 243

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 25/95 (26%)

Query: 58  SGGVRVKKIG--VDQSTFVEEF---------DPGHPVANAS------GIVKYPNVNVLVE 100
             GV+V  IG     +     +          P  PV + +      G+++  NV+ + E
Sbjct: 147 QNGVQVGAIGLYTIPADADLAYAGTSGVIPSKPAQPVVDDNSVGVVQGMIEGSNVDAMTE 206

Query: 101 TADMRETNRLYM--ANL------QTIKQSHDMMTT 127
              +   +R +    NL         +    + + 
Sbjct: 207 MTRLISISRAFEQVNNLLSQQEATVSEAIKTLGSK 241


>gi|302874613|ref|YP_003843246.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
 gi|307690776|ref|ZP_07633222.1| flagellar basal body rod protein FlgG [Clostridium cellulovorans
          743B]
 gi|302577470|gb|ADL51482.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
          Length = 254

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I + + + SG+  + ARM  IS N+ANA T G
Sbjct: 1  MIRALYTSLSGMISKEARMNSISNNLANANTVG 33



 Score = 38.0 bits (88), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 77  FDPGHPVANASGIVK-----YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  G+P A     VK       NVNV+    +M    R +  N + I+   + +  +++
Sbjct: 190 YSGGNPTAATKFNVKQRALEKSNVNVVNGMIEMMSVYREFETNQKVIQTLDETLGKSVN 248


>gi|289208111|ref|YP_003460177.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
          K90mix]
 gi|288943742|gb|ADC71441.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
          K90mix]
          Length = 136

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L  +  I    + V++ RM++++ NIANA T         Y+ + I F  V+  + G
Sbjct: 5  LDKAMGILPEAVNVRAKRMELLASNIANADTPN-------YKARDIDFRSVLQAAAG 54


>gi|254511352|ref|ZP_05123419.1| flagellar hook protein FlgE [Rhodobacteraceae bacterium KLH11]
 gi|221535063|gb|EEE38051.1| flagellar hook protein FlgE [Rhodobacteraceae bacterium KLH11]
          Length = 439

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +V  E   M +T R Y ++ + I+   +M+  T ++ R
Sbjct: 402 DVATELTSMIQTQRAYSSSAKVIQTVDEMLQETTNIKR 439



 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +S +   + L   + R+  IS+NIAN+ T G       +     S +   + +GGVR 
Sbjct: 11 ISSSLNAGVAALKANANRLATISDNIANSSTFGYKRVETDFHSMVTSGQGGSYSAGGVRT 70

Query: 64 KK 65
            
Sbjct: 71 TS 72


>gi|222112269|ref|YP_002554533.1| flagellar basal-body rod protein flgb [Acidovorax ebreus TPSY]
 gi|221731713|gb|ACM34533.1| flagellar basal-body rod protein FlgB [Acidovorax ebreus TPSY]
          Length = 138

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 48/145 (33%), Gaps = 32/145 (22%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D +        S L ++S R + I+ NIANA T G       Y  +   F + M      
Sbjct: 3   DKMTNRLDFHGSALLLRSERQRAIASNIANADTPG-------YVARDFKFADAMRAVNEA 55

Query: 62  RVKKIGVDQSTFV--EEFDPGH---PVANAS------GIVKYPN-------VNVLVETAD 103
                  + S        DP H   P A +       G             V++  E A 
Sbjct: 56  H------NPSPLRSQSVSDPRHIPLPAAASGSSDSTLGYALQTQPSLDNNTVDMDRERAA 109

Query: 104 MRETNRLYMANLQTIK-QSHDMMTT 127
             +    Y A L+ I  QS  M++ 
Sbjct: 110 FVDNAVRYEATLRFINGQSKTMLSA 134


>gi|158604896|gb|ABW74721.1| flagellar hook protein [Campylobacter concisus 13826]
          Length = 533

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 23/41 (56%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++    +++  T + Y A+ ++I  S +M+ T + +
Sbjct: 491 EMSNVDLGQALSEVIVTQKAYEASAKSITTSDEMIQTAIQM 531


>gi|254973935|ref|ZP_05270407.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-66c26]
 gi|255091321|ref|ZP_05320799.1| flagellar basal body rod protein FlgG [Clostridium difficile CIP
           107932]
 gi|255312979|ref|ZP_05354562.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-76w55]
 gi|255515738|ref|ZP_05383414.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-97b34]
 gi|255648832|ref|ZP_05395734.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-37x79]
 gi|260682049|ref|YP_003213334.1| flagellar basal body rod protein FlgG [Clostridium difficile CD196]
 gi|260685647|ref|YP_003216780.1| flagellar basal body rod protein FlgG [Clostridium difficile
           R20291]
 gi|306518946|ref|ZP_07405293.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-32g58]
 gi|260208212|emb|CBA60569.1| flagellar basal-body rod protein FlgG [Clostridium difficile CD196]
 gi|260211663|emb|CBE01931.1| flagellar basal-body rod protein FlgG [Clostridium difficile
           R20291]
          Length = 257

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV+++ E  +M   +R Y AN + I+     +  
Sbjct: 211 IESSNVDMVSEINNMMTISREYEANQKIIQAMDSKLAK 248


>gi|331269338|ref|YP_004395830.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
 gi|329125888|gb|AEB75833.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
          Length = 263

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +  NVNV+ E +DM  T R + +N + ++   + +  T+ ++ R
Sbjct: 219 EKSNVNVMAEVSDMMMTMRNFESNQKIVQALDETLGKTVNEVGR 262


>gi|313497768|gb|ADR59134.1| FlgK [Pseudomonas putida BIRD-1]
          Length = 680

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +   I  SGL+   A + + S NIANA T+G       Y R+          + G   
Sbjct: 1  MSSLISIGLSGLSASQAALSVTSNNIANAATSG-------YSRQQTVQAAGPSHNIGAGF 53

Query: 64 KKIGVDQSTFVEEF 77
             G   +     +
Sbjct: 54 LGTGTTLADVRRIY 67


>gi|229029434|ref|ZP_04185517.1| Flagellar hook protein flgE [Bacillus cereus AH1271]
 gi|228731893|gb|EEL82792.1| Flagellar hook protein flgE [Bacillus cereus AH1271]
          Length = 409

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 17/90 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +     
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNN----- 48

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
            IG   S    ++   +P +  +G VK  
Sbjct: 49 -SIG---SKGDNKYAGTNPKSIGNG-VKMS 73



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 370 NVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 409


>gi|229096239|ref|ZP_04227212.1| Flagellar hook protein flgE [Bacillus cereus Rock3-29]
 gi|228687199|gb|EEL41104.1| Flagellar hook protein flgE [Bacillus cereus Rock3-29]
          Length = 407

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 41/91 (45%), Gaps = 19/91 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVR 62
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +  G +
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNSIGAK 53

Query: 63 VKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                       ++   +P +  +G VK  
Sbjct: 54 SDG----------KYAGTNPKSIGNG-VKMS 73



 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ +E  D+    R +  N + IK S +++   ++L+R
Sbjct: 368 NVDLSIEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407


>gi|261419416|ref|YP_003253098.1| flagellar basal body rod protein FlgB [Geobacillus sp. Y412MC61]
 gi|319766231|ref|YP_004131732.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC52]
 gi|261375873|gb|ACX78616.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC61]
 gi|317111097|gb|ADU93589.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC52]
          Length = 129

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          GL   + R Q I++NIANA T G       Y+ K + F+  +  +
Sbjct: 14 GLRYAALRQQAIADNIANADTPG-------YKAKDVRFQSELERA 51


>gi|117919769|ref|YP_868961.1| flagellar basal body rod protein FlgB [Shewanella sp. ANA-3]
 gi|117612101|gb|ABK47555.1| flagellar basal-body rod protein FlgB [Shewanella sp. ANA-3]
          Length = 134

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 9/43 (20%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          G+  + A  ++IS NIANA T         Y+ + + F   ++
Sbjct: 17 GIRAERA--EVISSNIANADTPH-------YKARDVDFSAALN 50


>gi|332704817|ref|ZP_08424905.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus
          str. Walvis Bay]
 gi|332554966|gb|EGJ52010.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus
          str. Walvis Bay]
          Length = 725

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 25/96 (26%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
          M  +     IA  GL    A +++  +NI+N  T G       Y R+ +  EE +     
Sbjct: 1  MSGINNIMDIARKGLFASQAAIEVTGQNISNVNTVG-------YSRRYVRLEESLQLDYR 53

Query: 58 ----SGGVRVKKIGV-----------DQSTFVEEFD 78
                GV   ++             D+ST  + +D
Sbjct: 54 PGQIGMGVEAAEVLRHFDRFIETNYLDKSTMQQRYD 89



 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVA---NASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           V  +G D S+    F   + +A   +A        VN+  E +++ +    Y A  + I 
Sbjct: 653 VSSVGGDTSSAQFNFSYQNSLAQDLDAQQQ-SLSGVNLDEEMSNLIKFQHSYTAAAKLIS 711

Query: 120 QSHDMMTTTLDL 131
            +  M+ T L L
Sbjct: 712 TADQMLQTLLGL 723


>gi|206970889|ref|ZP_03231841.1| flagellar hook protein FlgE [Bacillus cereus AH1134]
 gi|228920464|ref|ZP_04083809.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
 gi|229178162|ref|ZP_04305533.1| Flagellar hook protein flgE [Bacillus cereus 172560W]
 gi|206734525|gb|EDZ51695.1| flagellar hook protein FlgE [Bacillus cereus AH1134]
 gi|228605292|gb|EEK62742.1| Flagellar hook protein flgE [Bacillus cereus 172560W]
 gi|228839094|gb|EEM84390.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
          Length = 407

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 41/91 (45%), Gaps = 19/91 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVR 62
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +  G +
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNSIGAK 53

Query: 63 VKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                       ++   +P +  +G VK  
Sbjct: 54 GDG----------KYAGTNPKSIGNG-VKMS 73



 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 368 NVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407


>gi|27381995|ref|NP_773524.1| flagellar basal body rod protein FlgF [Bradyrhizobium japonicum
          USDA 110]
 gi|27355165|dbj|BAC52149.1| flagellar basal body rod protein [Bradyrhizobium japonicum USDA
          110]
          Length = 242

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 10/54 (18%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          GL+ Q     R+Q I+ N+AN  T         +R   + FE V+  +G   V 
Sbjct: 8  GLSAQVALEKRLQTIANNVANVNTAA-------FRTDVVKFETVLSKAGANPVA 54



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G V+    N ++E   +   +R +      I+ +   +   +  L
Sbjct: 191 KQGYVEGSGANPMMELTKLMAASRAFDGTNSMIEGTESSLQNAIRTL 237


>gi|16126302|ref|NP_420866.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus CB15]
 gi|221235079|ref|YP_002517515.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus
           NA1000]
 gi|13637950|sp|Q06171|FLGF_CAUCR RecName: Full=Flagellar basal-body rod protein flgF
 gi|13423542|gb|AAK24034.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus CB15]
 gi|220964251|gb|ACL95607.1| flagellar basal-body rod protein flgF [Caulobacter crescentus
           NA1000]
          Length = 245

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 22/44 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G+++  NV  ++E   + E  R Y +  + +  + ++  + ++
Sbjct: 196 QGMLEASNVQPVIEITKLIEIQRAYESVAKMMDNTAELSRSAVE 239



 Score = 36.4 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          GL+ Q      + I++ NIANA TTG        R +     + + GS  V+
Sbjct: 8  GLSRQMTLRRELDIVANNIANANTTGFKVEDLMVRTEQAKPAKTLDGSSPVK 59


>gi|148256791|ref|YP_001241376.1| flagellar basal body rod protein FlgF [Bradyrhizobium sp. BTAi1]
 gi|146408964|gb|ABQ37470.1| putative flagellar basal-body rod protein (flgF or flgG)
           [Bradyrhizobium sp. BTAi1]
          Length = 254

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV+ + E + M E  R Y      ++   DM    ++
Sbjct: 203 QQGYIEKSNVSAVGEMSRMVEVMRSYTQVANMLQVQSDMRKNAIE 247


>gi|295097206|emb|CBK86296.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 136

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 18/137 (13%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M+ L  +       L + S R ++++ NIANA T G       Y+ + I F + +  + G
Sbjct: 2   MNKLDDAFRFQQQALGLLSRRQEVLASNIANADTPG-------YQARDIDFSQQLKNALG 54

Query: 61  VRVKKIGVDQSTFVEEFDPGH--PVANASGIVKYPN--------VNVLVETADMRETNRL 110
            +     V  +    +   G   P  +A  + + P+        V++  E  +  +    
Sbjct: 55  NKPASGPVTMALTSSKHMQGKKMPFDDAQLLYRVPDQPSADGNTVDMDRERVNFADNAMK 114

Query: 111 YMANLQTIKQ-SHDMMT 126
           Y ++L  +      MMT
Sbjct: 115 YQSSLTFLGADIKKMMT 131


>gi|317129212|ref|YP_004095494.1| flagellar basal-body rod protein FlgB [Bacillus cellulosilyticus
           DSM 2522]
 gi|315474160|gb|ADU30763.1| flagellar basal-body rod protein FlgB [Bacillus cellulosilyticus
           DSM 2522]
          Length = 134

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 22/103 (21%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVD-- 69
           + L+    R   I++NIAN  T         Y+ K   F   ++ +    R+     D  
Sbjct: 14  TALSASMTRHNTIAQNIANVDTPN-------YKAKKAVFSHELNSAMNNQRLAANRTDAR 66

Query: 70  --------QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                    +  V+  +  +   N +G     NV+V +E A++
Sbjct: 67  HIEFSSRNSTDEVQVIERNNTQYNHNGN----NVDVDLEMAEL 105


>gi|229069305|ref|ZP_04202595.1| Flagellar hook protein flgE [Bacillus cereus F65185]
 gi|229078936|ref|ZP_04211488.1| Flagellar hook protein flgE [Bacillus cereus Rock4-2]
 gi|228704350|gb|EEL56784.1| Flagellar hook protein flgE [Bacillus cereus Rock4-2]
 gi|228713792|gb|EEL65677.1| Flagellar hook protein flgE [Bacillus cereus F65185]
          Length = 407

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 26/88 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +     
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNSIGAK 53

Query: 59 --------------GGVRVKKIGVDQST 72
                         GV++     D S 
Sbjct: 54 GDGKYAGTNPKSIGNGVKMSGTVTDYSD 81



 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 368 NVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407


>gi|163939559|ref|YP_001644443.1| flagellar hook protein FlgE [Bacillus weihenstephanensis KBAB4]
 gi|163861756|gb|ABY42815.1| protein of unknown function DUF1078 domain protein [Bacillus
          weihenstephanensis KBAB4]
          Length = 407

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 26/88 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +     
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNSIGAK 53

Query: 59 --------------GGVRVKKIGVDQST 72
                         GV++     D S 
Sbjct: 54 GDGKYAGTNPKSIGNGVKMSGTVTDYSD 81



 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 368 NVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|330502734|ref|YP_004379603.1| flagellar hook protein FlgE [Pseudomonas mendocina NK-01]
 gi|328917020|gb|AEB57851.1| flagellar hook protein FlgE [Pseudomonas mendocina NK-01]
          Length = 456

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  +G ++  NV +  +  ++    R Y AN +TI+    +  T ++L
Sbjct: 408 ALQAGALEDSNVELSDQLVNLIVAQRNYQANAKTIETESAITQTIINL 455



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   ++ + +   NIANA T G
Sbjct: 2  SFNIGLSGLRAATSDLNVTGNNIANAGTAG 31


>gi|218235227|ref|YP_002366439.1| flagellar hook protein FlgE [Bacillus cereus B4264]
 gi|228907387|ref|ZP_04071245.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 200]
 gi|228938867|ref|ZP_04101467.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
          berliner ATCC 10792]
 gi|228964737|ref|ZP_04125844.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar sotto
          str. T04001]
 gi|228971748|ref|ZP_04132369.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228978357|ref|ZP_04138734.1| Flagellar hook protein flgE [Bacillus thuringiensis Bt407]
 gi|218163184|gb|ACK63176.1| flagellar hook protein [Bacillus cereus B4264]
 gi|228781374|gb|EEM29575.1| Flagellar hook protein flgE [Bacillus thuringiensis Bt407]
 gi|228787838|gb|EEM35796.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228794987|gb|EEM42486.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar sotto
          str. T04001]
 gi|228820716|gb|EEM66741.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
          berliner ATCC 10792]
 gi|228852248|gb|EEM97044.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 200]
 gi|326939367|gb|AEA15263.1| flagellar hook protein FlgE [Bacillus thuringiensis serovar
          chinensis CT-43]
          Length = 407

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 26/88 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +     
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNSIGAK 53

Query: 59 --------------GGVRVKKIGVDQST 72
                         GV++     D S 
Sbjct: 54 GDGKYAGTNPKSIGNGVKMSGTVTDYSD 81



 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 368 NVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407


>gi|126697840|ref|YP_001086737.1| flagellar basal body rod protein FlgG [Clostridium difficile 630]
 gi|115249277|emb|CAJ67090.1| Flagellar hook-basal body complex protein FlgG1 [Clostridium
           difficile]
          Length = 257

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV+++ E  +M   +R Y AN + I+     +  
Sbjct: 211 IESSNVDMVSEINNMMTISREYEANQKIIQAMDSKLAK 248



 Score = 33.7 bits (77), Expect = 8.1,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 15/77 (19%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---SFEEV-----M 55
          +I   +IA S +     +  ++  N+AN  T G       Y+ K +   SF+E+      
Sbjct: 1  MIRGLYIAVSAMITNQQKQNVVVNNLANMDTNG-------YKSKQLLTKSFDELKLEGYN 53

Query: 56 HGSGGVRVKKIGVDQST 72
          + + G + K+I  D S 
Sbjct: 54 NYANGTKQKQIIGDISP 70


>gi|149194904|ref|ZP_01871998.1| flagellar hook-associated protein [Caminibacter mediatlanticus
           TB-2]
 gi|149135063|gb|EDM23545.1| flagellar hook-associated protein [Caminibacter mediatlanticus
           TB-2]
          Length = 717

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                 VN+  E  ++ +  R Y AN + I   + M+     +
Sbjct: 673 YYSISGVNIDEELINLEKFQRGYQANAKVITTINQMLDALFGI 715



 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 14/78 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
          + +S   A SGL      +Q  S NI+NA      P    Y R+   F  +         
Sbjct: 3  ISSSLSTALSGLNAHQTAIQTTSNNISNA----SNPD---YVRERAVFSTLPPINSIPGD 55

Query: 57 GSGGVRVKKIGVDQSTFV 74
             GV + KI     TFV
Sbjct: 56 IGTGVNISKIYRITDTFV 73


>gi|33592476|ref|NP_880120.1| flagellar basal body rod protein FlgB [Bordetella pertussis
          Tohama I]
 gi|33572122|emb|CAE41664.1| flagellar basal-body rod protein FlgB [Bordetella pertussis
          Tohama I]
 gi|332381893|gb|AEE66740.1| flagellar basal body rod protein FlgB [Bordetella pertussis CS]
          Length = 135

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 9/45 (20%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L  Q    +++S NIANA T         Y+ +   F+  M G+
Sbjct: 17 ALRAQRQ--EVLSSNIANADTPN-------YKARDFDFKAAMQGA 52


>gi|218896686|ref|YP_002445097.1| flagellar hook protein [Bacillus cereus G9842]
 gi|228900335|ref|ZP_04064565.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 4222]
 gi|218545583|gb|ACK97977.1| flagellar hook protein [Bacillus cereus G9842]
 gi|228859370|gb|EEN03800.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 4222]
          Length = 407

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 41/91 (45%), Gaps = 19/91 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVR 62
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +  G +
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNSIGAK 53

Query: 63 VKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                       ++   +P +  +G VK  
Sbjct: 54 GDG----------KYAGTNPKSIGNG-VKMS 73



 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 368 NVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407


>gi|26991070|ref|NP_746495.1| flagellar hook-associated protein FlgK [Pseudomonas putida
          KT2440]
 gi|24986104|gb|AAN69959.1|AE016634_8 flagellar hook-associated protein FlgK [Pseudomonas putida
          KT2440]
          Length = 680

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +   I  SGL+   A + + S NIANA T+G       Y R+          + G   
Sbjct: 1  MSSLISIGLSGLSASQAALSVTSNNIANAATSG-------YSRQQTVQAAGPSHNIGAGF 53

Query: 64 KKIGVDQSTFVEEF 77
             G   +     +
Sbjct: 54 LGTGTTLADVRRIY 67


>gi|304310886|ref|YP_003810484.1| Flagellar basal body rod protein [gamma proteobacterium HdN1]
 gi|301796619|emb|CBL44831.1| Flagellar basal body rod protein [gamma proteobacterium HdN1]
          Length = 245

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 25/50 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A A+G+++  NVN + E   +  ++RL   N++ +    +       +L+
Sbjct: 195 ALANGMLESSNVNPVSELTSVITSSRLMELNVKMLATYKENDQVAARILQ 244


>gi|262276420|ref|ZP_06054229.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
          101886]
 gi|262220228|gb|EEY71544.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
          101886]
          Length = 131

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 9/45 (20%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          G+  Q A  + ++ N+ANA T G       Y+ + + FE+ +  +
Sbjct: 17 GVRAQRA--ETLASNLANANTPG-------YKAQDVDFEQALQAA 52


>gi|229017042|ref|ZP_04173962.1| Flagellar hook protein flgE [Bacillus cereus AH1273]
 gi|229023223|ref|ZP_04179734.1| Flagellar hook protein flgE [Bacillus cereus AH1272]
 gi|228738148|gb|EEL88633.1| Flagellar hook protein flgE [Bacillus cereus AH1272]
 gi|228744313|gb|EEL94395.1| Flagellar hook protein flgE [Bacillus cereus AH1273]
          Length = 407

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 17/90 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +GL      + + S NIANA+T G       Y+++   F+++++ +    +
Sbjct: 1  MIKALYTSITGLNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNS---I 50

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G D       +   +P +  +G VK  
Sbjct: 51 GAKGDD------RYAGTNPKSIGNG-VKMS 73



 Score = 38.8 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 24/40 (60%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++T  ++L+R
Sbjct: 368 NVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLTEVVNLIR 407


>gi|255099438|ref|ZP_05328415.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-63q42]
 gi|255305296|ref|ZP_05349468.1| flagellar basal body rod protein FlgG [Clostridium difficile ATCC
           43255]
          Length = 257

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV+++ E  +M   +R Y AN + I+     +  
Sbjct: 211 IESSNVDMVSEINNMMTISREYEANQKIIQAMDSKLAK 248


>gi|217077496|ref|YP_002335214.1| flagellar basal-body rod protein FlgB [Thermosipho africanus
           TCF52B]
 gi|217037351|gb|ACJ75873.1| flagellar basal-body rod protein FlgB [Thermosipho africanus
           TCF52B]
          Length = 127

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 31/125 (24%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---------GGVRVK 64
            + V   R +I S+NIANA T         Y+RK I FEE+++ S          G  ++
Sbjct: 12  AMDVALKRQEIHSQNIANAETPN-------YKRKYIVFEELLNESKMKLSLKTTSGKHIE 64

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR-ETNRLYM-------ANLQ 116
           +     +  ++     +      G     NV++ +E  +M     R Y        AN+ 
Sbjct: 65  RTPKVVNPIIKA--QKNTSLTNDGN----NVDIDIEMVEMVKNALR-YQTLSRLMSANID 117

Query: 117 TIKQS 121
                
Sbjct: 118 RYNTV 122


>gi|149183417|ref|ZP_01861850.1| FlhP [Bacillus sp. SG-1]
 gi|148848862|gb|EDL63079.1| FlhP [Bacillus sp. SG-1]
          Length = 278

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  NV++  E  DM    R Y    ++I  +  MM
Sbjct: 237 EGSNVDIGKEMTDMLNVQRAYQFQSRSISMADQMM 271


>gi|238782793|ref|ZP_04626822.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
           43970]
 gi|238716216|gb|EEQ08199.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
           43970]
          Length = 251

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 19/45 (42%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G ++  NV+ +    DM  T R +  N++ I    D       LL
Sbjct: 204 GALESSNVSPVKSMVDMIATARGFDMNIKVISAVDDNEKKANQLL 248



 Score = 36.4 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 10/64 (15%)

Query: 13 SGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
          + +   +A +    + S N+ANA TTG       +R +  +F  V      V  + +  +
Sbjct: 7  TAMGAANAALNRQGVTSNNLANASTTG-------FRAQLSAFRAVPINGPSVETRTLVTE 59

Query: 70 QSTF 73
           + +
Sbjct: 60 STPY 63


>gi|288573036|ref|ZP_06391393.1| flagellar basal-body rod protein FlgB [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288568777|gb|EFC90334.1| flagellar basal-body rod protein FlgB [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 131

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 32/110 (29%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF-DP 79
           R + + +N+ANA T G       Y R+ +SFE+ +          I            DP
Sbjct: 19  RFRSVGQNLANANTPG-------YARREVSFEDQLD--------DIVNGPKRLPMATTDP 63

Query: 80  GH------------PVAN--ASGIVKYP--NVNVLVETADMRETNRLYMA 113
            H            P  +     + +    NV+  +E A + ET   Y A
Sbjct: 64  KHMTTHARSVEEVTPREDRIPDQLYRLDRNNVDPEIEMAKLAETKMGYEA 113


>gi|83858797|ref|ZP_00952319.1| flagellar basal body rod protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853620|gb|EAP91472.1| flagellar basal body rod protein [Oceanicaulis alexandrii HTCC2633]
          Length = 138

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 28/125 (22%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD----------- 69
           R ++I+EN+ANA T G TP   P       FE V+ G  G+    +              
Sbjct: 22  RQRVIAENVANANTPGYTPNDIP----RSEFERVLAGQQGLGAVGLRTTHAQHYGGETGG 77

Query: 70  -QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             + F  E  P     ++   V   +V +  +  D  E       N    + +  +   +
Sbjct: 78  GSAQFRTERAP-----DSETTVNGNSVVIEEQMVDANE-------NRMRFETALSLYQKS 125

Query: 129 LDLLR 133
           L+++R
Sbjct: 126 LNMIR 130


>gi|47566136|ref|ZP_00237174.1| flagellar hook protein flgE, putative [Bacillus cereus G9241]
 gi|47557053|gb|EAL15383.1| flagellar hook protein flgE, putative [Bacillus cereus G9241]
          Length = 409

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 26/88 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +     
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNSIGAK 53

Query: 59 --------------GGVRVKKIGVDQST 72
                         GV++     D S 
Sbjct: 54 GDGNYAGTNPKSIGNGVKMSGTVTDYSD 81



 Score = 38.4 bits (89), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 370 NVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 409


>gi|238751759|ref|ZP_04613247.1| Flagellar basal-body rod protein flgB [Yersinia rohdei ATCC 43380]
 gi|238710030|gb|EEQ02260.1| Flagellar basal-body rod protein flgB [Yersinia rohdei ATCC 43380]
          Length = 137

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 25/126 (19%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQSTF 73
           L  Q    +I+S NIANA T G       ++ + I F   +       RV   GV  S  
Sbjct: 18  LRAQRQ--EILSSNIANADTPG-------FQARDIDFSSQLQKVMEQGRVNGTGVSLSLT 68

Query: 74  VEEFDPGH----PVANASGIVKYPN--------VNVLVETADMRETNRLYMANLQTI-KQ 120
                P      P  +   + + P+        V++  E  +  + +  Y  +L  +  Q
Sbjct: 69  SARHIPASTVQPPDLDL--LFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTVLGGQ 126

Query: 121 SHDMMT 126
              MM+
Sbjct: 127 IKGMMS 132


>gi|224418355|ref|ZP_03656361.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491]
          Length = 727

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +++  NV+      D+    R Y  + ++I  +  +M   + L R
Sbjct: 682 MLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQLKR 726


>gi|217034660|ref|ZP_03440065.1| hypothetical protein HP9810_901g7 [Helicobacter pylori 98-10]
 gi|216942868|gb|EEC22359.1| hypothetical protein HP9810_901g7 [Helicobacter pylori 98-10]
          Length = 606

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNASYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQEAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.8 bits (85), Expect = 0.90,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISTIDRMIDTLLGI 604


>gi|77165832|ref|YP_344357.1| hypothetical protein Noc_2369 [Nitrosococcus oceani ATCC 19707]
 gi|254433787|ref|ZP_05047295.1| flagellar hook-associated protein FlgK [Nitrosococcus oceani
          AFC27]
 gi|76884146|gb|ABA58827.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207090120|gb|EDZ67391.1| flagellar hook-associated protein FlgK [Nitrosococcus oceani
          AFC27]
          Length = 647

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 9/72 (12%)

Query: 8  AHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
            I  SGL A Q A +   S NIAN  T G       + R+       +    G      
Sbjct: 7  LGIGASGLLAAQRA-LATTSHNIANVNTPG-------FSRQRTELAARLPEFTGQGFIGT 58

Query: 67 GVDQSTFVEEFD 78
          GVD +T    +D
Sbjct: 59 GVDVTTVRRAYD 70



 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 5/70 (7%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G R ++   +Q T     D    VA   G      VN+  E A++    + + A  + I 
Sbjct: 578 GARTRQAEANQDTHKTLLDQA--VAAREG---VSGVNLEEEAANLIRFQQAFQAAARVIS 632

Query: 120 QSHDMMTTTL 129
            +  M  T L
Sbjct: 633 TADTMFQTLL 642


>gi|33596137|ref|NP_883780.1| flagellar basal body rod protein FlgB [Bordetella parapertussis
          12822]
 gi|33601538|ref|NP_889098.1| flagellar basal body rod protein FlgB [Bordetella bronchiseptica
          RB50]
 gi|33573140|emb|CAE36787.1| flagellar basal-body rod protein FlgB [Bordetella parapertussis]
 gi|33575974|emb|CAE33053.1| flagellar basal-body rod protein FlgB [Bordetella bronchiseptica
          RB50]
          Length = 135

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 9/45 (20%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L  Q    +++S NIANA T         Y+ +   F+  M G+
Sbjct: 17 ALRAQRQ--EVLSSNIANADTPN-------YKARDFDFKAAMQGA 52


>gi|317182372|dbj|BAJ60156.1| flagellar hook-associated protein FlgK [Helicobacter pylori F57]
          Length = 606

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNASYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQEAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|208435016|ref|YP_002266682.1| flagellar hook-associated protein 1 [Helicobacter pylori G27]
 gi|208432945|gb|ACI27816.1| flagellar hook-associated protein 1 [Helicobacter pylori G27]
          Length = 606

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQAAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDIEAIERVHD 71



 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|12620925|gb|AAG61142.1| flagellar hook-associated protein 1 [Helicobacter pylori]
          Length = 606

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNASYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQEAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|229918624|ref|YP_002887270.1| flagellar basal-body rod protein FlgB [Exiguobacterium sp. AT1b]
 gi|229470053|gb|ACQ71825.1| flagellar basal-body rod protein FlgB [Exiguobacterium sp. AT1b]
          Length = 122

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 39/97 (40%), Gaps = 11/97 (11%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
           +IS N++N  T         ++ K   FE+ +     ++++      ST  +  D     
Sbjct: 24  VISHNLSNIDTPN-------FKAKQAVFEQTLQSEMRLKLQGGRPSDSTQSKVIDRAGGA 76

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             + G     NV++  E +++      Y A ++ + +
Sbjct: 77  MRSDGN----NVDLDYEMSELARNQLQYEAMMEQLNR 109


>gi|192290239|ref|YP_001990844.1| hypothetical protein Rpal_1843 [Rhodopseudomonas palustris TIE-1]
 gi|192283988|gb|ACF00369.1| protein of unknown function DUF1078 domain protein
           [Rhodopseudomonas palustris TIE-1]
          Length = 273

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 18/36 (50%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV++  +   M +  + Y A  + +  S++MM 
Sbjct: 231 EASNVDIADQMTTMVQAQQAYSACTRVVTASNEMML 266



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 14/90 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKKIG 67
          A +GL  QSA  + IS N+ANA+TT        ++    +F ++++    S  V  + + 
Sbjct: 10 ATTGLQAQSAAFENISGNVANAQTTA-------FKATNTAFSDLIYPPQVSDTVLWRSVL 62

Query: 68 VDQSTFVEEFDP--GHPVANASGI--VKYP 93
           +       +DP   H      G   V+ P
Sbjct: 63 TNGQQGSISYDPVSTHMAIGGEGYFTVEAP 92


>gi|109948141|ref|YP_665369.1| flagellar basal body rod protein FlgB [Helicobacter acinonychis
           str. Sheeba]
 gi|109715362|emb|CAK00370.1| flagellar basal-body rod protein FlgB [Helicobacter acinonychis
           str. Sheeba]
          Length = 140

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 29/151 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYRALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAK--- 49

Query: 61  VRVKKIGVDQST---FVEEFDPGHPV----ANA-------SGIVKYPN---VNVLVETAD 103
            +  +I  +QS+    +   +P H      AN         G +   +   V++ +ET++
Sbjct: 50  -KKAEIFENQSSKILPLAHTNPKHLDFENNANDGASLFFRDGHLAKNDGNSVDLDIETSE 108

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           M + + +Y+A    +K+   ++   +D  ++
Sbjct: 109 MGKNSTMYLALSSALKKYRGIVNYAIDSSKN 139


>gi|113969603|ref|YP_733396.1| flagellar basal body rod protein FlgB [Shewanella sp. MR-4]
 gi|114046835|ref|YP_737385.1| flagellar basal body rod protein FlgB [Shewanella sp. MR-7]
 gi|113884287|gb|ABI38339.1| flagellar basal-body rod protein FlgB [Shewanella sp. MR-4]
 gi|113888277|gb|ABI42328.1| flagellar basal-body rod protein FlgB [Shewanella sp. MR-7]
          Length = 135

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 9/43 (20%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          G+  + A  ++IS NIANA T         Y+ + + F   ++
Sbjct: 17 GIRAERA--EVISSNIANADTPH-------YKARDVDFSAALN 50


>gi|90422996|ref|YP_531366.1| hypothetical protein RPC_1485 [Rhodopseudomonas palustris BisB18]
 gi|90105010|gb|ABD87047.1| protein of unknown function DUF1078-like [Rhodopseudomonas
           palustris BisB18]
          Length = 599

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  N ++  E   +  T + Y AN + I  ++ M++  L+++R
Sbjct: 557 EASNTDIADEFTKLIVTQQAYSANTKVITTANTMVSDLLNVIR 599



 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  +   + +GL  QS  ++ IS NIAN++TT 
Sbjct: 3  IFGALTTSVAGLRTQSYALENISGNIANSQTTA 35


>gi|313141887|ref|ZP_07804080.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491]
 gi|313130918|gb|EFR48535.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491]
          Length = 708

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +++  NV+      D+    R Y  + ++I  +  +M   + L R
Sbjct: 663 MLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQLKR 707


>gi|261839850|gb|ACX99615.1| flagellar hook-associated protein FlgK [Helicobacter pylori 52]
          Length = 606

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNASYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQEAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|229166594|ref|ZP_04294346.1| Flagellar hook protein flgE [Bacillus cereus AH621]
 gi|228616848|gb|EEK73921.1| Flagellar hook protein flgE [Bacillus cereus AH621]
          Length = 407

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 26/88 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +     
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNSIGAK 53

Query: 59 --------------GGVRVKKIGVDQST 72
                         GV++     D S 
Sbjct: 54 GDGKYAGTNPKSIGNGVKMSGTVTDYSD 81



 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 368 NVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|242309690|ref|ZP_04808845.1| predicted protein [Helicobacter pullorum MIT 98-5489]
 gi|239523691|gb|EEQ63557.1| predicted protein [Helicobacter pullorum MIT 98-5489]
          Length = 74

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  N ++   T +         AN QTI+ +  MM + LD+L
Sbjct: 32  ETSNTDITQSTVNTMNAQNGVEANAQTIQTADSMMQSALDIL 73


>gi|78776566|ref|YP_392881.1| flagellar basal body rod protein FlgB [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497106|gb|ABB43646.1| Flagellar basal-body rod protein FlgB [Sulfurimonas denitrificans
           DSM 1251]
          Length = 143

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 26/143 (18%)

Query: 7   SAHIANS-GLAVQSA-----RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           S  ++ +  LA ++      R  +IS NIANA T         YR + + FE+ +     
Sbjct: 2   SIQVSATHALAAKALDYRAIRQDMISSNIANADT-------PFYRPRDVRFEDTLAEQKA 54

Query: 61  V-------RVKKIGVDQSTFVEEFDPGHPVAN---ASGIVKYPN---VNVLVETADMRET 107
                   ++     D +    + +P +  A      G +   +   V++ VET +M + 
Sbjct: 55  KILNLSIPKLSLAQTDSAHIPLKDEPDNSKAKTFFRDGHMARNDGNSVDLDVETTEMSKN 114

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
           + ++ A +  +K+   +    +D
Sbjct: 115 SIMFNALVGAMKKDSGIFKGVID 137


>gi|238788312|ref|ZP_04632106.1| Flagellar basal-body rod protein flgB [Yersinia frederiksenii ATCC
           33641]
 gi|238723558|gb|EEQ15204.1| Flagellar basal-body rod protein flgB [Yersinia frederiksenii ATCC
           33641]
          Length = 137

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 25/126 (19%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQSTF 73
           L  Q    +I+S NIANA T G       ++ + I F   +       RV   GV  S  
Sbjct: 18  LRAQRQ--EILSSNIANADTPG-------FQARDIDFSSQLKKVMEQGRVNGTGVSLSLT 68

Query: 74  VEEFDPGH----PVANASGIVKYPN--------VNVLVETADMRETNRLYMANLQTI-KQ 120
                P      P  +   + + P+        V++  E  +  + +  Y  +L  +  Q
Sbjct: 69  SARHIPASTVQPPDLDL--LFRVPDQPSLDGNTVDMDRERTNFADNSLKYQTDLTVLGGQ 126

Query: 121 SHDMMT 126
              MM+
Sbjct: 127 IKGMMS 132


>gi|317180851|dbj|BAJ58637.1| flagellar hook-associated protein FlgK [Helicobacter pylori F32]
          Length = 606

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNASYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQEAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.8 bits (85), Expect = 0.93,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISTIDRMIDTLLGI 604


>gi|119469947|ref|ZP_01612752.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
          [Alteromonadales bacterium TW-7]
 gi|119446657|gb|EAW27930.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
          [Alteromonadales bacterium TW-7]
          Length = 135

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 7/40 (17%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          S R ++++ NIANA T G       Y+ K I+F   +  +
Sbjct: 20 SQRAEVLASNIANADTPG-------YKAKDINFASALKAA 52


>gi|330818584|ref|YP_004362289.1| flagellar basal body rod protein FlgF [Burkholderia gladioli
          BSR3]
 gi|327370977|gb|AEA62333.1| flagellar basal body rod protein FlgF [Burkholderia gladioli
          BSR3]
          Length = 250

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 5/59 (8%)

Query: 1  MDYLI-ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          MD LI  +   A   L  QS    +I+ N+ANA TTG       YR   ++F E  + +
Sbjct: 1  MDRLIYTAMTGAGQALEQQS----VIANNLANASTTGFRAQLATYRAVPMNFGEASNPT 55



 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)

Query: 80  GHPVANASGIV-------KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+P A+A   V       +  NVN +     M +  R +  + + I  +     T   +L
Sbjct: 189 GNP-ADADPNVTVAAESLEGSNVNPVAAMVSMLDNARAFQLHTKLISTADQNEQTANQIL 247


>gi|256014918|ref|YP_003104927.1| flagellar basal-body rod protein FlgF [Brucella microti CCM 4915]
 gi|255997578|gb|ACU49265.1| flagellar basal-body rod protein FlgF [Brucella microti CCM 4915]
          Length = 243

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 25/95 (26%)

Query: 58  SGGVRVKKIG--VDQSTFVEEF---------DPGHPVANAS------GIVKYPNVNVLVE 100
             GV+V  IG     +     +          P  PV + +      G+++  NV+ + E
Sbjct: 147 QNGVQVGAIGLYTIPADADLAYAGTSGVIPSKPAQPVVDDNSVGVVQGMIEGSNVDAMTE 206

Query: 101 TADMRETNRLYM--ANL------QTIKQSHDMMTT 127
              +   +R +    NL         +    + + 
Sbjct: 207 MTRLISISRAFEQVNNLLSQQEATVSEAIKTLGSK 241


>gi|253827676|ref|ZP_04870561.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
 gi|253511082|gb|EES89741.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
          Length = 765

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +++  NV+      D+    R Y  + ++I  +  +M   + L R
Sbjct: 720 MLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQLKR 764



 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          SG+      + + S NIAN  TTG       +R  +  F+ + 
Sbjct: 10 SGIKTHQTGIDVTSNNIANVNTTG-------FRANSPEFKSLF 45


>gi|315587007|gb|ADU41388.1| flagellar hook-associated protein FlgK [Helicobacter pylori 35A]
          Length = 606

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNASYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQEAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|256111963|ref|ZP_05452914.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 3
           str. Ether]
 gi|265993412|ref|ZP_06105969.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 3
           str. Ether]
 gi|262764282|gb|EEZ10314.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 3
           str. Ether]
          Length = 243

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 25/95 (26%)

Query: 58  SGGVRVKKIG--VDQSTFVEEF---------DPGHPVANAS------GIVKYPNVNVLVE 100
             GV+V  IG     +     +          P  PV + +      G+++  NV+ + E
Sbjct: 147 QNGVQVGAIGLYTIPADADLAYAGTSGVIPSKPAQPVVDDNSVGVVQGMIEGSNVDAMTE 206

Query: 101 TADMRETNRLYM--ANL------QTIKQSHDMMTT 127
              +   +R +    NL         +    + + 
Sbjct: 207 MTRLISISRAFEQVNNLLSQQEATVSEAIKTLGSK 241


>gi|300024609|ref|YP_003757220.1| flagellar basal body rod protein [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526430|gb|ADJ24899.1| flagellar basal body rod protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 125

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 37/126 (29%)

Query: 17  VQSARMQIISENIANARTTGDTPGSDPYRRKTI-SFEEVMHGSGGVRVKKIGVDQSTFVE 75
            Q     +IS+N+ANA T G       Y+ + + SFE+ M  +  + V            
Sbjct: 18  AQRQ--SVISQNVANANTPG-------YKARDVESFEDAMRKAVPMAVT----------- 57

Query: 76  EFDPGHPVANASGIVKY----PN----------VNVLVETADMRETNRLYMANLQTIKQS 121
             +P H      G+V+     PN          V++  E     E  R Y  N Q ++  
Sbjct: 58  --NPDHFSPAGDGLVQARDNDPNQAEVLVSGNDVSLEQEFLKSGEVMRGYSMNTQIMRTF 115

Query: 122 HDMMTT 127
             M+ +
Sbjct: 116 SGMLRS 121


>gi|89895774|ref|YP_519261.1| hypothetical protein DSY3028 [Desulfitobacterium hafniense Y51]
 gi|89335222|dbj|BAE84817.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 533

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 26/79 (32%), Gaps = 18/79 (22%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
          M    +   +A   L  Q   +     NIANA T G       Y R+ ++ +     S  
Sbjct: 1  MRSTFSGLELARRALESQQIALDTTGHNIANANTIG-------YTRQVVNLQATSPDSIP 53

Query: 59 ---------GGVRVKKIGV 68
                    GV V+ I  
Sbjct: 54 GMGHYLSIGTGVTVQSIER 72


>gi|268680077|ref|YP_003304508.1| hypothetical protein Sdel_1455 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268618108|gb|ACZ12473.1| protein of unknown function DUF1078 domain protein
           [Sulfurospirillum deleyianum DSM 6946]
          Length = 93

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 33/124 (26%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             I  + +   S+ M   + N+AN  T       + ++        + + +  V  +   
Sbjct: 1   MQINANAMMAMSSWMGNSAHNVANVNT-------EEFKATQ---TTITNQNDAVVAQSAQ 50

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              ST                       ++  E  D     R + AN + I+   +M+ T
Sbjct: 51  TQNST-----------------------DLETEFTDQISLERAFEANTKPIQAQDEMLGT 87

Query: 128 TLDL 131
            LD+
Sbjct: 88  LLDM 91


>gi|212639570|ref|YP_002316090.1| flagellar basal body rod protein FlgB [Anoxybacillus flavithermus
           WK1]
 gi|212561050|gb|ACJ34105.1| Flagellar basal body rod protein FlgB [Anoxybacillus flavithermus
           WK1]
          Length = 126

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 37/134 (27%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  I   GL   S + ++I+ NIAN  T         ++ K + F    H +  
Sbjct: 1   MKLFSNTFQILEQGLNYSSLKQKVIANNIANVDTPN-------FKAKDVQFRTEFHQA-- 51

Query: 61  VRVKKIGVDQSTFV---------------EEFDPGHPVANASGIVKYPNVNVLVETADMR 105
             ++    D   F                  ++  +            NV++  E +D+ 
Sbjct: 52  --LQAYRTDPRHFEFKGGTSKFFVTTKNDLVYNHNN-----------NNVDLDKEMSDLA 98

Query: 106 ETNRLYMANLQTIK 119
           +    Y A ++ + 
Sbjct: 99  QNQIYYNALVERLN 112


>gi|168698713|ref|ZP_02730990.1| flagellar basal-body rod protein FlgB [Gemmata obscuriglobus UQM
           2246]
          Length = 116

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 28/121 (23%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-----EVMHGSGGVRVK-KIGV 68
           L     R ++I++N+AN  T G       Y+R  ++FE      +   +GG  VK ++  
Sbjct: 15  LDASGLRHRVIAQNVANVNTPG-------YKRLEVAFEADLAKALASPTGGTPVKPRVVT 67

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                                V   NV++  E   + +   LY A  Q I      + + 
Sbjct: 68  GDGPER---------------VDGNNVDIDAEMNALAKNALLYQAATQIIASRVGTLRSA 112

Query: 129 L 129
           +
Sbjct: 113 I 113


>gi|86750926|ref|YP_487422.1| hypothetical protein RPB_3817 [Rhodopseudomonas palustris HaA2]
 gi|86573954|gb|ABD08511.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 598

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N ++  E   +  T + Y AN + I  ++ M+   L+++R
Sbjct: 559 NTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLNVMR 598



 Score = 33.7 bits (77), Expect = 9.4,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          +  +   + +GL   S  ++ IS NIAN++TT        ++R   SF +++  +G
Sbjct: 3  IFGALTTSVAGLRANSYALENISGNIANSQTTA-------FKRVDTSFLDLIPQAG 51


>gi|83589598|ref|YP_429607.1| flagellar hook-associated protein FlgK [Moorella thermoacetica ATCC
           39073]
 gi|83572512|gb|ABC19064.1| Flagellar hook-associated protein [Moorella thermoacetica ATCC
           39073]
          Length = 486

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 18/38 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E A+M +  R Y A+ + I     M+   ++
Sbjct: 443 SGVSLDEEMANMLQYLRAYEASARMITTLDSMLDKIIN 480



 Score = 38.4 bits (89), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 7/55 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M       + A  G+  Q   +   S NIANA T G       Y R+ +      
Sbjct: 1  MPGTFFGFNTALRGMQAQQRGIYTTSHNIANANTEG-------YTRQQVVLTATP 48


>gi|302874586|ref|YP_003843219.1| flagellar basal-body rod protein FlgB [Clostridium cellulovorans
           743B]
 gi|307690803|ref|ZP_07633249.1| flagellar basal body rod protein FlgB [Clostridium cellulovorans
           743B]
 gi|302577443|gb|ADL51455.1| flagellar basal-body rod protein FlgB [Clostridium cellulovorans
           743B]
          Length = 129

 Score = 39.5 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 51/123 (41%), Gaps = 18/123 (14%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L   + R ++++ NIAN  T G       ++R+ +SFEE +  S    VK I +  +   
Sbjct: 16  LDAVAIRNRVVANNIANINTKG-------FKRQYVSFEEQLKKS----VKDIELKTTDRR 64

Query: 75  -----EEFDPGHPVANASGIVK--YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                  +       +    V+    NV++ +E  ++     L  A +  +   ++M  +
Sbjct: 65  HLSDGTTYGSAVVKKDTKTSVREDGNNVDMDIEMMELSSNQLLNEALVSNLNSRYNMTRS 124

Query: 128 TLD 130
            ++
Sbjct: 125 VIN 127


>gi|229102353|ref|ZP_04233061.1| Flagellar hook protein flgE [Bacillus cereus Rock3-28]
 gi|229115194|ref|ZP_04244604.1| Flagellar hook protein flgE [Bacillus cereus Rock1-3]
 gi|228668334|gb|EEL23766.1| Flagellar hook protein flgE [Bacillus cereus Rock1-3]
 gi|228681000|gb|EEL35169.1| Flagellar hook protein flgE [Bacillus cereus Rock3-28]
          Length = 407

 Score = 39.5 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 26/88 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +     
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNSIGAK 53

Query: 59 --------------GGVRVKKIGVDQST 72
                         GV++     D S 
Sbjct: 54 GDGKYAGTNPKSIGNGVKMSGTVTDYSD 81



 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 368 NVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407


>gi|225569981|ref|ZP_03779006.1| hypothetical protein CLOHYLEM_06076 [Clostridium hylemonae DSM
           15053]
 gi|225161451|gb|EEG74070.1| hypothetical protein CLOHYLEM_06076 [Clostridium hylemonae DSM
           15053]
          Length = 136

 Score = 39.5 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 21/105 (20%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMH--------GSGGVRVKKIGVDQSTFVE 75
           + S NIAN  T G       Y+ K ++FEE              G +V++     S    
Sbjct: 33  VTSNNIANVDTPG-------YKSKYVTFEETFQRRLAAATKAGDGRQVRQAIAGASA--V 83

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +     A   G     NVN   E  ++  T   Y   + ++  
Sbjct: 84  VNETPGETARLDGN----NVNADAEMVELTRTALQYQYGINSVNS 124


>gi|319781687|ref|YP_004141163.1| flagellar basal-body rod protein FlgF [Mesorhizobium ciceri
          biovar biserrulae WSM1271]
 gi|317167575|gb|ADV11113.1| flagellar basal-body rod protein FlgF [Mesorhizobium ciceri
          biovar biserrulae WSM1271]
          Length = 240

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 7/61 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S ++A S       R+  I++N+ANA T G       +R   + FE+V+ G+G   V
Sbjct: 1  MRDSLYVALSSQIALERRLDTIADNVANASTIG-------FRATGVKFEDVVSGTGQKSV 53

Query: 64 K 64
           
Sbjct: 54 S 54



 Score = 38.0 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A G ++  NVN ++E   +    R +      ++Q+       +  L
Sbjct: 191 AQGFLEESNVNPVLEITRLIMVQRAFENTAALMRQTDSSTDEAIKTL 237


>gi|261838448|gb|ACX98214.1| flagellar hook-associated protein 1 [Helicobacter pylori 51]
          Length = 606

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNASYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQEAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|28869143|ref|NP_791762.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213967580|ref|ZP_03395728.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           tomato T1]
 gi|301385715|ref|ZP_07234133.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060072|ref|ZP_07251613.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tomato K40]
 gi|302134831|ref|ZP_07260821.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|28852383|gb|AAO55457.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213927881|gb|EEB61428.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           tomato T1]
 gi|331017023|gb|EGH97079.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 246

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
            SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 197 ESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|304321120|ref|YP_003854763.1| putative flagellar hook protein [Parvularcula bermudensis HTCC2503]
 gi|303300022|gb|ADM09621.1| putative flagellar hook protein [Parvularcula bermudensis HTCC2503]
          Length = 446

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 80  GHPVANASGIVKY-PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             P    +G       V+V  E   + +T R Y +N + I+   +++  T  L+R
Sbjct: 392 DGPTGEMAGFSLMESTVDVANELTQLIQTQRAYSSNAKIIQTVDEILQETNSLVR 446



 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 15/75 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MH 56
          + +S +   +GLA  + ++  I++NI+N+ T G       Y+R    F+ +        +
Sbjct: 3  ISSSLNAGVAGLATNAVKLAAIADNISNSETIG-------YKRAVAEFQSLVIDSGPNAY 55

Query: 57 GSGGVRVKK-IGVDQ 70
           +GGVR    I VD 
Sbjct: 56 SAGGVRATPYIDVDD 70


>gi|291484169|dbj|BAI85244.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
           natto BEST195]
          Length = 129

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 24/106 (22%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
           +I+ NIAN  T         Y+ K +SF+ ++      R++ I  D   +          
Sbjct: 24  VITNNIANIDTPN-------YKAKKVSFQNLLDQESS-RLEAIKTD---YRHV---DFSD 69

Query: 84  ANAS------GIVKYP----NVNVLVETADMRETNRLYMANLQTIK 119
           A+++      G   Y     NV+V  E  ++ +    Y A ++ + 
Sbjct: 70  ADSNYSIVASGDTSYQQNGNNVDVDKEMTELAQNQINYQALVERMN 115


>gi|23499891|ref|NP_699331.1| flagellar basal body rod protein FlgF [Brucella suis 1330]
 gi|148558748|ref|YP_001257194.1| flagellar basal body rod protein FlgF [Brucella ovis ATCC 25840]
 gi|163844323|ref|YP_001621978.1| flagellar basal body rod protein FlgF [Brucella suis ATCC 23445]
 gi|225628603|ref|ZP_03786637.1| flagellar basal body rod protein FlgF [Brucella ceti str. Cudo]
 gi|254699439|ref|ZP_05161267.1| flagellar basal body rod protein FlgF [Brucella suis bv. 5 str.
           513]
 gi|254706314|ref|ZP_05168142.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           M163/99/10]
 gi|254711394|ref|ZP_05173205.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           B2/94]
 gi|254711993|ref|ZP_05173804.1| flagellar basal body rod protein FlgF [Brucella ceti M644/93/1]
 gi|254715063|ref|ZP_05176874.1| flagellar basal body rod protein FlgF [Brucella ceti M13/05/1]
 gi|256029976|ref|ZP_05443590.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           M292/94/1]
 gi|256158141|ref|ZP_05456057.1| flagellar basal body rod protein FlgF [Brucella ceti M490/95/1]
 gi|256252908|ref|ZP_05458444.1| flagellar basal body rod protein FlgF [Brucella ceti B1/94]
 gi|261216770|ref|ZP_05931051.1| flagellar basal body rod protein FlgF [Brucella ceti M13/05/1]
 gi|261219997|ref|ZP_05934278.1| flagellar basal body rod protein FlgF [Brucella ceti B1/94]
 gi|261313761|ref|ZP_05952958.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           M163/99/10]
 gi|261319000|ref|ZP_05958197.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           B2/94]
 gi|261319637|ref|ZP_05958834.1| flagellar basal body rod protein FlgF [Brucella ceti M644/93/1]
 gi|261749890|ref|ZP_05993599.1| flagellar basal body rod protein FlgF [Brucella suis bv. 5 str.
           513]
 gi|265986997|ref|ZP_06099554.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           M292/94/1]
 gi|265996658|ref|ZP_06109215.1| flagellar basal body rod protein FlgF [Brucella ceti M490/95/1]
 gi|294853152|ref|ZP_06793824.1| flagellar basal-body rod protein FlgF [Brucella sp. NVSL 07-0026]
 gi|23463466|gb|AAN33336.1| flagellar basal-body rod protein FlgF [Brucella suis 1330]
 gi|148370033|gb|ABQ62905.1| flagellar basal-body rod protein FlgF [Brucella ovis ATCC 25840]
 gi|163675046|gb|ABY39156.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|225616449|gb|EEH13497.1| flagellar basal body rod protein FlgF [Brucella ceti str. Cudo]
 gi|260918581|gb|EEX85234.1| flagellar basal body rod protein FlgF [Brucella ceti B1/94]
 gi|260921859|gb|EEX88427.1| flagellar basal body rod protein FlgF [Brucella ceti M13/05/1]
 gi|261292327|gb|EEX95823.1| flagellar basal body rod protein FlgF [Brucella ceti M644/93/1]
 gi|261298223|gb|EEY01720.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           B2/94]
 gi|261302787|gb|EEY06284.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           M163/99/10]
 gi|261739643|gb|EEY27569.1| flagellar basal body rod protein FlgF [Brucella suis bv. 5 str.
           513]
 gi|262550955|gb|EEZ07116.1| flagellar basal body rod protein FlgF [Brucella ceti M490/95/1]
 gi|264659194|gb|EEZ29455.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           M292/94/1]
 gi|294818807|gb|EFG35807.1| flagellar basal-body rod protein FlgF [Brucella sp. NVSL 07-0026]
          Length = 243

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 25/95 (26%)

Query: 58  SGGVRVKKIG--VDQSTFVEEF---------DPGHPVANAS------GIVKYPNVNVLVE 100
             GV+V  IG     +     +          P  PV + +      G+++  NV+ + E
Sbjct: 147 QNGVQVGAIGLYTIPADADLAYAGTSGVIPSKPAQPVVDDNSVGVVQGMIEGSNVDAMTE 206

Query: 101 TADMRETNRLYM--ANL------QTIKQSHDMMTT 127
              +   +R +    NL         +    + + 
Sbjct: 207 MTRLISISRAFEQVNNLLSQQEATVSEAIKTLGSK 241


>gi|34558065|ref|NP_907880.1| flagellar hook protein FlgE [Wolinella succinogenes DSM 1740]
 gi|34483783|emb|CAE10780.1| FLAGELLAR HOOK PROTEIN [Wolinella succinogenes]
          Length = 716

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R + AN +T+  S  ++ T L L
Sbjct: 674 EMSNVDLSRSLTQLIVVQRGFQANSKTVTTSDQILNTLLQL 714



 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          SG+      + +   NIAN  TTG
Sbjct: 10 SGMQAHQVALDVEGNNIANVNTTG 33


>gi|313905150|ref|ZP_07838519.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
 gi|313470053|gb|EFR65386.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
          Length = 253

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +G ++  N +++ +  +M  + R   +  Q +K    +++  
Sbjct: 205 NGYLEASNADMIGQMTEMMSSQRALQSAAQMLKMYDQVLSKA 246



 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 10/47 (21%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI---SFEEVM 55
           SGL  Q  ++  IS N+AN  T G       Y+R T+   +F+E M
Sbjct: 9  TSGLITQQRKLNTISNNMANVETAG-------YKRDTMTVSTFQEEM 48


>gi|312882658|ref|ZP_07742395.1| flagellar basal body rod protein FlgF [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369619|gb|EFP97134.1| flagellar basal body rod protein FlgF [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 248

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV+ + E   + +  R +   ++ +  + DM   +  LLR
Sbjct: 200 KGAIEGSNVSAIGEMTSLIDLQRQFEMQVKLMSTAEDMDKASDSLLR 246


>gi|254294563|ref|YP_003060586.1| hypothetical protein Hbal_2209 [Hirschia baltica ATCC 49814]
 gi|254043094|gb|ACT59889.1| protein of unknown function DUF1078 domain protein [Hirschia
           baltica ATCC 49814]
          Length = 458

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E +++  T R Y A  + I  + +M+   + + R
Sbjct: 418 STVDLAEEFSNLIVTQRAYSAASKIITTADEMLNELISIKR 458


>gi|89056665|ref|YP_512116.1| flagellar hook-associated protein FlgK [Jannaschia sp. CCS1]
 gi|88866214|gb|ABD57091.1| flagellar hook-associated protein FlgK putative [Jannaschia sp.
          CCS1]
          Length = 487

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 5/65 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++   A SGL   +    I+S N+ANA T          RR  ++  +  +   GVR+
Sbjct: 3  ISSTLSSALSGLTASARAADIVSSNLANAMT-----EGYAVRRLDLAARQTGNDGAGVRI 57

Query: 64 KKIGV 68
            +  
Sbjct: 58 VGVTR 62


>gi|124268253|ref|YP_001022257.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
 gi|124261028|gb|ABM96022.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
          Length = 242

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 79  PGHPVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           P  P A  A G ++  NVN +     M    R + + ++ ++ +
Sbjct: 184 PVDPNARVAEGTLEGSNVNPIENMVAMIAAARQFESQMKMLQTA 227



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 14/85 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          MD +    +++ SG      R + ++ N+ANA TTG       +R   +           
Sbjct: 1  MDRM---IYLSMSGAKATMQRQETLANNLANASTTGFRAELQAFRAVPVR-----GDGAS 52

Query: 61 VRVKKIGVDQSTFVEEFDPG-HPVA 84
           RV  +          +DP   P+A
Sbjct: 53 TRVYSLETTTG-----YDPTPGPMA 72


>gi|226327744|ref|ZP_03803262.1| hypothetical protein PROPEN_01617 [Proteus penneri ATCC 35198]
 gi|225203448|gb|EEG85802.1| hypothetical protein PROPEN_01617 [Proteus penneri ATCC 35198]
          Length = 98

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +G+++  NVN      DM    R +   ++ I  + D       LL
Sbjct: 50  AGVLEGSNVNPAEAMVDMIANARRFEMQMKVIHSADDNAQRANQLL 95


>gi|121612923|ref|YP_001000393.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005336|ref|ZP_02271094.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|87249505|gb|EAQ72465.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 270

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 214 NSNAIRQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|86153287|ref|ZP_01071491.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85843013|gb|EAQ60224.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 270

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 214 NSNAIRQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|225871951|ref|YP_002753405.1| flagellar hook-associated protein FlgK [Acidobacterium capsulatum
          ATCC 51196]
 gi|225791881|gb|ACO31971.1| flagellar hook-associated protein FlgK [Acidobacterium capsulatum
          ATCC 51196]
          Length = 472

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          M  +  + +IA   L    A + I+S N+ANA TTG T
Sbjct: 1  MASIGTAFNIATGALEADQAALSIVSNNVANANTTGYT 38


>gi|254516990|ref|ZP_05129048.1| flagellar basal-body rod protein FlgF [gamma proteobacterium
           NOR5-3]
 gi|219674495|gb|EED30863.1| flagellar basal-body rod protein FlgF [gamma proteobacterium
           NOR5-3]
          Length = 249

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 86  ASGIVKY-------PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A G VK         NVN +     M E +R +   ++ +K + D+ T++  L+R
Sbjct: 192 ADGNVKMVSGALESSNVNPVTAMVRMIELSRQFEHYVKLMKVAEDVDTSSASLMR 246


>gi|149927804|ref|ZP_01916055.1| Flagellar hook-associated protein [Limnobacter sp. MED105]
 gi|149823426|gb|EDM82657.1| Flagellar hook-associated protein [Limnobacter sp. MED105]
          Length = 576

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 7/72 (9%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +   IA SGL    A +   S NIAN+ T G       + R+ +  +        +    
Sbjct: 4  SVYGIALSGLNAARAGLSTTSHNIANSNTVG-------FNRQQVIQQSRPSTGSDIGYIG 56

Query: 66 IGVDQSTFVEEF 77
           GVD ++    +
Sbjct: 57 QGVDIASVQRVY 68


>gi|117923582|ref|YP_864199.1| flagellar basal-body rod protein FlgB [Magnetococcus sp. MC-1]
 gi|117607338|gb|ABK42793.1| flagellar basal-body rod protein FlgB [Magnetococcus sp. MC-1]
          Length = 137

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 33/101 (32%)

Query: 18  QSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           Q  R  II+ NIANA T G       Y+ + +SFEE +        K    D    +   
Sbjct: 22  QR-RQDIIAANIANADTPG-------YKARRLSFEEEL-------AKSTPRDGDLPMARS 66

Query: 78  DPGHPVANASGI---------VKYP-------NVNVLVETA 102
           DP H    A G          V+ P       +V++  E A
Sbjct: 67  DPRHL--PAQGFLAASGEIQEVETPISKGDMNSVDMEQEMA 105


>gi|311031940|ref|ZP_07710030.1| flagellar hook-associated protein FlgK [Bacillus sp. m3-13]
          Length = 620

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 7/51 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          M     S  +A  GL  Q   +Q +  NIANA T G       Y R+ ++F
Sbjct: 1  MRSTFHSLEVARRGLVTQQTALQTVGHNIANANTPG-------YTRQRVNF 44


>gi|242310749|ref|ZP_04809904.1| flagellar hook protein flge [Helicobacter pullorum MIT 98-5489]
 gi|239523147|gb|EEQ63013.1| flagellar hook protein flge [Helicobacter pullorum MIT 98-5489]
          Length = 764

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +++  NV+      D+    R Y  + ++I  +  +M   + L R
Sbjct: 719 MLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQLKR 763



 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          SG+      + + S NIAN  TTG       +R  T  F+ + 
Sbjct: 10 SGIKTHQVGIDVTSNNIANINTTG-------FRANTPEFKSLF 45


>gi|330967092|gb|EGH67352.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 246

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
            SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 197 ESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|62317080|ref|YP_222933.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 1 str.
           9-941]
 gi|83269073|ref|YP_418364.1| flagellar basal body rod protein FlgF [Brucella melitensis biovar
           Abortus 2308]
 gi|189022347|ref|YP_001932088.1| flagellar basal body rod protein FlgF [Brucella abortus S19]
 gi|225685989|ref|YP_002733961.1| flagellar basal body rod protein FlgF [Brucella melitensis ATCC
           23457]
 gi|237816642|ref|ZP_04595634.1| flagellar basal body rod protein FlgF [Brucella abortus str. 2308
           A]
 gi|254691431|ref|ZP_05154685.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 6 str.
           870]
 gi|254695270|ref|ZP_05157098.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698369|ref|ZP_05160197.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731814|ref|ZP_05190392.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 4 str.
           292]
 gi|256256617|ref|ZP_05462153.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 9 str.
           C68]
 gi|256262885|ref|ZP_05465417.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|260544321|ref|ZP_05820142.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260757049|ref|ZP_05869397.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 6 str.
           870]
 gi|260759580|ref|ZP_05871928.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 4 str.
           292]
 gi|260762824|ref|ZP_05875156.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882859|ref|ZP_05894473.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 9 str.
           C68]
 gi|261215636|ref|ZP_05929917.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 3 str.
           Tulya]
 gi|297249974|ref|ZP_06933675.1| flagellar basal-body rod protein FlgF [Brucella abortus bv. 5 str.
           B3196]
 gi|62197273|gb|AAX75572.1| FlgF, flagellar basal-body rod protein FlgF [Brucella abortus bv. 1
           str. 9-941]
 gi|82939347|emb|CAJ12294.1| Flagellar basal body rod protein [Brucella melitensis biovar
           Abortus 2308]
 gi|189020921|gb|ACD73642.1| Flagellar basal body rod protein [Brucella abortus S19]
 gi|225642094|gb|ACO02007.1| flagellar basal body rod protein [Brucella melitensis ATCC 23457]
 gi|237787455|gb|EEP61671.1| flagellar basal body rod protein FlgF [Brucella abortus str. 2308
           A]
 gi|260097592|gb|EEW81466.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260669898|gb|EEX56838.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 4 str.
           292]
 gi|260673245|gb|EEX60066.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677157|gb|EEX63978.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 6 str.
           870]
 gi|260872387|gb|EEX79456.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 9 str.
           C68]
 gi|260917243|gb|EEX84104.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 3 str.
           Tulya]
 gi|263092722|gb|EEZ16931.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|297173843|gb|EFH33207.1| flagellar basal-body rod protein FlgF [Brucella abortus bv. 5 str.
           B3196]
 gi|326410315|gb|ADZ67379.1| flagellar basal body rod protein FlgF [Brucella melitensis M28]
 gi|326553608|gb|ADZ88247.1| flagellar basal body rod protein FlgF [Brucella melitensis M5-90]
          Length = 243

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 25/95 (26%)

Query: 58  SGGVRVKKIG--VDQSTFVEEF---------DPGHPVANAS------GIVKYPNVNVLVE 100
             GV+V  IG     +     +          P  PV + +      G+++  NV+ + E
Sbjct: 147 QNGVQVGAIGLYTIPADADLAYAGTSGVIPSKPAQPVVDDNSVGVVQGMIEGSNVDAMTE 206

Query: 101 TADMRETNRLYM--ANL------QTIKQSHDMMTT 127
              +   +R +    NL         +    + + 
Sbjct: 207 MTRLISISRAFEQVNNLLSQQEATVSEAIKTLGSK 241


>gi|91976146|ref|YP_568805.1| hypothetical protein RPD_1667 [Rhodopseudomonas palustris BisB5]
 gi|91682602|gb|ABE38904.1| protein of unknown function DUF1078-like [Rhodopseudomonas
           palustris BisB5]
          Length = 610

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N ++  E   +  T + Y AN + I  ++ M+   L+++R
Sbjct: 571 NTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLNVMR 610



 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 8/69 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-VR 62
          +  +   + +GL   S  ++ IS NIAN++TT        ++R   +F +++  +G   +
Sbjct: 3  IFGALTTSVAGLRANSYALENISGNIANSQTTA-------FKRVDTAFLDLIPQAGTNAQ 55

Query: 63 VKKIGVDQS 71
          V      +S
Sbjct: 56 VAGSVTSES 64


>gi|255017932|ref|ZP_05290058.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
          F2-515]
          Length = 29

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANA 32
          +    + + S L      M++ S NIANA
Sbjct: 1  MFEGINTSGSALNAAKQWMEVSSNNIANA 29


>gi|240139802|ref|YP_002964279.1| flagellar basal-body rod protein flgF [Methylobacterium
          extorquens AM1]
 gi|240009776|gb|ACS41002.1| flagellar basal-body rod protein flgF [Methylobacterium
          extorquens AM1]
          Length = 246

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 10/95 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +  +  S     +  + +I+ N+AN  TTG       ++ ++  F+E +        
Sbjct: 1  MQNALFVGVSAQTALARELDVIANNMANVSTTG-------FKARSSRFQEYLMPVASA-- 51

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
                        D G P+    G V+ P+ N +
Sbjct: 52 DSFQRSDRRLSYVIDQGTPLDLTQGPVE-PDSNPM 85


>gi|330875985|gb|EGH10134.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 246

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
            SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 197 ESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|94266588|ref|ZP_01290271.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93452783|gb|EAT03318.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 619

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 24/41 (58%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E +D+  T R++ AN ++I  + ++  T + L
Sbjct: 578 EGSNVDLGREFSDLIMTQRIFQANSKSITTADEVFDTLMRL 618



 Score = 34.5 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 30/97 (30%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGVRVK 64
           SGL   S  M ++ +NIAN  TT        Y+    SF+ ++  S         G +V 
Sbjct: 12  SGLNSMSGNMAVMGDNIANVNTTS-------YKSSQASFQNILTSSQERFGEIGNGSQVA 64

Query: 65  KIGVDQSTFVEE---------------FDPGHPVANA 86
            I  +      E               F   +P+A+ 
Sbjct: 65  AITKNFRPGDLETTNQSTDMAISGKGFFMVNNPLADE 101


>gi|307721125|ref|YP_003892265.1| hypothetical protein Saut_1205 [Sulfurimonas autotrophica DSM
           16294]
 gi|306979218|gb|ADN09253.1| protein of unknown function DUF1078 domain protein [Sulfurimonas
           autotrophica DSM 16294]
          Length = 101

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 38/126 (30%), Gaps = 29/126 (23%)

Query: 8   AHIAN--SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +I+N  S +      +   + N+AN  T G  P              + + S  VR   
Sbjct: 1   MNISNNISSIGAHQTMLNTTANNVANVNTDGFVPKDT----------RMSNDSNSVRAT- 49

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I    S    +                   ++  E  D          N+  I+   +MM
Sbjct: 50  IRETDSNGSAKSQT----------------DLAKEIPDEIIAQDATTVNVNVIRTQDEMM 93

Query: 126 TTTLDL 131
            T LD+
Sbjct: 94  GTLLDI 99


>gi|291534844|emb|CBL07956.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          M50/1]
          Length = 589

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 7/52 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE 52
          M     S  I  +GL      + + S N+AN  TTG       Y R+++ F 
Sbjct: 1  MANGFGSMFIGVAGLQSSQNALNVTSNNLANLDTTG-------YVRQSVLFA 45


>gi|170750088|ref|YP_001756348.1| hypothetical protein Mrad2831_3689 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170656610|gb|ACB25665.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium radiotolerans JCM 2831]
          Length = 263

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +G V+  N  +  + + M ET + Y AN + +  +  M+   + +
Sbjct: 217 AGSVEQSNAGISDQFSKMIETQQAYTANTKVMSTTDQMLQDAIAM 261



 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          L  +   + SG + QS  +  IS NIAN +T G
Sbjct: 3  LFTALSNSISGASAQSLALNNISGNIANTQTVG 35


>gi|32267203|ref|NP_861235.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449]
 gi|32263256|gb|AAP78301.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449]
          Length = 718

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R + AN + +  S  ++ T L+L
Sbjct: 676 EMSNVDLSRSLTQLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 37.6 bits (87), Expect = 0.63,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          SG+      + + S NIAN  T G
Sbjct: 10 SGMQAHQIALDVESNNIANVNTVG 33


>gi|315929130|gb|EFV08357.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 270

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 214 NSNAIRQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|309390123|gb|ADO78003.1| flagellar hook-associated protein FlgK [Halanaerobium praevalens
          DSM 2228]
          Length = 572

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 7/82 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
          M+ + +   +    L  Q   + +   NIANA           ++         +  +G 
Sbjct: 1  MNNIFSGLSVGLRALETQRKSLDVTGHNIANANNEKYNKQRAVHKASYPYTAPGLSNNGS 60

Query: 60 ------GVRVKKIGVDQSTFVE 75
                GV + +I   +  F+ 
Sbjct: 61 AGQMGTGVEIAQIERVKDQFIS 82


>gi|291539398|emb|CBL12509.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          XB6B4]
          Length = 587

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 7/52 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE 52
          M     S  I  +GL      + + S N+AN  TTG       Y R+++ F 
Sbjct: 1  MANGFGSMFIGVAGLQSSQNALNVTSNNLANLDTTG-------YVRQSVLFA 45


>gi|283953937|ref|ZP_06371466.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni 414]
 gi|283794542|gb|EFC33282.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni 414]
          Length = 270

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 214 NSNAIRQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|240145383|ref|ZP_04743984.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          L1-82]
 gi|257202504|gb|EEV00789.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          L1-82]
          Length = 587

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 7/52 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE 52
          M     S  I  +GL      + + S N+AN  TTG       Y R+++ F 
Sbjct: 1  MANGFGSMFIGVAGLQSSQNALNVTSNNLANLDTTG-------YVRQSVLFA 45


>gi|83858805|ref|ZP_00952327.1| flagellar basal-body rod protein FlgF [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853628|gb|EAP91480.1| flagellar basal-body rod protein FlgF [Oceanicaulis alexandrii
           HTCC2633]
          Length = 244

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             G ++  NV  ++E   M E +R Y +  + IK + ++    +D L R
Sbjct: 195 KQGFLESSNVRPMLEITSMMEVSRAYASVSRMIKDTDELSRKAIDRLGR 243



 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 3/24 (12%)

Query: 14 GLAVQ---SARMQIISENIANART 34
          GL  Q     +M +++ NIANA T
Sbjct: 8  GLTRQLTLRRQMDVVANNIANANT 31


>gi|241765797|ref|ZP_04763738.1| flagellar hook-associated protein FlgK [Acidovorax delafieldii
          2AN]
 gi|241364308|gb|EER59458.1| flagellar hook-associated protein FlgK [Acidovorax delafieldii
          2AN]
          Length = 664

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 14/79 (17%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++  ++    L      +Q    NIAN  T G       Y R+T+  + V          
Sbjct: 1  MSLLNVGARALLANQVALQTAGHNIANVNTPG-------YSRQTVVLQTVQGQFTGGGYI 53

Query: 58 SGGVRVKKIGVDQSTFVEE 76
            GV V+ I  +QS  +  
Sbjct: 54 GQGVDVQTILRNQSELLTR 72


>gi|224825165|ref|ZP_03698271.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
 gi|224602836|gb|EEG09013.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
          Length = 246

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG ++  NVN +     M    R +  N++ ++ S         +L
Sbjct: 198 SGALEGSNVNAVESLVQMISHARQFDLNVKLMQTSDQNEQKASQIL 243


>gi|94263193|ref|ZP_01287010.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456411|gb|EAT06531.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 619

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 24/41 (58%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E +D+  T R++ AN ++I  + ++  T + L
Sbjct: 578 EGSNVDLGREFSDLIMTQRIFQANSKSITTADEVFDTLMRL 618



 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 30/97 (30%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGVRVK 64
           SGL   S  M ++ +NIAN  TT        Y+    SF+ ++  S         G +V 
Sbjct: 12  SGLNSMSGNMAVMGDNIANVNTTS-------YKSSQASFQNILTSSQERFGEIGNGSQVA 64

Query: 65  KIGVDQSTFVEE---------------FDPGHPVANA 86
            I  +      E               F   +P+A+ 
Sbjct: 65  AITKNFRPGDLETTNQSTDMAISGKGFFMVNNPLADE 101


>gi|220929471|ref|YP_002506380.1| flagellar basal-body rod protein FlgB [Clostridium cellulolyticum
           H10]
 gi|219999799|gb|ACL76400.1| flagellar basal-body rod protein FlgB [Clostridium cellulolyticum
           H10]
          Length = 137

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 24/131 (18%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR-VKKIGVDQ---- 70
           +    R ++IS+N+AN  T         Y+RK ++FE+ ++ S   R ++ I  D+    
Sbjct: 17  SASWTRNEVISQNLANIDTPN-------YKRKDVTFEQYLNDSLDSRKLEGITTDERHIP 69

Query: 71  --STFVEEFDPGHPVANA------SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             S  +E+  P   + N+       G     NV+V  E A + +    Y   +Q I  + 
Sbjct: 70  IKSKNIEKVKPEITLDNSDTSMRIDGN----NVDVDSEMAYLAKNTIQYNTLIQMINSNF 125

Query: 123 DMMTTTLDLLR 133
             + + +   R
Sbjct: 126 SRIKSVISEGR 136


>gi|71735751|ref|YP_275560.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|289627765|ref|ZP_06460719.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651644|ref|ZP_06482987.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|71556304|gb|AAZ35515.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320325095|gb|EFW81164.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329354|gb|EFW85347.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330866424|gb|EGH01133.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330880528|gb|EGH14677.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330889082|gb|EGH21743.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           mori str. 301020]
 gi|330986470|gb|EGH84573.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011044|gb|EGH91100.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 246

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
            SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 197 ESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|56460255|ref|YP_155536.1| flagellar basal body protein [Idiomarina loihiensis L2TR]
 gi|56179265|gb|AAV81987.1| Flagellar basal body protein [Idiomarina loihiensis L2TR]
          Length = 134

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          MD L     I    L V++ R ++I+ NIANA T G       Y+ K + F++ +  + 
Sbjct: 5  MDKL---MGIQQHTLGVRTQRAELIANNIANADTPG-------YKAKGLDFQQALQQAQ 53


>gi|306846298|ref|ZP_07478859.1| flagellar basal body rod protein FlgF [Brucella sp. BO1]
 gi|306273293|gb|EFM55162.1| flagellar basal body rod protein FlgF [Brucella sp. BO1]
          Length = 243

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 25/95 (26%)

Query: 58  SGGVRVKKIG--VDQSTFVEEF---------DPGHPVANAS------GIVKYPNVNVLVE 100
             GV+V  IG     +     +          P  PV + +      G+++  NV+ + E
Sbjct: 147 QNGVQVGAIGLYTIPADADVAYAGTSGVIPSKPAQPVVDDNSVGVVQGMIEGSNVDAMTE 206

Query: 101 TADMRETNRLYM--ANL------QTIKQSHDMMTT 127
              +   +R +    NL         +    + + 
Sbjct: 207 MTRLISISRAFEQVNNLLSQQETTVSEAIKTLGSK 241


>gi|283956106|ref|ZP_06373593.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792426|gb|EFC31208.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 270

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 214 NSNAIRQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|160901818|ref|YP_001567399.1| flagellar basal body rod protein [Petrotoga mobilis SJ95]
 gi|160359462|gb|ABX31076.1| flagellar basal body rod protein [Petrotoga mobilis SJ95]
          Length = 240

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            G ++  NV+ L E   M E NR +    + +     +    +++  +
Sbjct: 192 QGFLESSNVDALNEMIKMIEANRKFDILQKAVLTGDSLNAKLIEITSN 239


>gi|313144034|ref|ZP_07806227.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
 gi|313129065|gb|EFR46682.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
          Length = 707

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R + AN + +  S  ++ T L+L
Sbjct: 665 EMSNVDLSRSLTQLIVVQRGFQANSKAVTTSDQILNTLLNL 705


>gi|302185581|ref|ZP_07262254.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           syringae 642]
 gi|330953725|gb|EGH53985.1| flagellar basal body rod protein FlgF [Pseudomonas syringae Cit 7]
          Length = 246

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
            SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 197 ESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|254702556|ref|ZP_05164384.1| flagellar basal body rod protein FlgF [Brucella suis bv. 3 str.
           686]
 gi|261753134|ref|ZP_05996843.1| flagellar basal body rod protein FlgF [Brucella suis bv. 3 str.
           686]
 gi|261742887|gb|EEY30813.1| flagellar basal body rod protein FlgF [Brucella suis bv. 3 str.
           686]
          Length = 243

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 25/95 (26%)

Query: 58  SGGVRVKKIG--VDQSTFVEEF---------DPGHPVANAS------GIVKYPNVNVLVE 100
             GV+V  IG     +     +          P  PV + +      G+++  NV+ + E
Sbjct: 147 QNGVQVGVIGLYTIPADADLAYAGTSGVIPSKPAQPVVDDNSVGVVQGMIEGSNVDAMTE 206

Query: 101 TADMRETNRLYM--ANL------QTIKQSHDMMTT 127
              +   +R +    NL         +    + + 
Sbjct: 207 MTRLISISRAFEQVNNLLSQQEATVSEAIKTLGSK 241


>gi|225849134|ref|YP_002729298.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225644137|gb|ACN99187.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 237

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN++ E  +M  ++R +   +   K    +     ++ +
Sbjct: 190 QGFLEGSNVNIVKEMVEMINSHRRFDIYMNLAKSLDQLEGRLNEIGK 236


>gi|224437581|ref|ZP_03658537.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
          Length = 718

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R + AN + +  S  ++ T L+L
Sbjct: 676 EMSNVDLSRSLTQLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 37.2 bits (86), Expect = 0.67,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          SG+      + + S NIAN  T G
Sbjct: 10 SGMQAHQIALDVESNNIANVNTVG 33


>gi|154250381|ref|YP_001411206.1| flagellar basal-body rod protein FlgB [Fervidobacterium nodosum
          Rt17-B1]
 gi|154154317|gb|ABS61549.1| flagellar basal-body rod protein FlgB [Fervidobacterium nodosum
          Rt17-B1]
          Length = 131

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 9/60 (15%)

Query: 1  MDY-LIAS-AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          MD  +  S      + L VQ  R +I ++NIANA T G       Y+RK I+FEE +  S
Sbjct: 1  MDNSIFNSNFDTLKTALDVQMKRQEIHAQNIANAETPG-------YKRKYIAFEEYLQES 53


>gi|88596898|ref|ZP_01100134.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218562336|ref|YP_002344115.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|88190587|gb|EAQ94560.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112360042|emb|CAL34834.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|284925953|gb|ADC28305.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315926811|gb|EFV06185.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 270

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 214 NSNAIRQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|296103610|ref|YP_003613756.1| Flagellar basal-body rod protein FlgF [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058069|gb|ADF62807.1| Flagellar basal-body rod protein FlgF [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 245

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 19/43 (44%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV+ +     M   +R +  N++ I+ + +       LL
Sbjct: 200 IEGSNVSPVQAMTQMIANSRGFDMNMKVIRTADENAQKANQLL 242


>gi|212637791|ref|YP_002314316.1| flagellar hook-associated protein [Shewanella piezotolerans WP3]
 gi|212559275|gb|ACJ31729.1| Flagellar hook-associated protein, putative [Shewanella
          piezotolerans WP3]
          Length = 457

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 11/68 (16%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----SGG 60
          ++  +I  SGL    A +   S N+ANA      PG   Y R+ +    V +G      G
Sbjct: 1  MSMLNIGMSGLNASMAALNATSNNVANA----MVPG---YSRQQVMMSSVGNGVYGSGAG 53

Query: 61 VRVKKIGV 68
          V V  +  
Sbjct: 54 VMVDGVRR 61



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E  ++    + Y AN + I  +  +  T L+
Sbjct: 418 SGVNMDEEGTNLIIYQQSYQANAKVISTADQLFQTILN 455


>gi|114762176|ref|ZP_01441644.1| flagellar hook-associated protein K [Pelagibaca bermudensis
          HTCC2601]
 gi|114545200|gb|EAU48203.1| flagellar hook-associated protein K [Roseovarius sp. HTCC2601]
          Length = 486

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 8/74 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-VMHGSGGVR 62
          L  +   A SGL   S    +++ NIANA T       + Y R+T+      +  SGGV 
Sbjct: 3  LSGALSNALSGLTANSRSAGLVASNIANATT-------ESYGRRTLDLSARTLGNSGGVW 55

Query: 63 VKKIGVDQSTFVEE 76
          +  +  +    V  
Sbjct: 56 IDGVTRNVDPAVLA 69


>gi|322432999|ref|YP_004210248.1| flagellar basal-body rod protein FlgB [Acidobacterium sp. MP5ACTX9]
 gi|321165226|gb|ADW70930.1| flagellar basal-body rod protein FlgB [Acidobacterium sp. MP5ACTX9]
          Length = 117

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 22/94 (23%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R Q I+ N+AN  T G       YR K ++F++ M  +        G D S F    +  
Sbjct: 21  REQTIASNMANVDTPG-------YRTKDVNFKQAMMTASS------GADGSEFTPVVN-- 65

Query: 81  HPVANASGIVKYP---NVNVLVETADMRETNRLY 111
                 +G+++ P   NVN+  E+  + ++   Y
Sbjct: 66  ----KVNGLLERPDGNNVNLDRESLLLAQSQLQY 95


>gi|260431753|ref|ZP_05785724.1| flagellar basal body rod protein FlgB [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415581|gb|EEX08840.1| flagellar basal body rod protein FlgB [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 129

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 4   LIASAHI--ANSGLAVQS-ARMQIISENIANARTTGDTPGSDPYRRKTI-SFEEVMHGSG 59
           + +  ++      +A  +  R  +IS N+ANA T G       YR + I  FE+ +    
Sbjct: 1   MFSDLNVFKVAYAMATHAGQRQAVISRNMANADTPG-------YRARDIEPFEKALENRQ 53

Query: 60  GVRVKKIGVDQSTFVEEFDPGHP-VANASGIVKY---------PN---VNVLVETADMRE 106
             +                PGH   A ++G +           PN   V++  E  +  E
Sbjct: 54  STQTMIATR----------PGHLNAAGSNGHLWAEFVREGAVDPNGNGVSLETEMLNAVE 103

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R +        ++  +  ++L +LR
Sbjct: 104 VKRQH-------DRAVAIYKSSLGILR 123


>gi|109947182|ref|YP_664410.1| flagellar hook-associated protein FlgK [Helicobacter acinonychis
          str. Sheeba]
 gi|109714403|emb|CAJ99411.1| flgK [Helicobacter acinonychis str. Sheeba]
          Length = 606

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIAKPQEAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDIEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|302878282|ref|YP_003846846.1| flagellar hook-associated protein FlgK [Gallionella
           capsiferriformans ES-2]
 gi|302581071|gb|ADL55082.1| flagellar hook-associated protein FlgK [Gallionella
           capsiferriformans ES-2]
          Length = 646

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    R Y A  + ++ ++ M  + L L R
Sbjct: 606 SGVNLDEEAANLLRYQRAYQAAAKAMQIANTMFDSLLTLGR 646



 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          + SG+      +     NIANA T G       Y R+T+        + G      GVD 
Sbjct: 9  SLSGMNAAQFALSTTQHNIANANTPG-------YSRQTMLVNSRAAQATGAGFVGQGVDV 61

Query: 71 STFVEEFDP 79
          +  V  +D 
Sbjct: 62 TGVVRNYDQ 70


>gi|254462007|ref|ZP_05075423.1| flagellar basal-body rod protein FlgF [Rhodobacterales bacterium
          HTCC2083]
 gi|206678596|gb|EDZ43083.1| flagellar basal-body rod protein FlgF [Rhodobacteraceae bacterium
          HTCC2083]
          Length = 237

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 7/38 (18%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M +I+ NIANA TTG       YR++ + F EV+ G  
Sbjct: 19 MSVIASNIANANTTG-------YRQEGLIFSEVIKGES 49



 Score = 39.1 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 3/38 (7%)

Query: 79  PGHPVANA---SGIVKYPNVNVLVETADMRETNRLYMA 113
           P  P  +A    G ++  NVN + + A M E  R Y  
Sbjct: 179 PTEPNFDARVRQGFLEGSNVNPMSQIARMIEVQRAYEM 216


>gi|172057891|ref|YP_001814351.1| flagellar basal-body rod protein FlgB [Exiguobacterium sibiricum
           255-15]
 gi|171990412|gb|ACB61334.1| flagellar basal-body rod protein FlgB [Exiguobacterium sibiricum
           255-15]
          Length = 120

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 43/119 (36%), Gaps = 31/119 (26%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---------KIGVDQSTFV 74
           +IS NIAN  T G       Y+ K + F +V+     + +K          I    S   
Sbjct: 24  VISTNIANVDTPG-------YKAKRVVFSDVLDSEMKMSLKRHATIGTSGSIVEQSSAMR 76

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                     + +G      V++ +E +++      Y A ++ + +    + + +   R
Sbjct: 77  N---------DGNG------VDIDLEMSELSRNQIEYEALVEQLNRKFSGIQSVIRGGR 120


>gi|332284020|ref|YP_004415931.1| flagellar basal body rod protein FlgF [Pusillimonas sp. T7-7]
 gi|330427973|gb|AEC19307.1| flagellar basal body rod protein FlgF [Pusillimonas sp. T7-7]
          Length = 248

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 17/46 (36%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +G V+  NVN       M    R +   ++ I+ +         +L
Sbjct: 200 AGFVEKSNVNPAEAMVGMIANARRFEMQMKVIQDASSNAERANSIL 245


>gi|167770195|ref|ZP_02442248.1| hypothetical protein ANACOL_01538 [Anaerotruncus colihominis DSM
           17241]
 gi|167667517|gb|EDS11647.1| hypothetical protein ANACOL_01538 [Anaerotruncus colihominis DSM
           17241]
          Length = 273

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 29/68 (42%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +GG R   I    +          P    +G+++   V++  E A++  + R +  + +
Sbjct: 198 NTGGFRETPISGTPTVIKASSRASRPYTIVTGMLEQSAVDLSEEMANIIVSQRAFQFSAK 257

Query: 117 TIKQSHDM 124
            ++ + ++
Sbjct: 258 MVQTADEI 265



 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 11/53 (20%)

Query: 8  AHIA----NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
           +IA     SGL      M ++S N+AN  T G       Y+    SF ++++
Sbjct: 1  MNIAFYNGVSGLVAYQQEMDLVSNNVANVNTVG-------YKPSRASFSDLLY 46


>gi|94500248|ref|ZP_01306781.1| Flagellar hook-associated protein [Oceanobacter sp. RED65]
 gi|94427547|gb|EAT12524.1| Flagellar hook-associated protein [Oceanobacter sp. RED65]
          Length = 991

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +     I  SGL V    + +   NIAN  T G +        +   F+  +   GG RV
Sbjct: 1  MAGILEIGISGLRVHQTALTVTGNNIANVDTEGYSRQDASIVSQNPQFQGGVWIGGGARV 60

Query: 64 KKIGVDQSTFVEEFD 78
            +          +D
Sbjct: 61 DDV-------RRIYD 68


>gi|86151576|ref|ZP_01069790.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|157414984|ref|YP_001482240.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|85841205|gb|EAQ58453.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|157385948|gb|ABV52263.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|307747621|gb|ADN90891.1| Flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315931896|gb|EFV10851.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 270

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 214 NSNAIRQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|114330362|ref|YP_746584.1| flagellar basal body rod protein FlgF [Nitrosomonas eutropha C91]
 gi|114307376|gb|ABI58619.1| flagellar basal-body rod protein FlgF [Nitrosomonas eutropha C91]
          Length = 247

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 7/56 (12%)

Query: 84  ANASGIVKY-------PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A ASG V          NVN + E   M    R +   ++ ++ +        +++
Sbjct: 188 APASGKVALIDGALESSNVNAVSEMVKMITLARQFDMQMKMLENAQQNAQQASEIM 243


>gi|255030434|ref|ZP_05302385.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           LO28]
          Length = 435

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 398 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 435


>gi|315124199|ref|YP_004066203.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|315017921|gb|ADT66014.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
          Length = 270

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 214 NSNAIRQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|289670506|ref|ZP_06491581.1| flagellar hook protein FlgE [Xanthomonas campestris pv.
          musacearum NCPPB4381]
          Length = 142

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 17/71 (23%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------- 58
           + + SG+   +A + + S NIAN  TTG       ++     F ++   +         
Sbjct: 3  FNTSLSGINAANADLNVTSNNIANVNTTG-------FKESRAEFADMFQSTSYGLSRNAV 55

Query: 59 -GGVRVKKIGV 68
            GVRV  +  
Sbjct: 56 GSGVRVSNVAQ 66


>gi|205355539|ref|ZP_03222310.1| putative flagellar basaL body rod protein [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|205346773|gb|EDZ33405.1| putative flagellar basaL body rod protein [Campylobacter jejuni
           subsp. jejuni CG8421]
          Length = 270

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 214 NSNAIRQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|163738040|ref|ZP_02145456.1| Flagellar hook-associated protein [Phaeobacter gallaeciensis
          BS107]
 gi|161388656|gb|EDQ13009.1| Flagellar hook-associated protein [Phaeobacter gallaeciensis
          BS107]
          Length = 482

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 7/69 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++ + A +GL        ++SEN++N  T G       Y R++++      G  GV+V
Sbjct: 3  ITSALNSAMTGLTAAGRSTSVVSENLSNVLTPG-------YSRRSLALTSAGDGFSGVKV 55

Query: 64 KKIGVDQST 72
            +      
Sbjct: 56 GHVQRINDP 64


>gi|148926662|ref|ZP_01810343.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni CG8486]
 gi|145845181|gb|EDK22276.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni CG8486]
          Length = 270

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 214 NSNAIRQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|157961177|ref|YP_001501211.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC
          700345]
 gi|157846177|gb|ABV86676.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC
          700345]
          Length = 640

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA +G+    +++ I S NIANA T G       Y R+ +S   +     G    
Sbjct: 3  LDLMNIARTGVLASQSQLAITSNNIANANTAG-------YNRQVVSQSALDSQRMGNDFY 55

Query: 65 KIGVDQSTFVEEFD 78
            G   S     ++
Sbjct: 56 GAGTYVSDVKRVYN 69


>gi|153952418|ref|YP_001398358.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939864|gb|ABS44605.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 270

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 214 NSNAIRQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|85715053|ref|ZP_01046038.1| Flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
 gi|85698250|gb|EAQ36122.1| Flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
          Length = 255

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NV+ + E + M + +R Y      ++Q  D+  T ++
Sbjct: 205 QGFIERSNVSAVTEMSRMVQVSRAYTQMATLLQQQSDLQRTAIE 248


>gi|57237000|ref|YP_178801.1| flagellar basal-body rod protein [Campylobacter jejuni RM1221]
 gi|86149760|ref|ZP_01067989.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|57165804|gb|AAW34583.1| flagellar basal-body rod protein [Campylobacter jejuni RM1221]
 gi|85839578|gb|EAQ56838.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|315058160|gb|ADT72489.1| Flagellar basal-body rod protein flgF [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 270

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 214 NSNAIRQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|260574381|ref|ZP_05842385.1| flagellar hook-associated protein FlgK [Rhodobacter sp. SW2]
 gi|259023277|gb|EEW26569.1| flagellar hook-associated protein FlgK [Rhodobacter sp. SW2]
          Length = 485

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 9/65 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GV 61
          L AS   A SGL   S   +++S N+ANA T G       Y R+ I+   +  G    GV
Sbjct: 3  LSASLSNAMSGLTASSRAAEVVSSNVANAMTEG-------YARREINLAALSLGGAGKGV 55

Query: 62 RVKKI 66
           V  I
Sbjct: 56 VVTGI 60


>gi|261821154|ref|YP_003259260.1| flagellar basal body rod protein FlgF [Pectobacterium wasabiae
           WPP163]
 gi|261605167|gb|ACX87653.1| flagellar basal-body rod protein FlgF [Pectobacterium wasabiae
           WPP163]
          Length = 251

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +    DM    R +   ++ I    D       +L
Sbjct: 204 GVIEGSNVNTVDTMVDMIANARRFEMQMKVISSVDDNAQRANQIL 248


>gi|299822286|ref|ZP_07054172.1| flagellar basal-body rod protein FlgB [Listeria grayi DSM 20601]
 gi|299815815|gb|EFI83053.1| flagellar basal-body rod protein FlgB [Listeria grayi DSM 20601]
          Length = 121

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 15/99 (15%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK----IGVDQSTFVEEFDPG 80
           IS+NIANA+T G       Y+ K  SFE+ +  +G +R        G    +        
Sbjct: 22  ISDNIANAQTAG-------YKAKESSFEQNLQQAGSLRETNPKHMAGESAGSANVRITEK 74

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
               N  G     NVNV  E   + + N++Y   +  + 
Sbjct: 75  AGSVNEDGN----NVNVTDEMIGLTKNNQMYAIAINALN 109


>gi|146307868|ref|YP_001188333.1| flagellar basal body rod protein FlgF [Pseudomonas mendocina ymp]
 gi|145576069|gb|ABP85601.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp]
          Length = 246

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 3/48 (6%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH---DMMTTTLDL 131
           SG ++  NVN + E   +   +R +  +++ ++ +      M   L +
Sbjct: 198 SGFLEASNVNAVEEMTAILSLSRQFELSVKMMRTAEDNASAMARVLQI 245


>gi|66046705|ref|YP_236546.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257412|gb|AAY38508.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078 [Pseudomonas syringae pv. syringae B728a]
 gi|330899405|gb|EGH30824.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330972415|gb|EGH72481.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aceris str. M302273PT]
 gi|330975978|gb|EGH76044.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 246

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
            SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 197 ESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|313620048|gb|EFR91563.1| flagellar hook-associated protein FlgK [Listeria innocua FSL
           S4-378]
          Length = 506

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|254496888|ref|ZP_05109736.1| flagellar basal body rod protein FlgF [Legionella drancourtii
           LLAP12]
 gi|254353907|gb|EET12594.1| flagellar basal body rod protein FlgF [Legionella drancourtii
           LLAP12]
          Length = 247

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 18/48 (37%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           SG ++  NV  + +   M    R +  ++  +    D       +L D
Sbjct: 200 SGALEGSNVQPVEQMVAMITAGRDFETHMNLMSTVSDNSQKLAQILHD 247


>gi|182680456|ref|YP_001834602.1| flagellar hook-associated protein FlgK [Beijerinckia indica
          subsp. indica ATCC 9039]
 gi|182636339|gb|ACB97113.1| flagellar hook-associated protein FlgK [Beijerinckia indica
          subsp. indica ATCC 9039]
          Length = 493

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 8/67 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L ++  +  S L+  SA   + S NIA A +TG       Y RK+I  + V   + GV V
Sbjct: 3  LTSAMGVTQSALSAFSAETSVTSRNIAGANSTGL------YSRKSI--DVVSSNNSGVEV 54

Query: 64 KKIGVDQ 70
            +   Q
Sbjct: 55 LSVTRAQ 61


>gi|332981428|ref|YP_004462869.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1
           BON]
 gi|332699106|gb|AEE96047.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1
           BON]
          Length = 137

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 31/131 (23%)

Query: 20  ARMQ--IISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------GGVRVKKI----- 66
             M+  +IS+N+AN  T G       ++   ++FE+V+ G+       G +V  I     
Sbjct: 21  LWMRNQVISDNVANVDTPG-------FKASKVAFEDVLKGALDDNALKG-KVTNIKHIPI 72

Query: 67  ----GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
                 D    V +        + +      NV++ +E AD+ +T   Y A +Q + +  
Sbjct: 73  GALSAKDVQPQVLQSQNTSMRMDGN------NVDIDLEMADLAKTTIAYNAVIQKMTKEF 126

Query: 123 DMMTTTLDLLR 133
            M+ + ++  +
Sbjct: 127 QMLRSAINGGK 137


>gi|306820110|ref|ZP_07453758.1| flagellar basal-body rod protein FlgB [Eubacterium yurii subsp.
          margaretiae ATCC 43715]
 gi|304551888|gb|EFM39831.1| flagellar basal-body rod protein FlgB [Eubacterium yurii subsp.
          margaretiae ATCC 43715]
          Length = 133

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + L   S R + IS N+AN  T         Y+RK + FEE +  S
Sbjct: 13 TALDAYSMRNESISSNLANVNTPN-------YKRKYVRFEEYLTAS 51


>gi|299131803|ref|ZP_07024998.1| flagellar hook-associated protein FlgK [Afipia sp. 1NLS2]
 gi|298591940|gb|EFI52140.1| flagellar hook-associated protein FlgK [Afipia sp. 1NLS2]
          Length = 610

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E A +      Y AN + +    DM  + L 
Sbjct: 571 SGVNIDDEMAHLLALQNAYSANARVMSTVKDMFDSLLQ 608



 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 9/56 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--SFEEVMHGSGGVRVKKI 66
          SGL    A + ++S N+AN  T G       Y RKT+         GS GV V  +
Sbjct: 2  SGLRANQAALSLVSSNVANIETPG-------YVRKTVNQVQTTTGTGSAGVSVTGV 50


>gi|268680293|ref|YP_003304724.1| flagellar basal-body rod protein FlgB [Sulfurospirillum
          deleyianum DSM 6946]
 gi|268618324|gb|ACZ12689.1| flagellar basal-body rod protein FlgB [Sulfurospirillum
          deleyianum DSM 6946]
          Length = 144

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 7/42 (16%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          GL  ++ R  +IS NIAN  T         Y+ + I FE  +
Sbjct: 15 GLNARAMRQDLISSNIANIDT-------PFYKARDIDFESAL 49


>gi|237751739|ref|ZP_04582219.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
 gi|229373105|gb|EEO23496.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
          Length = 718

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R + AN + I  S  ++ T L L
Sbjct: 676 EMSNVDLSRALTQLIVVQRGFQANSKAITTSDQILNTLLSL 716



 Score = 36.8 bits (85), Expect = 0.96,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 12/58 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          SGL      + + S NIAN  T G       ++    SF +++      +VK+I    
Sbjct: 10 SGLQAHQVALDVESNNIANVNTVG-------FKYSRASFVDMLS-----QVKQIATSP 55


>gi|213025696|ref|ZP_03340143.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. 404ty]
          Length = 93

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 7/42 (16%)

Query: 17 VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           Q   M +I+ N+AN  T G       ++R+   FE++++ +
Sbjct: 1  AQQTNMDVIANNLANVSTNG-------FKRQRAVFEDLLYQT 35


>gi|313624689|gb|EFR94646.1| flagellar hook-associated protein FlgK [Listeria innocua FSL
           J1-023]
          Length = 506

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|296445196|ref|ZP_06887156.1| fagellar hook-basal body protein [Methylosinus trichosporium OB3b]
 gi|296257370|gb|EFH04437.1| fagellar hook-basal body protein [Methylosinus trichosporium OB3b]
          Length = 413

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 17/34 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             V++  + ++M    R Y AN Q  + + ++M 
Sbjct: 374 STVDLATQLSNMIVAQRSYTANSQVFQVASEVMQ 407



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + +  G+A Q++ +  +S+NIAN+ T G    +  +     S +     +GGV
Sbjct: 7  FNTSVMGMAAQASALGAVSQNIANSGTVGYKDATTQFSTVLSSVQNGSDPAGGV 60


>gi|315497293|ref|YP_004086097.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB
          48]
 gi|315415305|gb|ADU11946.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB
          48]
          Length = 459

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 13/52 (25%)

Query: 8  AHIAN------SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
            I++      S L+  S  +  IS NIAN  TT        Y+  + SF  
Sbjct: 1  MSISSAMLSGVSALSANSTALAAISNNIANVNTTA-------YKSVSTSFAA 45



 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 18/40 (45%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +   V++  E   +    R Y A  + I  S +MM T ++
Sbjct: 417 EASTVDLSSEFTSLITIQRAYSAASKIITTSDEMMQTVIE 456


>gi|227356000|ref|ZP_03840392.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
 gi|227163988|gb|EEI48890.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
          Length = 251

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +G+++  NVN      DM    R +   ++ I  + D       LL
Sbjct: 203 AGVLEGSNVNPAEAMVDMIANARRFEMQMKVIHSADDNAQRANQLL 248


>gi|90422390|ref|YP_530760.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisB18]
 gi|90104404|gb|ABD86441.1| flagellar basal body FlaE [Rhodopseudomonas palustris BisB18]
          Length = 419

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          L  +   A S L+ QS+ M +IS+NIAN++T G       Y+  + SF+ +
Sbjct: 3  LSGALSSAISALSAQSSAMAMISDNIANSQTVG-------YKTTSASFQAL 46


>gi|227874517|ref|ZP_03992687.1| flagellar basal body rod protein FlgG [Oribacterium sinus F0268]
 gi|227839636|gb|EEJ50096.1| flagellar basal body rod protein FlgG [Oribacterium sinus F0268]
          Length = 305

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++ +   A +GL     ++ +I  NIAN  T G       Y  K   ++     SGG
Sbjct: 1  MLRAMDSAVAGLRAHQNKLDVIGNNIANVNTFGFKSQG--YSFKDTMYQTSSTSSGG 55


>gi|227328339|ref|ZP_03832363.1| flagellar basal body rod protein FlgF [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 251

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +    DM    R +   ++ I    D       +L
Sbjct: 204 GVIEGSNVNTVDTMVDMIANARRFEMQMKVISSVDDNAQRANQIL 248


>gi|296134284|ref|YP_003641531.1| flagellar hook-associated protein FlgK [Thermincola sp. JR]
 gi|296032862|gb|ADG83630.1| flagellar hook-associated protein FlgK [Thermincola potens JR]
          Length = 479

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANART 34
          M       +I    L  Q   + + + NIANA T
Sbjct: 1  MRSTFFGLNIGRQALQAQQRALDVTAHNIANANT 34


>gi|254993553|ref|ZP_05275743.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           J2-064]
          Length = 506

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|255322686|ref|ZP_05363830.1| flagellar hook-associated protein FlgK [Campylobacter showae
          RM3277]
 gi|255300247|gb|EET79520.1| flagellar hook-associated protein FlgK [Campylobacter showae
          RM3277]
          Length = 617

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 14/80 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEV 54
          M  + +S HI  SGL     ++     NI NA +       + Y R+ +       F ++
Sbjct: 1  MANIFSSLHIGVSGLDAAQTQITTTGHNITNADS-------EHYTRQRVVQSAREPFHDM 53

Query: 55 MHGSG-GVRVKKIGVDQSTF 73
              G G +V  +      F
Sbjct: 54 PGDIGTGTKVDTVVRVHDEF 73


>gi|206890142|ref|YP_002249849.1| flagellar hook basal-body protein FlgG [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742080|gb|ACI21137.1| flagellar hook basal-body protein FlgG [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 239

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NVN + E   M +  R +    +      ++    + ++ R
Sbjct: 191 QGWIENSNVNPMSEMVQMIQAIRNFDFTQRVTTNFSELAQRAVSEIAR 238


>gi|16078681|ref|NP_389500.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221309493|ref|ZP_03591340.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313818|ref|ZP_03595623.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318742|ref|ZP_03600036.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323013|ref|ZP_03604307.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|120292|sp|P24500|FLGB_BACSU RecName: Full=Flagellar basal-body rod protein flgB
 gi|142915|gb|AAA22441.1| flgB [Bacillus subtilis]
 gi|2633990|emb|CAB13491.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. subtilis str. 168]
          Length = 129

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 20/104 (19%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
           +I+ NIAN  T         Y+ K +SF+ ++      R++ I  D        D     
Sbjct: 24  VITNNIANIDTPN-------YKAKKVSFQNLLDQESS-RLEAIKTDY----RHVDFSDTD 71

Query: 84  AN----ASGIVKYP----NVNVLVETADMRETNRLYMANLQTIK 119
           +N    ASG   Y     NV+V  E  ++ +    Y A ++ + 
Sbjct: 72  SNYSIVASGDTSYQQNGNNVDVDKEMTELAQNQINYQALVERMN 115


>gi|47095271|ref|ZP_00232882.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254900059|ref|ZP_05259983.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           J0161]
 gi|254911388|ref|ZP_05261400.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254935715|ref|ZP_05267412.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           F6900]
 gi|47016342|gb|EAL07264.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258608298|gb|EEW20906.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           F6900]
 gi|293589325|gb|EFF97659.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 506

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|114762163|ref|ZP_01441631.1| putative flagellar basal body rod protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114545187|gb|EAU48190.1| putative flagellar basal body rod protein [Roseovarius sp.
           HTCC2601]
          Length = 237

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 57  GSGGVRVKKIGV----DQSTFVEE----------FDPGHPVANASGIVKYPNVNVLVETA 102
            S G  + +IG+    D    V E          +DP        G V+  NV+ +++ A
Sbjct: 146 SSNGAPIGQIGIVQPLDPGALVREGGVLFRAEAGYDPAEAPRVRQGFVESANVDPILQIA 205

Query: 103 DMRETNRLYMA 113
            M E  R Y  
Sbjct: 206 RMIEVQRAYEM 216


>gi|332311130|gb|EGJ24225.1| Flagellar hook-associated protein 1 [Listeria monocytogenes str.
           Scott A]
          Length = 494

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 457 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 494


>gi|197285509|ref|YP_002151381.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|194682996|emb|CAR43444.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
          Length = 251

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +G+++  NVN      DM    R +   ++ I  + D       LL
Sbjct: 203 AGVLEGSNVNPAEAMVDMIANARRFEMQMKVIHSADDNAQRANQLL 248


>gi|296330832|ref|ZP_06873307.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674350|ref|YP_003866022.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296151837|gb|EFG92711.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412594|gb|ADM37713.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 129

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 28/108 (25%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
           +I+ NIAN  T         Y+ K +SF+ ++      R++ I  D        D     
Sbjct: 24  VITNNIANIDTPN-------YKAKKVSFQNLLDQESS-RLEAIKTDY----RHIDFSGTD 71

Query: 84  AN------------ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           +N             +G     NV+V  E  ++ +    Y A ++ + 
Sbjct: 72  SNYSIVTSGDTSYQQNGN----NVDVDKEMTELAQNQINYQALVERMN 115


>gi|283834454|ref|ZP_06354195.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC
           29220]
 gi|291070001|gb|EFE08110.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC
           29220]
          Length = 245

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 23/46 (50%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+  +   LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDLSDSGNRLLR 243


>gi|253688971|ref|YP_003018161.1| flagellar basal-body rod protein FlgF [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755549|gb|ACT13625.1| flagellar basal-body rod protein FlgF [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 251

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +    DM    R +   ++ I    D       +L
Sbjct: 204 GVIEGSNVNTVDTMVDMIANARRFEMQMKVISSVDDNAQRANQIL 248


>gi|217965197|ref|YP_002350875.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           HCC23]
 gi|217334467|gb|ACK40261.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           HCC23]
 gi|307570244|emb|CAR83423.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes L99]
          Length = 506

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|254932015|ref|ZP_05265374.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           HPB2262]
 gi|293583567|gb|EFF95599.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           HPB2262]
 gi|328475667|gb|EGF46416.1| flagellar hook-associated protein FlgK [Listeria monocytogenes 220]
          Length = 506

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|254853091|ref|ZP_05242439.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           R2-503]
 gi|300764517|ref|ZP_07074510.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes FSL N1-017]
 gi|258606440|gb|EEW19048.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           R2-503]
 gi|300514871|gb|EFK41925.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes FSL N1-017]
          Length = 506

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|224498787|ref|ZP_03667136.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           Finland 1988]
 gi|254829362|ref|ZP_05234049.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           N3-165]
 gi|254830304|ref|ZP_05234959.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           10403S]
 gi|284801035|ref|YP_003412900.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           08-5578]
 gi|284994177|ref|YP_003415945.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           08-5923]
 gi|258601775|gb|EEW15100.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           N3-165]
 gi|284056597|gb|ADB67538.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           08-5578]
 gi|284059644|gb|ADB70583.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           08-5923]
          Length = 506

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|116872094|ref|YP_848875.1| flagellar hook-associated protein FlgK [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116740972|emb|CAK20092.1| flagellar hook-associated protein 1-related protein [Listeria
           welshimeri serovar 6b str. SLCC5334]
          Length = 506

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|38570329|gb|AAR24612.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni]
          Length = 270

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 214 NSNAIRKGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|46906956|ref|YP_013345.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|46880222|gb|AAT03522.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes serotype 4b str. F2365]
          Length = 506

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|16799788|ref|NP_470056.1| flagellar hook-associated protein FlgK [Listeria innocua Clip11262]
 gi|16413165|emb|CAC95945.1| lin0713 [Listeria innocua Clip11262]
          Length = 506

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|47091667|ref|ZP_00229463.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes str. 4b H7858]
 gi|47019986|gb|EAL10723.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes str. 4b H7858]
          Length = 494

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 457 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 494


>gi|89902474|ref|YP_524945.1| flagellar basal-body rod protein FlgB [Rhodoferax ferrireducens
          T118]
 gi|89347211|gb|ABD71414.1| flagellar basal-body rod protein FlgB [Rhodoferax ferrireducens
          T118]
          Length = 150

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 9/46 (19%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L  +  R  +I+ NIANA T G       Y  + ++F++ M  + G
Sbjct: 18 LRAERQR--VIASNIANADTPG-------YVARDLNFKDAMLQATG 54


>gi|50120640|ref|YP_049807.1| flagellar basal body rod protein FlgF [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611166|emb|CAG74612.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 251

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +    DM    R +   ++ I    D       +L
Sbjct: 204 GVIEGSNVNTVDTMVDMIANARRFEMQMKVISSVDDNAQRANQIL 248


>gi|317177869|dbj|BAJ55658.1| flagellar hook-associated protein FlgK [Helicobacter pylori F16]
          Length = 606

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA         + Y R+ +          G
Sbjct: 1  MGGILSSLNASYTGLQAHQSMVDVTGNNISNAS-------DEFYSRQRVIARPQEAYMYG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 54 TKNVNMGVDVEAIERVHD 71



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604


>gi|302389655|ref|YP_003825476.1| flagellar basal-body rod protein FlgB [Thermosediminibacter oceani
           DSM 16646]
 gi|302200283|gb|ADL07853.1| flagellar basal-body rod protein FlgB [Thermosediminibacter oceani
           DSM 16646]
          Length = 136

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 48/132 (36%), Gaps = 24/132 (18%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +  +  R ++++ NIAN  T         ++R  + FEE++         ++ +  ++  
Sbjct: 15  MDAKWMRHEVLANNIANVDTPN-------FKRSDVVFEELLQKYLKESNSRLPLKTTSEK 67

Query: 75  EEFD--PGHPVANA-----------SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
              +  P   +               G     NV++  E  ++ E    Y    + +++ 
Sbjct: 68  HISNLKPTFDLKPEIVMQHDRVLRNDGN----NVDIDKEMVELVENTLSYNIMAEQVQRQ 123

Query: 122 HDMMTTTLDLLR 133
             ++ + +   R
Sbjct: 124 FSLLRSAITEGR 135


>gi|167750705|ref|ZP_02422832.1| hypothetical protein EUBSIR_01683 [Eubacterium siraeum DSM 15702]
 gi|167656384|gb|EDS00514.1| hypothetical protein EUBSIR_01683 [Eubacterium siraeum DSM 15702]
 gi|291532044|emb|CBK97629.1| fagellar hook-basal body proteins [Eubacterium siraeum 70/3]
 gi|291558218|emb|CBL35335.1| fagellar hook-basal body proteins [Eubacterium siraeum V10Sc8a]
          Length = 242

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 11/49 (22%)

Query: 8  AHIA----NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE 52
           +IA     +GL  Q   + + S NIAN  T G       ++    SF 
Sbjct: 1  MNIAFYTGKTGLIAQQEGLNVYSNNIANVNTVG-------FKASRPSFA 42



 Score = 37.2 bits (86), Expect = 0.83,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  N ++  +   + ET R Y  + + ++ + ++   T +L
Sbjct: 200 ERSNTDIAGDMVRIIETQRSYQMSARVVQTADELERITNNL 240


>gi|297584032|ref|YP_003699812.1| flagellar basal-body rod protein FlgB [Bacillus selenitireducens
           MLS10]
 gi|297142489|gb|ADH99246.1| flagellar basal-body rod protein FlgB [Bacillus selenitireducens
           MLS10]
          Length = 134

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 22/118 (18%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQ- 70
           + L   + R   IS+N+AN  T         Y+ K   F   +  +    R++   +D  
Sbjct: 14  TSLNASARRQDTISDNVANVDTPN-------YKAKKTVFNHQLQRAMDDQRLRANRLDDR 66

Query: 71  ---------STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                    S      +  +   N +G     NV++  E ADM E    Y A +  + 
Sbjct: 67  HIEFGGPPRSDAPHIIERTNTQYNHNGN----NVDIDKEMADMAENQIYYNALIDRMN 120


>gi|58039418|ref|YP_191382.1| flagellar basal-body rod protein FlgF [Gluconobacter oxydans
          621H]
 gi|58001832|gb|AAW60726.1| Flagellar basal-body rod protein FlgF [Gluconobacter oxydans
          621H]
          Length = 246

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 7/59 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          +  S +IA S +  Q   M +++ N++NA T G       Y+R+ + F + +    G +
Sbjct: 1  MENSTYIALSRMDAQQRAMSVVAANMSNASTVG-------YKRENVLFSDFLSHQHGSK 52


>gi|321315384|ref|YP_004207671.1| flagellar basal body rod protein FlgB [Bacillus subtilis BSn5]
 gi|320021658|gb|ADV96644.1| flagellar basal body rod protein FlgB [Bacillus subtilis BSn5]
          Length = 129

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 18/103 (17%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG----VRVKKIGVDQSTFVEEFD- 78
           +I+ NIAN  T         Y+ K +SF+ ++         ++     VD S     +  
Sbjct: 24  VITNNIANIDTPN-------YKAKKVSFQNLLDQESSRLETIKTDYRHVDFSDTDSNYSI 76

Query: 79  --PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
              G      +G     NV+V  E  ++ +    Y A ++ + 
Sbjct: 77  VASGDTSYQQNGN----NVDVDKEMTELAQNQINYQALVERMN 115


>gi|241766917|ref|ZP_04764723.1| flagellar basal-body rod protein FlgB [Acidovorax delafieldii
          2AN]
 gi|241362621|gb|EER58469.1| flagellar basal-body rod protein FlgB [Acidovorax delafieldii
          2AN]
          Length = 147

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 9/46 (19%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L  +  R   I+ NIANA T G       Y  +  +F E +  + G
Sbjct: 18 LRAERQR--AIASNIANADTPG-------YVARDFNFAETLREATG 54


>gi|149203126|ref|ZP_01880097.1| hypothetical protein RTM1035_20326 [Roseovarius sp. TM1035]
 gi|149143672|gb|EDM31708.1| hypothetical protein RTM1035_20326 [Roseovarius sp. TM1035]
          Length = 237

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 62  RVKKIGVDQSTFVEE--FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           RV  I  D   F  +  F+P        G ++  NV+ + + A M E  R Y      + 
Sbjct: 163 RVGMIREDGVMFHADGGFEPVEEGVIHQGFLEGANVDPIGQVARMIEVQRAYEMGQSFLD 222

Query: 120 QSHDMMTTTLD 130
             H+ +T+ LD
Sbjct: 223 TEHERVTSALD 233


>gi|315281368|ref|ZP_07870006.1| flagellar hook-associated protein FlgK [Listeria marthii FSL
           S4-120]
 gi|313614985|gb|EFR88491.1| flagellar hook-associated protein FlgK [Listeria marthii FSL
           S4-120]
          Length = 506

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|290894002|ref|ZP_06556977.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           J2-071]
 gi|290556448|gb|EFD89987.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           J2-071]
          Length = 506

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|226223336|ref|YP_002757443.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           Clip81459]
 gi|254824015|ref|ZP_05229016.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           J1-194]
 gi|225875798|emb|CAS04501.1| Putative flagellar hook-associated protein FlgK [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|293593243|gb|EFG01004.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           J1-194]
          Length = 506

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|192360677|ref|YP_001982399.1| flagellar basal-body rod protein FlgF [Cellvibrio japonicus
           Ueda107]
 gi|190686842|gb|ACE84520.1| flagellar basal-body rod protein FlgF [Cellvibrio japonicus
           Ueda107]
          Length = 295

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G+++  NVN + E   +    R Y   ++ +K + +    +  LL+
Sbjct: 247 AGMLEASNVNAVTEFTQIMSLARQYEMQVKVMKAAEENSAASTQLLQ 293


>gi|57167708|ref|ZP_00366848.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228]
 gi|305433214|ref|ZP_07402370.1| flagellar basal-body rod protein [Campylobacter coli JV20]
 gi|57020830|gb|EAL57494.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228]
 gi|304443915|gb|EFM36572.1| flagellar basal-body rod protein [Campylobacter coli JV20]
          Length = 270

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
            +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 213 DNSNAVRQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTA 253



 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  ++ +I+ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGGMVTQFNKLDVITNNLANINTSG-------YKRDDVV 40


>gi|289433983|ref|YP_003463855.1| flagellar hook-associated protein 1-related protein [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|289170227|emb|CBH26767.1| flagellar hook-associated protein 1-related protein [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
          Length = 507

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 470 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 507


>gi|253990130|ref|YP_003041486.1| flagellar basal body rod protein FlgB [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|211639033|emb|CAR67647.1| flagellar basal-body rod protein flgb (putative proximal rod
           protein) [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781580|emb|CAQ84743.1| flagellar basal-body rod protein flgb (putative proximal rod
           protein) [Photorhabdus asymbiotica]
          Length = 137

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 31/143 (21%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
           D L A+ H     L+++S R +I+S NIANA T G       Y+ + I F   +  +   
Sbjct: 3   DKLDAAFHFQQEALSLRSRRQEILSANIANADTPG-------YQARDIDFAAQLKKTIAH 55

Query: 59  GGVRVKKIGVD---------QSTFVEEFD-----PGHPVANASGIVKYPNVNVLVETADM 104
           G V    IG+          Q     E D     P  P  + +       V++ +E ++ 
Sbjct: 56  GRVTGNGIGLTLTSDRHIPIQPQKRMEMDLLYRVPYQPAMDGN------TVDMDMERSNF 109

Query: 105 RETNRLYMANLQTI-KQSHDMMT 126
            + +  Y A L     Q   MM+
Sbjct: 110 MDNSLKYQAELTATSSQVKSMMS 132


>gi|119469956|ref|ZP_01612761.1| putative flagellar hook-associated protein [Alteromonadales
          bacterium TW-7]
 gi|119446666|gb|EAW27939.1| putative flagellar hook-associated protein [Alteromonadales
          bacterium TW-7]
          Length = 667

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANART 34
              +IA+SG+   S  +Q  S+NIAN  T
Sbjct: 3  FNLLNIASSGVRANSELLQTTSKNIANVNT 32


>gi|15646166|ref|NP_208350.1| flagellar basal body rod protein FlgB [Helicobacter pylori 26695]
 gi|217031712|ref|ZP_03437216.1| hypothetical protein HPB128_155g25 [Helicobacter pylori B128]
 gi|298737152|ref|YP_003729682.1| flagellar basal-body rod protein FlgB [Helicobacter pylori B8]
 gi|2314742|gb|AAD08599.1| flagellar basal-body rod protein (flgB) [Helicobacter pylori 26695]
 gi|216946559|gb|EEC25159.1| hypothetical protein HPB128_155g25 [Helicobacter pylori B128]
 gi|298356346|emb|CBI67218.1| flagellar basal-body rod protein FlgB [Helicobacter pylori B8]
          Length = 140

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  +S R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYKALDYRSLRQDMIASNIANVDT-------PFYRPKDLDFESVLAK--- 49

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---------------------VANASGIVKYPNVNVLV 99
            +  +I  +QS+ V      +P                     +A   G     +V++ +
Sbjct: 50  -KKAEIFENQSSKVLPLAHTNPRHLDFENSAKDGASLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKN 139


>gi|16802747|ref|NP_464232.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           EGD-e]
 gi|224501990|ref|ZP_03670297.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           R2-561]
 gi|16410094|emb|CAC98783.1| lmo0705 [Listeria monocytogenes EGD-e]
          Length = 506

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|148266109|ref|YP_001232815.1| flagellar hook-associated protein FlgK [Geobacter uraniireducens
          Rf4]
 gi|146399609|gb|ABQ28242.1| flagellar hook-associated protein FlgK [Geobacter uraniireducens
          Rf4]
          Length = 478

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 14/64 (21%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SGGVRVKK 65
          + L  Q   +++  ENI N  TTG       Y R+T   E              GV+V  
Sbjct: 12 TALNAQKLALEVTGENITNVNTTG-------YSRQTTILETAPTTLERGFPLGSGVKVAA 64

Query: 66 IGVD 69
          +   
Sbjct: 65 VQRS 68


>gi|322378470|ref|ZP_08052922.1| flagellar hook protein FlgE [Helicobacter suis HS1]
 gi|321149114|gb|EFX43562.1| flagellar hook protein FlgE [Helicobacter suis HS1]
          Length = 718

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|315452912|ref|YP_004073182.1| flagellar hook protein FlgE [Helicobacter felis ATCC 49179]
 gi|315131964|emb|CBY82592.1| flagellar hook protein FlgE [Helicobacter felis ATCC 49179]
          Length = 718

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|322380221|ref|ZP_08054447.1| flagellar hook protein FlgE [Helicobacter suis HS5]
 gi|321147348|gb|EFX42022.1| flagellar hook protein FlgE [Helicobacter suis HS5]
          Length = 619

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 579 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 617


>gi|161620214|ref|YP_001594100.1| flagellar basal body rod protein FlgF [Brucella canis ATCC 23365]
 gi|161337025|gb|ABX63329.1| flagellar basal body rod protein [Brucella canis ATCC 23365]
          Length = 233

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 25/95 (26%)

Query: 58  SGGVRVKKIG--VDQSTFVEEF---------DPGHPVANAS------GIVKYPNVNVLVE 100
             GV+V  IG     +     +          P  PV + +      G+++  NV+ + E
Sbjct: 137 QNGVQVGVIGLYTIPADADLAYAGTSGVIPSKPAQPVVDDNSVGVVQGMIEGSNVDAMTE 196

Query: 101 TADMRETNRLYM--ANL------QTIKQSHDMMTT 127
              +   +R +    NL         +    + + 
Sbjct: 197 MTRLISISRAFEQVNNLLSQQEATVSEAIKTLGSK 231


>gi|32477561|ref|NP_870555.1| flagellar hook protein FlgE [Rhodopirellula baltica SH 1]
 gi|32448115|emb|CAD77632.1| flagellar hook protein FlgE [Rhodopirellula baltica SH 1]
 gi|327543123|gb|EGF29559.1| flagellar hook protein FlgE [Rhodopirellula baltica WH47]
          Length = 811

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          L ++   A +GL+    ++ +I  N+ANA+T G       ++     F  
Sbjct: 3  LQSALTTALTGLSAAETQIDVIGNNLANAQTVG-------FKSSDAVFAT 45


>gi|46205476|ref|ZP_00048498.2| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 241

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 6/56 (10%)

Query: 79  PGHPVAN------ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           PG PV +        G ++  NVN ++E   +    R + +      ++ + +T  
Sbjct: 178 PGQPVQDFTRLGIVQGYIEGANVNPILEMTKLIAIQRAFESAATMTSEAENTLTGA 233



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 7/77 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S ++A S       R+   + N+AN  T G       +R + +SF E++  S    V
Sbjct: 1  MQNSLYVALSSQIALEKRLTTTANNVANMATAG-------FRAEEVSFSELLAKSSRGDV 53

Query: 64 KKIGVDQSTFVEEFDPG 80
            +   ++       P 
Sbjct: 54 AFVDAGKTALSRVAGPT 70


>gi|325927055|ref|ZP_08188325.1| hypothetical protein XPE_2325 [Xanthomonas perforans 91-118]
 gi|325542554|gb|EGD14026.1| hypothetical protein XPE_2325 [Xanthomonas perforans 91-118]
          Length = 98

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 31/126 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+ V + R Q+ + N+A          + P  R+++        +GGV   
Sbjct: 1   MSISSIASSGMQVAALRQQVAASNVA-----RQPVDASP--RQSV--AATTQANGGVAAS 51

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  +        DP  P  +                 +       + AN   +++S +M
Sbjct: 52  VVNANA-------DPSAPAGD---------------LVEGLSARNDFQANANVLRRSDEM 89

Query: 125 MTTTLD 130
           + + LD
Sbjct: 90  LGSLLD 95


>gi|320354350|ref|YP_004195689.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus
           DSM 2032]
 gi|320122852|gb|ADW18398.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus
           DSM 2032]
          Length = 465

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           Y  V++  E  D+ +  R + ++ + +    +MM   L L
Sbjct: 424 YSGVSLEEEMIDLIQYQRGFESSAKFLATVDEMMNALLQL 463


>gi|253998491|ref|YP_003050554.1| flagellar basal-body rod protein FlgB [Methylovorus sp. SIP3-4]
 gi|313200566|ref|YP_004039224.1| flagellar basal-body rod protein flgb [Methylovorus sp. MP688]
 gi|253985170|gb|ACT50027.1| flagellar basal-body rod protein FlgB [Methylovorus sp. SIP3-4]
 gi|312439882|gb|ADQ83988.1| flagellar basal-body rod protein FlgB [Methylovorus sp. MP688]
          Length = 142

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 24/147 (16%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M+ L A+     S L V++ R ++I+ NIANA T         Y+ + I+F + ++ +  
Sbjct: 1   MNRLDAALAFQQSALRVRAQRQELIAANIANADTPN-------YKARDINFNDALNNALS 53

Query: 59  ------GGVRVKKIGV---DQSTFVEEFDPGH-PVANA-----SGIVKYPNVNVLVETAD 103
                  G+ V K             ++ P   P          G V    V++ VE   
Sbjct: 54  GNDTPGSGLDVSKTSSAHLSGDPTSVDYVPTGKPGEPMFRPLIQGSVDGNTVDMDVERNQ 113

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLD 130
             +    Y A+L  I      + + + 
Sbjct: 114 FTDNAIRYEASLNMINGQIKKLLSAIQ 140


>gi|229109210|ref|ZP_04238809.1| Flagellar hook protein flgE [Bacillus cereus Rock1-15]
 gi|228674220|gb|EEL29465.1| Flagellar hook protein flgE [Bacillus cereus Rock1-15]
          Length = 406

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNS 49



 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 85  NASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N +G V+       NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 353 NGAGKVRGSAQEGANVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 406


>gi|313639049|gb|EFS04037.1| flagellar hook-associated protein FlgK [Listeria seeligeri FSL
           S4-171]
          Length = 507

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 470 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 507


>gi|238764389|ref|ZP_04625339.1| Flagellar basal-body rod protein flgB [Yersinia kristensenii ATCC
           33638]
 gi|238697415|gb|EEP90182.1| Flagellar basal-body rod protein flgB [Yersinia kristensenii ATCC
           33638]
          Length = 137

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 25/126 (19%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQSTF 73
           L  Q    +I+S NIANA T G       ++ + I F   +       RV   GV  S  
Sbjct: 18  LRAQRQ--EILSSNIANADTPG-------FQARDIDFSSQLKKVMEQGRVNGTGVSLSLT 68

Query: 74  VEEFDPGH----PVANASGIVKYPN--------VNVLVETADMRETNRLYMANLQTI-KQ 120
                P      P  +   + + P+        V++  E  +  + +  Y  +L  +  Q
Sbjct: 69  SARHIPASTVQPPDLDL--LFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTVLGGQ 126

Query: 121 SHDMMT 126
              MM+
Sbjct: 127 IKGMMS 132


>gi|319649570|ref|ZP_08003726.1| flagellar basal-body rod protein B [Bacillus sp. 2_A_57_CT2]
 gi|317398732|gb|EFV79414.1| flagellar basal-body rod protein B [Bacillus sp. 2_A_57_CT2]
          Length = 131

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 23/119 (19%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
           +IS+NIANA T         Y+ K  SF+E    +    ++       + +  +D  + +
Sbjct: 24  VISQNIANADTPN-------YKAKDASFKEAFQSA----LEGSMEANKSDIRHYDFKNGL 72

Query: 84  ANASGIVKYPN---------VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++A G++   N         V+V  E A++      Y A    I++     ++  ++LR
Sbjct: 73  SSAQGVITKRNASYNHNGNSVDVDKEMAELATNQIYYNA---VIERVSGKFSSLQNVLR 128


>gi|291562058|emb|CBL40874.1| flagellar hook-associated protein FlgK [butyrate-producing
          bacterium SS3/4]
          Length = 557

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDT 38
           +  + A S L     R+ I  +N++N  T G T
Sbjct: 6  FSGFNTALSALQANQKRLDITGQNLSNMNTAGYT 39


>gi|188576753|ref|YP_001913682.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|188576944|ref|YP_001913873.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|188521205|gb|ACD59150.1| flagellar basal-body rod protein FlgB [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|188521396|gb|ACD59341.1| flagellar basal-body rod protein FlgB [Xanthomonas oryzae pv.
          oryzae PXO99A]
          Length = 117

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           RM++I+ N++N  T G       Y+ K ++FE  +  + G
Sbjct: 6  QRMKLIASNLSNVDTPG-------YKAKDLNFEAALKSAQG 39


>gi|308050018|ref|YP_003913584.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM
          9799]
 gi|307632208|gb|ADN76510.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM
          9799]
          Length = 457

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 11/60 (18%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----SGGVRVKKIGV 68
          SGL      +   S NIANA     TPG   Y R+ +       G      GV+V  +  
Sbjct: 9  SGLHAAQMHLATTSNNIANA----TTPG---YSRQQLLVSARPGGFMGAGSGVQVDGVRR 61



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  ++    + Y AN + I  +  +  T + +
Sbjct: 418 SAVNLDEEGINIIVYQQAYQANAKVISTADQLFQTMMTM 456


>gi|229827759|ref|ZP_04453828.1| hypothetical protein GCWU000182_03151 [Abiotrophia defectiva ATCC
          49176]
 gi|229787958|gb|EEP24072.1| hypothetical protein GCWU000182_03151 [Abiotrophia defectiva ATCC
          49176]
          Length = 633

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 7/46 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
          L+ S  +  SGL      +   + NI NA T G       Y R+ +
Sbjct: 3  LMTSFGVGVSGLNAAQNSLNATAHNITNADTKG-------YVRQQV 41


>gi|157738165|ref|YP_001490849.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018]
 gi|157700019|gb|ABV68179.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018]
          Length = 723

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 39/102 (38%), Gaps = 8/102 (7%)

Query: 38  TPGSDPYRRKTISFEEVMHGSG--GVRVKKIGVDQSTFVEEFDPGHPVANASGI----VK 91
           T G   Y    +S     +  G   V        Q +    +   +   N +G+    ++
Sbjct: 624 TEGGVQYAVGQVSIARFTNNQGLLAVGNNNFQATQESGKAIYSTNN--NNTAGMQGKTLE 681

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               ++     ++    R + AN ++I  + +M+TT ++L R
Sbjct: 682 LSEADLSESLVNLMVFQRAFEANAKSITTADEMLTTLINLKR 723



 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 7/47 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          SGLA Q+  +   S N+AN  T G       Y+   ISF + ++ + 
Sbjct: 10 SGLASQTTAIDNESNNVANVNTVG-------YKASRISFADQIYQNQ 49


>gi|163744345|ref|ZP_02151705.1| Flagellar hook-associated protein [Oceanibulbus indolifex HEL-45]
 gi|161381163|gb|EDQ05572.1| Flagellar hook-associated protein [Oceanibulbus indolifex HEL-45]
          Length = 468

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 7/47 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          + ++ +IA SGL+    R  +++ NIANA+T G       Y R+   
Sbjct: 3  ISSAFNIARSGLSTTEGRASLVAGNIANAQTEG-------YARREAV 42


>gi|109899405|ref|YP_662660.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas atlantica
           T6c]
 gi|109701686|gb|ABG41606.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas atlantica
           T6c]
          Length = 133

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 22/126 (17%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           + RM++++ N+ANA T G       Y+ + I+F++ M  +   R + +       ++   
Sbjct: 20  TERMEVLAGNLANANTPG-------YKARDINFQDAMRSAQNSRNQNLTRTHENHIKGHM 72

Query: 79  PGH----------PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G           P     G     NV+V VE     +    Y A+++ +      M   
Sbjct: 73  QGSGEVQFRINNQPDT-GDGN----NVDVQVERNAFLDNGLRYQASVEFLNGKIKGMKKA 127

Query: 129 LDLLRD 134
           +   ++
Sbjct: 128 IGGGQN 133


>gi|315453582|ref|YP_004073852.1| putative flagellar hook-associated protein [Helicobacter felis
          ATCC 49179]
 gi|315132634|emb|CBY83262.1| putative flagellar hook-associated protein [Helicobacter felis
          ATCC 49179]
          Length = 606

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 14/81 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------E 53
          M  +++S + + +GL      + +   NI+NA         + Y R+ +           
Sbjct: 1  MGGILSSLNTSYTGLQAHQVMVDVTGNNISNAN-------DEFYSRQRVIARPQNSLAFT 53

Query: 54 VMHGSGGVRVKKIGVDQSTFV 74
            + + GV V+ I      FV
Sbjct: 54 DRNVNMGVNVETIQRVHDEFV 74



 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+   E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SGVSTDEEMVNLIKYQGGYAANAKVITAIDRMIETLLGM 604


>gi|227873524|ref|ZP_03991769.1| flagellar basal-body rod protein [Oribacterium sinus F0268]
 gi|227840614|gb|EEJ50999.1| flagellar basal-body rod protein [Oribacterium sinus F0268]
          Length = 256

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD-MMTTTLDLLR 133
           +++  NVN++ E   M  + R   +  Q ++     M   + D+ R
Sbjct: 210 MLEKSNVNMVDEMTTMMSSQRALQSAAQMLRMYDTVMAKASSDVGR 255


>gi|94500242|ref|ZP_01306775.1| flagellar basal-body rod protein FlgF [Oceanobacter sp. RED65]
 gi|94427541|gb|EAT12518.1| flagellar basal-body rod protein FlgF [Oceanobacter sp. RED65]
          Length = 249

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ASG V+  NV+ +     +   +R Y   ++ +  + +   TT  ++
Sbjct: 200 ASGYVEGSNVSAVHSLTQIMSLHRQYEMQVKMMSTADENAQTTASIM 246


>gi|127512276|ref|YP_001093473.1| flagellar basal body rod protein FlgB [Shewanella loihica PV-4]
 gi|126637571|gb|ABO23214.1| flagellar basal-body rod protein FlgB [Shewanella loihica PV-4]
          Length = 132

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 7/40 (17%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          SAR ++IS NIANA T         Y+ K + F++ +  +
Sbjct: 20 SARAEVISSNIANADTPH-------YKAKDLDFDKALQAA 52


>gi|322378745|ref|ZP_08053174.1| flagellar hook-associated protein FlgK [Helicobacter suis HS1]
 gi|321148775|gb|EFX43246.1| flagellar hook-associated protein FlgK [Helicobacter suis HS1]
          Length = 606

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 14/81 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------E 53
          M  +++S + + +GL      + +   NI+NA           Y R+ +           
Sbjct: 1  MGGILSSLNTSYTGLQAHQVMVDVTGNNISNAN-------DPFYSRQRVIATPQSTLMYT 53

Query: 54 VMHGSGGVRVKKIGVDQSTFV 74
            + + GV V+ I      FV
Sbjct: 54 NRNMNMGVNVQSIQRVHDDFV 74



 Score = 35.7 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+   E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SGVSSDEEMVNLIKFQSGYAANAKVITAIDRMIETLLGI 604


>gi|322380594|ref|ZP_08054746.1| flagellar hook-associated protein FlgK [Helicobacter suis HS5]
 gi|321146916|gb|EFX41664.1| flagellar hook-associated protein FlgK [Helicobacter suis HS5]
          Length = 606

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 14/81 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-------E 53
          M  +++S + + +GL      + +   NI+NA           Y R+ +           
Sbjct: 1  MGGILSSLNTSYTGLQAHQVMVDVTGNNISNAN-------DPFYSRQRVIATPQSTLMYT 53

Query: 54 VMHGSGGVRVKKIGVDQSTFV 74
            + + GV V+ I      FV
Sbjct: 54 NRNMNMGVNVQSIQRVHDDFV 74



 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+   E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SGVSSDEEMVNLIKFQSGYAANAKVITAIDRMIETLLGI 604


>gi|89069819|ref|ZP_01157154.1| putative flagellar basal body rod protein [Oceanicola granulosus
          HTCC2516]
 gi|89044620|gb|EAR50736.1| putative flagellar basal body rod protein [Oceanicola granulosus
          HTCC2516]
          Length = 239

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 10/47 (21%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          SGL  +   M++I+ NIANA TTG       YR + + F E +   G
Sbjct: 13 SGLMAE---MRLIANNIANAATTG-------YRSEGVIFSEYVSALG 49



 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 17/90 (18%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK-------IGVDQSTFVEE--FDPGHP 82
           A +    P                   G V V +       +  D   F  E  F+P   
Sbjct: 135 AASVTVAPDG--------VLSADGQPLGQVGVVRPRDPAGLVREDGVRFRAEGGFEPVPR 186

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYM 112
           V  A G ++  NV+ +++ A M E  R Y 
Sbjct: 187 VRVAQGFLEESNVDPILQVARMIEVQRAYE 216


>gi|91791415|ref|YP_561066.1| protein of unknown function DUF1078-like protein [Shewanella
          denitrificans OS217]
 gi|91713417|gb|ABE53343.1| protein of unknown function DUF1078-like protein [Shewanella
          denitrificans OS217]
          Length = 253

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +I + +IA SGL  +  ++  I+ NIAN      TPG   Y+   +SF  V+ 
Sbjct: 1  MIDALYIAESGLDAKQKQLDAIAHNIANV----STPG---YKTSQMSFMTVVQ 46


>gi|255523707|ref|ZP_05390673.1| flagellar basal-body rod protein FlgB [Clostridium
          carboxidivorans P7]
 gi|296186711|ref|ZP_06855113.1| flagellar basal-body rod protein FlgB [Clostridium
          carboxidivorans P7]
 gi|255512576|gb|EET88850.1| flagellar basal-body rod protein FlgB [Clostridium
          carboxidivorans P7]
 gi|296048748|gb|EFG88180.1| flagellar basal-body rod protein FlgB [Clostridium
          carboxidivorans P7]
          Length = 133

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          GL   + R +  ++NIAN  T G       Y+RK ++FEE +  +
Sbjct: 19 GLDASTERSKATADNIANINTKG-------YKRKYVTFEETLQSN 56


>gi|163785675|ref|ZP_02180209.1| hypothetical protein HG1285_10435 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879056|gb|EDP73026.1| hypothetical protein HG1285_10435 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 125

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 37/134 (27%)

Query: 1   MDYLIASAH-IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M +L      I+ +  +    R +II  NIANA T         Y+ K + FE+V++ + 
Sbjct: 1   MSFLWNDLDKISETA-SYFLERTKIIQSNIANADTPN-------YKPKDLVFEKVLNEN- 51

Query: 60  GVRVKKIGVDQSTFVEEFDPGH--PV----------ANA--SGIVKYPNVNVLVETADMR 105
                ++  D        DP H  P            ++  SG      V+V  E A + 
Sbjct: 52  ----IQLKKD--------DPRHLSPDTKLEIKKYIVEDSYYSGY-DKNKVDVEHELAKLS 98

Query: 106 ETNRLYMANLQTIK 119
           E++ +Y   L+ +K
Sbjct: 99  ESSIMYKTLLEVMK 112


>gi|229058387|ref|ZP_04196771.1| Flagellar hook protein flgE [Bacillus cereus AH603]
 gi|228719896|gb|EEL71486.1| Flagellar hook protein flgE [Bacillus cereus AH603]
          Length = 407

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNS 49



 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 368 NVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|309388814|gb|ADO76694.1| flagellar basal-body rod protein FlgB [Halanaerobium praevalens DSM
           2228]
          Length = 128

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 12/102 (11%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----GSGGVRV 63
             I    LA  + R ++I+ N+AN      TPG   Y+R+ I F+  +         V +
Sbjct: 4   LEIITRALAGSARRGELIANNLANV----STPG---YKRQDIDFKSALKKEISAKNSVSL 56

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPN-VNVLVETADM 104
           K    +   F +++   +   N        N V+V VE A++
Sbjct: 57  KTTRKNHLPFSKQYRSLNGNENNRSYRNDDNSVDVDVEMAEL 98


>gi|291276324|ref|YP_003516096.1| flagellar hook subunit protein [Helicobacter mustelae 12198]
 gi|290963518|emb|CBG39349.1| flagellar hook subunit protein [Helicobacter mustelae 12198]
          Length = 705

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R + AN + +  S  ++ T L L
Sbjct: 663 EMSNVDLSRSLTQLIVVQRGFQANSKAVTTSDQILNTLLSL 703



 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 15 LAVQSARMQIISENIANARTTG 36
          +      + + S NIAN  TTG
Sbjct: 1  MQAHQVALDVESNNIANVNTTG 22


>gi|224370754|ref|YP_002604918.1| putative flagellar hook-associated protein [Desulfobacterium
          autotrophicum HRM2]
 gi|223693471|gb|ACN16754.1| putative flagellar hook-associated protein [Desulfobacterium
          autotrophicum HRM2]
          Length = 1268

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANAR 33
          M  + ++ +IA   +A Q   + +   NIAN  
Sbjct: 1  MAGISSTLNIAQGAIAAQQYGLNVTGNNIANVN 33


>gi|222095377|ref|YP_002529437.1| flagellar hook protein flge [Bacillus cereus Q1]
 gi|221239435|gb|ACM12145.1| flagellar hook protein [Bacillus cereus Q1]
 gi|324325771|gb|ADY21031.1| flagellar hook protein FlgE [Bacillus thuringiensis serovar
          finitimus YBT-020]
          Length = 406

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG-------YKKQKAMFDDLLYNNS 49



 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 367 NVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 406


>gi|256059629|ref|ZP_05449826.1| flagellar basal body rod protein FlgF [Brucella neotomae 5K33]
 gi|261323599|ref|ZP_05962796.1| flagellar basal body rod protein FlgF [Brucella neotomae 5K33]
 gi|261299579|gb|EEY03076.1| flagellar basal body rod protein FlgF [Brucella neotomae 5K33]
          Length = 243

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 25/95 (26%)

Query: 58  SGGVRVKKIG--VDQSTFVEEF---------DPGHPVANAS------GIVKYPNVNVLVE 100
             GV+V  IG     +     +          P  PV + +      G+++  NV+ + E
Sbjct: 147 QNGVQVGAIGLYTIPADADLAYAGTSGVIPSKPAQPVVDDNSVGVVQGMIESSNVDAMTE 206

Query: 101 TADMRETNRLYM--ANL------QTIKQSHDMMTT 127
              +   +R +    NL         +    + + 
Sbjct: 207 MTRLISISRAFEQVNNLLSQQEATVSEAIKTLGSK 241


>gi|238796905|ref|ZP_04640409.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
           43969]
 gi|238719165|gb|EEQ10977.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
           43969]
          Length = 251

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 19/45 (42%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G ++  NV+ +    DM  T R +  N++ I    D       LL
Sbjct: 204 GALESSNVSPVKSMVDMIATARGFDMNMKVISAVDDNDKKANQLL 248



 Score = 37.6 bits (87), Expect = 0.64,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 10/64 (15%)

Query: 13 SGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
          + +   +A +    ++S N+ANA TTG       +R +  +F  V      V+ + +  +
Sbjct: 7  TAMGAANAALNRQGVVSNNLANASTTG-------FRAQLSAFRAVPVEGPSVQTRTLVTE 59

Query: 70 QSTF 73
           + +
Sbjct: 60 STPY 63


>gi|307721136|ref|YP_003892276.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM
          16294]
 gi|306979229|gb|ADN09264.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM
          16294]
          Length = 273

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPG 40
          + +G+  Q  R+  I+ N+AN  T G    
Sbjct: 8  SAAGMVTQFNRLDTIANNLANVNTNGFKED 37


>gi|207108617|ref|ZP_03242779.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1]
          Length = 294

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 254 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 292


>gi|163785037|ref|ZP_02179764.1| flagellar hook-associated protein [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879693|gb|EDP73470.1| flagellar hook-associated protein [Hydrogenivirga sp. 128-5-R1-1]
          Length = 166

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   VNV  E  ++ +  R Y +  + I  + +++ T L L++
Sbjct: 124 EKSGVNVDEELVNLMKYQRAYQSAAKIINVTDELLQTILGLVK 166


>gi|84502400|ref|ZP_01000536.1| flagellar basal-body rod protein flgB [Oceanicola batsensis
          HTCC2597]
 gi|84389212|gb|EAQ02009.1| flagellar basal-body rod protein flgB [Oceanicola batsensis
          HTCC2597]
          Length = 133

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 15/54 (27%)

Query: 19 SARMQ-------IISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVRVK 64
          S RM        +I++N+AN+ T G       Y+ + +S F EV+ G+GG  V+
Sbjct: 13 SRRMNWLGARQQVIAQNVANSDTPG-------YKARDVSNFAEVLRGAGGAGVR 59


>gi|330502735|ref|YP_004379604.1| flagellar basal body rod protein FlgF [Pseudomonas mendocina NK-01]
 gi|328917021|gb|AEB57852.1| flagellar basal body rod protein FlgF [Pseudomonas mendocina NK-01]
          Length = 246

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 3/48 (6%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH---DMMTTTLDL 131
           SG ++  NVN + E   +   +R +  +++ ++ +      M   L +
Sbjct: 198 SGFLEASNVNAVEEMTAILSLSRQFELSVKMMRTAEDNSSAMARVLQI 245


>gi|325982370|ref|YP_004294772.1| flagellar basal-body rod protein FlgF [Nitrosomonas sp. AL212]
 gi|325531889|gb|ADZ26610.1| flagellar basal-body rod protein FlgF [Nitrosomonas sp. AL212]
          Length = 247

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVNV+ E   M    R +   ++ ++ +         ++
Sbjct: 198 DGTLEGSNVNVVHEMVSMIALARQFDMQMKMLENAERNAQQASQIM 243


>gi|54294164|ref|YP_126579.1| flagellar basal body rod protein FlgF [Legionella pneumophila str.
           Lens]
 gi|53753996|emb|CAH15467.1| flagellar biosynthesis protein FlgF [Legionella pneumophila str.
           Lens]
          Length = 248

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NVN + +   M    R + A ++ +    D       LL+
Sbjct: 200 QSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNGQKLAQLLQ 247


>gi|54297183|ref|YP_123552.1| flagellar basal body rod protein FlgF [Legionella pneumophila str.
           Paris]
 gi|53750968|emb|CAH12379.1| flagellar biosynthesis protein FlgF [Legionella pneumophila str.
           Paris]
          Length = 248

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NVN + +   M    R + A ++ +    D       LL+
Sbjct: 200 QSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNGQKLAQLLQ 247


>gi|307721502|ref|YP_003892642.1| flagellar hook-associated protein FlgK [Sulfurimonas autotrophica
          DSM 16294]
 gi|306979595|gb|ADN09630.1| flagellar hook-associated protein FlgK [Sulfurimonas autotrophica
          DSM 16294]
          Length = 626

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 14/73 (19%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
          M  +  +  I  SGL+     +     NIANA        ++ Y R+ +           
Sbjct: 1  MASIFNTLSIGYSGLSTAQVGINTTGHNIANAE-------NEGYTRQRVVTSAANPLITS 53

Query: 54 VMHGSGGVRVKKI 66
                GV V+ I
Sbjct: 54 AGDVGNGVEVQDI 66



 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V++  E  ++ +    Y A  + I     MM T L +
Sbjct: 588 VSIDEEMTNLIKYQTSYGAAAKVITTVDQMMQTLLGI 624


>gi|148358807|ref|YP_001250014.1| flagellar basal body rod protein FlgF [Legionella pneumophila str.
           Corby]
 gi|296106852|ref|YP_003618552.1| flagellar basal-body rod protein FlgF [Legionella pneumophila
           2300/99 Alcoy]
 gi|148280580|gb|ABQ54668.1| flagellar basal body rod protein FlgF [Legionella pneumophila str.
           Corby]
 gi|295648753|gb|ADG24600.1| flagellar basal-body rod protein FlgF [Legionella pneumophila
           2300/99 Alcoy]
          Length = 248

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NVN + +   M    R + A ++ +    D       LL+
Sbjct: 200 QSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNGQKLAQLLQ 247


>gi|119503641|ref|ZP_01625724.1| Flagellar basal-body rod protein FlgB [marine gamma
          proteobacterium HTCC2080]
 gi|119460703|gb|EAW41795.1| Flagellar basal-body rod protein FlgB [marine gamma
          proteobacterium HTCC2080]
          Length = 133

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 7/59 (11%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M     +  I+   LA++S RM ++S NIANA T         Y+ + I F   M  + 
Sbjct: 1  MAGFDNALGISPQVLALRSQRMNLLSANIANAETPN-------YKARDIDFRAAMTQAS 52


>gi|315636308|ref|ZP_07891558.1| flagellar hook protein FlgE [Arcobacter butzleri JV22]
 gi|315479397|gb|EFU70080.1| flagellar hook protein FlgE [Arcobacter butzleri JV22]
          Length = 723

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 39/102 (38%), Gaps = 8/102 (7%)

Query: 38  TPGSDPYRRKTISFEEVMHGSG--GVRVKKIGVDQSTFVEEFDPGHPVANASGI----VK 91
           T G   Y    +S     +  G   V        Q +    +   +   N +G+    ++
Sbjct: 624 TEGGVQYAVGQVSIARFTNNQGLLAVGNNNFQATQESGKAIYSTNN--NNTAGMQGKTLE 681

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               ++     ++    R + AN ++I  + +M+TT ++L R
Sbjct: 682 LSEADLSESLVNLMVFQRAFEANAKSITTADEMLTTLINLKR 723



 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 7/47 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          SGLA Q+  +   S N+AN  T G       Y+   ISF + ++ + 
Sbjct: 10 SGLASQTTAIDNESNNVANVNTVG-------YKASRISFADQIYQNQ 49


>gi|170737039|ref|YP_001778299.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia
           MC0-3]
 gi|169819227|gb|ACA93809.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia
           MC0-3]
          Length = 241

 Score = 39.1 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E        R +   ++  K + +M      L+R
Sbjct: 195 GHLEASNVSAVEEMMQTMSLTRSFEMQMKLYKVADEMADAGNRLIR 240


>gi|30248323|ref|NP_840393.1| flagellar basal body rod protein FlgF [Nitrosomonas europaea ATCC
           19718]
 gi|30138209|emb|CAD84217.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 247

 Score = 39.1 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVNV+ E   M    R +   ++ ++ +        +++
Sbjct: 198 DGALESSNVNVISEMVKMITLARQFDMQMKMLENAQQNAQQAGEIM 243


>gi|302390139|ref|YP_003825960.1| flagellar hook-associated protein FlgK [Thermosediminibacter
          oceani DSM 16646]
 gi|302200767|gb|ADL08337.1| flagellar hook-associated protein FlgK [Thermosediminibacter
          oceani DSM 16646]
          Length = 465

 Score = 39.1 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 24/78 (30%), Gaps = 21/78 (26%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE----------- 53
               IA   L  Q    + +S N+ANA T G       Y R+    E            
Sbjct: 5  FFGIEIAKRALFAQQRAQENVSHNVANANTPG-------YSRQRPVMEATYTKPWAGMYT 57

Query: 54 ---VMHGSGGVRVKKIGV 68
              +    GVRV  I  
Sbjct: 58 AAGAVQAGTGVRVADIVR 75


>gi|296133052|ref|YP_003640299.1| flagellar basal-body rod protein FlgB [Thermincola sp. JR]
 gi|296031630|gb|ADG82398.1| flagellar basal-body rod protein FlgB [Thermincola potens JR]
          Length = 138

 Score = 39.1 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L   S R + I+ N+AN  T G       Y+R  ++FEE +  +
Sbjct: 17 ALDAASMRNEAIANNMANVDTPG-------YKRVDVAFEEELKKA 54


>gi|77918753|ref|YP_356568.1| flagellar hook-associated protein [Pelobacter carbinolicus DSM
           2380]
 gi|77544836|gb|ABA88398.1| flagellar hook-associated protein [Pelobacter carbinolicus DSM
           2380]
          Length = 464

 Score = 39.1 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V++  E  ++ +  R + A+ + +    +MM T L L R
Sbjct: 426 VSLEEEMINLIQYQRGFEASAKLLTTVDEMMDTVLSLKR 464


>gi|34557691|ref|NP_907506.1| hypothetical protein WS1332 [Wolinella succinogenes DSM 1740]
 gi|34483408|emb|CAE10406.1| hypothetical protein WS1332 [Wolinella succinogenes]
          Length = 94

 Score = 39.1 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 38/124 (30%), Gaps = 32/124 (25%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             I  S +   S+ M   S N+AN  T G              F  +         + I 
Sbjct: 1   MQINASSIQAHSSWMNNSSHNVANVNTQG--------------FGALQTNLEESPTQGIT 46

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            + S                        ++  E  +     R   AN QTIK  HD++ T
Sbjct: 47  ANSSKGEGA------------------TDLAKELPEQMIAERGIEANAQTIKTYHDVLGT 88

Query: 128 TLDL 131
            LDL
Sbjct: 89  VLDL 92


>gi|192290682|ref|YP_001991287.1| flagellar basal body rod protein [Rhodopseudomonas palustris TIE-1]
 gi|192284431|gb|ACF00812.1| flagellar basal body rod protein [Rhodopseudomonas palustris TIE-1]
          Length = 244

 Score = 38.8 bits (90), Expect = 0.23,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 91  KYPNVNVLVETADMRETNRLYM--ANL 115
           +  NVN + E +D+    R Y   AN+
Sbjct: 200 ERSNVNSIREMSDLVAATRAYEQVANV 226


>gi|316932791|ref|YP_004107773.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           DX-1]
 gi|315600505|gb|ADU43040.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           DX-1]
          Length = 623

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E A +      Y AN + +   + M  + + 
Sbjct: 584 SGVNMDEEMAHLLSLQNAYAANARVMSTINQMYQSLMQ 621



 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 9/65 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--GGV 61
          L  +  IA +GL V  A M ++S N+ANA T G       Y RKT++    + G    GV
Sbjct: 3  LGDALSIAMAGLRVNQASMSLVSSNVANAETPG-------YVRKTVNQGVTVSGQTGTGV 55

Query: 62 RVKKI 66
          +V  I
Sbjct: 56 QVNGI 60


>gi|15645489|ref|NP_207664.1| flagellar hook protein FlgE [Helicobacter pylori 26695]
 gi|2506418|sp|P50610|FLGE_HELPY RecName: Full=Flagellar hook protein flgE
 gi|2313997|gb|AAD07911.1| flagellar hook (flgE) [Helicobacter pylori 26695]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|91976615|ref|YP_569274.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB5]
 gi|91683071|gb|ABE39373.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB5]
          Length = 244

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 91  KYPNVNVLVETADMRETNRLYM--ANL 115
           +  NVN + E +D+    R Y   AN+
Sbjct: 200 ERSNVNSIREMSDLVAATRAYEQVANV 226


>gi|307609978|emb|CBW99507.1| flagellar biosynthesis protein FlgF [Legionella pneumophila 130b]
          Length = 248

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NVN + +   M    R + A ++ +    D       LL+
Sbjct: 200 QSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNGQKLAQLLQ 247


>gi|251779966|ref|ZP_04822886.1| flagellar hook-basal body complex protein [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243084281|gb|EES50171.1| flagellar hook-basal body complex protein [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 257

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 5/57 (8%)

Query: 77  FDPGHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +   +P+ NA      G+++  NVN   E   + E  R +  N + +    + +   
Sbjct: 193 YSANNPIYNAVVNVRQGVLETSNVNPTEELVKLMEIKRQFETNQKFVSMQDETVQKA 249


>gi|157961168|ref|YP_001501202.1| flagellar basal body rod protein FlgB [Shewanella pealeana ATCC
          700345]
 gi|157846168|gb|ABV86667.1| flagellar basal-body rod protein FlgB [Shewanella pealeana ATCC
          700345]
          Length = 132

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          S R +I+S NIANA T G       Y+ + + F + M+ +   + 
Sbjct: 20 SQRAEILSSNIANADTPG-------YKARDVDFSKAMNAAQSQQT 57


>gi|91792661|ref|YP_562312.1| flagellar basal body rod protein FlgB [Shewanella denitrificans
          OS217]
 gi|91714663|gb|ABE54589.1| flagellar basal-body rod protein FlgB [Shewanella denitrificans
          OS217]
          Length = 132

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 7/40 (17%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          S R +++S NIANA T         Y+ + + F   M  +
Sbjct: 20 SQRAEVLSSNIANANTPH-------YKAQDVDFASAMQSA 52


>gi|317014278|gb|ADU81714.1| flagellar hook protein FlgE [Helicobacter pylori Gambia94/24]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|225850274|ref|YP_002730508.1| flagellar basal-body rod protein FlgB [Persephonella marina EX-H1]
 gi|225646074|gb|ACO04260.1| flagellar basal-body rod protein FlgB [Persephonella marina EX-H1]
          Length = 125

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 29/115 (25%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R ++I  NIANA T         Y+ K + FE+V+        ++I + ++      DP 
Sbjct: 21  RTKVIQSNIANADT-------PFYKPKDLVFEKVL-------TEQIKLKKTDPKHI-DPF 65

Query: 81  HPVANAS----------GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            P   +S          G      VNV  E A + E++ +Y   L+++K   +M 
Sbjct: 66  -PEERSSIKLVEQGKLTGY-DQNQVNVEEELAKLAESSIMYKTLLESMK--KEMA 116


>gi|121607560|ref|YP_995367.1| flagellar basal-body rod protein FlgF [Verminephrobacter eiseniae
           EF01-2]
 gi|121552200|gb|ABM56349.1| flagellar basal-body rod protein FlgF [Verminephrobacter eiseniae
           EF01-2]
          Length = 246

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 78  DPGHPVANA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +P    A+A   +G ++  NVN +     M    R +   +Q ++ +     +   LL
Sbjct: 185 EPLPSDADARMLAGALEGSNVNPVECMVGMIAAARQFEQQMQLLQTAQTNDKSASRLL 242


>gi|91776310|ref|YP_546066.1| flagellar basal-body rod FlgF [Methylobacillus flagellatus KT]
 gi|91710297|gb|ABE50225.1| Flagellar basal-body rod FlgF [Methylobacillus flagellatus KT]
          Length = 246

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           SG ++  NVNV+ E  +M    R +    + I+ + +  T    +
Sbjct: 198 SGALEGSNVNVVEEMVNMISQARQFDLQTKLIQNAENNATKAGQI 242


>gi|90422997|ref|YP_531367.1| flagellar hook-associated protein [Rhodopseudomonas palustris
           BisB18]
 gi|90105011|gb|ABD87048.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
           BisB18]
          Length = 626

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E A +      Y AN + +   + M  T + 
Sbjct: 587 SGVNMDEEMAHLLSLQNAYSANARVMSTVNQMYQTLMQ 624



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  +  IA +GL    A M ++S N+ANA T G       Y RK++       GS G  V
Sbjct: 3  LGDALSIAMAGLRANQAAMTLVSSNVANAETPG-------YIRKSVDQVTTNTGSMGSGV 55


>gi|317180632|dbj|BAJ58418.1| flagellar hook protein FlgE [Helicobacter pylori F32]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|261837904|gb|ACX97670.1| flagellar hook protein [Helicobacter pylori 51]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|224372658|ref|YP_002607030.1| flagellar basal-body rod protein [Nautilia profundicola AmH]
 gi|223589304|gb|ACM93040.1| flagellar basal-body rod protein [Nautilia profundicola AmH]
          Length = 261

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 11 ANSGLAVQSARMQIISENIANARTTG 36
          A   +  Q  R+ +IS N+AN  T G
Sbjct: 8  ATGAMVTQFNRLNVISNNLANVNTAG 33



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 87  SGIVKYPNVNVLVETADMRETNR 109
            G ++  NVN + E  D+ ETNR
Sbjct: 210 QGFLEKSNVNPIREMTDLIETNR 232


>gi|37525838|ref|NP_929182.1| flagellar basal body rod protein FlgB [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|36785267|emb|CAE14208.1| Flagellar basal-body rod protein FlgB (Putative proximal rod
           protein) [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 137

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 31/142 (21%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
           D L A+ H     L+++S R +I+S NIANA T G       Y+ + I F   +  +   
Sbjct: 3   DKLDAAFHFQQEALSLRSRRQEILSANIANADTPG-------YQARDIDFATQLKKTIAH 55

Query: 59  GGVRVKKIGVD---------QSTFVEEFD-----PGHPVANASGIVKYPNVNVLVETADM 104
           G V    IG+          Q     E D     P  P  + +       V++ +E ++ 
Sbjct: 56  GRVTGNGIGLTLTSDRHIPIQPQKRMEMDLLYRVPYQPAMDGN------TVDMDMERSNF 109

Query: 105 RETNRLYMANLQTI-KQSHDMM 125
            + +  Y A L     Q   MM
Sbjct: 110 MDNSLKYQAELTATSSQVKSMM 131


>gi|15611871|ref|NP_223522.1| flagellar hook protein FlgE [Helicobacter pylori J99]
 gi|11386868|sp|Q9ZKY0|FLGE_HELPJ RecName: Full=Flagellar hook protein flgE
 gi|4155354|gb|AAD06366.1| FLAGELLAR HOOK PROTEIN [Helicobacter pylori J99]
 gi|307637557|gb|ADN80007.1| Flagellar hook protein [Helicobacter pylori 908]
 gi|325996148|gb|ADZ51553.1| Flagellar hook protein [Helicobacter pylori 2018]
 gi|325997744|gb|ADZ49952.1| Flagellar hook protein [Helicobacter pylori 2017]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|163793271|ref|ZP_02187246.1| flagellar basal body FlaE domain protein [alpha proteobacterium
          BAL199]
 gi|159181073|gb|EDP65588.1| flagellar basal body FlaE domain protein [alpha proteobacterium
          BAL199]
          Length = 433

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 20/72 (27%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          S LA QS    IIS+NIAN  T G       Y+  T  F+ +             V +S+
Sbjct: 12 SALAAQSQAFGIISDNIANVNTIG-------YKDTTARFQTL-------------VTESS 51

Query: 73 FVEEFDPGHPVA 84
              + PG  +A
Sbjct: 52 SSSRYSPGGVLA 63


>gi|108563278|ref|YP_627594.1| flagellar hook protein FlgE [Helicobacter pylori HPAG1]
 gi|217033066|ref|ZP_03438533.1| hypothetical protein HPB128_148g6 [Helicobacter pylori B128]
 gi|254779163|ref|YP_003057268.1| flagellar hook protein FlgE [Helicobacter pylori B38]
 gi|298736574|ref|YP_003729100.1| flagellar hook protein FlgE [Helicobacter pylori B8]
 gi|107837051|gb|ABF84920.1| flagellar hook protein [Helicobacter pylori HPAG1]
 gi|216945210|gb|EEC23895.1| hypothetical protein HPB128_148g6 [Helicobacter pylori B128]
 gi|254001074|emb|CAX29021.1| Flagellar hook protein FlgE [Helicobacter pylori B38]
 gi|298355764|emb|CBI66636.1| flagellar hook protein FlgE [Helicobacter pylori B8]
 gi|317009123|gb|ADU79703.1| flagellar hook protein FlgE [Helicobacter pylori India7]
 gi|317012675|gb|ADU83283.1| flagellar hook protein FlgE [Helicobacter pylori Lithuania75]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|83647176|ref|YP_435611.1| flagellar basal body rod protein FlgB [Hahella chejuensis KCTC
          2396]
 gi|83635219|gb|ABC31186.1| Flagellar basal body protein [Hahella chejuensis KCTC 2396]
          Length = 131

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 7/57 (12%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           +  I    L V++ R ++++ NIANA T G       +R + I F+ V+  +  + 
Sbjct: 7  KALGIHEQALNVRTRRAEVLANNIANADTPG-------FRARDIDFKAVLRQAKSIE 56


>gi|308063336|gb|ADO05223.1| flagellar hook protein FlgE [Helicobacter pylori Sat464]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|221635450|ref|YP_002523326.1| flagellar basal-body rod protein FlgF (Putative proximal rod
           protein) [Thermomicrobium roseum DSM 5159]
 gi|221157298|gb|ACM06416.1| flagellar basal-body rod protein FlgF (Putative proximal rod
           protein) [Thermomicrobium roseum DSM 5159]
          Length = 248

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           + G ++  NV++     DM    R Y    ++++ + + +   ++
Sbjct: 196 SQGFLEASNVDLTQTLTDMLAATRSYQLAARSLQLADETLRLAVN 240


>gi|194015655|ref|ZP_03054271.1| flagellar hook-associated protein FlgK [Bacillus pumilus ATCC
          7061]
 gi|194013059|gb|EDW22625.1| flagellar hook-associated protein FlgK [Bacillus pumilus ATCC
          7061]
          Length = 506

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M         A  G+  Q A + + S N++NA T G       Y R+ ++F+ 
Sbjct: 1  MGSTFMGLETAKRGITAQRAGLYVTSNNVSNANTDG-------YSRQRVTFKA 46


>gi|152975155|ref|YP_001374672.1| flagellar basal body rod protein FlgB [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023907|gb|ABS21677.1| flagellar basal-body rod protein FlgB [Bacillus cytotoxicus NVH
           391-98]
          Length = 135

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 31/125 (24%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG-- 80
             IS NI+NA T G       Y+ + ++F E M  S  +  KK   D  T    +     
Sbjct: 20  NTISNNISNANTPG-------YKAQDVTFSEQMQMSNELY-KKNASDLKTNSSLYQTNKL 71

Query: 81  H-PVA----------------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           H P A                N  G     +V+V  E  D+ +TN+LY  ++  I   + 
Sbjct: 72  HLPTANVKNTYAKIQEKSMQVNKDGN----SVDVTTEMLDLLKTNQLYGISINAINTQYT 127

Query: 124 MMTTT 128
           +    
Sbjct: 128 INQAA 132


>gi|148259129|ref|YP_001233256.1| flagellar hook-associated protein FlgK [Acidiphilium cryptum
          JF-5]
 gi|146400810|gb|ABQ29337.1| flagellar hook-associated protein FlgK [Acidiphilium cryptum
          JF-5]
          Length = 485

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 22/33 (66%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDT 38
              IA+SGL+    ++ ++S+NIANA T+G +
Sbjct: 5  TGLAIASSGLSAIDQQLAVVSQNIANANTSGYS 37


>gi|308183024|ref|YP_003927151.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4]
 gi|308065209|gb|ADO07101.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|308064341|gb|ADO06228.1| flagellar basal body rod protein FlgB [Helicobacter pylori Sat464]
          Length = 140

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLGYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAK--- 49

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---------------------VANASGIVKYPNVNVLV 99
            +  +I  +QS+ V      +P                     +A   G     +V++ +
Sbjct: 50  -KKAEIFENQSSKVLPLAHTNPRHLDFENSAKDGVSLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKN 139


>gi|308184654|ref|YP_003928787.1| flagellar hook protein FlgE [Helicobacter pylori SJM180]
 gi|308060574|gb|ADO02470.1| flagellar hook protein FlgE [Helicobacter pylori SJM180]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|297380070|gb|ADI34957.1| flagellar hook protein FlgE [Helicobacter pylori v225d]
 gi|315586465|gb|ADU40846.1| flagellar hook protein FlgE [Helicobacter pylori 35A]
 gi|317182178|dbj|BAJ59962.1| flagellar hook protein FlgE [Helicobacter pylori F57]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|217034494|ref|ZP_03439905.1| hypothetical protein HP9810_873g10 [Helicobacter pylori 98-10]
 gi|216943035|gb|EEC22514.1| hypothetical protein HP9810_873g10 [Helicobacter pylori 98-10]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|210135063|ref|YP_002301502.1| flagellar hook protein FlgE [Helicobacter pylori P12]
 gi|210133031|gb|ACJ08022.1| flagellar hook protein [Helicobacter pylori P12]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|188590007|ref|YP_001920227.1| flagellar basal body rod protein FlgG [Clostridium botulinum E3
           str. Alaska E43]
 gi|188500288|gb|ACD53424.1| flagellar hook-basal body complex protein [Clostridium botulinum E3
           str. Alaska E43]
          Length = 257

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 5/57 (8%)

Query: 77  FDPGHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +   +P+ NA      G+++  NVN   E   + E  R +  N + +    + +   
Sbjct: 193 YSANNPIYNAVVNVRQGVLETSNVNPTEELVKLMEIKRQFETNQKFVSMQDETVQKA 249


>gi|149908758|ref|ZP_01897419.1| Hypothetical FlgF flagellar basal-body rod protein [Moritella sp.
           PE36]
 gi|149808300|gb|EDM68239.1| Hypothetical FlgF flagellar basal-body rod protein [Moritella sp.
           PE36]
          Length = 240

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           SG ++  NVN + E       NR +   ++ +K +  +   
Sbjct: 193 SGFLEGSNVNAVTELVSSMMVNRQFELQIKMMKTADTLAQK 233


>gi|104782841|ref|YP_609339.1| flagellar basal body rod protein FlgF [Pseudomonas entomophila L48]
 gi|95111828|emb|CAK16552.1| flagellar basal-body rod protein FlgF [Pseudomonas entomophila L48]
          Length = 246

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
           SG ++  NVN + E   +   +R +  +++ +K +      M   L + 
Sbjct: 198 SGFLEGSNVNAVEEMTSVLALSRQFELHVKMMKAAEEGDQAMARVLQIG 246


>gi|332673326|gb|AEE70143.1| flagellar hook protein FlgE [Helicobacter pylori 83]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|317177302|dbj|BAJ55091.1| flagellar hook protein FlgE [Helicobacter pylori F16]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|317011083|gb|ADU84830.1| flagellar hook protein FlgE [Helicobacter pylori SouthAfrica7]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|295700205|ref|YP_003608098.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
 gi|295439418|gb|ADG18587.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
          Length = 383

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 18/81 (22%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----------GVR 62
          SGL   S  + +I  NIANA T G   G       T  F ++   +           GV 
Sbjct: 8  SGLHAASNDLDVIGNNIANAHTVGFKQG-------TAVFSDMYANAMLGATNNQIGIGVA 60

Query: 63 VKKIGVDQSTFVEEFDPGHPV 83
             I  D S        G+P+
Sbjct: 61 TSAIVRDFSEGTPT-QTGNPL 80


>gi|261839317|gb|ACX99082.1| flagellar hook protein FlgE [Helicobacter pylori 52]
 gi|317178772|dbj|BAJ56560.1| flagellar hook protein FlgE [Helicobacter pylori F30]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|208434779|ref|YP_002266445.1| flagellar hook protein [Helicobacter pylori G27]
 gi|208432708|gb|ACI27579.1| flagellar hook protein [Helicobacter pylori G27]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|188527285|ref|YP_001909972.1| flagellar hook protein FlgE [Helicobacter pylori Shi470]
 gi|188143525|gb|ACD47942.1| flagellar hook protein FlgE [Helicobacter pylori Shi470]
 gi|308062194|gb|ADO04082.1| flagellar hook protein FlgE [Helicobacter pylori Cuz20]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|182412215|ref|YP_001817281.1| flagellar hook-associated protein FlgK [Opitutus terrae PB90-1]
 gi|177839429|gb|ACB73681.1| flagellar hook-associated protein FlgK [Opitutus terrae PB90-1]
          Length = 484

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 7/50 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          M  L AS +     L+  S  ++   +N+AN            Y R+ + 
Sbjct: 1  MSGLFASLNSTVGALSAHSRSIETAGKNLANVNNAS-------YARQRVV 43


>gi|600725|gb|AAA92803.1| flagellar hook FlgE [Helicobacter pylori]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|308050023|ref|YP_003913589.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM
           9799]
 gi|307632213|gb|ADN76515.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM
           9799]
          Length = 242

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 23/49 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ASG ++  NV  + E       +R +   ++ +K +  +  +   LLRD
Sbjct: 193 ASGFLEGSNVTAVEELLASMSLSRQFELQVKLMKSAETLAQSGNRLLRD 241


>gi|242308880|ref|ZP_04808035.1| flagellar hook-protein FlgK [Helicobacter pullorum MIT 98-5489]
 gi|239524544|gb|EEQ64410.1| flagellar hook-protein FlgK [Helicobacter pullorum MIT 98-5489]
          Length = 609

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 7/49 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
          M  L++S +   +GL      +  +S NIANA        ++ Y R+ +
Sbjct: 1  MGGLLSSLNTPYTGLTGHQVMVDTVSNNIANAN-------NEFYTRQVV 42


>gi|157693942|ref|YP_001488404.1| flagellar hook-associated protein FlgK [Bacillus pumilus
          SAFR-032]
 gi|157682700|gb|ABV63844.1| flagellar hook-associated protein 1 [Bacillus pumilus SAFR-032]
          Length = 506

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M         A  G+  Q A + + S N++NA T G       Y R+ ++F+ 
Sbjct: 1  MGSTFMGLETAKRGITAQRAGLYVTSNNVSNANTDG-------YSRQRVTFKA 46


>gi|188582487|ref|YP_001925932.1| flagellar basal body rod protein FlgF [Methylobacterium populi
          BJ001]
 gi|179345985|gb|ACB81397.1| flagellar basal body rod protein [Methylobacterium populi BJ001]
          Length = 246

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 10/95 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +  +  S  A  +  + +I+ N+AN  TTG       ++ ++  F+E +        
Sbjct: 1  MQNALFVGVSAQAALARELDVIANNMANVSTTG-------FKARSARFQEYLMPVASA-- 51

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
                        D G P+    G V+ P+ N +
Sbjct: 52 DSFQRSDRRLSYVIDQGTPLDLTQGPVE-PDGNPM 85


>gi|326402283|ref|YP_004282364.1| flagellar hook-associated protein [Acidiphilium multivorum
          AIU301]
 gi|325049144|dbj|BAJ79482.1| flagellar hook-associated protein [Acidiphilium multivorum
          AIU301]
          Length = 485

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 22/33 (66%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDT 38
              IA+SGL+    ++ ++S+NIANA T+G +
Sbjct: 5  TGLAIASSGLSAIDQQLAVVSQNIANANTSGYS 37


>gi|319944138|ref|ZP_08018416.1| flagellar basal-body rod protein FlgB [Lautropia mirabilis ATCC
          51599]
 gi|319742632|gb|EFV95041.1| flagellar basal-body rod protein FlgB [Lautropia mirabilis ATCC
          51599]
          Length = 154

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +       L ++++R + I+ NIANA T         ++ K   F   +  + G+  
Sbjct: 7  MTDALDFHGRALQLRASRQETIASNIANADTPN-------FKAKDFDFGAALREASGMPA 59

Query: 64 KKIGVDQS 71
             G   +
Sbjct: 60 SDAGSSAA 67


>gi|268680165|ref|YP_003304596.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM
          6946]
 gi|268618196|gb|ACZ12561.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM
          6946]
          Length = 267

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 8/42 (19%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
           +    +  Q  R+ +IS N+AN  TT        ++R  + 
Sbjct: 7  DVTG-AMVTQFNRLNVISNNLANLNTTA-------FKRDDVV 40



 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           A G ++  N+N + E   + ETNRL     + +K 
Sbjct: 215 AQGFLETSNINPVSEMVGLIETNRLVEMYQKVMKS 249


>gi|237753142|ref|ZP_04583622.1| flagellar hook protein FlgE [Helicobacter winghamensis ATCC
          BAA-430]
 gi|229375409|gb|EEO25500.1| flagellar hook protein FlgE [Helicobacter winghamensis ATCC
          BAA-430]
          Length = 758

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          SG+      + + S NIAN  TTG
Sbjct: 10 SGMQAHQIALDVESNNIANVNTTG 33


>gi|34497160|ref|NP_901375.1| flagellar basal-body rod protein FlgF [Chromobacterium violaceum
           ATCC 12472]
 gi|34103017|gb|AAQ59380.1| flagellar basal-body rod protein FlgF [Chromobacterium violaceum
           ATCC 12472]
          Length = 243

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV+ + E       NR +   ++    + DM      L+R
Sbjct: 195 QSGHLERSNVSAVEEMVSTMTLNRNFEMQMKLFNAASDMNEAGNRLVR 242


>gi|23015787|ref|ZP_00055554.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 246

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 20/117 (17%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFE--EVMHGSGGVRVKKIGVDQSTFVEEF 77
            R+++ S        T  T      R K + FE  +++  +G           S F    
Sbjct: 140 TRVEVAS------DGTVSTENGRVARMKVVKFENDQLLRKAG----------DSLFETTQ 183

Query: 78  DPGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           DP    +   A G+++  NV  ++E   M +  R Y    + +   H+     +  L
Sbjct: 184 DPEAVQSPNVAQGMMEESNVQPVLEMTRMTQILREYQGVQKMLDAEHERQLKAIQTL 240


>gi|288554367|ref|YP_003426302.1| flagellar hook-basal body protein [Bacillus pseudofirmus OF4]
 gi|288545527|gb|ADC49410.1| flagellar hook-basal body protein [Bacillus pseudofirmus OF4]
          Length = 281

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  NVN+  E  ++ +T R Y  N + +  + +M
Sbjct: 239 EQSNVNIAQEMNELLQTQRHYQFNARALSMADEM 272



 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 8/47 (17%)

Query: 10 IANSGLAVQSAR-MQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          I+ S    Q  R M  +S N+AN+ TTG       ++R+  +F +++
Sbjct: 6  ISASVTMGQLQRKMDTLSHNMANSNTTG-------FKRREATFSDLL 45


>gi|288553068|ref|YP_003425003.1| flagellar basal body rod protein FlgB [Bacillus pseudofirmus OF4]
 gi|288544228|gb|ADC48111.1| flagellar basal body rod protein FlgB [Bacillus pseudofirmus OF4]
          Length = 131

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 19/107 (17%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV---- 61
           ++  +   GL     R + IS+NIANA       G+  Y+ K +SF+  ++ + G     
Sbjct: 7   STFRVLERGLDGSQLRQRAISDNIANA-------GTPNYQAKKVSFKHTLNEAMGTNLEA 59

Query: 62  -RVKKIGVD---QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
            +     +D    +T  + +   H   N +G     NV++  E +++
Sbjct: 60  NKTNAKHIDFSTTNTGTKVYTNPHTTYNHNGN----NVDIDHEMSEL 102


>gi|260431749|ref|ZP_05785720.1| flagellar basal-body rod protein FlgF [Silicibacter
          lacuscaerulensis ITI-1157]
 gi|260415577|gb|EEX08836.1| flagellar basal-body rod protein FlgF [Silicibacter
          lacuscaerulensis ITI-1157]
          Length = 236

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 7/39 (17%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M++++ NIANA TTG       YR++ + F E +    G
Sbjct: 18 MRLVANNIANANTTG-------YRQQGLVFSEFVRDLPG 49


>gi|271500067|ref|YP_003333092.1| flagellar basal-body rod protein FlgF [Dickeya dadantii Ech586]
 gi|270343622|gb|ACZ76387.1| flagellar basal-body rod protein FlgF [Dickeya dadantii Ech586]
          Length = 251

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +    +M   +R +   ++ I    D       +L
Sbjct: 204 GVLEGSNVNTVESMVEMISNSRRFEMQMKVISSVDDNTQRANQIL 248


>gi|71278001|ref|YP_268219.1| flagellar basal-body rod protein FlgB [Colwellia psychrerythraea
          34H]
 gi|71143741|gb|AAZ24214.1| flagellar basal-body rod protein FlgB [Colwellia psychrerythraea
          34H]
          Length = 132

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 7/46 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          G+ ++S R ++I+ NIANA T G       Y+ K + F + +  + 
Sbjct: 15 GMLIRSQRAEVIASNIANADTPG-------YKAKGLDFNQALAQAA 53


>gi|291613035|ref|YP_003523192.1| flagellar basal-body rod protein FlgB [Sideroxydans lithotrophicus
           ES-1]
 gi|291583147|gb|ADE10805.1| flagellar basal-body rod protein FlgB [Sideroxydans lithotrophicus
           ES-1]
          Length = 134

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 28/133 (21%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKKIGVD 69
           + L +++AR ++I+ NIANA T         Y+ K I F   + G+    G +++     
Sbjct: 14  TALNLRAARQELIASNIANADTPN-------YKAKDIDFASALQGALSGSGEKLQVAVTS 66

Query: 70  Q------------STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                           V    P  P A+ +       V++ VE A   +    Y A+++ 
Sbjct: 67  PLHLAGTTGESVMGAPVLYRKPLQPSADGN------TVDMDVERAQFADNALRYEASVKF 120

Query: 118 IKQSHDMMTTTLD 130
           I      + + L 
Sbjct: 121 ISDDVKDVLSALQ 133


>gi|147678447|ref|YP_001212662.1| flagellar hook-associated protein FlgK [Pelotomaculum
          thermopropionicum SI]
 gi|146274544|dbj|BAF60293.1| flagellar hook-associated protein [Pelotomaculum
          thermopropionicum SI]
          Length = 471

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 13/74 (17%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANART---TGDTP---GSDPY----RRKTISFEEV 54
            S  I+  GLA     M++   N+ANA T   T   P    SDPY    R K +     
Sbjct: 6  FFSLEISRRGLAAGQTGMEVSGHNVANANTPGFTRQRPVLAASDPYTMPSRGKPV---AA 62

Query: 55 MHGSGGVRVKKIGV 68
          +    GV V+ I  
Sbjct: 63 LQVGTGVTVEHIER 76


>gi|144900453|emb|CAM77317.1| Flagellar hook protein FlgE [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 693

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E   M  T R Y A  + I  + +M+   + + R
Sbjct: 651 EASTVDIGEEFTTMIVTQRAYSAAAKIITTADEMLDELVRIKR 693



 Score = 37.6 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 7/66 (10%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          SGLA QS+ M  IS+NI+N  T G       Y+   ++F+ ++     +     G  QS 
Sbjct: 12 SGLASQSSAMGAISDNISNVNTVG-------YKGARVNFQTLVTKQTSITAYSPGGVQSK 64

Query: 73 FVEEFD 78
            +  D
Sbjct: 65 PRQGVD 70


>gi|109947758|ref|YP_664986.1| flagellar hook protein FlgE [Helicobacter acinonychis str. Sheeba]
 gi|109714979|emb|CAJ99987.1| flagellar hook protein [Helicobacter acinonychis str. Sheeba]
          Length = 718

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 678 SNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 716



 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|94312666|ref|YP_585875.1| flagellar basal body rod protein FlgB [Cupriavidus metallidurans
          CH34]
 gi|93356518|gb|ABF10606.1| flagellar basal body rod protein FlgB [Cupriavidus metallidurans
          CH34]
 gi|222834412|gb|EEE72889.1| predicted protein [Populus trichocarpa]
          Length = 134

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          MD L A+       L++++ R  +I+ NIA+A T G       Y+ +   F   +  S
Sbjct: 1  MDKLDAAFRFQQDALSLRTQRQSVIASNIAHADTPG-------YKARDFDFASTLAQS 51


>gi|306821564|ref|ZP_07455162.1| flagellar hook-associated protein FlgK [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550309|gb|EFM38302.1| flagellar hook-associated protein FlgK [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 536

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 15/98 (15%)

Query: 5   IASAHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
            +  + A SGL A Q   +  I  NIAN  T    PG    R    +       +G    
Sbjct: 19  FSGLNAATSGLFAAQRV-LDTIGHNIANQNT----PGYTRQRANQSAASATSIENGNYLG 73

Query: 60  -GVRVKKIGVDQSTFV-EEFDPGHPVANASGIVKYPNV 95
            GV++  I   +   +  ++   +      G     NV
Sbjct: 74  MGVKMSSISQIRDELLDIKYRNENT---KKGYWSQSNV 108


>gi|163856432|ref|YP_001630730.1| flagellar basal body rod protein FlgB [Bordetella petrii DSM 12804]
 gi|163260160|emb|CAP42462.1| flagellar basal-body rod protein FlgB [Bordetella petrii]
          Length = 135

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 42/134 (31%), Gaps = 38/134 (28%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV---------- 63
            L  +    +++S NIANA T         Y+ +   F+  M  +   R+          
Sbjct: 17  ALRAERQ--EVLSSNIANADTPN-------YKARDFDFQAAMRNALDTRMRLPDTQLALT 67

Query: 64  -------KKIGVDQSTF--VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                  K +  D +       + P          +    V++  E     +    Y ++
Sbjct: 68  SARHIPAKAVTPDPAELLYRLPYQPS---------IDGNTVDMDAERVQFADNTLHYQSS 118

Query: 115 LQTIKQ-SHDMMTT 127
           LQ +      MM+ 
Sbjct: 119 LQMLSSRIRSMMSA 132


>gi|222834410|gb|EEE72887.1| predicted protein [Populus trichocarpa]
          Length = 170

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 7/37 (18%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M +IS N+AN  TTG       ++R    FEE+M+ +
Sbjct: 1  MDVISNNLANVSTTG-------FKRSRAVFEEMMYQT 30


>gi|32490790|ref|NP_871044.1| hypothetical protein WGLp041 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165996|dbj|BAC24187.1| flgE [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 410

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV++  E   M      Y +N QTIK    ++   +++
Sbjct: 371 SNVDISNELVKMMTQQSNYQSNAQTIKTQDQLLQILVNM 409


>gi|317011118|gb|ADU84865.1| flagellar hook protein FlgE [Helicobacter pylori SouthAfrica7]
          Length = 605

 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNAKAFGAGDDMIKEAISL 603


>gi|167034937|ref|YP_001670168.1| flagellar hook-associated protein FlgK [Pseudomonas putida GB-1]
 gi|166861425|gb|ABY99832.1| flagellar hook-associated protein FlgK [Pseudomonas putida GB-1]
          Length = 680

 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +   I  SGL+   A + + S NIANA T+G       Y R+          + G   
Sbjct: 1  MSSLISIGLSGLSASQAALSVTSNNIANAATSG-------YSRQQTIQAAGASHNIGAGF 53

Query: 64 KKIGVDQSTFVEEF 77
             G   +     +
Sbjct: 54 LGTGTTLADVRRIY 67


>gi|50403744|sp|P50611|FLGE_HELMU RecName: Full=Flagellar hook protein flgE
          Length = 454

 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          SG+      + + S NIAN  TTG
Sbjct: 10 SGMQAHQVALDVESNNIANVNTTG 33


>gi|7514872|pir||S61455 flagellar hook protein flgE - Helicobacter mustelae  (fragment)
          Length = 454

 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          SG+      + + S NIAN  TTG
Sbjct: 10 SGMQAHQVALDVESNNIANVNTTG 33


>gi|90423517|ref|YP_531887.1| hypothetical protein RPC_2013 [Rhodopseudomonas palustris BisB18]
 gi|90105531|gb|ABD87568.1| protein of unknown function DUF1078-like [Rhodopseudomonas
           palustris BisB18]
          Length = 464

 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 25/46 (54%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  N +V  + + +  T + Y AN++ +  ++ MM   L+ +R
Sbjct: 419 GNIEGSNSDVAGQFSKLVATQQAYSANVKVMTTANQMMADLLNAVR 464



 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + A+ + A SG+A QS  +  IS NIANA T G       ++R   SF +++   G
Sbjct: 3  ITAAINTAISGMAAQSYAIGNISGNIANAHTPG-------FKRIDTSFADLVSNQG 51


>gi|114562348|ref|YP_749861.1| flagellar hook-associated protein FlgK [Shewanella frigidimarina
          NCIMB 400]
 gi|114333641|gb|ABI71023.1| flagellar hook-associated protein FlgK [Shewanella frigidimarina
          NCIMB 400]
          Length = 642

 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    A++ + S NIANA T G       Y R+  +   +     G      G
Sbjct: 6  LNIARTGVQASQAQLGVTSNNIANANTEG-------YNRQVATQSSLESQRLGNSFYGTG 58

Query: 68 VDQSTFVEEFD 78
             S     ++
Sbjct: 59 TYVSDVKRVYN 69


>gi|15895409|ref|NP_348758.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum
           ATCC 824]
 gi|15025132|gb|AAK80098.1|AE007715_3 Flagellar basal body rod protein [Clostridium acetobutylicum ATCC
           824]
          Length = 258

 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 22/40 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NVNV+    DM  T R++ +N +T++   + +   ++
Sbjct: 214 EGSNVNVMKGMTDMMTTMRVFESNQKTVQSIDETVGKAVN 253


>gi|326319094|ref|YP_004236766.1| flagellar basal-body rod protein FlgB [Acidovorax avenae subsp.
          avenae ATCC 19860]
 gi|323375930|gb|ADX48199.1| flagellar basal-body rod protein FlgB [Acidovorax avenae subsp.
          avenae ATCC 19860]
          Length = 147

 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 9/46 (19%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L  +  R   I+ NIANA T G       Y  +  +F + +  + G
Sbjct: 18 LRAERQR--AIASNIANADTPG-------YVARDFNFADALRDATG 54


>gi|109947808|ref|YP_665036.1| flagellar hook protein FlgE [Helicobacter acinonychis str. Sheeba]
 gi|109715029|emb|CAK00037.1| flagellar hook protein [Helicobacter acinonychis str. Sheeba]
          Length = 605

 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNAKAFGAGDDMIKEAISL 603


>gi|302878273|ref|YP_003846837.1| flagellar basal-body rod protein FlgB [Gallionella
           capsiferriformans ES-2]
 gi|302581062|gb|ADL55073.1| flagellar basal-body rod protein FlgB [Gallionella
           capsiferriformans ES-2]
          Length = 134

 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 29/141 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVR 62
           L  S H   + L+++ AR ++++ NIANA T G       Y+ + I+F   +  +  G  
Sbjct: 5   LDESLHFNQTALSLRGARQELLASNIANADTPG-------YKARDINFASALQNALAGTS 57

Query: 63  VKKIGVDQSTFVEEFD--------------PGHPVANASGIVKYPNVNVLVETADMRETN 108
           VK      S    E +              P  P A+ +       VN+ VE A   +  
Sbjct: 58  VKLPMATSSAMHLEGNAGGQIMGAPVQYRRPDQPSADGN------TVNMDVERAQFADNA 111

Query: 109 RLYMANLQ-TIKQSHDMMTTT 128
             Y A+++ T  +  DM+   
Sbjct: 112 LRYEASVKFTGDKLKDMLAAL 132


>gi|167948873|ref|ZP_02535947.1| Flagellar basal-body rod protein FlgB [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 127

 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 24/110 (21%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV-------KKIGVDQ--- 70
           R ++I+ N+ANA T G       Y+ +   F +V+  + G  V         I  +Q   
Sbjct: 18  RSELIASNLANADTPG-------YKARDFDFHKVLQQAQGEPVRLRTTHPSHIQDEQGVV 70

Query: 71  STFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                 +  P  P  + +       V    E +     +  Y A+L+ + 
Sbjct: 71  PPTQMLYRIPSQPSLDGN------TVETEREQSTFASNSLEYQASLRFLN 114


>gi|114320058|ref|YP_741741.1| flagellar basal-body rod protein FlgF [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226452|gb|ABI56251.1| flagellar basal-body rod protein FlgF [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 246

 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 64  KKIGVDQSTFVEEFDPGHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           + +  D        D G   A+A     SG  +  NVN++     M +  R +   ++ +
Sbjct: 170 QDLRKDNDGLFRLVDGGEAEADAGVRLVSGAYEGSNVNMVDALVKMIDHARQFETYVKMM 229

Query: 119 KQSHDMMTTTLDLLRD 134
             + +   T+  LLR+
Sbjct: 230 TAAEENDQTSAQLLRN 245


>gi|224417868|ref|ZP_03655874.1| flagellar hook-associated protein FlgK [Helicobacter canadensis
          MIT 98-5491]
 gi|253827207|ref|ZP_04870092.1| flagellar hook-associated protein [Helicobacter canadensis MIT
          98-5491]
 gi|313141411|ref|ZP_07803604.1| flagellar hook-protein FlgK [Helicobacter canadensis MIT 98-5491]
 gi|253510613|gb|EES89272.1| flagellar hook-associated protein [Helicobacter canadensis MIT
          98-5491]
 gi|313130442|gb|EFR48059.1| flagellar hook-protein FlgK [Helicobacter canadensis MIT 98-5491]
          Length = 609

 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 7/49 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
          M  L++S +   +GL      +  +S NIANA        ++ Y R+ +
Sbjct: 1  MGGLLSSLNTPYTGLTGHQVMVDTVSNNIANAN-------NEFYSRQVV 42


>gi|223040701|ref|ZP_03610970.1| flagellar basal-body rod protein [Campylobacter rectus RM3267]
 gi|222878065|gb|EEF13177.1| flagellar basal-body rod protein [Campylobacter rectus RM3267]
          Length = 270

 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A   +  Q  R+ +I+ N+AN  T G       ++R  + 
Sbjct: 8  ATGAMVTQFNRLDVIANNLANINTIG-------FKRDDVV 40


>gi|126175149|ref|YP_001051298.1| flagellar basal body rod protein FlgB [Shewanella baltica OS155]
 gi|125998354|gb|ABN62429.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS155]
          Length = 134

 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 9/39 (23%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE 52
          G+  Q A  ++IS NIANA T         Y+ + + F 
Sbjct: 17 GIRAQRA--EVISSNIANADTPH-------YKARDVDFS 46


>gi|153953797|ref|YP_001394562.1| flagellar basal body rod protein FlgG [Clostridium kluyveri DSM
          555]
 gi|219854413|ref|YP_002471535.1| hypothetical protein CKR_1070 [Clostridium kluyveri NBRC 12016]
 gi|146346678|gb|EDK33214.1| FlgG1 [Clostridium kluyveri DSM 555]
 gi|219568137|dbj|BAH06121.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 255

 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I S + A SG+ VQ A+  +I+ N+AN  T G
Sbjct: 1  MIRSFYTAVSGMIVQEAKQDVITNNLANVNTVG 33



 Score = 33.7 bits (77), Expect = 7.8,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 19/40 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  N+N++   +D+  T R +  + + ++     +   ++
Sbjct: 211 EKSNINLVNTMSDLITTMRTFETDQKVVQSIDGTLDKLIN 250


>gi|70729010|ref|YP_258744.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          Pf-5]
 gi|68343309|gb|AAY90915.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          Pf-5]
          Length = 683

 Score = 38.8 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +I  SGLA     +     NIANA T G       Y R+            G    
Sbjct: 1  MSLLNIGMSGLAASQTSLMTTGNNIANADTAG-------YSRQQTVQGTKASSQNGNVFI 53

Query: 65 KIGVDQSTFVEEFD 78
            G   +     ++
Sbjct: 54 GTGTTLADVRRVYN 67


>gi|328543139|ref|YP_004303248.1| hypothetical protein SL003B_1520 [polymorphum gilvum SL003B-26A1]
 gi|326412884|gb|ADZ69947.1| Conserved domain protein [Polymorphum gilvum SL003B-26A1]
          Length = 361

 Score = 38.8 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 21/41 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N ++  E + +  T + Y AN + +  +  M+   L+++R
Sbjct: 321 SNADIAAEFSKLIITQQAYSANSKVVTSADQMLNDALNMVR 361


>gi|307945687|ref|ZP_07661023.1| flagellar hook-associated protein FlgK [Roseibium sp. TrichSKD4]
 gi|307771560|gb|EFO30785.1| flagellar hook-associated protein FlgK [Roseibium sp. TrichSKD4]
          Length = 617

 Score = 38.8 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          L ++ + A  G+     ++ + S+NIAN  T G       Y +K +       G+GGV
Sbjct: 3  LTSALNNALFGVTFNQRQLDVTSQNIANKDTVG-------YTKKQVEANVFYDGNGGV 53



 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 16/35 (45%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           V++  E A +      Y AN + ++  +++    L
Sbjct: 580 VDLDEEMAQLVNLQNAYAANARVMQAVNELFDRLL 614


>gi|299822281|ref|ZP_07054167.1| flagellar hook-associated protein FlgK [Listeria grayi DSM 20601]
 gi|299815810|gb|EFI83048.1| flagellar hook-associated protein FlgK [Listeria grayi DSM 20601]
          Length = 509

 Score = 38.8 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 21/38 (55%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DM  + L+++
Sbjct: 472 VNIDEEMTNIMQYQSYYVANTKAMNIVNDMFQSLLNIM 509



 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 33/85 (38%), Gaps = 17/85 (20%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          ++  +++ SG+        +  +NI+N  T G       Y R+ ++ + +    G     
Sbjct: 3  LSDYNVSLSGMNAAQIATMVAQQNISNINTAG-------YVRQNVNQQALYGDGGLLQGK 55

Query: 60 ----GVRVKKIGVDQS-TFVEEFDP 79
              GV+V  I    S     +++ 
Sbjct: 56 QTGYGVKVTDIARVTSGALNLQYNQ 80


>gi|226327737|ref|ZP_03803255.1| hypothetical protein PROPEN_01610 [Proteus penneri ATCC 35198]
 gi|225203441|gb|EEG85795.1| hypothetical protein PROPEN_01610 [Proteus penneri ATCC 35198]
          Length = 463

 Score = 38.8 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 14/75 (18%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---VMHGSG--- 59
          +  + A SGL    A M  +S NIAN            Y R+   F E    M G+G   
Sbjct: 4  SLINTAMSGLNAAQAAMSTVSNNIANQNV-------KWYNRQMTVFNENSGTMTGNGYIG 56

Query: 60 -GVRVKKIGVDQSTF 73
           GV V +I  + + F
Sbjct: 57 NGVNVSRIHREYNEF 71


>gi|163750573|ref|ZP_02157811.1| flagellar basal-body rod protein FlgB [Shewanella benthica KT99]
 gi|161329728|gb|EDQ00717.1| flagellar basal-body rod protein FlgB [Shewanella benthica KT99]
          Length = 132

 Score = 38.8 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 19/120 (15%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            R ++I+ NIANA T         Y+ + ++F++ +  +   R   + + +S     FD 
Sbjct: 21  KRAEVIASNIANADTPH-------YKARDVNFDKALQAATS-RQGGLAMSRSDSRH-FDL 71

Query: 80  GHPVANASGIVKYPN---------VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                   G  + PN         V++  E ++  +    Y  +L  +      M   L 
Sbjct: 72  TALSQQNYGY-RVPNQPDTGDGNTVDMQKEQSEFMKNALEYQMSLGFLDGKFSGMKKALR 130


>gi|85706168|ref|ZP_01037263.1| flagellar basal-body rod protein FlgF [Roseovarius sp. 217]
 gi|85669332|gb|EAQ24198.1| flagellar basal-body rod protein FlgF [Roseovarius sp. 217]
          Length = 237

 Score = 38.8 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NV+ + + A M E  R Y      +   ++ + T LD
Sbjct: 190 QGFLEGANVDPIGQIARMIEVQRAYEMGQSFLDSENERVMTALD 233


>gi|295696110|ref|YP_003589348.1| flagellar basal-body rod protein FlgB [Bacillus tusciae DSM 2912]
 gi|295411712|gb|ADG06204.1| flagellar basal-body rod protein FlgB [Bacillus tusciae DSM 2912]
          Length = 135

 Score = 38.8 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 16/126 (12%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVKKIGVDQ- 70
            L   + R ++I++N+AN  T G       Y R+ + FE++     +    +     D  
Sbjct: 15  ALDATALRQKLIADNVANVDTPG-------YHRQDVRFEDIFAQALAQPAPLAGFRTDPR 67

Query: 71  -----STFVEEFDPGHPVANASGIVK-YPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                   + +  P   V + +       NV++  E  ++      Y+  LQ +     M
Sbjct: 68  HFIIGPPPLSQVRPETTVDDQTVYSTNGNNVDMDREMTELAANQTEYLTLLQDVNLQFAM 127

Query: 125 MTTTLD 130
           +   L+
Sbjct: 128 LRYALN 133


>gi|317406204|gb|EFV86453.1| flagellar basal-body rod protein [Achromobacter xylosoxidans C54]
          Length = 135

 Score = 38.8 bits (90), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 9/45 (20%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          GL  Q    +++S NIANA T         Y+ +   F+  M  +
Sbjct: 17 GLRAQRQ--EVLSSNIANADTPN-------YKARDFDFKAAMQNA 52


>gi|146341767|ref|YP_001206815.1| flagellar hook protein FlgE [Bradyrhizobium sp. ORS278]
 gi|146194573|emb|CAL78598.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. ORS278]
          Length = 415

 Score = 38.8 bits (90), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 15/70 (21%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------- 55
          L  +   A S L  QS+ + +IS+NI+NA TTG       Y+  +  FE+++        
Sbjct: 3  LSGALSSAISALNAQSSSLAMISDNISNADTTG-------YKTTSGLFEQLVTASSSSKA 55

Query: 56 HGSGGVRVKK 65
          + SGGV V  
Sbjct: 56 YSSGGVSVSG 65


>gi|28211376|ref|NP_782320.1| flagellar hook-associated protein 1 [Clostridium tetani E88]
 gi|28203817|gb|AAO36257.1| flagellar hook-associated protein 1 [Clostridium tetani E88]
          Length = 579

 Score = 38.8 bits (90), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 21/87 (24%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
          M  L  + H+  SG+      + + S N+ANA T G       Y R+    +        
Sbjct: 1  MSGLFGTLHVGKSGIFANQKAIDVTSHNMANANTEG-------YSRQRAELQTERPFCTP 53

Query: 57 ------GSG----GVRVKKIGVDQSTF 73
                G+G    GV V  I   +  F
Sbjct: 54 SMNNAVGAGQLGRGVNVADINRVRDAF 80



 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  ET ++ +    Y AN + I    +++   ++ L+
Sbjct: 538 SGVSIDEETTNLIQFQHAYQANAKIISTVDELLDVVINGLK 578


>gi|307131608|ref|YP_003883624.1| flagellar basal-body rod protein flgF [Dickeya dadantii 3937]
 gi|306529137|gb|ADM99067.1| Flagellar basal-body rod protein flgF [Dickeya dadantii 3937]
          Length = 251

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +    +M   +R +   ++ I    D       +L
Sbjct: 204 GVLEGSNVNTVESMVEMISNSRRFEMQMKVISNVDDNTQRANQIL 248


>gi|255322393|ref|ZP_05363539.1| flagellar basal-body rod protein [Campylobacter showae RM3277]
 gi|255300766|gb|EET80037.1| flagellar basal-body rod protein [Campylobacter showae RM3277]
          Length = 270

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A   +  Q  R+ +I+ N+AN  T G       ++R  + 
Sbjct: 8  ATGAMVTQFNRLDVIANNLANINTIG-------FKRDDVV 40


>gi|153001475|ref|YP_001367156.1| flagellar basal body rod protein FlgB [Shewanella baltica OS185]
 gi|160876206|ref|YP_001555522.1| flagellar basal body rod protein FlgB [Shewanella baltica OS195]
 gi|217972595|ref|YP_002357346.1| flagellar basal body rod protein FlgB [Shewanella baltica OS223]
 gi|304409981|ref|ZP_07391600.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS183]
 gi|307302306|ref|ZP_07582064.1| flagellar basal-body rod protein FlgB [Shewanella baltica BA175]
 gi|151366093|gb|ABS09093.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS185]
 gi|160861728|gb|ABX50262.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS195]
 gi|217497730|gb|ACK45923.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS223]
 gi|304351390|gb|EFM15789.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS183]
 gi|306914344|gb|EFN44765.1| flagellar basal-body rod protein FlgB [Shewanella baltica BA175]
 gi|315268396|gb|ADT95249.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS678]
          Length = 134

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 9/39 (23%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE 52
          G+  Q A  ++IS NIANA T         Y+ + + F 
Sbjct: 17 GIRAQRA--EVISSNIANADTPH-------YKARDVDFS 46


>gi|90418400|ref|ZP_01226312.1| flagellar basal-body rod protein FlgF [Aurantimonas manganoxydans
          SI85-9A1]
 gi|90338072|gb|EAS51723.1| flagellar basal-body rod protein FlgF [Aurantimonas manganoxydans
          SI85-9A1]
          Length = 241

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 10/44 (22%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
           L+ Q   S R+  I+ N+AN+RTTG       +R + I FEE+
Sbjct: 8  ALSAQLAMSKRLDTIAHNVANSRTTG-------FRAEEIKFEEL 44


>gi|317012717|gb|ADU83325.1| flagellar hook protein FlgE [Helicobacter pylori Lithuania75]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|297380105|gb|ADI34992.1| flagellar hook protein FlgE [Helicobacter pylori v225d]
 gi|308062226|gb|ADO04114.1| flagellar hook protein FlgE [Helicobacter pylori Cuz20]
 gi|308063738|gb|ADO05625.1| flagellar hook protein FlgE [Helicobacter pylori Sat464]
 gi|317178740|dbj|BAJ56528.1| flagellar hook protein FlgE [Helicobacter pylori F30]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|293605000|ref|ZP_06687396.1| flagellar basal-body rod protein FlgB [Achromobacter piechaudii
          ATCC 43553]
 gi|292816605|gb|EFF75690.1| flagellar basal-body rod protein FlgB [Achromobacter piechaudii
          ATCC 43553]
          Length = 135

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 9/45 (20%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          GL  Q    +++S NIANA T         Y+ +   F+  M  +
Sbjct: 17 GLRAQRQ--EVLSSNIANADTPN-------YKARDFDFKTAMQNA 52


>gi|217032455|ref|ZP_03437948.1| hypothetical protein HPB128_175g16 [Helicobacter pylori B128]
 gi|298736140|ref|YP_003728665.1| flagellar hook protein FlgE [Helicobacter pylori B8]
 gi|216945863|gb|EEC24483.1| hypothetical protein HPB128_175g16 [Helicobacter pylori B128]
 gi|298355329|emb|CBI66201.1| flagellar hook protein FlgE [Helicobacter pylori B8]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|15645524|ref|NP_207700.1| flagellar hook protein FlgE [Helicobacter pylori 26695]
 gi|2314044|gb|AAD07954.1| flagellar hook (flgE) [Helicobacter pylori 26695]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|222824020|ref|YP_002575594.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100]
 gi|222539242|gb|ACM64343.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100]
          Length = 269

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  A   G  +  NVN + E   + E NR+     + +  
Sbjct: 213 NSNAIRQGFTQGSNVNPVTEMVGLIEANRMVEMYQKVMTS 252



 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A   +  Q  R+ +++ N+AN  T+G       Y+R  + 
Sbjct: 8  ATGAMVTQFNRLDVVTNNLANVNTSG-------YKRDNVV 40


>gi|332673746|gb|AEE70563.1| flagellar hook [Helicobacter pylori 83]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|317182208|dbj|BAJ59992.1| flagellar hook protein FlgE [Helicobacter pylori F57]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|317177697|dbj|BAJ55486.1| flagellar hook protein FlgE [Helicobacter pylori F16]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|308183061|ref|YP_003927188.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4]
 gi|308065246|gb|ADO07138.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|308184693|ref|YP_003928826.1| flagellar hook protein FlgE [Helicobacter pylori SJM180]
 gi|308060613|gb|ADO02509.1| flagellar hook protein FlgE [Helicobacter pylori SJM180]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|315586853|gb|ADU41234.1| flagellar hook protein [Helicobacter pylori 35A]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|261838284|gb|ACX98050.1| flagellar hook protein [Helicobacter pylori 51]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|254779511|ref|YP_003057617.1| flagellar hook protein FlgE [Helicobacter pylori B38]
 gi|254001423|emb|CAX29418.1| Flagellar hook protein FlgE [Helicobacter pylori B38]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|210135099|ref|YP_002301538.1| flagellar hook protein FlgE [Helicobacter pylori P12]
 gi|210133067|gb|ACJ08058.1| flagellar hook protein [Helicobacter pylori P12]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|108563315|ref|YP_627631.1| flagellar hook protein FlgE [Helicobacter pylori HPAG1]
 gi|107837088|gb|ABF84957.1| flagellar hook protein [Helicobacter pylori HPAG1]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|325509555|gb|ADZ21191.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum
           EA 2018]
          Length = 258

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 22/40 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NVNV+    DM  T R++ +N +T++   + +   ++
Sbjct: 214 EGSNVNVMKGMTDMMTTMRVFESNQKTVQSIDETVGKAVN 253


>gi|306518947|ref|ZP_07405294.1| flagellar basal body rod protein FlgG [Clostridium difficile
          QCD-32g58]
          Length = 182

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +    + + + L+   +++ IIS NIAN+ +TG
Sbjct: 1  MYTMFYTSKTALSANQSKLDIISNNIANSDSTG 33


>gi|260222469|emb|CBA32064.1| Flagellar basal-body rod protein flgF [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 246

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +G+++  NVN +     M +T R + A  + ++ +  
Sbjct: 196 QAGMLEGSNVNAIEAMVGMIQTARQFEAQTRLMQTAES 233


>gi|224170008|ref|XP_002339332.1| predicted protein [Populus trichocarpa]
 gi|222874887|gb|EEF12018.1| predicted protein [Populus trichocarpa]
          Length = 251

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 20/51 (39%), Gaps = 3/51 (5%)

Query: 83  VAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            A+     G V+  NV+ + E   + +T R + +  +      +M    + 
Sbjct: 196 DADIRIQQGFVENSNVSSMHEMVQLMQTMRHFESMQKVALGYDEMTGQAIR 246


>gi|217034408|ref|ZP_03439822.1| hypothetical protein HP9810_884g13 [Helicobacter pylori 98-10]
 gi|216943139|gb|EEC22611.1| hypothetical protein HP9810_884g13 [Helicobacter pylori 98-10]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|188527733|ref|YP_001910420.1| flagellar hook protein FlgE [Helicobacter pylori Shi470]
 gi|188143973|gb|ACD48390.1| flagellar hook protein FlgE [Helicobacter pylori Shi470]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|308050375|ref|YP_003913941.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
          9799]
 gi|307632565|gb|ADN76867.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
          9799]
          Length = 131

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 19/80 (23%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV----- 68
          G+  + A  +++S NIANA T         Y+ + + FE+ + G+   +   +       
Sbjct: 17 GVRAERA--EVLSSNIANADTPN-------YKAQDLDFEQALAGAKSRQSFALARSHEKH 67

Query: 69 -----DQSTFVEEFDPGHPV 83
               D    ++   P HP 
Sbjct: 68 FDASIDPQPGLKFRVPLHPD 87


>gi|208434813|ref|YP_002266479.1| flagellar hook protein [Helicobacter pylori G27]
 gi|208432742|gb|ACI27613.1| flagellar hook protein [Helicobacter pylori G27]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|82702450|ref|YP_412016.1| flagellar basal-body rod protein FlgB [Nitrosospira multiformis
           ATCC 25196]
 gi|82410515|gb|ABB74624.1| flagellar basal-body rod protein FlgB [Nitrosospira multiformis
           ATCC 25196]
          Length = 134

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 21/121 (17%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L     ++  I+ NIANA T         Y+ + I+F++ M  +   + + + +  S   
Sbjct: 18  LRAHRQQL--IASNIANADTPQ-------YKARDINFKDAMESALTGK-RGVILVTSAPN 67

Query: 75  EEFDPG--HPVANA--------SGIVKYPNVNVLVETADMRETNRLYMANLQTI-KQSHD 123
               P      A           G V    V++ VE     +    Y ANL  I  Q   
Sbjct: 68  HIASPTGAGVAAGQQLLYRTAVQGSVDGNTVDMDVERNQFADNAVHYEANLTFISDQIRQ 127

Query: 124 M 124
           M
Sbjct: 128 M 128


>gi|317180242|dbj|BAJ58028.1| flagellar hook protein FlgE [Helicobacter pylori F32]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|317009564|gb|ADU80144.1| flagellar hook protein FlgE [Helicobacter pylori India7]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|218887373|ref|YP_002436694.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758327|gb|ACL09226.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 136

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 17/114 (14%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--VRVKKIGVDQST 72
           + +Q  R  ++  NIAN RT G       Y+ + + FE+ +  + G   + +    +Q+ 
Sbjct: 16  MDMQLQRQNVVMSNIANVRTPG-------YKPRELEFEKQLQSALGLDAKGRMTRTEQNH 68

Query: 73  FVEEFDPGHPVANASGIVKYP-------NVNVLVETADMRETNRLYMANLQTIK 119
              EF      A+       P        VN+  E A M + +  Y A    I+
Sbjct: 69  LPSEFSADGFNADWE-KAAKPRVIHGEDRVNLDKEMAKMAKNSLHYSALTTVIR 121


>gi|207092210|ref|ZP_03239997.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_AG0C1]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|120613056|ref|YP_972734.1| flagellar basal-body rod protein FlgB [Acidovorax citrulli
          AAC00-1]
 gi|120591520|gb|ABM34960.1| flagellar basal-body rod protein FlgB [Acidovorax citrulli
          AAC00-1]
          Length = 147

 Score = 38.4 bits (89), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 9/46 (19%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L  +  R   I+ NIANA T G       Y  +  +F + +  + G
Sbjct: 18 LRAERQR--AIASNIANADTPG-------YVARDFNFADALRDATG 54


>gi|299531285|ref|ZP_07044695.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni S44]
 gi|298720692|gb|EFI61639.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni S44]
          Length = 246

 Score = 38.4 bits (89), Expect = 0.32,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG ++  NVN +     M   +R +   ++ ++ +     +   LL
Sbjct: 197 SGSIEGSNVNSVETMVGMIAASRQFEQQMKLLQTAETNDKSASQLL 242


>gi|74317651|ref|YP_315391.1| flagellar basal body rod protein FlgF [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057146|gb|AAZ97586.1| flagellar basal body rod protein FlgF [Thiobacillus denitrificans
           ATCC 25259]
          Length = 246

 Score = 38.4 bits (89), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 23/45 (51%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G ++  NVNV+ E  +M    R +  +++ ++ + +  +    LL
Sbjct: 199 GALESSNVNVVDEMVNMISLARQFDMHMKLLQHAENNDSKAAQLL 243


>gi|83312595|ref|YP_422859.1| flagellar basal body rod protein [Magnetospirillum magneticum
           AMB-1]
 gi|82947436|dbj|BAE52300.1| Flagellar basal body rod protein [Magnetospirillum magneticum
           AMB-1]
          Length = 253

 Score = 38.4 bits (89), Expect = 0.32,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 16/115 (13%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFE--EVMHGSGGVRVKKIGVDQSTFVEEF 77
            R+++ S        T  T      R K + FE  + M  +G      +           
Sbjct: 147 TRVEVAS------DGTVSTENGRVARLKVVKFENDQQMRKAG----DSLYETTQEPEVVQ 196

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            P H    A G+++  NV  ++E   M +  R Y    + +   HD     +  L
Sbjct: 197 SP-HV---AQGMMEESNVQPVLEMTRMTQILREYQGVQKMLDAEHDRQLKAIQAL 247


>gi|327480017|gb|AEA83327.1| flagellar basal body rod protein FlgB [Pseudomonas stutzeri DSM
           4166]
          Length = 134

 Score = 38.4 bits (89), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 27/139 (19%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-----HGSGG 60
            +  I    L  +S R ++++ NIANA T         Y+ + + F  V+        GG
Sbjct: 7   KALGIHEKALGFRSQRAEVLANNIANADTPN-------YKARDLDFSSVLAEQSARSQGG 59

Query: 61  VRVKKIGV--------DQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
             V +           + +     F  P HP  + +       V++ +E ++  +    +
Sbjct: 60  FGVARTSERHIAAEGLEIADASLRFRTPAHPSLDQN------TVDLQIEQSNYAKNAVDF 113

Query: 112 MANLQTIKQSHDMMTTTLD 130
            A+   +      + + L 
Sbjct: 114 QASFTLLNSKFKGLMSALR 132


>gi|23100411|ref|NP_693878.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831]
 gi|22778644|dbj|BAC14912.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831]
          Length = 276

 Score = 38.4 bits (89), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  NV++  E +D+  T RLY  N +TI     MM
Sbjct: 234 EQSNVDISKEMSDLLMTQRLYQFNSRTITMGDQMM 268


>gi|317014317|gb|ADU81753.1| flagellar hook protein FlgE [Helicobacter pylori Gambia94/24]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|264676571|ref|YP_003276477.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni
           CNB-2]
 gi|262207083|gb|ACY31181.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni
           CNB-2]
          Length = 246

 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG ++  NVN +     M   +R +   ++ ++ +     +   LL
Sbjct: 197 SGSIEGSNVNSVETMVGMIAASRQFEQQMKLLQTAETNDKSASQLL 242


>gi|299066532|emb|CBJ37722.1| putative flagellar basal-body rod protein flgB [Ralstonia
          solanacearum CMR15]
          Length = 128

 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           L   S R Q I+ NIAN+ T G  P    +  +    + ++ G  G
Sbjct: 16 ALDAASLRQQAIAANIANSETAGYVPVGVTFDAQMAEMQRLLDGGSG 62


>gi|294679032|ref|YP_003579647.1| flagellar basal-body rod protein FlgF [Rhodobacter capsulatus SB
           1003]
 gi|294477852|gb|ADE87240.1| flagellar basal-body rod protein FlgF [Rhodobacter capsulatus SB
           1003]
          Length = 237

 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 3/34 (8%)

Query: 82  PVANA---SGIVKYPNVNVLVETADMRETNRLYM 112
           P  NA    G V+  NV+ + E A M E  R Y 
Sbjct: 183 PAENARVMQGAVEQSNVDPVREIARMVEVQRAYE 216



 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 7/39 (17%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          MQ+++ N+AN  TTG       +RR+ + F E +    G
Sbjct: 19 MQVVANNMANVNTTG-------FRREGVVFSEYVDSLDG 50


>gi|224373466|ref|YP_002607838.1| flagellar basal body and hook protein [Nautilia profundicola AmH]
 gi|223589855|gb|ACM93591.1| flagellar basal body and hook protein [Nautilia profundicola AmH]
          Length = 642

 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV+      ++  T + Y +  +T+  S  M+   +D+
Sbjct: 599 EASNVDFSQAMTELIVTQKAYSSAAKTVTTSDQMIQRAIDM 639


>gi|269866427|ref|XP_002652270.1| flagellar hook protein flgE [Enterocytozoon bieneusi H348]
 gi|220062840|gb|EED41785.1| flagellar hook protein flgE [Enterocytozoon bieneusi H348]
          Length = 140

 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   + ++ +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVATTG 31


>gi|169831934|ref|YP_001717916.1| flagellar hook-associated protein FlgK [Candidatus Desulforudis
          audaxviator MP104C]
 gi|169638778|gb|ACA60284.1| flagellar hook-associated protein FlgK [Candidatus Desulforudis
          audaxviator MP104C]
          Length = 532

 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 9/55 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M +L     IA   L      M   + NIAN  T G       Y+R+    +   
Sbjct: 1  MSFL--GIEIARRSLHGHQQAMNTTAHNIANINTPG-------YKRQEAVLQSTP 46


>gi|157373201|ref|YP_001471801.1| flagellar hook-associated protein FlgK [Shewanella sediminis
           HAW-EB3]
 gi|157315575|gb|ABV34673.1| flagellar hook-associated protein FlgK [Shewanella sediminis
           HAW-EB3]
          Length = 457

 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E  ++    + Y AN + I  +  +  T L+
Sbjct: 418 SGVNMDEEAVNLIIYQQSYQANAKVISTADQLFQTILN 455



 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          ++  +I  SGL    A +   S N+ANA      PG   Y R+ +    V
Sbjct: 1  MSMLNIGMSGLNASMAALNTTSNNVANA----MVPG---YSRQQVMMSSV 43


>gi|73539456|ref|YP_299823.1| flagellar hook-associated protein FlgK [Ralstonia eutropha JMP134]
 gi|72122793|gb|AAZ64979.1| Protein of unknown function DUF1078 [Ralstonia eutropha JMP134]
          Length = 631

 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  ET  M    ++Y AN + I+ +  +  T + + R
Sbjct: 591 SGVNMDEETVSMLRFQQMYQANARVIQAASTLFDTIIGIGR 631


>gi|13472573|ref|NP_104140.1| flagellar basal body rod protein FlgB [Mesorhizobium loti
           MAFF303099]
 gi|14023319|dbj|BAB49926.1| flagellar basal-body rod protein; FlgB [Mesorhizobium loti
           MAFF303099]
          Length = 126

 Score = 38.4 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 39/122 (31%), Gaps = 22/122 (18%)

Query: 17  VQ--SARMQIISENIANARTTG-DTPGSDPYR----RKTISFEEVMHGSGGVRVKKIGVD 69
            Q  S R   I+ NIANA T G      +P+     R  +S +    G  G      G  
Sbjct: 14  AQWLSVRQSAIAGNIANANTPGYTANDVEPFEKVLDRTAVSLQTTEAGHLGSAATNAGFT 73

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLV---ETADMRETNRLYMANLQTIKQSHDMMT 126
                             G V  P+ N +V   +     E  R +  N   +K  H MM 
Sbjct: 74  VKP-----------QEDDG-VIMPSKNTVVLEDQLLKAGEVRRSFELNTAIVKAFHSMMM 121

Query: 127 TT 128
             
Sbjct: 122 MA 123


>gi|307637597|gb|ADN80047.1| Flagellar hook protein [Helicobacter pylori 908]
 gi|325996190|gb|ADZ51595.1| Flagellar hook protein [Helicobacter pylori 2018]
 gi|325997786|gb|ADZ49994.1| Flagellar hook protein [Helicobacter pylori 2017]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|241766921|ref|ZP_04764727.1| flagellar basal-body rod protein FlgF [Acidovorax delafieldii 2AN]
 gi|241362625|gb|EER58473.1| flagellar basal-body rod protein FlgF [Acidovorax delafieldii 2AN]
          Length = 246

 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 79  PGHPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           P  P A   +G ++  NVN +     M    R +   ++ ++ +     +   LL
Sbjct: 188 PNDPTARMLAGAIEGSNVNAVESMVGMIAAARQFEQQMKLLQTAETNDKSASQLL 242


>gi|239817164|ref|YP_002946074.1| flagellar basal body rod protein FlgF [Variovorax paradoxus S110]
 gi|239803741|gb|ACS20808.1| flagellar basal-body rod protein FlgF [Variovorax paradoxus S110]
          Length = 248

 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 79  PGHPVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           P  P A     +G V+  NVN +     M    R +   ++++  + +   +   LL
Sbjct: 189 PAEPDAAVTVTTGAVEGSNVNGVEAMVAMIANARSFEMQMKSMHSADENAQSANKLL 245


>gi|187926953|ref|YP_001893298.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12J]
 gi|241665282|ref|YP_002983641.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12D]
 gi|187728707|gb|ACD29871.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12J]
 gi|240867309|gb|ACS64969.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12D]
          Length = 245

 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 23/46 (50%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NVN+     +M E +R     +++++ S     +  +LLR
Sbjct: 198 GALEGSNVNLTDSLVNMIEISRQLEMQMKSLQTSDTNAQSANELLR 243


>gi|149194279|ref|ZP_01871376.1| flagellar basal-body rod protein [Caminibacter mediatlanticus TB-2]
 gi|149135454|gb|EDM23933.1| flagellar basal-body rod protein [Caminibacter mediatlanticus TB-2]
          Length = 262

 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)

Query: 87  SGIVKYPNVNVLVETADMRETNR---LYM 112
            G ++  NVNV+ E  D+ ETNR    Y 
Sbjct: 211 QGFIEKSNVNVIKEMTDLIETNRLVEQYQ 239


>gi|134280730|ref|ZP_01767440.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          305]
 gi|125657215|gb|ABN48703.1| flagellar basal body protein [Burkholderia pseudomallei]
 gi|134247752|gb|EBA47836.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          305]
          Length = 124

 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 9/46 (19%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L  +  +  +I+ N+AN  T G       YR + + F+  +  +GG
Sbjct: 18 LRAERTK--VIASNLANLDTPG-------YRARDLDFKRSLAEAGG 54


>gi|307719963|ref|YP_003891103.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM
           16294]
 gi|306978056|gb|ADN08091.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM
           16294]
          Length = 420

 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  N+ +     ++    R Y AN +++  +  MM   L++
Sbjct: 378 EGSNIEMSYGLTELIILQRAYDANSKSVTTADQMMQKALNM 418


>gi|251789169|ref|YP_003003890.1| flagellar basal body rod protein [Dickeya zeae Ech1591]
 gi|247537790|gb|ACT06411.1| flagellar basal body rod protein [Dickeya zeae Ech1591]
          Length = 251

 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +    +M   +R +   ++ I    D       +L
Sbjct: 204 GVLEGSNVNTVESMVEMISNSRRFEMQMKVISNVDDNTQRANQIL 248


>gi|15611911|ref|NP_223562.1| flagellar hook protein FlgE [Helicobacter pylori J99]
 gi|4155414|gb|AAD06422.1| putative FLAGELLAR BASAL-BODY/ROD/HOOKPROTEIN [Helicobacter pylori
           J99]
          Length = 605

 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      DM+   + L
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISL 603


>gi|39934722|ref|NP_946998.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           CGA009]
 gi|39648572|emb|CAE27093.1| possible flagellar basal-body rod protein FlgG [Rhodopseudomonas
           palustris CGA009]
          Length = 273

 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 18/36 (50%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +  NV++  +   M +  + Y A  + +  S++MM 
Sbjct: 231 EASNVDIADQMTTMVQAQQAYSACTRVVIASNEMML 266



 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 14/90 (15%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKKIG 67
          A +GL  QSA  + IS N+ANA+TT        ++    +F ++++    S  V  + + 
Sbjct: 10 ATTGLQAQSAAFENISGNVANAQTTA-------FKATNTAFSDLIYPPQVSDTVLWRSVL 62

Query: 68 VDQSTFVEEFDP--GHPVANASGI--VKYP 93
           +       +DP   H      G   V+ P
Sbjct: 63 TNGQQGSISYDPVSTHMAIGGEGYFTVEAP 92


>gi|295697723|ref|YP_003590961.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
 gi|295413325|gb|ADG07817.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
          Length = 265

 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  NV +      + E  RLY  + + +  +  MM+   +L
Sbjct: 219 QGYLEASNVELTDVMTKLMEAERLYALSARAVLTADQMMSMANNL 263



 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 9/54 (16%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSGGVRV 63
           SG++  S  +  ++ + AN  TTG       Y+ + ++F +++  H + GVR+
Sbjct: 8  ASGMSAASHWVNAMANDAANMNTTG-------YKSEDLAFSDLLAVHYAPGVRI 54


>gi|332305612|ref|YP_004433463.1| flagellar basal-body rod protein FlgB [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172941|gb|AEE22195.1| flagellar basal-body rod protein FlgB [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 133

 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 28/114 (24%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD--------- 69
           + RM++++ N+ANA T G       Y+ + I+F++ M  +   R + +            
Sbjct: 20  TERMEVLAGNLANANTPG-------YKARDINFQDAMRSAQSGRSQNLTRTHENHIKGNM 72

Query: 70  ----QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
               +  F     P     N        NV+V VE     +    Y A+++ + 
Sbjct: 73  QGSGEMQFRISNQPDTGDGN--------NVDVQVERNAFLDNGLRYQASVEFLN 118


>gi|283780143|ref|YP_003370898.1| flagellar hook-associated protein FlgK [Pirellula staleyi DSM
          6068]
 gi|283438596|gb|ADB17038.1| flagellar hook-associated protein FlgK [Pirellula staleyi DSM
          6068]
          Length = 565

 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 14/80 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
          L+++  IAN+ L      +Q++  NIANA T G       Y R+ +              
Sbjct: 3  LLSTLQIANNSLIASQLGLQVVGNNIANANTPG-------YIRQQVVLTPAPTQRYGGLL 55

Query: 58 -SGGVRVKKIGVDQSTFVEE 76
             GV V+ +      F+EE
Sbjct: 56 LGLGVEVQAVIQQTDRFLEE 75


>gi|260222467|emb|CBA32060.1| hypothetical protein Csp_D30230 [Curvibacter putative symbiont of
          Hydra magnipapillata]
          Length = 188

 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S     SGL   S  + +I  NIANA T G       +          +  +GG     I
Sbjct: 2  SFQTGLSGLNSSSKNLDVIGNNIANANTVGMKASRTEFAALI---ATQLGPAGGNLTPGI 58

Query: 67 GVDQSTFVEEFDPGH 81
          GV   T  ++F  G+
Sbjct: 59 GVSVGTVAQQFTQGN 73


>gi|113969612|ref|YP_733405.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-4]
 gi|113884296|gb|ABI38348.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-4]
          Length = 641

 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    +++ + S NIANA T G       Y R+  +   +     G      G
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAG-------YHRQVATQTTLDSQRLGNSFYGTG 58

Query: 68 VDQSTFVEEFD 78
             S     ++
Sbjct: 59 TYVSDVKRIYN 69


>gi|126730122|ref|ZP_01745934.1| flagellar hook-associated protein K [Sagittula stellata E-37]
 gi|126709502|gb|EBA08556.1| flagellar hook-associated protein K [Sagittula stellata E-37]
          Length = 482

 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 15/77 (19%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVR 62
          L  + + A SGL   +    +IS NI+NA        ++ Y R+T+    +  G+ GGV 
Sbjct: 3  LTGALNAAVSGLKANTRAASLISTNISNAT-------NEAYGRRTLELNALGSGTRGGVL 55

Query: 63 VKKIGVDQSTFVEEFDP 79
          V  +         ++DP
Sbjct: 56 VAGVV-------RQYDP 65


>gi|47224183|emb|CAG13103.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 550

 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 3/49 (6%)

Query: 83  VANASGIVKYPNV--NVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            A+A G + Y N   ++  + AD+ +  R   AN+  ++Q  +++ + L
Sbjct: 50  DADADGYIDYGNFSSSLREQLADLYQAIRS-SANVTLLQQYEEIVQSLL 97


>gi|114046844|ref|YP_737394.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-7]
 gi|113888286|gb|ABI42337.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-7]
          Length = 641

 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    +++ + S NIANA T G       Y R+  +   +     G      G
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAG-------YHRQVATQTTLDSQRLGNSFYGTG 58

Query: 68 VDQSTFVEEFD 78
             S     ++
Sbjct: 59 TYVSDVKRIYN 69


>gi|120554039|ref|YP_958390.1| flagellar hook-associated protein FlgK [Marinobacter aquaeolei
          VT8]
 gi|120323888|gb|ABM18203.1| flagellar hook-associated protein FlgK [Marinobacter aquaeolei
          VT8]
          Length = 688

 Score = 38.4 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 19/57 (33%), Gaps = 7/57 (12%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
          +   + NI NA T G       Y R+ + FE       G      GV  +      D
Sbjct: 19 LNTTANNITNANTPG-------YSRQEVQFETQEGRRTGAGTIGSGVSVADIRRLAD 68


>gi|330953723|gb|EGH53983.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7]
          Length = 581

 Score = 38.4 bits (89), Expect = 0.36,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           SG ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 536 SGALEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 579



 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 17/70 (24%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------- 59
          S + A SG+   + R+++   NIAN  T G       ++     F  +   +        
Sbjct: 2  SFNTAISGIQAANKRLEVAGNNIANVGTLG-------FKSSRAQFSALYASAQLGAGQHA 54

Query: 60 ---GVRVKKI 66
             GVR+  +
Sbjct: 55 VGDGVRLASV 64


>gi|89056685|ref|YP_512136.1| flagellar basal body rod protein FlgF [Jannaschia sp. CCS1]
 gi|88866234|gb|ABD57111.1| flagellar basal-body rod protein FlgF [Jannaschia sp. CCS1]
          Length = 240

 Score = 38.4 bits (89), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 27/91 (29%), Gaps = 29/91 (31%)

Query: 49  ISFEEVMHGSGGVRVKK---IGVDQSTFVEE--FDPGHPV------------------AN 85
             F  V   +G V V     I  D         + P  P+                  A+
Sbjct: 128 PIF--VPPQAGSVAVSSDGTISADGQPLTVVGLYLPNDPLELSRRSGTAFTVESGVQPAD 185

Query: 86  A----SGIVKYPNVNVLVETADMRETNRLYM 112
                 G ++  NV+ + + A M E  R Y 
Sbjct: 186 NARILQGFLEQSNVDPVAQIARMIEVQRAYE 216


>gi|82702459|ref|YP_412025.1| flagellar hook-associated protein FlgK [Nitrosospira multiformis
           ATCC 25196]
 gi|82410524|gb|ABB74633.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 638

 Score = 38.4 bits (89), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN+  E A++    + Y A  + I+ ++ M    L++ R
Sbjct: 600 VNLDEEAANLLRYQQAYQAASKVIQTANQMFDALLEITR 638


>gi|254182895|ref|ZP_04889488.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1655]
 gi|184213429|gb|EDU10472.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1655]
          Length = 131

 Score = 38.4 bits (89), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 9/46 (19%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L  +  +  +I+ N+AN  T G       YR + + F+  +  +GG
Sbjct: 25 LRAERTK--VIASNLANLDTPG-------YRARDLDFKRSLAEAGG 61


>gi|121997318|ref|YP_001002105.1| flagellar basal-body rod protein FlgF [Halorhodospira halophila
           SL1]
 gi|121588723|gb|ABM61303.1| flagellar basal-body rod protein FlgF [Halorhodospira halophila
           SL1]
          Length = 246

 Score = 38.4 bits (89), Expect = 0.37,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 17/100 (17%)

Query: 50  SFEEVMHGSGGV-----RVKKIGVDQSTFVE------EFDPGHPVANAS------GIVKY 92
                  G  G      R++ +  D +  V+          G P A+ +      G ++ 
Sbjct: 143 VITATPQGGAGAPIELDRLRLVNPDPTQLVKGEDGLIRHAEGEPAADDAQVRVRGGALEG 202

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            NVN+     +M +  R +  +++ +  + +   T+  LL
Sbjct: 203 SNVNMAESLVNMIDHARQFETHIKMLTAAEENEQTSAQLL 242


>gi|138894737|ref|YP_001125190.1| flagellar basal body rod protein FlgB [Geobacillus
           thermodenitrificans NG80-2]
 gi|134266250|gb|ABO66445.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 129

 Score = 38.4 bits (89), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 14/124 (11%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M    ++ H    GL   S R Q I++NIAN  T G        + K I F+  +  +  
Sbjct: 1   MSLFSSTIHWIEQGLRYASLRQQAIADNIANVDTPGC-------KAKDIRFQAELDRALQ 53

Query: 61  VRVKKIGVDQSTFVEEFDPGH---PVANAS-GIVKYPN-VNVLVETADMRETNRLYMANL 115
           +  K+   +   F    +        ANA+       N V++  E + + E    Y A +
Sbjct: 54  LEAKRTNPNHFPFRS--EQNGKIIVTANANISYNHNSNSVDIDQEMSKLAENQIYYNALI 111

Query: 116 QTIK 119
           + + 
Sbjct: 112 EQLN 115


>gi|330818585|ref|YP_004362290.1| flagellar hook protein FlgE [Burkholderia gladioli BSR3]
 gi|327370978|gb|AEA62334.1| flagellar hook protein FlgE [Burkholderia gladioli BSR3]
          Length = 414

 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  E  ++    R Y AN QTIK    +  T ++L
Sbjct: 379 DLTGELVNLITAQRDYQANAQTIKTQQAVDQTLINL 414



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---------EEVMHGSG-GVR 62
          SGL   S  + +I  NIANA TTG       ++  T  F           V +G G G +
Sbjct: 8  SGLQGASNDLDVIGNNIANANTTG-------FKAATAQFTDMYANSVSSAVANGIGIGTQ 60

Query: 63 VKKIGVD--QSTFVEEFDPGHPVANASGIVKYPN 94
          +  +     Q  F    +P +   N +G  +  N
Sbjct: 61 LAAVAQVFQQGGFTTTQNPLNMAINGNGFFQVTN 94


>gi|167905087|ref|ZP_02492292.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          NCTC 13177]
          Length = 134

 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 9/46 (19%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L  +  +  +I+ N+AN  T G       YR + + F+  +  +GG
Sbjct: 28 LRAERTK--VIASNLANLDTPG-------YRARDLDFKRSLAEAGG 64


>gi|218778840|ref|YP_002430158.1| flagellar hook-associated protein FlgK [Desulfatibacillum
          alkenivorans AK-01]
 gi|218760224|gb|ACL02690.1| Flagellar hook-associated protein FlgK [Desulfatibacillum
          alkenivorans AK-01]
          Length = 583

 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 26/68 (38%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  + ++  IA   +A     M ++S N+AN  T G T  +   + K            G
Sbjct: 1  MPGIRSALDIAVGAMATHQYGMDVVSHNVANVNTEGYTLQTVINKSKVPQASGGFMFGRG 60

Query: 61 VRVKKIGV 68
          V   +I  
Sbjct: 61 VETYEIRQ 68


>gi|317011795|gb|ADU85542.1| flagellar basal body rod protein FlgB [Helicobacter pylori
           SouthAfrica7]
          Length = 140

 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAK--- 49

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---------------------VANASGIVKYPNVNVLV 99
            +  +I  +QS+ V      +P                     +A   G     +V++ +
Sbjct: 50  -KKAEIFENQSSKVLPLAHTNPKHLDFENSINDGASLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGIVNYAIDSSKN 139


>gi|308273543|emb|CBX30145.1| hypothetical protein N47_D29540 [uncultured Desulfobacterium sp.]
          Length = 226

 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            ++  NVNV  E   M ET R + +  + ++ + +    
Sbjct: 180 YIEKSNVNVTEEMIRMVETLRTFESIQKALQNTDETTGK 218


>gi|253688975|ref|YP_003018165.1| flagellar basal-body rod protein FlgB [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755553|gb|ACT13629.1| flagellar basal-body rod protein FlgB [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 138

 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 21/124 (16%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQSTF 73
           L  Q    +I++ NIANA T G       Y+ + I F   +  +    RV   G+   T 
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFASQLSKTMEQGRVNGTGIALKTT 68

Query: 74  VEEFDPGHPVANA--SGIVKYPN--------VNVLVETADMRETNRLYMANLQTI-KQSH 122
                P           + + P+        V++  E  +  + +  Y  +L  +  Q  
Sbjct: 69  SVRHIPAQNFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKYQTSLTVLGGQIK 128

Query: 123 DMMT 126
            MM+
Sbjct: 129 GMMS 132


>gi|221069321|ref|ZP_03545426.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni KF-1]
 gi|220714344|gb|EED69712.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni KF-1]
          Length = 246

 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG ++  NVN +     M   +R +   ++ ++ +     +   LL
Sbjct: 197 SGSIEGSNVNSVETMVGMIAASRQFEQQMKLLQTAETNDKSASQLL 242


>gi|1196326|gb|AAB51418.1| flagellar hook protein [Borrelia burgdorferi]
          Length = 372

 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|307265481|ref|ZP_07547036.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          wiegelii Rt8.B1]
 gi|306919435|gb|EFN49654.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          wiegelii Rt8.B1]
          Length = 480

 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 20/77 (25%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
               IA +GL V    + +   NIANA TTG       Y R+ +    +   +      
Sbjct: 4  FQGLEIAKTGLFVSQKALDVTGHNIANANTTG-------YTRQVVDMASIAPPTTFGMYD 56

Query: 60 --------GVRVKKIGV 68
                  GV+++ I  
Sbjct: 57 QWGKAIGEGVKIQDIRQ 73



 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 19/38 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +  + Y A+ + I    +++ T ++
Sbjct: 436 SGVSLDEEMTNMIKYQKSYAASARVITAMDELLDTLIN 473


>gi|296452609|ref|ZP_06894303.1| flagellar hook-associated protein FlgK [Clostridium difficile
          NAP08]
 gi|296880979|ref|ZP_06904925.1| flagellar hook-associated protein FlgK [Clostridium difficile
          NAP07]
 gi|296258570|gb|EFH05471.1| flagellar hook-associated protein FlgK [Clostridium difficile
          NAP08]
 gi|296428000|gb|EFH13901.1| flagellar hook-associated protein FlgK [Clostridium difficile
          NAP07]
          Length = 436

 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M  L +  + ANSG+      +Q IS NI+N  T G       Y R+   F  
Sbjct: 1  MAGLFSILNTANSGMNSHQKAIQTISHNISNLDTEG-------YSRQRTEFAT 46



 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 16/33 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             V++  E  ++ +  R Y A+ + +  +  ++
Sbjct: 396 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLL 428


>gi|159045791|ref|YP_001534585.1| flagellar basal body rod protein FlgF [Dinoroseobacter shibae DFL
          12]
 gi|157913551|gb|ABV94984.1| flagellar basal-body rod protein FlgF [Dinoroseobacter shibae DFL
          12]
          Length = 238

 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 7/59 (11%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
          M +I+ NIAN  TTG       YR + + F E +  +G  +      D    +  +  G
Sbjct: 19 MTVIANNIANISTTG-------YRAEGLVFSEYVQATGHGQASISMTDSGAKITNYSQG 70



 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 3/34 (8%)

Query: 82  PVANA---SGIVKYPNVNVLVETADMRETNRLYM 112
           P  NA    G ++  NVN +VE A M E  R Y 
Sbjct: 183 PAENASVHQGFIEGSNVNPIVEVARMIEVQRRYE 216


>gi|224436455|ref|ZP_03657469.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
 gi|313142967|ref|ZP_07805160.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
 gi|313127998|gb|EFR45615.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
          Length = 745

 Score = 38.4 bits (89), Expect = 0.39,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 7/43 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          SG+      +  IS NIAN  T G       YRR    FE + 
Sbjct: 10 SGIKTHQFGLDSISNNIANVNTIG-------YRRNIPQFESLF 45



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+V     ++    R Y  N +      D++   L+L R
Sbjct: 701 HLETSNVDVGNALTELIVMQRGYSMNAKAFTTGDDLVKEALNLKR 745


>gi|159045918|ref|YP_001534712.1| flagellar hook-associated protein FlgK [Dinoroseobacter shibae
          DFL 12]
 gi|157913678|gb|ABV95111.1| flagellar hook-associated protein FlgK [Dinoroseobacter shibae
          DFL 12]
          Length = 485

 Score = 38.4 bits (89), Expect = 0.39,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 9/73 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSG-GVR 62
           ++   A SGL   S    ++S NIANA T G       Y  + +    V ++G G GV+
Sbjct: 4  TSTLGNALSGLTAASKAASVVSSNIANATTEG-------YGVRQVQTTSVSLNGQGSGVQ 56

Query: 63 VKKIGVDQSTFVE 75
          V  +  + +  V 
Sbjct: 57 VVSVSRNVNEGVL 69


>gi|206895357|ref|YP_002246680.1| flagellar basal-body rod protein FlgB [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206737974|gb|ACI17052.1| flagellar basal-body rod protein FlgB [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 113

 Score = 38.0 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 21/115 (18%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEV---MHGSGGVRVKKIGVDQSTFVEEFD 78
           +Q +  N+AN  T G       Y+R+ + F+ V   +   G     ++    S +V+  +
Sbjct: 17  LQAVQSNLANVDTPG-------YKRQEVDFQTVFMELQNHG-----ELLQPSSNYVKIDN 64

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 + +      NV+   E   + ET   Y    + + +        L +LR
Sbjct: 65  TTSWRLDGN------NVDPDKEITTLIETALWYQGITEMLSRHFSTARQVLQMLR 113


>gi|121596118|ref|YP_988014.1| flagellar basal-body rod protein FlgF [Acidovorax sp. JS42]
 gi|222112273|ref|YP_002554537.1| flagellar basal-body rod protein flgf [Acidovorax ebreus TPSY]
 gi|120608198|gb|ABM43938.1| flagellar basal-body rod protein FlgF [Acidovorax sp. JS42]
 gi|221731717|gb|ACM34537.1| flagellar basal-body rod protein FlgF [Acidovorax ebreus TPSY]
          Length = 246

 Score = 38.0 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 79  PGHPVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           P  P A   SG+++  NVN +     M    R +   ++ ++ +  
Sbjct: 188 PADPNARLRSGVLEGSNVNPVECMVGMIAAARQFEQQMRLLQTAES 233


>gi|769850|gb|AAA91361.1| flagellar distal rod protein [Borrelia burgdorferi N40]
          Length = 372

 Score = 38.0 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S +   SGL     RM ++  NIAN  T G       +++  ++F++++  S
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIG-------FKKGRVNFQDMISQS 48


>gi|238799104|ref|ZP_04642560.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
           43969]
 gi|238717051|gb|EEQ08911.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
           43969]
          Length = 137

 Score = 38.0 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 25/126 (19%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQSTF 73
           L  Q    +I+S NIANA T G       ++ + I F   +       R    GV  S  
Sbjct: 18  LRAQRQ--EILSSNIANADTPG-------FQARDIDFSSQLQKVMEQGRASGTGVSLSLT 68

Query: 74  VEEFDPGH----PVANASGIVKYPN--------VNVLVETADMRETNRLYMANLQTI-KQ 120
                P      P  +   + + P+        V++  E  +  + +  Y  +L  I  Q
Sbjct: 69  SARHIPASTVQPPDLDL--LFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTVISSQ 126

Query: 121 SHDMMT 126
              M++
Sbjct: 127 IKGMLS 132


>gi|73532548|dbj|BAE19832.1| flagellar hook protein [Edwardsiella tarda]
          Length = 76

 Score = 38.0 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 10/58 (17%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRVKKIGVD 69
          +   S+++ +I  NIAN++T G   GS       ++F ++  GS    GV V  +  D
Sbjct: 1  MNAASSQLDVIGNNIANSQTVGFKSGS-------VTFADMFAGSKVGLGVTVASVNQD 51


>gi|294339843|emb|CAZ88206.1| putative Flagellar basal body FlaE (FlgE) [Thiomonas sp. 3As]
          Length = 415

 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 7/92 (7%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG- 59
          +++   A SGL   S  +Q++  NIANA T G    +   +D Y              G 
Sbjct: 1  MSTFQTALSGLQAASTDLQVMGNNIANANTVGFKSSNAQFADTYAAAIAGTSPQYGQVGI 60

Query: 60 GVRVKKIGV--DQSTFVEEFDPGHPVANASGI 89
          G  V  +     Q       +P     N SG 
Sbjct: 61 GTSVATVAQQFSQGNIESTSNPLDVAINGSGF 92


>gi|291562041|emb|CBL40857.1| fagellar hook-basal body proteins [butyrate-producing bacterium
           SS3/4]
          Length = 265

 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 21/40 (52%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +++  NV+++ +   M  + R   +  Q++K    +M+ +
Sbjct: 219 MLEKSNVDMVEQMTAMMSSQRALQSAAQSLKMYDQIMSKS 258



 Score = 34.1 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 12 NSGLAVQSARMQIISENIANARTTG 36
           SG+  QS  +  IS N+ N +T G
Sbjct: 9  ASGMLTQSRNLNTISNNMVNIQTPG 33


>gi|323341389|ref|ZP_08081633.1| flagellar basal-body rod protein FlgB [Lactobacillus ruminis ATCC
          25644]
 gi|323091266|gb|EFZ33894.1| flagellar basal-body rod protein FlgB [Lactobacillus ruminis ATCC
          25644]
          Length = 121

 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + + V   R ++IS NIAN  T         Y+ K + FE  +  +
Sbjct: 9  TAMDVSQTRSELISNNIANVNTPN-------YKAKRVVFESQLSQA 47


>gi|108563933|ref|YP_628249.1| flagellar basal body rod protein FlgB [Helicobacter pylori HPAG1]
 gi|107837706|gb|ABF85575.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
          Length = 140

 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAK--- 49

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---------------------VANASGIVKYPNVNVLV 99
            +  +I  +QS+ V      +P                     +A   G     +V++ +
Sbjct: 50  -KKAEIFENQSSKVLPLAHTNPRHLDFEKSAKDGASLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKN 139


>gi|329849966|ref|ZP_08264812.1| flagellar hook-associated protein FlgK [Asticcacaulis
          biprosthecum C19]
 gi|328841877|gb|EGF91447.1| flagellar hook-associated protein FlgK [Asticcacaulis
          biprosthecum C19]
          Length = 713

 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 9/63 (14%)

Query: 4  LIASAHIANSG-LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          L +  +I  SG +  Q   ++I S+NI+N  T G       Y RK      V  G  G+ 
Sbjct: 3  LTSIMNIGVSGLMTAQEQ-LRITSDNISNVNTPG-------YIRKVSHQTAVNIGGKGMG 54

Query: 63 VKK 65
          V  
Sbjct: 55 VTS 57


>gi|327398477|ref|YP_004339346.1| flagellar hook-associated protein FlgK [Hippea maritima DSM 10411]
 gi|327181106|gb|AEA33287.1| flagellar hook-associated protein FlgK [Hippea maritima DSM 10411]
          Length = 580

 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V++  E A++ +  R Y AN + I    DM  T ++++R
Sbjct: 542 VSLDEEAANLIKFQRAYQANAKFISVVDDMTQTLINMVR 580



 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          M  +  + +I  SG+ V  A +     N+AN  T G +
Sbjct: 1  MPTIFDALNIGVSGIFVNKAAINTTGNNVANVNTPGYS 38


>gi|261856359|ref|YP_003263642.1| flagellar basal-body rod protein FlgF [Halothiobacillus
           neapolitanus c2]
 gi|261836828|gb|ACX96595.1| flagellar basal-body rod protein FlgF [Halothiobacillus
           neapolitanus c2]
          Length = 247

 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 82  PVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P A    ASG+++  NVN +     M E  RL+    + IK +    +    LL+
Sbjct: 191 PDAAVQVASGVLEGSNVNPVDSMVKMIEYGRLFEMQTKMIKTADANSSAADQLLK 245


>gi|206603146|gb|EDZ39626.1| Probable flagellar hook protein FlgE [Leptospirillum sp. Group II
           '5-way CG']
          Length = 457

 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 15/35 (42%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  +  DM    R Y A+   I   + ++ T L 
Sbjct: 420 DLGRQMVDMITAERGYQASASIIATDNTILNTLLT 454



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 24/76 (31%), Gaps = 21/76 (27%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------- 55
          ++S ++A SGL      M +I  NI N  T G   G          F  V          
Sbjct: 4  LSSMYVATSGLNAMGTDMSVIGNNITNLNTVGFKQG-------RAVFANVYGQTMTGRSN 56

Query: 56 -----HGSGGVRVKKI 66
                   GV V  I
Sbjct: 57 TVNTSQPGSGVYVDAI 72


>gi|170680219|ref|YP_001742374.1| flagellar basal body rod protein FlgF [Escherichia coli SMS-3-5]
 gi|170517937|gb|ACB16115.1| lateral flagellar rod protein LfgF [Escherichia coli SMS-3-5]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|293408368|ref|ZP_06652207.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471546|gb|EFF14029.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|268317780|ref|YP_003291499.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252]
 gi|262335314|gb|ACY49111.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252]
          Length = 242

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 12/93 (12%)

Query: 45  RRKTISFE--EVMHGSGGVRVKKIGVDQSTFVEEF-DPGHPVANASGIVKYPNVNVLVET 101
           R + + F   E +    G R      +          P        G ++  NVN ++  
Sbjct: 157 RLRIVRFARPEALQRVEGARFAATDQEPLPVETPHLRP--------GFLESSNVNPVLAM 208

Query: 102 ADMRETNRLYMANLQTIKQSHDMM-TTTLDLLR 133
            +M E    +    + I+ +  ++   T DL +
Sbjct: 209 TEMIEHFHRFETQQKVIQTTDQLLGQITRDLGK 241


>gi|225569956|ref|ZP_03778981.1| hypothetical protein CLOHYLEM_06051 [Clostridium hylemonae DSM
          15053]
 gi|225161426|gb|EEG74045.1| hypothetical protein CLOHYLEM_06051 [Clostridium hylemonae DSM
          15053]
          Length = 250

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 10/47 (21%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---FEEVM 55
           SG+  Q+ RM +IS N++N      TPG   Y+R       F+E M
Sbjct: 9  TSGVLTQTRRMNVISNNMSNV----STPG---YKRDQFVCKTFKEEM 48



 Score = 34.9 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 14/38 (36%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            NV  + E   M    R   ++ Q +K    ++   + 
Sbjct: 208 SNVEPVNEMTQMMAGERALQSSAQVLKMYDQIIGKVVT 245


>gi|182679722|ref|YP_001833868.1| flagellar basal body rod protein [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635605|gb|ACB96379.1| flagellar basal body rod protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 240

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 18/38 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           A G V+  NVN ++E + +   +R +      ++ S  
Sbjct: 191 AQGYVESANVNPILELSKLITVSRSFEQISTAMENSES 228


>gi|83646774|ref|YP_435209.1| flagellar hook protein FlgE [Hahella chejuensis KCTC 2396]
 gi|83634817|gb|ABC30784.1| Flagellar hook protein FlgE [Hahella chejuensis KCTC 2396]
          Length = 660

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 7/53 (13%)

Query: 83  VANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            AN+ G        ++  NV +  E A++    R Y A+ Q +  S++M+   
Sbjct: 601 AANSGGFGKVKGESIELSNVELSREFAEIIIIQRGYQASSQVMNVSNEMIENL 653


>gi|325289234|ref|YP_004265415.1| flagellar hook-associated protein FlgK [Syntrophobotulus
          glycolicus DSM 8271]
 gi|324964635|gb|ADY55414.1| flagellar hook-associated protein FlgK [Syntrophobotulus
          glycolicus DSM 8271]
          Length = 507

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          M    A    A SGL+V  +++     NI+NA T G       Y R+ + 
Sbjct: 1  MGSSFAGIATATSGLSVSQSQLNTTGHNISNADTAG-------YVRQQVV 43


>gi|302387772|ref|YP_003823594.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
 gi|302198400|gb|ADL05971.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
          Length = 256

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V+   E   M E  R Y   L+ ++ S + +  T++ LR
Sbjct: 217 SGVDFAQEMTRMIEAQRAYSYALKMVQTSDE-VEATINTLR 256



 Score = 33.7 bits (77), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 20/86 (23%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
          +  S +I   G   Q  ++ I+S N+AN  T G       ++ +   F +++H       
Sbjct: 1  MEQSFYIGALGALGQQTKLGIVSNNVANVNTVG-------FKAQYSVFSDLVHAEMRNTQ 53

Query: 58 -------SGGVRVKKIGVDQSTFVEE 76
                   G +V +   D S    +
Sbjct: 54 GNNGAKSGSGTKVDQTKTDFSAMPYK 79


>gi|225375212|ref|ZP_03752433.1| hypothetical protein ROSEINA2194_00837 [Roseburia inulinivorans
          DSM 16841]
 gi|225212879|gb|EEG95233.1| hypothetical protein ROSEINA2194_00837 [Roseburia inulinivorans
          DSM 16841]
          Length = 594

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 7/49 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
          M     S +I  SGL      +   S N+AN  T G       Y R+ +
Sbjct: 1  MANGFGSLYIGASGLQNSQNALNTTSNNLANVNTKG-------YVRQQV 42


>gi|163789653|ref|ZP_02184091.1| flagellar basal-body rod protein FlgB [Carnobacterium sp. AT7]
 gi|159875185|gb|EDP69251.1| flagellar basal-body rod protein FlgB [Carnobacterium sp. AT7]
          Length = 125

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 45/140 (32%), Gaps = 26/140 (18%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD          + L   S R ++IS NIAN  T G       Y+   + FE ++     
Sbjct: 1   MDPTYNLMK---NALDAASMRQEMISSNIANVNTDG-------YKVNKVEFESILDNVSK 50

Query: 61  VRVKKIGVD--------QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL-- 110
                   D                   +     +G     NV++ +E A+  E +    
Sbjct: 51  GTTMNKTSDLHIGFENLNEVTPVVSKRTNTSVKENGN----NVDIDIEMAE--EASNSIY 104

Query: 111 YMANLQTIKQSHDMMTTTLD 130
           Y   +  +   + M+ + + 
Sbjct: 105 YNGLVTQLNAKYAMLRSVIT 124


>gi|126668555|ref|ZP_01739509.1| flagellar basal-body rod protein B [Marinobacter sp. ELB17]
 gi|126626960|gb|EAZ97603.1| flagellar basal-body rod protein B [Marinobacter sp. ELB17]
          Length = 136

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++  I    L  +  R +I++ N+ANA T G       ++ + I F+ +M  + 
Sbjct: 7  SALGIHQYALQARVQRAEILANNLANADTPG-------FKARDIDFQAIMKRAQ 53


>gi|90415321|ref|ZP_01223255.1| flagellar basal-body rod protein FlgB [marine gamma
          proteobacterium HTCC2207]
 gi|90332644|gb|EAS47814.1| flagellar basal-body rod protein FlgB [marine gamma
          proteobacterium HTCC2207]
          Length = 128

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 7/57 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          M    A+  I    L +++ RM+++S+NIANA T G       ++ + I F+ V++ 
Sbjct: 2  MKMFDAAFGIHEKALDLRAKRMEVLSQNIANADTPG-------FKARDIDFKNVLNN 51


>gi|83576781|gb|ABC23332.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 472

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M  L +S ++A S +  QS+ +  IS N+AN+ T G       Y+    SF  ++ G+G
Sbjct: 13 MSSLSSSLNVAVSAMNAQSSSVSAISNNLANSSTIG-------YKTSNASFYSLVTGTG 64


>gi|330972414|gb|EGH72480.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 582

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           SG ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 537 SGALEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580



 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 17/70 (24%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------- 59
          S + A SG+   + R+++   NIAN  T G       ++     F  +   +        
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANVGTLG-------FKSSRAQFSALYASAQLGAGQHA 54

Query: 60 ---GVRVKKI 66
             GVR+  +
Sbjct: 55 VGDGVRLASV 64


>gi|260893878|ref|YP_003239975.1| flagellar basal-body rod protein FlgB [Ammonifex degensii KC4]
 gi|260866019|gb|ACX53125.1| flagellar basal-body rod protein FlgB [Ammonifex degensii KC4]
          Length = 133

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 41/111 (36%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L   + R ++I++N+AN  T G       +++  + FEE +  +            +   
Sbjct: 16  LDAAALRQRVIADNLANVDTPG-------FKKGVVRFEEELKRAL----------NAPLP 58

Query: 75  EE-FDPGH-----PVAN--------------ASGIVKYPNVNVLVETADMR 105
               DP H     P+                A G     NV+V  +  ++ 
Sbjct: 59  LRTTDPRHFPSPVPLEKVSPRVERDYFTSMRADGN----NVDVDEQMVNLV 105


>gi|148254600|ref|YP_001239185.1| flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
 gi|146406773|gb|ABQ35279.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
          Length = 412

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          L  +   A S L  QS+ + +IS+NI+NA TTG
Sbjct: 3  LSGALSSAISALNAQSSSLAMISDNISNADTTG 35


>gi|330445345|ref|ZP_08308997.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi
          subsp. mandapamensis svers.1.1.]
 gi|328489536|dbj|GAA03494.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi
          subsp. mandapamensis svers.1.1.]
          Length = 131

 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 7/39 (17%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           R + ++ NIANA T G       Y+ K I F+  ++ +
Sbjct: 21 KRAETLASNIANANTPG-------YKAKDIDFQRALNAA 52


>gi|315637965|ref|ZP_07893151.1| flagellar basal-body rod protein [Campylobacter upsaliensis JV21]
 gi|315482000|gb|EFU72618.1| flagellar basal-body rod protein [Campylobacter upsaliensis JV21]
          Length = 270

 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 14/35 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             G  +  NVN + E   + E NR+     + +  
Sbjct: 219 KQGFSQGSNVNPVSEMVGLIEANRMVEMYQKVMTA 253


>gi|227112522|ref|ZP_03826178.1| flagellar basal body rod protein FlgF [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 251

 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +    DM    R +   ++ I    D       +L
Sbjct: 204 GVIEGSNVNTVDTMVDMIANARRFEMQMKIISSVDDNAQRANQIL 248


>gi|146281768|ref|YP_001171921.1| flagellar basal body rod protein FlgB [Pseudomonas stutzeri A1501]
 gi|145569973|gb|ABP79079.1| flagellar basal-body rod protein FlgB [Pseudomonas stutzeri A1501]
          Length = 134

 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 52/140 (37%), Gaps = 29/140 (20%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-----EEVMHGSGG 60
            +  I    L  +S R ++++ NIANA T         Y+ + + F     E+   G GG
Sbjct: 7   KALGIHEKALGFRSQRAEVLANNIANADTPN-------YKARDLDFGSVLAEQSAQGQGG 59

Query: 61  ----------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                     +  + + +  ++      P HP  + +       V++ +E ++  +    
Sbjct: 60  FAATRTSDRHIAAEGLEIADASLRFR-TPAHPSLDQN------TVDLQIEQSNYAKNAVD 112

Query: 111 YMANLQTIKQSHDMMTTTLD 130
           + A+   +      + + L 
Sbjct: 113 FQASFTLLNSKFQGLMSALR 132


>gi|160896082|ref|YP_001561664.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
 gi|160361666|gb|ABX33279.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
          Length = 160

 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 44/131 (33%), Gaps = 33/131 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L  +  R   I+ NIANA T G       Y  +  +F E +           G    T  
Sbjct: 41  LRAERQR--AIASNIANADTPG-------YVARDFNFREALTAVTS------GPSPMTLA 85

Query: 75  EEFDPGH---PVANAS-------GI-----VKYPN--VNVLVETADMRETNRLYMANLQT 117
                GH   P A +        G          N  V++  E A+  +    Y A L+ 
Sbjct: 86  SVSQGGHIPLPAAASGQSAQSHLGYSVQAQTNMDNNTVDLDRERANFVDNAVRYEATLRF 145

Query: 118 IK-QSHDMMTT 127
           +  Q+  M++ 
Sbjct: 146 LNGQAKTMLSA 156


>gi|312135857|ref|YP_004003195.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
          owensensis OL]
 gi|311775908|gb|ADQ05395.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          owensensis OL]
          Length = 133

 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  +     +    L     R +IIS NIANA T G       Y+ K ++FE  +  S
Sbjct: 1  MINMFDKIDLYTKALDWAWKRNEIISNNIANADTPG-------YKAKDLNFEAFLQRS 51


>gi|306813302|ref|ZP_07447495.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
 gi|305854065|gb|EFM54504.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|296274029|ref|YP_003656660.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
 gi|296098203|gb|ADG94153.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
          Length = 241

 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            G ++  NVN ++    + E  R Y    + I     M  T +  L +
Sbjct: 193 QGSLEQSNVNSVMAMVQLIEAQRSYEQAQKGITGIDSMNKTIIQKLGN 240


>gi|224825170|ref|ZP_03698276.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002]
 gi|224602841|gb|EEG09018.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002]
          Length = 598

 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 21/40 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             VN+  E A++ +  + Y A+ + I+ +  + ++ L + 
Sbjct: 559 SGVNLDEEAANLIKYQQAYQASSKVIQIAQQLFSSLLQIG 598



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   I  SGL      + + S NI+N  T G       Y R+          S      
Sbjct: 3  TSIFSIGVSGLNAAQGALTVTSHNISNVNTAG-------YTRQVTQQAARYPQSASYGFI 55

Query: 65 KIGVDQSTFVEEFD 78
            GVD +     +D
Sbjct: 56 GQGVDLTHVNRVYD 69


>gi|218703526|ref|YP_002411045.1| flagellar basal body rod protein FlgF [Escherichia coli UMN026]
 gi|293403356|ref|ZP_06647447.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298378967|ref|ZP_06988848.1| flagellar basal-body rod protein FlgF [Escherichia coli FVEC1302]
 gi|300900358|ref|ZP_07118534.1| flagellar basal body rod protein FlgF [Escherichia coli MS 198-1]
 gi|300936127|ref|ZP_07151066.1| flagellar basal body rod protein FlgF [Escherichia coli MS 21-1]
 gi|218430623|emb|CAR11489.1| Lateral flagellar rod protein (FlgF-like) [Escherichia coli UMN026]
 gi|291429209|gb|EFF02229.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298280080|gb|EFI21584.1| flagellar basal-body rod protein FlgF [Escherichia coli FVEC1302]
 gi|300356126|gb|EFJ71996.1| flagellar basal body rod protein FlgF [Escherichia coli MS 198-1]
 gi|300458705|gb|EFK22198.1| flagellar basal body rod protein FlgF [Escherichia coli MS 21-1]
 gi|323171065|gb|EFZ56714.1| flagellar basal-body rod protein FlgF [Escherichia coli LT-68]
 gi|323191539|gb|EFZ76800.1| flagellar basal-body rod protein FlgF [Escherichia coli RN587/1]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|78355403|ref|YP_386852.1| flagellar basal body rod protein FlgB [Desulfovibrio
          desulfuricans subsp. desulfuricans str. G20]
 gi|78217808|gb|ABB37157.1| flagellar basal-body rod protein FlgB [Desulfovibrio
          desulfuricans subsp. desulfuricans str. G20]
          Length = 155

 Score = 38.0 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 8/59 (13%)

Query: 1  MDYLIAS-AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L      +    + +Q  R  +I  N+AN RT G       Y+ + + FE+ +  +
Sbjct: 20 MKTLFGQHMEVTAKVMDMQLKRQNVIMSNMANVRTPG-------YKARELDFEKDLQAA 71


>gi|331645419|ref|ZP_08346523.1| putative flagella basal body rod protein [Escherichia coli M605]
 gi|323975929|gb|EGB71023.1| fagellar hook-basal body protein [Escherichia coli TW10509]
 gi|331045581|gb|EGI17707.1| putative flagella basal body rod protein [Escherichia coli M605]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|297538897|ref|YP_003674666.1| flagellar basal-body rod protein FlgF [Methylotenera sp. 301]
 gi|297258244|gb|ADI30089.1| flagellar basal-body rod protein FlgF [Methylotenera sp. 301]
          Length = 246

 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 3/58 (5%)

Query: 78  DPGHPVANAS---GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +P    AN     G ++  NVNV+     M    R +   ++ ++ + +       LL
Sbjct: 186 NPAEVDANVHVVGGALESSNVNVIDAMVSMISLARQFETQMKLMQSAENNANKASQLL 243


>gi|268679766|ref|YP_003304197.1| flagellar hook-associated protein FlgK [Sulfurospirillum
          deleyianum DSM 6946]
 gi|268617797|gb|ACZ12162.1| flagellar hook-associated protein FlgK [Sulfurospirillum
          deleyianum DSM 6946]
          Length = 614

 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 14/78 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE--VMHGSG-- 59
          + ++ +   S L      +   S+NIAN         +  Y R+ ++      ++  G  
Sbjct: 3  IFSTLNTGTSALNAAQVAVATTSQNIANVD-------NPYYTRQRVTLSASDALNTKGVS 55

Query: 60 ---GVRVKKIGVDQSTFV 74
             GV +  I      FV
Sbjct: 56 IGTGVSITSIVRIHDEFV 73



 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             KIG D ST    +D    + ++  +       VN   E A++ +    Y A  + I  
Sbjct: 542 TTKIGSDASTANSNYDTNDALYSSVYTQYQSVSGVNKDEELANLIQYQSSYSAAAKIITT 601

Query: 121 SHDMMTTTLDL 131
              M+ T L +
Sbjct: 602 IDQMLETLLGI 612


>gi|157959896|ref|YP_001499930.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC
           700345]
 gi|157844896|gb|ABV85395.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC
           700345]
          Length = 457

 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E  ++    + Y AN + I  +  +  T L+
Sbjct: 418 SGVNMDEEGVNLIIYQQSYQANAKVISTADQLFQTILN 455



 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 11/68 (16%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----GG 60
          ++  +I  SGL    A +   S N++NA      PG   Y R+ +    V +G+     G
Sbjct: 1  MSMLNIGMSGLNASMAALTATSNNVSNA----MVPG---YSRQQVVMSSVGNGTYGSGSG 53

Query: 61 VRVKKIGV 68
          V V  +  
Sbjct: 54 VMVDGVRR 61


>gi|331671805|ref|ZP_08372601.1| putative flagella basal body rod protein [Escherichia coli TA280]
 gi|59889781|emb|CAH19137.1| Lateral flagellar rod protein (FlgF-like) [Escherichia coli]
 gi|284920045|emb|CBG33102.1| lateral flagellar rod protein (FlgF-like) [Escherichia coli 042]
 gi|331070794|gb|EGI42153.1| putative flagella basal body rod protein [Escherichia coli TA280]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|330943208|gb|EGH45615.1| flagellar hook protein FlgE [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 565

 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           SG ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 520 SGALEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 563


>gi|327254555|gb|EGE66171.1| flagellar basal-body rod protein FlgF [Escherichia coli STEC_7v]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|253573515|ref|ZP_04850858.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847043|gb|EES75048.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 135

 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 28/133 (21%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPY-RRKTISFEEVMHGS------------G 59
           + +   + R  +I+ NIAN  T        PY +R ++SFE ++                
Sbjct: 14  TAIQAANLRQGVIANNIANVDT--------PYFKRSSVSFESMLQAEMNGNMPALQGRRT 65

Query: 60  GVR--VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            VR  V     +    V   D    + N        NV++  E   + E    Y A ++ 
Sbjct: 66  DVRHFVIGPTTEVPEPVVSVDQSTAMNNNQN-----NVDIDSEMTKLAENQLRYNAYIEQ 120

Query: 118 IKQSHDMMTTTLD 130
           +     M  T ++
Sbjct: 121 LNYLIKMKRTVVE 133


>gi|254519397|ref|ZP_05131453.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA]
 gi|226913146|gb|EEH98347.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA]
          Length = 257

 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 21/38 (55%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            G ++  NV++  E ++M  T R +  + + +K + +M
Sbjct: 210 QGSLEGSNVDIATEFSEMILTQRAFELSSRGVKTADEM 247



 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +G+     ++  IS NIAN+ T G       Y++  + F++++  S
Sbjct: 10 TGMNANQDKLDAISNNIANSTTMG-------YKKIDVGFKDLLTES 48


>gi|148554192|ref|YP_001261774.1| flagellar basal-body rod protein FlgB [Sphingomonas wittichii
          RW1]
 gi|148499382|gb|ABQ67636.1| flagellar basal-body rod protein FlgB [Sphingomonas wittichii
          RW1]
          Length = 115

 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 10/57 (17%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          D L     I    L ++S R+ +++ NIANA     TP    Y+ + I F++ +  +
Sbjct: 3  DPLF---GIHGKALELRSQRLSMLASNIANA----ATPN---YKARDIDFQKALSDA 49


>gi|66046706|ref|YP_236547.1| flagellar basal body rod protein:protein of unknown function
           DUF1078:flagellar basal body FlaE [Pseudomonas syringae
           pv. syringae B728a]
 gi|63257413|gb|AAY38509.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078:Flagellar basal body FlaE [Pseudomonas syringae
           pv. syringae B728a]
          Length = 582

 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           SG ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 537 SGALEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580



 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 17/70 (24%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------- 59
          S + A SG+   + R+++   NIAN  T G       ++     F  +   +        
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANVGTLG-------FKSSRAQFSALYASAQLGAGQHA 54

Query: 60 ---GVRVKKI 66
             GVR+  +
Sbjct: 55 VGDGVRLASV 64


>gi|301166803|emb|CBW26380.1| putative flagellar hook protein [Bacteriovorax marinus SJ]
          Length = 414

 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++     DM +T + + AN + +     ++   + L
Sbjct: 372 IEQSNVDITNNFVDMMKTQKSFSANSEAMSAIDGLLKNVIAL 413


>gi|57505520|ref|ZP_00371447.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
 gi|57016067|gb|EAL52854.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
          Length = 270

 Score = 38.0 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 14/35 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             G  +  NVN + E   + E NR+     + +  
Sbjct: 219 KQGFSQGSNVNPVSEMVGLIEANRMVEMYQKVMTA 253


>gi|331666547|ref|ZP_08367421.1| putative flagella basal body rod protein [Escherichia coli TA271]
 gi|331065771|gb|EGI37655.1| putative flagella basal body rod protein [Escherichia coli TA271]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|301645414|ref|ZP_07245355.1| flagellar basal body rod protein FlgF [Escherichia coli MS 146-1]
 gi|307136859|ref|ZP_07496215.1| flagellar basal body rod protein FlgF [Escherichia coli H736]
 gi|331640714|ref|ZP_08341861.1| putative flagella basal body rod protein [Escherichia coli H736]
 gi|301076298|gb|EFK91104.1| flagellar basal body rod protein FlgF [Escherichia coli MS 146-1]
 gi|315616826|gb|EFU97443.1| flagellar basal-body rod protein FlgF [Escherichia coli 3431]
 gi|331040088|gb|EGI12296.1| putative flagella basal body rod protein [Escherichia coli H736]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|296274022|ref|YP_003656653.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
 gi|296098196|gb|ADG94146.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
          Length = 487

 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  N+NV      +    R + A+ + I  S   + T + L
Sbjct: 443 VEASNINVATALTKLIIAQRAFEASSKAITTSDSFLDTAIKL 484


>gi|291287005|ref|YP_003503821.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884165|gb|ADD67865.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
          Length = 209

 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           P +     SG+++  +V+   E  DM  T   + AN  +++   DM+
Sbjct: 155 PENLYMLRSGMLEVSDVDYAREVVDMIVTKNAFSANTSSVRTYDDML 201


>gi|225851146|ref|YP_002731380.1| flagellar hook-associated protein FlgK [Persephonella marina EX-H1]
 gi|225645441|gb|ACO03627.1| flagellar hook-associated protein FlgK [Persephonella marina EX-H1]
          Length = 485

 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 22/39 (56%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN+  E  ++ +  R Y A+ + I  + +++ T L L++
Sbjct: 447 VNLDEELINLTKLQRAYEASAKIINVTDELLQTLLGLVK 485



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 9/65 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  S  IA   L      +   + NI+N  T G       Y RK      +   +GGV +
Sbjct: 3  LFYSLSIAGQSLLTHKNAINTTNSNISNVYTDG-------YSRKIPQLANIP--TGGVEL 53

Query: 64 KKIGV 68
          K +  
Sbjct: 54 KTVER 58


>gi|225849064|ref|YP_002729228.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225644050|gb|ACN99100.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 483

 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 22/39 (56%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN+  E  ++ +  R Y A+ + I  + ++M T L+L +
Sbjct: 445 VNMDEELINLSKLQRSYQASARIITVTDELMQTILNLGK 483


>gi|146341903|ref|YP_001206951.1| flagellar basal body rod protein FlgF [Bradyrhizobium sp. ORS278]
 gi|146194709|emb|CAL78734.1| putative flagellar basal-body rod protein (flgF or flgG)
           [Bradyrhizobium sp. ORS278]
          Length = 254

 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV+ + E + M E  R Y      ++   D+  + ++
Sbjct: 203 QQGYIEKSNVSAVGEMSKMVEVMRAYTQVANMLQVQSDLRKSAIE 247


>gi|323705449|ref|ZP_08117024.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535351|gb|EGB25127.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 136

 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 15/117 (12%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------ 58
             +  + +  L     R ++IS NIAN  T G       ++R  ++FE +++ +      
Sbjct: 6   FNTVDLMSKALDASELRNEVISNNIANVDTPG-------FKRSDVNFESILNDAINSNKL 58

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGI-VKYPNVNVLVETADMRETNRLYMA 113
            G V  K      ST ++  +P     N++ + +   NV++ VE +++ +    Y A
Sbjct: 59  TGFVTDKNHIPINSTSIDNIEPQIVQDNSTSMRLDGNNVDIDVEMSNLAKNQLYYDA 115


>gi|256020229|ref|ZP_05434094.1| flagellar basal body rod protein FlgF [Shigella sp. D9]
 gi|260853467|ref|YP_003227358.1| putative lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|260866414|ref|YP_003232816.1| putative lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|332281391|ref|ZP_08393804.1| lateral flagellar rod protein [Shigella sp. D9]
 gi|257752116|dbj|BAI23618.1| predicted lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|257762770|dbj|BAI34265.1| predicted lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|323158102|gb|EFZ44201.1| flagellar basal-body rod protein FlgF [Escherichia coli EPECa14]
 gi|323178493|gb|EFZ64071.1| flagellar basal-body rod protein FlgF [Escherichia coli 1180]
 gi|323181548|gb|EFZ66968.1| flagellar basal-body rod protein FlgF [Escherichia coli 1357]
 gi|332103743|gb|EGJ07089.1| lateral flagellar rod protein [Shigella sp. D9]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|254419105|ref|ZP_05032829.1| conserved domain protein [Brevundimonas sp. BAL3]
 gi|196185282|gb|EDX80258.1| conserved domain protein [Brevundimonas sp. BAL3]
          Length = 588

 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E   +  T R Y A+ + I  + +M+   +++ R
Sbjct: 548 STVDLSAEFTGLITTQRAYSASSKIITTADEMLAELINIKR 588


>gi|170021359|ref|YP_001726313.1| flagellar basal body rod protein FlgF [Escherichia coli ATCC 8739]
 gi|169756287|gb|ACA78986.1| flagellar basal-body rod protein FlgF [Escherichia coli ATCC 8739]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|310764859|gb|ADP09809.1| Flagellar basal-body rod protein FlgF [Erwinia sp. Ejp617]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 10/64 (15%)

Query: 13 SGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
          + ++  +A +    + S N+ANA TTG       +R +  +F  V      +  + + VD
Sbjct: 7  TAMSAANAALNRQAVTSNNMANAATTG-------FRAQMAAFRAVPVEGETIATRALVVD 59

Query: 70 QSTF 73
           + +
Sbjct: 60 STPY 63



 Score = 37.2 bits (86), Expect = 0.74,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV+ +    +M  T R +  N++TI+ + +       LL
Sbjct: 201 EGSNVSPVKAMTEMIATARSFDMNMKTIRTADENAKQANQLL 242


>gi|194871812|ref|XP_001972911.1| GG15791 [Drosophila erecta]
 gi|190654694|gb|EDV51937.1| GG15791 [Drosophila erecta]
          Length = 202

 Score = 38.0 bits (88), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
           + + F      S G + + +  D+S F E  DP    AN SG+V + NVN+  E 
Sbjct: 10  QLVIFLSAAQHSLGAKFEYVLEDESIFSECLDPPPGYANISGLVDFSNVNL--EM 62


>gi|119715016|ref|YP_921981.1| flagellar hook-associated protein FlgK [Nocardioides sp. JS614]
 gi|119535677|gb|ABL80294.1| flagellar hook-associated protein FlgK [Nocardioides sp. JS614]
          Length = 466

 Score = 38.0 bits (88), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 7/59 (11%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M    +S + A + L  Q   + + S N+AN  T G       Y R+ +  E +   S 
Sbjct: 1  MAGSFSSINTALTALRYQQVALDVASTNVANVGTDG-------YVRRRVVGETLGAASS 52


>gi|330899403|gb|EGH30822.1| flagellar hook protein FlgE [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 581

 Score = 38.0 bits (88), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           SG ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 536 SGALEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 579



 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 17/70 (24%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------- 59
          S + A SG+   + R+++   NIAN  T G       ++     F  +   +        
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANVGTLG-------FKSSRAQFSALYASAQLGAGQHA 54

Query: 60 ---GVRVKKI 66
             GVR+  +
Sbjct: 55 VGDGVRLASV 64


>gi|300817269|ref|ZP_07097487.1| flagellar basal body rod protein FlgF [Escherichia coli MS 107-1]
 gi|307313518|ref|ZP_07593139.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|300530245|gb|EFK51307.1| flagellar basal body rod protein FlgF [Escherichia coli MS 107-1]
 gi|306906686|gb|EFN37197.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|315059543|gb|ADT73870.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli W]
 gi|323379898|gb|ADX52166.1| fagellar hook-basal body protein [Escherichia coli KO11]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|27378814|ref|NP_770343.1| flagellar hook-associated protein [Bradyrhizobium japonicum USDA
          110]
 gi|27351963|dbj|BAC48968.1| flaN [Bradyrhizobium japonicum USDA 110]
          Length = 582

 Score = 38.0 bits (88), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDT 38
          IA SGL+    ++ + S NI+NA TTG T
Sbjct: 9  IAFSGLSATQVQISVTSSNISNADTTGYT 37


>gi|51246532|ref|YP_066416.1| flagellar basal-body rod protein (FlgF) [Desulfotalea
          psychrophila LSv54]
 gi|50877569|emb|CAG37409.1| related to flagellar basal-body rod protein (FlgF) [Desulfotalea
          psychrophila LSv54]
          Length = 248

 Score = 38.0 bits (88), Expect = 0.46,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 19/86 (22%)

Query: 10 IAN--SGLAVQSAR---MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          ++   S L+   +R   +  IS N+AN  TTG       +++ T+SFE +++        
Sbjct: 2  VSGKYSALSGALSRQQAISTISNNLANVNTTG-------FKKNTLSFESILNNQQQNSAE 54

Query: 60 GVRVKKIGVDQSTFVE-EFDPG-HPV 83
          G+   ++G   + F +  F P  +P+
Sbjct: 55 GINYSRVGKSSTDFKQGTFKPTENPM 80


>gi|163738061|ref|ZP_02145477.1| hypothetical protein RGBS107_06604 [Phaeobacter gallaeciensis
          BS107]
 gi|161388677|gb|EDQ13030.1| hypothetical protein RGBS107_06604 [Phaeobacter gallaeciensis
          BS107]
          Length = 238

 Score = 38.0 bits (88), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 7/39 (17%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M++++ NIAN+ TTG       YR + + F E +  + G
Sbjct: 19 MRVVANNIANSATTG-------YRAEGVIFSEFIQSAPG 50



 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            G ++  NVN + + A M E  R Y      ++     +   +
Sbjct: 190 QGFLEGSNVNAISQLARMVEIQRAYEMGQSFLETEDQRVRNAI 232


>gi|149184204|ref|ZP_01862522.1| flagellar proximal rod protein [Erythrobacter sp. SD-21]
 gi|148831524|gb|EDL49957.1| flagellar proximal rod protein [Erythrobacter sp. SD-21]
          Length = 115

 Score = 38.0 bits (88), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 7/50 (14%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
            I  + L ++S R+ ++  NIANA     TPG   Y+ + I F   +  
Sbjct: 6  FGIHGAALEIRSQRLGVLGSNIANA----ATPG---YKARDIDFAAALDA 48


>gi|325295410|ref|YP_004281924.1| flagellar basal-body rod protein FlgB [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065858|gb|ADY73865.1| flagellar basal-body rod protein FlgB [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 124

 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 20/112 (17%)

Query: 1   MDYLIASAH-IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M  L    + IA+   +    R +II  NIANA T         Y+ + + FE+ +    
Sbjct: 1   MSELFGKLNPIADMA-SFFLERSKIIQSNIANADT-------PFYKPRDLVFEKELESQL 52

Query: 60  GVRVK-----KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            ++        +   +  F           N +G      VNV  E A + E
Sbjct: 53  KLKKTDPRHFDVSQSRKKFKIV-----EFQNVNGY-DMNKVNVNEELAKLAE 98


>gi|71906388|ref|YP_283975.1| flagellar basal-body rod protein FlgB [Dechloromonas aromatica
          RCB]
 gi|71846009|gb|AAZ45505.1| Flagellar basal-body rod protein FlgB [Dechloromonas aromatica
          RCB]
          Length = 135

 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  +     + +  + +++ R Q+++ NIANA T         Y+ +  SFE  M  +
Sbjct: 1  MASIQQELSVFSQAMNLRTQRHQVLASNIANADTPN-------YKARDFSFESAMQNA 51


>gi|188495566|ref|ZP_03002836.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
 gi|188490765|gb|EDU65868.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 198 GFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|124516303|gb|EAY57811.1| probable flagellar hook protein FlgE [Leptospirillum rubarum]
          Length = 457

 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 15/35 (42%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  +  DM    R Y A+   I   + ++ T L 
Sbjct: 420 DLGRQMVDMITAERGYQASASIIATDNTILNTLLT 454



 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 24/76 (31%), Gaps = 21/76 (27%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------- 55
          ++S ++A SGL      M +I  NI N  T G   G          F  V          
Sbjct: 4  LSSMYVATSGLNAMGTDMSVIGNNITNLNTVGFKQG-------RAVFANVYGQTMTGRSN 56

Query: 56 -----HGSGGVRVKKI 66
                   GV V  I
Sbjct: 57 TVNTSQPGSGVYVDAI 72


>gi|220927554|ref|YP_002504463.1| flagellar hook-associated protein FlgK [Clostridium
          cellulolyticum H10]
 gi|219997882|gb|ACL74483.1| flagellar hook-associated protein FlgK [Clostridium
          cellulolyticum H10]
          Length = 537

 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 18/78 (23%)

Query: 1  MDYLIASAHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-----EV 54
          M       +IA SGL   Q   +  +  N++NA     TPG   Y R+           V
Sbjct: 1  MQQSFFGLNIALSGLYTAQRN-LDTVGHNLSNA----STPG---YSRQQSIQSASNPLAV 52

Query: 55 MHGSGGV----RVKKIGV 68
          M G+G V    +V  +  
Sbjct: 53 MDGTGMVGTGSQVTGVER 70


>gi|15607023|ref|NP_214405.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5]
 gi|2984276|gb|AAC07801.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5]
          Length = 241

 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 36/99 (36%), Gaps = 23/99 (23%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M     + +I   G+ +Q  ++ + + N+AN  T        P  +K        +   G
Sbjct: 1  MATDYQTIYILGGGMLLQERKLDVSTNNMANVNT--------PAFKKDYLTAVSYYVPNG 52

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           +V+                +P   ++  V YP VN ++
Sbjct: 53 QKVQN--------------TNPFEPSNNYV-YPIVNEVI 76


>gi|330975977|gb|EGH76043.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 581

 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           SG ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 536 SGALEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 579



 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 17/70 (24%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------- 59
          S + A SG+   + R+++   NIAN  T G       ++     F  +   +        
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANVGTLG-------FKSSRAQFSALYASAQLGAGQHA 54

Query: 60 ---GVRVKKI 66
             GVR+  +
Sbjct: 55 VGDGVRLASV 64


>gi|325295212|ref|YP_004281726.1| flagellar hook-associated protein FlgK [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065660|gb|ADY73667.1| flagellar hook-associated protein FlgK [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 451

 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 25/50 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A +  + +  +VN+  E  ++    R Y A  + +  + +++ T L ++R
Sbjct: 402 AISDKMKELSSVNMDEELLNLTRYQRAYEAAAKVVNVTDELLQTILGMVR 451



 Score = 37.6 bits (87), Expect = 0.65,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 9/65 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  S  IA+  L    A + + + NI+N  T G       Y R+T  F ++     GV V
Sbjct: 3  LFESLSIASQALLSNKAAINVTNRNISNVYTDG-------YSRETPVFADIP--GTGVTV 53

Query: 64 KKIGV 68
          + +  
Sbjct: 54 ETVRR 58


>gi|259907635|ref|YP_002647991.1| Flagellar basal-body rod protein FlgF [Erwinia pyrifoliae Ep1/96]
 gi|224963257|emb|CAX54741.1| Flagellar basal-body rod protein FlgF [Erwinia pyrifoliae Ep1/96]
 gi|283477477|emb|CAY73393.1| Flagellar basal-body rod protein flgF [Erwinia pyrifoliae DSM
          12163]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 10/64 (15%)

Query: 13 SGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
          + ++  +A +    + S N+ANA TTG       +R +  +F  V      +  + + VD
Sbjct: 7  TAMSAANAALNRQAVTSNNMANAATTG-------FRAQMAAFRAVPVEGETIATRALVVD 59

Query: 70 QSTF 73
           + +
Sbjct: 60 STPY 63



 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV+ +    +M  T R +  N++TI+ + +       LL
Sbjct: 201 EGSNVSPVKAMTEMIATARSFDMNMKTIRTADENAKQANQLL 242


>gi|149912833|ref|ZP_01901367.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp.
           AzwK-3b]
 gi|149813239|gb|EDM73065.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp.
           AzwK-3b]
          Length = 237

 Score = 38.0 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 8/48 (16%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMA--------NLQTIKQSHDMMT 126
            G ++  NV+ + + A M E  R Y          N +  +    M+ 
Sbjct: 190 QGFLEGSNVDPIAQVARMVEVQRAYEMGQSFLENENTRIRETLKTMIR 237


>gi|238919265|ref|YP_002932780.1| flagellar hook-associated protein FlgK, [Edwardsiella ictaluri
          93-146]
 gi|238868834|gb|ACR68545.1| flagellar hook-associated protein FlgK, putative [Edwardsiella
          ictaluri 93-146]
          Length = 550

 Score = 38.0 bits (88), Expect = 0.48,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 14/78 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          +    + A SGL+     + + S NI N  T G       Y R+T++  E    S     
Sbjct: 1  MANLINNAMSGLSAAQTALGVTSNNINNVYTAG-------YNRQTVTLAESNGTSTPAGF 53

Query: 59 --GGVRVKKIGVDQSTFV 74
             GV V  I  D + F+
Sbjct: 54 IGNGVTVSGIDRDYNQFI 71


>gi|154252984|ref|YP_001413808.1| hypothetical protein Plav_2542 [Parvibaculum lavamentivorans
          DS-1]
 gi|154156934|gb|ABS64151.1| protein of unknown function DUF1078 domain protein [Parvibaculum
          lavamentivorans DS-1]
          Length = 454

 Score = 38.0 bits (88), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
             S   A +G+  QS+ +  IS+NIAN++T G       ++R   +F++++  S
Sbjct: 3  FFGSMTTAITGIRAQSSALGHISDNIANSQTIG-------FKRTDTNFQDIVTAS 50



 Score = 37.2 bits (86), Expect = 0.86,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E + +  T + Y A  + +  + +++  TL++ R
Sbjct: 412 EASNVDIADEFSKLIVTQQAYTAGTRIVTTADELIRETLNMKR 454


>gi|329849962|ref|ZP_08264808.1| flagellar hook protein flgE [Asticcacaulis biprosthecum C19]
 gi|328841873|gb|EGF91443.1| flagellar hook protein flgE [Asticcacaulis biprosthecum C19]
          Length = 474

 Score = 38.0 bits (88), Expect = 0.48,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E   +  T R Y A  + I  S +M+   L L R
Sbjct: 432 EASTVDLAQEFTGLITTQRAYSAASKIITTSDEMLQELLALKR 474



 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 7/37 (18%)

Query: 24 IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           IS NIANA TTG       Y+R T +F  ++ G+ G
Sbjct: 23 TISNNIANANTTG-------YKRVTTNFTNLVSGTSG 52


>gi|188528351|ref|YP_001911038.1| flagellar basal body rod protein FlgB [Helicobacter pylori Shi470]
 gi|188144591|gb|ACD49008.1| flagellar basal body rod protein FlgB [Helicobacter pylori Shi470]
          Length = 140

 Score = 38.0 bits (88), Expect = 0.48,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAK--- 49

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---------------------VANASGIVKYPNVNVLV 99
            +  +I  +QS+ V      +P                     +A   G     +V++ +
Sbjct: 50  -KKAEIFENQSSKVLPLAHTNPRHLDFENSAKDGVSLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKN 139


>gi|330880522|gb|EGH14671.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea
          str. race 4]
          Length = 390

 Score = 38.0 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|114569242|ref|YP_755922.1| flagellar hook-associated protein FlgK [Maricaulis maris MCS10]
 gi|114339704|gb|ABI64984.1| flagellar hook-associated protein FlgK [Maricaulis maris MCS10]
          Length = 713

 Score = 38.0 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 9/67 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGV 61
          L      A SGL    A ++  S N+AN  T G       Y R   S E    G  + GV
Sbjct: 3  LSGILGNALSGLQASQAGLRASSNNVANVNTPG-------YARTIASVEARNVGGVAMGV 55

Query: 62 RVKKIGV 68
          +V  I  
Sbjct: 56 QVNGIVR 62


>gi|160939652|ref|ZP_02087000.1| hypothetical protein CLOBOL_04544 [Clostridium bolteae ATCC
          BAA-613]
 gi|158437443|gb|EDP15207.1| hypothetical protein CLOBOL_04544 [Clostridium bolteae ATCC
          BAA-613]
          Length = 246

 Score = 38.0 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 7/47 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          + +  + A SG+ +    + + + NIAN +T+G       Y+ K + 
Sbjct: 1  MFSGFYTAASGMLMNQRSLNMAANNIANVKTSG-------YKPKRLV 40



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++   VN+  E     E  R + +  + +     M   T  ++ +
Sbjct: 198 QGKLEQSGVNLNNEMTRAMEVQRAFQSCGKALTIIDQMNQKTANEIGK 245


>gi|74317646|ref|YP_315386.1| flagellar hook-associated protein FlgK [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057141|gb|AAZ97581.1| Flagellar hook-associated protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 629

 Score = 38.0 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E  ++    + Y A  + ++ + +M    L + R
Sbjct: 589 SGVNLDEEATNLLRYQQAYQAAAKVMQVASEMFDALLTIGR 629



 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 25/74 (33%), Gaps = 7/74 (9%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   I  S LA   A +     NIANA T G       Y R+ +     +  + G    
Sbjct: 3  TSILGIGQSALAAAQAGLSTTGHNIANASTPG-------YSRQVVVQGAALPQNFGFGFM 55

Query: 65 KIGVDQSTFVEEFD 78
            G    T    ++
Sbjct: 56 GQGTQIETVKRVYN 69


>gi|23016628|ref|ZP_00056382.1| COG1815: Flagellar basal body protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 157

 Score = 38.0 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 29/126 (23%)

Query: 17  VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI---------G 67
            Q    ++++ NIANA T    P       K + F++V+ G+    V             
Sbjct: 43  AQRQ--EVLAGNIANANTPRYLPKDL----KDLDFKQVLAGTTEPEVGAATTNAKHIVPE 96

Query: 68  VDQSTFVEE-----FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V  S F        ++   P  NA        V +  + A + + N  Y A     ++  
Sbjct: 97  VTPSPFKAVTQRRTYE-STPDGNA--------VILEEQMAKLGDANSKYNAAAALFQKYQ 147

Query: 123 DMMTTT 128
            M+ T 
Sbjct: 148 KMIKTA 153


>gi|238028852|ref|YP_002913083.1| flagellar basal body rod protein FlgB [Burkholderia glumae BGR1]
 gi|237878046|gb|ACR30379.1| Flagellar basal-body rod protein FlgB [Burkholderia glumae BGR1]
          Length = 167

 Score = 38.0 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          MD L A        L V++ R ++IS NIANA T G       Y+ + + F   +  S
Sbjct: 7  MDKLDAEFAFGRQALDVRAYRQELISSNIANADTPG-------YQARDVDFASALGRS 57


>gi|315453407|ref|YP_004073677.1| flagellar hook protein FlgE [Helicobacter felis ATCC 49179]
 gi|315132459|emb|CBY83087.1| flagellar hook protein, FlgE [Helicobacter felis ATCC 49179]
          Length = 601

 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 18/45 (40%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      D++   ++L R
Sbjct: 557 YLETSNVNAGHSLTNLILMQRGYSMNAKAFTTGDDLIKEAINLKR 601



 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 7/43 (16%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          SG+      +  +S NIAN  T G       YRR    F+ + 
Sbjct: 10 SGIKTHQFGIDSVSNNIANINTVG-------YRRNDPEFKSLF 45


>gi|292489132|ref|YP_003532019.1| flagellar basal-body rod protein FlgF [Erwinia amylovora
          CFBP1430]
 gi|292900251|ref|YP_003539620.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291200099|emb|CBJ47225.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291554566|emb|CBA22179.1| Flagellar basal-body rod protein flgF [Erwinia amylovora
          CFBP1430]
 gi|312173290|emb|CBX81545.1| Flagellar basal-body rod protein flgF [Erwinia amylovora ATCC
          BAA-2158]
          Length = 245

 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 10/64 (15%)

Query: 13 SGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
          + ++  +A +    + S N+ANA TTG       +R +  +F  V      +  + + VD
Sbjct: 7  TAMSAANAALNRQAVTSNNMANAATTG-------FRAQMAAFRAVPVEGETIATRALVVD 59

Query: 70 QSTF 73
           + +
Sbjct: 60 STPY 63



 Score = 37.2 bits (86), Expect = 0.83,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV+ +    +M  T R +  N++TI+ + +       LL
Sbjct: 201 EGSNVSPVKAMTEMIATARSFDMNMKTIRTADENAKQANQLL 242


>gi|289679025|ref|ZP_06499915.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae FF5]
          Length = 137

 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           SG ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 92  SGALEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 135


>gi|187932642|ref|YP_001885066.1| flagellar basal body rod protein FlgG [Clostridium botulinum B str.
           Eklund 17B]
 gi|187720795|gb|ACD22016.1| flagellar hook-basal body complex protein [Clostridium botulinum B
           str. Eklund 17B]
          Length = 257

 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 5/57 (8%)

Query: 77  FDPGHPVANA-----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +   +PV NA      G+++  NVN   E   + E  R +  N + +    + +   
Sbjct: 193 YKGDNPVYNAVVNVRQGVLETSNVNPTEELVKLMEIKRQFETNQKFVSMQDETVQKA 249


>gi|167626161|ref|YP_001676455.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis
           HAW-EB4]
 gi|167356183|gb|ABZ78796.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis
           HAW-EB4]
          Length = 457

 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E  ++    + Y AN + I  +  +  T L+
Sbjct: 418 SGVNMDEEGVNLIIYQQSYQANAKVISTADQLFQTILN 455



 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 11/68 (16%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----SGG 60
          ++  +I  SGL    A +   S NI NA      PG   Y R+ +    V +G      G
Sbjct: 1  MSMLNIGMSGLNASMAALTATSNNINNA----MVPG---YSRQQVMLSSVGNGVYGSGSG 53

Query: 61 VRVKKIGV 68
          V V  +  
Sbjct: 54 VMVDGVRR 61


>gi|114706768|ref|ZP_01439668.1| flagellar basal-body rod protein B [Fulvimarina pelagi HTCC2506]
 gi|114537716|gb|EAU40840.1| flagellar basal-body rod protein B [Fulvimarina pelagi HTCC2506]
          Length = 126

 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 46/127 (36%), Gaps = 34/127 (26%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           S R  +++EN+AN  T G       Y  K I+ FE+V+  +   +               
Sbjct: 18  SHRQALVAENVANVNTPG-------YTAKDITPFEQVLDNTALAQTAS------------ 58

Query: 78  DPGHPVANASG------------IVKYPN--VNVLVETADMRETNRLYMANLQTIKQSHD 123
           +P H V    G             VK+    V V  E     E +R Y  N   +K  H 
Sbjct: 59  NPKHLVGFGGGTAEAEATEAVTWDVKHSGNSVAVEQEMMKAGEVSRDYSLNTSIVKSFHR 118

Query: 124 MMTTTLD 130
           M  TT+ 
Sbjct: 119 MFMTTIR 125


>gi|227873379|ref|ZP_03991638.1| possible flagellar basal body rod protein [Oribacterium sinus
           F0268]
 gi|227840782|gb|EEJ51153.1| possible flagellar basal body rod protein [Oribacterium sinus
           F0268]
          Length = 129

 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 18/107 (16%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------HGSGGVRVKKIGVD-QSTF 73
           R  +   NIAN  T         Y+ K ++FE  +         GG +   IG   QS  
Sbjct: 22  RQNLTVNNIANVDTPN-------YKSKYLTFENELLHRISTAEQGGRKKVAIGNAIQSQR 74

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                  +  +   G     NV++  E  ++ +T   Y   + ++  
Sbjct: 75  ARIHSTKNESSRLDGN----NVDMDQEQVELVKTTYAYQYMVNSVNN 117


>gi|157376210|ref|YP_001474810.1| flagellar hook-associated protein FlgK [Shewanella sediminis
          HAW-EB3]
 gi|157318584|gb|ABV37682.1| flagellar hook-associated protein FlgK [Shewanella sediminis
          HAW-EB3]
          Length = 638

 Score = 38.0 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 9/75 (12%)

Query: 5  IASAHIANSG-LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +   +IA +G LA QS  + + S NIANA T         Y R+      +     G   
Sbjct: 3  MNLLNIARTGVLASQSQ-LAVTSNNIANANT-------QGYHRQVAEQSSLESQRAGSEF 54

Query: 64 KKIGVDQSTFVEEFD 78
             G   S     ++
Sbjct: 55 YGSGTYISDVKRIYN 69


>gi|226225705|ref|YP_002759811.1| flagellar hook-associated protein 1 [Gemmatimonas aurantiaca T-27]
 gi|226088896|dbj|BAH37341.1| flagellar hook-associated protein 1 [Gemmatimonas aurantiaca T-27]
          Length = 482

 Score = 38.0 bits (88), Expect = 0.51,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E  +M    + Y A  + I  + +M+ T ++L
Sbjct: 443 SGVNTDEELVNMLRVQQSYQAAAKMITAADEMLKTLINL 481



 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 22/61 (36%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            IA S L      +Q IS N+ANA T G +         T       +   GV V  I 
Sbjct: 6  FSIARSALLSHQTALQTISHNVANAETPGFSRQEAVLAANTPVRLYNGNVGTGVHVATIQ 65

Query: 68 V 68
           
Sbjct: 66 R 66


>gi|220917700|ref|YP_002493004.1| flagellar basal-body rod protein FlgF [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955554|gb|ACL65938.1| flagellar basal-body rod protein FlgF [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 235

 Score = 38.0 bits (88), Expect = 0.51,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG ++  N   L  +  +    R Y A+LQ I+    +    +++ R
Sbjct: 184 AVRSGELELGNAGALEASIQLVSAQRAYEASLQAIQTYRQLDQRAVEVAR 233


>gi|240145510|ref|ZP_04744111.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
          L1-82]
 gi|257202325|gb|EEV00610.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
          L1-82]
 gi|291535999|emb|CBL09111.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
          M50/1]
 gi|291538493|emb|CBL11604.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
          XB6B4]
          Length = 131

 Score = 37.6 bits (87), Expect = 0.51,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 7/41 (17%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           R  +I+ NIAN  T G       Y+R+ + FE V+  + G
Sbjct: 22 MRENVITNNIANIDTPG-------YKRQDVDFESVLQKALG 55


>gi|317182785|dbj|BAJ60569.1| flagellar basal body rod protein FlgB [Helicobacter pylori F57]
          Length = 140

 Score = 37.6 bits (87), Expect = 0.51,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAK--- 49

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---------------------VANASGIVKYPNVNVLV 99
            +  +I  +QS+ V      +P                     +A   G     +V++ +
Sbjct: 50  -KKAEIFENQSSKVLPLAHTNPRHLDFENSAKDGATLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKN 139


>gi|85859203|ref|YP_461405.1| flagellar hook-associated protein 1 [Syntrophus aciditrophicus
          SB]
 gi|85722294|gb|ABC77237.1| flagellar hook-associated protein 1 [Syntrophus aciditrophicus
          SB]
          Length = 463

 Score = 37.6 bits (87), Expect = 0.51,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 11/80 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +I         L+   A + I   NI+N  T G       Y R+   F  V  GS  
Sbjct: 1  MMSIIGILDTTKLALSSFQAAIDITGSNISNVNTPG-------YSRQRPVFSSV--GSID 51

Query: 61 VRVKKI--GVDQSTFVEEFD 78
          VR  KI  GV+ S     ++
Sbjct: 52 VRAAKIKVGVEVSDVERIYN 71


>gi|266621944|ref|ZP_06114879.1| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM
          13479]
 gi|288866378|gb|EFC98676.1| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM
          13479]
          Length = 246

 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 12/68 (17%)

Query: 4  LIASAHIANSG-LAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---FEEVMHGSG 59
          + +  + A SG L  Q A + I + NIAN +T+G       YR K +    F+E +    
Sbjct: 1  MFSGFYTAASGVLMNQRA-LNISANNIANVKTSG-------YRSKRLVKTTFDEQLVRQM 52

Query: 60 GVRVKKIG 67
            +   IG
Sbjct: 53 NGQTTAIG 60



 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            G ++   VN+  E     E  R + +  + +     M      ++ +
Sbjct: 198 QGKLEESGVNLNSEMTRAMEVQRAFQSCSRALTIIDQMNQKSASEIGK 245


>gi|224825161|ref|ZP_03698267.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
 gi|224602832|gb|EEG09009.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
          Length = 136

 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 7/49 (14%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           L +++ R ++I+ NIANA T         Y+   + F   +  + G +
Sbjct: 15 ALNLRAKRAEVIASNIANADTPN-------YKAVDLDFASALQSAQGTQ 56


>gi|157376219|ref|YP_001474819.1| flagellar basal body rod protein FlgB [Shewanella sediminis
          HAW-EB3]
 gi|157318593|gb|ABV37691.1| flagellar basal-body rod protein FlgB [Shewanella sediminis
          HAW-EB3]
          Length = 132

 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 7/40 (17%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          S R Q+IS NIANA T         Y+ + + F++ M  +
Sbjct: 20 SQRAQVISSNIANADTPH-------YKARDLDFDKAMQAA 52


>gi|189426356|ref|YP_001953533.1| flagellar basal-body rod protein FlgB [Geobacter lovleyi SZ]
 gi|189422615|gb|ACD97013.1| flagellar basal-body rod protein FlgB [Geobacter lovleyi SZ]
          Length = 146

 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 45/132 (34%), Gaps = 39/132 (29%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
            +IS NIANA T G TP       K++ FE+ +  +  V+        S F       HP
Sbjct: 26  NLISSNIANAETPGYTP-------KSLEFEQQLQSA--VKKSTTRRGDSQFSGA--TTHP 74

Query: 83  V-----------ANASGIV-----KYPN-----VNVLVETADMRETNRLYMANLQTIKQS 121
                       +   G V     K P      V +  E + M +       N      S
Sbjct: 75  AHIPLRGGGERISQVRGTVVETPAKTPGRDGNSVEMENEMSRMMQ-------NQVLFNAS 127

Query: 122 HDMMTTTLDLLR 133
             +++   + LR
Sbjct: 128 VQLLSKKFEGLR 139


>gi|118474276|ref|YP_891712.1| flagellar basal-body rod protein [Campylobacter fetus subsp.
          fetus 82-40]
 gi|118413502|gb|ABK81922.1| flagellar basal-body rod protein [Campylobacter fetus subsp.
          fetus 82-40]
          Length = 270

 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A   +  Q  R+ +I+ N+AN  T G       Y+R  + 
Sbjct: 8  ATGAMVTQFNRLDVITNNLANVNTIG-------YKRDDVV 40



 Score = 37.2 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 86  ASGIVKYPNVNVLVETADMRETNR 109
           A G  +  NVN ++E  ++ ETNR
Sbjct: 218 AQGYSQISNVNPVIEMVNLVETNR 241


>gi|237653577|ref|YP_002889891.1| flagellar hook-associated protein FlgK [Thauera sp. MZ1T]
 gi|237624824|gb|ACR01514.1| flagellar hook-associated protein FlgK [Thauera sp. MZ1T]
          Length = 660

 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  +I  +GL+   A +   S NIANA T G    +     +   +        G  V
Sbjct: 1  MASLLNIGLTGLSASQAYLNTTSHNIANAATPGFHRQTVTQEARDPQYSGGAFFGTGTGV 60

Query: 64 KKIGVDQSTF 73
            +    S  
Sbjct: 61 TGVARSYSQL 70


>gi|225850286|ref|YP_002730520.1| flagellar basal-body rod protein FlgF [Persephonella marina EX-H1]
 gi|225645268|gb|ACO03454.1| flagellar basal-body rod protein FlgF [Persephonella marina EX-H1]
          Length = 238

 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 17/48 (35%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  N N +    ++    R +      ++    M   + ++ +
Sbjct: 190 KQGFLEQSNTNGIEAMIELINAQRRFEIYGNLMRSLDAMEQKSNEIGK 237


>gi|91776306|ref|YP_546062.1| flagellar basal-body rod protein FlgB [Methylobacillus flagellatus
           KT]
 gi|91710293|gb|ABE50221.1| flagellar basal-body rod protein FlgB [Methylobacillus flagellatus
           KT]
          Length = 131

 Score = 37.6 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 33/146 (22%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI----SFEEVMH 56
           M+ L A+ +   + L V+  R ++++ NIANA T G       Y+ + I    +F++ + 
Sbjct: 1   MNKLDAALNFHQTALRVRGQRQELLAANIANADTPG-------YKARDINFADTFKQALT 53

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANA------------SGIVKYPNVNVLVETADM 104
           G+ G     +  D +       PGH  A A             G V    V++ VE    
Sbjct: 54  GASG----GLKADTT------HPGHIPATASHQNGVLYRSIIQGSVDGNTVDMDVERTQF 103

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLD 130
            +    Y A+   I      + + + 
Sbjct: 104 ADNALRYEASATMISGQIKKLLSAIQ 129


>gi|332533178|ref|ZP_08409047.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas
          haloplanktis ANT/505]
 gi|332037460|gb|EGI73914.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas
          haloplanktis ANT/505]
          Length = 135

 Score = 37.6 bits (87), Expect = 0.53,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           + ++S R ++I+ NIANA T G       Y+ K I F   +  +   +
Sbjct: 15 AMLIRSQRAELIATNIANADTPG-------YKAKDIDFASALKAARSTQ 56


>gi|288940410|ref|YP_003442650.1| flagellar basal-body rod protein FlgF [Allochromatium vinosum DSM
           180]
 gi|288895782|gb|ADC61618.1| flagellar basal-body rod protein FlgF [Allochromatium vinosum DSM
           180]
          Length = 246

 Score = 37.6 bits (87), Expect = 0.53,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 20/35 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           SG+++  NVN +     M E +R +  +++ ++ +
Sbjct: 198 SGMLETSNVNTVASLTRMIELSRAFETHIKMMETA 232


>gi|197122908|ref|YP_002134859.1| flagellar basal body rod protein [Anaeromyxobacter sp. K]
 gi|196172757|gb|ACG73730.1| flagellar basal body rod protein [Anaeromyxobacter sp. K]
          Length = 235

 Score = 37.6 bits (87), Expect = 0.53,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG ++  N   L  +  +    R Y A+LQ I+    +    +++ R
Sbjct: 184 AVRSGELELGNAGALEASIQLVSAQRAYEASLQAIQTYRQLDQRAVEVAR 233


>gi|95929846|ref|ZP_01312587.1| flagellar basal-body rod protein FlgB [Desulfuromonas acetoxidans
           DSM 684]
 gi|95134142|gb|EAT15800.1| flagellar basal-body rod protein FlgB [Desulfuromonas acetoxidans
           DSM 684]
          Length = 136

 Score = 37.6 bits (87), Expect = 0.53,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 35/132 (26%)

Query: 12  NSGLAVQS---------ARMQ---IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
            SG+  Q+          R++   II+ N+ANA+T G       Y+ KT +FE+ +  + 
Sbjct: 3   TSGMMDQTALLMKKSMDLRLRNQQIIAANVANAQTPG-------YQAKTFTFEDALRQAA 55

Query: 60  GVRVKKIGVDQSTFVEEFDPGH------------PVANASGIVKYPNVNVLVETADMRET 107
                  G D +    +    H             + + SG+     V V  E  ++ E 
Sbjct: 56  ----TGKGTDMAVTHPQHISTHGGSINNVTGTVGEIRDTSGMGDRNTVEVDQEMVNLAEN 111

Query: 108 NRLYMANLQTIK 119
             +Y A  Q + 
Sbjct: 112 QIMYEATTQLLN 123


>gi|309779448|ref|ZP_07674209.1| flagellar basal-body rod protein FlgF [Ralstonia sp. 5_7_47FAA]
 gi|308921689|gb|EFP67325.1| flagellar basal-body rod protein FlgF [Ralstonia sp. 5_7_47FAA]
          Length = 245

 Score = 37.6 bits (87), Expect = 0.53,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NVN+     +M E +R     ++++  S     +  +LLR
Sbjct: 198 GALEGSNVNLTDSLVNMIEISRQLEMQMKSLHTSDTNAQSANELLR 243


>gi|317133492|ref|YP_004092806.1| flagellar basal-body rod protein FlgB [Ethanoligenens harbinense
           YUAN-3]
 gi|315471471|gb|ADU28075.1| flagellar basal-body rod protein FlgB [Ethanoligenens harbinense
           YUAN-3]
          Length = 125

 Score = 37.6 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 42/107 (39%), Gaps = 15/107 (14%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
           S       +     R  +IS+N+ANA T G       Y++K++SFE+ +    S G    
Sbjct: 9   SMDAGTKAIDALWQRSNVISDNVANADTPG-------YQQKSVSFEDQLSQAISDGSLSA 61

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                 S  V+        ++++G      V++  +  ++      Y
Sbjct: 62  GELDSVSPQVQVESGTISSSDSNG------VDMETQMVELMRNQLQY 102


>gi|171059411|ref|YP_001791760.1| flagellar basal-body rod protein FlgF [Leptothrix cholodnii SP-6]
 gi|170776856|gb|ACB34995.1| flagellar basal-body rod protein FlgF [Leptothrix cholodnii SP-6]
          Length = 241

 Score = 37.6 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 79  PGHPVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           P  P A    G ++  NV+ +     M    R +   +++++ +         LL
Sbjct: 184 PADPNARLQDGALEGSNVSAIETMVAMISAARQFEQQMKSMQTTEQDEKQAAQLL 238


>gi|149201615|ref|ZP_01878589.1| FlgK flagellar hook-associated protein 1 [Roseovarius sp. TM1035]
 gi|149144663|gb|EDM32692.1| FlgK flagellar hook-associated protein 1 [Roseovarius sp. TM1035]
          Length = 1335

 Score = 37.6 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          ++    I   G+      + +  ENIAN  T G       YRR+    +E
Sbjct: 1  MVDLMDIGRGGVLAYRTALGVTGENIANVDTAG-------YRRRDAVMQE 43


>gi|116250476|ref|YP_766314.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum
          bv. viciae 3841]
 gi|115255124|emb|CAK06198.1| putative flagella associated protein [Rhizobium leguminosarum bv.
          viciae 3841]
          Length = 244

 Score = 37.6 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + +  +++ S       R+  I++N+AN  TTG       +R   + F+E++  +
Sbjct: 1  MQSGLYVSLSSQMALEKRLTTIADNMANVNTTG-------FRATEVKFDEMVAAT 48



 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G ++  NVN + E   + E NR + +    ++ S D     +  L
Sbjct: 194 EQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQTL 240


>gi|303325592|ref|ZP_07356035.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. 3_1_syn3]
 gi|302863508|gb|EFL86439.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. 3_1_syn3]
          Length = 710

 Score = 37.6 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E +++ +    Y A  + I  +  M+ T L L
Sbjct: 670 SGVNMDEEMSNLIKFQHSYTAAAKLITTADQMLQTLLGL 708



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 7/46 (15%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
          L    +I  S L    A + +   N+ANA T G       Y R+ +
Sbjct: 2  LYGLLNIGQSALNASQAWISVTGNNLANADTEG-------YSRQYV 40


>gi|242278491|ref|YP_002990620.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
           DSM 2638]
 gi|242121385|gb|ACS79081.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
           DSM 2638]
          Length = 704

 Score = 37.6 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E +++ +    Y A  + I  +  M+ T L +
Sbjct: 664 SGVNIDEEMSNLIKYQHSYTAAAKLITTADQMLQTLLGM 702


>gi|187926948|ref|YP_001893293.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12J]
 gi|241665277|ref|YP_002983636.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
 gi|187728702|gb|ACD29866.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12J]
 gi|240867304|gb|ACS64964.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
          Length = 645

 Score = 37.6 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +  +I  +GL V    +Q+   NIANA T G       Y R+     E +    GV    
Sbjct: 4  SLLNIGATGLRVADINLQVTGNNIANANTPG-------YSRQEAVQTENIPLYAGVGYLG 56

Query: 66 IGVDQSTFVEEFDP 79
           G + +T    +D 
Sbjct: 57 QGANVTTVKRIYDQ 70


>gi|296135673|ref|YP_003642915.1| fagellar hook-basal body protein [Thiomonas intermedia K12]
 gi|295795795|gb|ADG30585.1| fagellar hook-basal body protein [Thiomonas intermedia K12]
          Length = 414

 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
          +++   A SGL   S  +Q++  NIANA T G
Sbjct: 1  MSTFQTALSGLQAASTDLQVMGNNIANANTVG 32


>gi|209963558|ref|YP_002296473.1| flagellar hook-associated protein 1 FlgK, putative
          [Rhodospirillum centenum SW]
 gi|209957024|gb|ACI97660.1| flagellar hook-associated protein 1 FlgK, putative
          [Rhodospirillum centenum SW]
          Length = 495

 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 9/64 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGVRVK 64
          +   A +GL  Q  +  I+S N+ANA     TPG   Y RK ++   +  G    GV V+
Sbjct: 6  ALQTALTGLQAQQQKSAILSRNVANA----TTPG---YTRKEVTLASLTVGGEGRGVTVQ 58

Query: 65 KIGV 68
           +  
Sbjct: 59 DVRR 62


>gi|313905151|ref|ZP_07838520.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
 gi|313470054|gb|EFR65387.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
          Length = 247

 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++    ++  E  +M E  R +  NL+ ++ S ++   T++ LR
Sbjct: 202 TGALEQSGTDIAKEFTNMIEAQRAFSYNLRMVQTSDEVAQ-TINGLR 247


>gi|167770196|ref|ZP_02442249.1| hypothetical protein ANACOL_01539 [Anaerotruncus colihominis DSM
           17241]
 gi|167667518|gb|EDS11648.1| hypothetical protein ANACOL_01539 [Anaerotruncus colihominis DSM
           17241]
          Length = 254

 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 16/42 (38%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G  +  N++   E A + E  R + A    ++    +   +
Sbjct: 206 QGWTERSNIDPNREMALVMEAQRTFQACSSALQILDKINQKS 247


>gi|163783988|ref|ZP_02178953.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880748|gb|EDP74287.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1]
          Length = 327

 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I S +  N+GL      + +IS+NIAN  T G       ++ +  +FE+++  S
Sbjct: 1  MIQSFYTGNAGLNANQKWLSVISDNIANVNTIG-------FKAERANFEDLIASS 48


>gi|56965597|ref|YP_177331.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
 gi|56911843|dbj|BAD66370.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
          Length = 262

 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 7/37 (18%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  IS N+ANA TTG       ++R++ SF +V+   
Sbjct: 18 IDTISNNMANAETTG-------FKRRSASFADVLTSE 47


>gi|307823531|ref|ZP_07653760.1| fagellar hook-basal body protein [Methylobacter tundripaludum
          SV96]
 gi|307735516|gb|EFO06364.1| fagellar hook-basal body protein [Methylobacter tundripaludum
          SV96]
          Length = 597

 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGGVR 62
          S   A SGL   S  +Q+   NIAN++T G        +D Y   +I          GV+
Sbjct: 2  SFATALSGLQAASTNLQVTGNNIANSQTVGFKESRAEFADVY-ASSIGGVSKTQPGSGVK 60

Query: 63 VKKIGV 68
          V ++  
Sbjct: 61 VTEVAQ 66



 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  +   +    + Y AN QTI     ++ T L 
Sbjct: 559 STVDLSAQLVKLIIAQQAYQANSQTITTEKTLVETILR 596


>gi|217033828|ref|ZP_03439253.1| hypothetical protein HP9810_877g32 [Helicobacter pylori 98-10]
 gi|216943726|gb|EEC23169.1| hypothetical protein HP9810_877g32 [Helicobacter pylori 98-10]
 gi|297380733|gb|ADI35620.1| flagellar basal-body rod protein FlgB [Helicobacter pylori v225d]
 gi|308062842|gb|ADO04730.1| flagellar basal body rod protein FlgB [Helicobacter pylori Cuz20]
          Length = 140

 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAK--- 49

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---------------------VANASGIVKYPNVNVLV 99
            +  +I  +QS+ V      +P                     +A   G     +V++ +
Sbjct: 50  -KKAEIFENQSSKVLPLAHTNPRHLDFENSAKDGASLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKN 139


>gi|94987189|ref|YP_595122.1| flagellar hook-associated protein [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731438|emb|CAJ54801.1| Flagellar hook-associated protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 705

 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E   + +    Y A  + I  +  M+ T L L
Sbjct: 667 VNLDEEMTQLIKFQHSYTAAAKLITTADQMLQTLLSL 703



 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 7/45 (15%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE 52
            I  S +A     + +   NIAN  T         Y R+++ FE
Sbjct: 7  FGIGKSAIAGNQTALNVTGNNIANVNT-------QGYSRQSVRFE 44


>gi|295678057|ref|YP_003606581.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1002]
 gi|295437900|gb|ADG17070.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1002]
          Length = 252

 Score = 37.6 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 1  MDYLI-ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          MD LI  +   +   L  Q+    I++ N+ANA TTG     + YR   +SF
Sbjct: 1  MDRLIYTAMSGSAQALEQQA----IVANNLANASTTGFRAQLETYRAVPMSF 48



 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           DP   +A AS  ++  NVN +     M    R +    Q ++ +     +   +L
Sbjct: 197 DPTVTLAPAS--LEGSNVNPVSAMVSMITNARQFQMQTQLLQNADKNDQSANQIL 249


>gi|218549199|ref|YP_002382990.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
 gi|218356740|emb|CAQ89368.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
 gi|324113868|gb|EGC07842.1| flagellar basal-body rod protein FlgB [Escherichia fergusonii B253]
 gi|325497619|gb|EGC95478.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ECD227]
          Length = 163

 Score = 37.6 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 29/128 (22%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------HGSGGVRVKKI 66
           L  Q    ++++ NIANA T G       Y+ + + F   +        + + GV +   
Sbjct: 43  LRAQRQ--EVLAANIANADTPG-------YQARDLDFASELKKIMVRGRNEAQGVSLTLT 93

Query: 67  GVDQSTFVEEFDPGH------PVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTI- 118
                       PG       P   +  G      V++  E     + +  Y   L  + 
Sbjct: 94  STQHIPAQALTAPGAELLYRVPDQPSLDGN----TVDMDRERTQFADNSLRYQMGLTVLG 149

Query: 119 KQSHDMMT 126
            Q   MM 
Sbjct: 150 GQIKSMMN 157


>gi|254511077|ref|ZP_05123144.1| flagellar basal-body rod protein FlgF [Rhodobacteraceae bacterium
          KLH11]
 gi|221534788|gb|EEE37776.1| flagellar basal-body rod protein FlgF [Rhodobacteraceae bacterium
          KLH11]
          Length = 236

 Score = 37.6 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 7/32 (21%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M++++ NIANA TTG       YR++ + F E
Sbjct: 18 MRMVANNIANANTTG-------YRQQGVVFSE 42


>gi|239817151|ref|YP_002946061.1| flagellar hook-associated protein FlgK [Variovorax paradoxus S110]
 gi|239803728|gb|ACS20795.1| flagellar hook-associated protein FlgK [Variovorax paradoxus S110]
          Length = 652

 Score = 37.6 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   ETA++    ++Y AN + I+ +  M    L +
Sbjct: 612 SGVNQDEETANLLMYQQMYQANAKVIQTASTMFDAILGI 650


>gi|168334477|ref|ZP_02692648.1| Flagellar basal body protein [Epulopiscium sp. 'N.t. morphotype B']
          Length = 120

 Score = 37.6 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 16/104 (15%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           +  +  I    L     R Q ++ NIAN  T G       Y+R  + F  ++       G
Sbjct: 1   MFENIDITKKALDASMLRYQHLTNNIANIDTVG-------YKRTDVEFGSILARELQMNG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
            +   I +++      +D         G     N+++  E + +
Sbjct: 54  RK--NIDLNRIQPRVYYDNAGARTRLDGN----NIDIDKEMSQL 91


>gi|150388562|ref|YP_001318611.1| flagellar hook-associated protein FlgK [Alkaliphilus
          metalliredigens QYMF]
 gi|149948424|gb|ABR46952.1| flagellar hook-associated protein FlgK [Alkaliphilus
          metalliredigens QYMF]
          Length = 493

 Score = 37.6 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          M    +  + A SG+      + ++  NIANA T G +
Sbjct: 1  MRSTFSGFNTATSGIFASQRSLDVVGHNIANANTPGYS 38


>gi|332525069|ref|ZP_08401249.1| flagellar basal body protein [Rubrivivax benzoatilyticus JA2]
 gi|332108358|gb|EGJ09582.1| flagellar basal body protein [Rubrivivax benzoatilyticus JA2]
          Length = 150

 Score = 37.6 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ L          LA++S R ++I+ NIANA T G       Y  +   F + +  +
Sbjct: 2  INRLTGQLDFQAQALALRSERQRVIASNIANADTPG-------YVARDFDFSQALREA 52


>gi|328543140|ref|YP_004303249.1| flagellar hook-associated protein FlgK [polymorphum gilvum
           SL003B-26A1]
 gi|326412886|gb|ADZ69949.1| Flagellar hook-associated protein FlgK [Polymorphum gilvum
           SL003B-26A1]
          Length = 617

 Score = 37.6 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V+V  E A + E    Y AN + ++ + +M    L+
Sbjct: 580 VDVDAELAFLIELQNAYAANARVMQAAKEMFDVLLN 615


>gi|322832561|ref|YP_004212588.1| flagellar basal-body rod protein FlgB [Rahnella sp. Y9602]
 gi|321167762|gb|ADW73461.1| flagellar basal-body rod protein FlgB [Rahnella sp. Y9602]
          Length = 136

 Score = 37.6 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKKIGVD-- 69
           L  Q    +I+S NIANA T G       Y+ + I F   +      G      I +   
Sbjct: 18  LRAQRQ--EILSANIANADTPG-------YQARDIDFASQLQKVMEQGRASGSGISLSLT 68

Query: 70  -----------QSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                       +     +  P  P A+ +       V++  E  +  + +  Y  +L  
Sbjct: 69  SDRHIPASNVQPADMDLMYRIPDQPSADGN------TVDMDRERTNFADNSVRYQTDLTV 122

Query: 118 I-KQSHDMMT 126
           +  Q   MM+
Sbjct: 123 LGGQIKGMMS 132


>gi|209963564|ref|YP_002296479.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum
          SW]
 gi|209957030|gb|ACI97666.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum
          SW]
          Length = 248

 Score = 37.6 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 8/66 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVR 62
          +  S ++A S        + + + N+AN  T         +R +   F+  +  +G G +
Sbjct: 1  MENSLYVALSQQMAVRRMLDVTANNVANMNTAA-------FRAERPVFDAFVEKAGKGQK 53

Query: 63 VKKIGV 68
          V  +  
Sbjct: 54 VAFVID 59



 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 1/29 (3%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLY-MAN 114
            G V+  NV  + E   + E  R Y  AN
Sbjct: 198 QGAVEGSNVQPITEMVRLVELTRAYGQAN 226


>gi|209521590|ref|ZP_03270288.1| flagellar basal-body rod protein FlgF [Burkholderia sp. H160]
 gi|209497973|gb|EDZ98130.1| flagellar basal-body rod protein FlgF [Burkholderia sp. H160]
          Length = 252

 Score = 37.6 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 1  MDYLI-ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          MD LI  +   +   L  Q+    I++ N+ANA TTG     + YR   +SF
Sbjct: 1  MDRLIYTAMSGSAQALEQQA----IVANNLANASTTGFRAQLETYRAVPMSF 48



 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           DP   +A AS  ++  NVN +     M    R +    Q ++ +     +   LL
Sbjct: 197 DPTVTLAPAS--LEGSNVNPVNAMVSMITNARQFQMQTQLLENADKNDQSANQLL 249


>gi|149178721|ref|ZP_01857304.1| flagellar hook protein FlgE [Planctomyces maris DSM 8797]
 gi|148842419|gb|EDL56799.1| flagellar hook protein FlgE [Planctomyces maris DSM 8797]
          Length = 563

 Score = 37.6 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 19/47 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  N +V     D+   +  Y  N + I     ++   L L R
Sbjct: 517 AGSIELSNTDVGRSLVDLIVASTNYRGNARVISSVQQLVDELLVLGR 563


>gi|34557981|ref|NP_907796.1| flagellar basal body rod protein FlgB [Wolinella succinogenes DSM
          1740]
 gi|34483699|emb|CAE10696.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGB PROXIMAL ROD PROTEIN
          [Wolinella succinogenes]
          Length = 145

 Score = 37.6 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 7/41 (17%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S R  +IS NIAN  T         YR + I+FEEV+    
Sbjct: 23 SLRQDLISSNIANVDTPM-------YRPRDINFEEVLTSES 56


>gi|309779453|ref|ZP_07674214.1| flagellar hook-associated protein FlgK [Ralstonia sp. 5_7_47FAA]
 gi|308921694|gb|EFP67330.1| flagellar hook-associated protein FlgK [Ralstonia sp. 5_7_47FAA]
          Length = 645

 Score = 37.6 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +  +I  SGL V    +Q+   NIANA     TPG   Y R+     E +    GV    
Sbjct: 4  SLLNIGASGLRVADINLQVTGNNIANA----STPG---YSRQEAVQTENIPLYAGVGYLG 56

Query: 66 IGVDQSTFVEEFDP 79
           G + +T    +D 
Sbjct: 57 QGANVTTVKRIYDQ 70


>gi|326202857|ref|ZP_08192724.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens
          DSM 2782]
 gi|325986934|gb|EGD47763.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens
          DSM 2782]
          Length = 544

 Score = 37.6 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 21/87 (24%)

Query: 1  MDYLIASAHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-----EV 54
          M       +IA SGL   Q   +  +  N++NA     TPG   Y R+           V
Sbjct: 1  MQQSFFGLNIALSGLYTAQRN-LDTVGHNLSNA----TTPG---YSRQQTIQSASNPLAV 52

Query: 55 MHGSGGV-------RVKKIGVDQSTFV 74
          + G+G V        V++I      F 
Sbjct: 53 LDGTGMVGTGSQATGVQRIRDSYLDFK 79


>gi|15644116|ref|NP_229165.1| flagellar basal-body rod protein FlgB [Thermotoga maritima MSB8]
 gi|148270548|ref|YP_001245008.1| flagellar basal-body rod protein FlgB [Thermotoga petrophila
          RKU-1]
 gi|4981924|gb|AAD36434.1|AE001790_6 flagellar basal-body rod protein FlgB [Thermotoga maritima MSB8]
 gi|147736092|gb|ABQ47432.1| flagellar basal-body rod protein FlgB [Thermotoga petrophila
          RKU-1]
          Length = 127

 Score = 37.6 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           + V   R  + S NIAN      TPG   Y+RK ++FEE++  S
Sbjct: 12 AMDVALLRQNVHSLNIANV----STPG---YKRKYVAFEELLKES 49


>gi|255654320|ref|ZP_05399729.1| putative flagellar hook-associated protein [Clostridium difficile
           QCD-23m63]
          Length = 315

 Score = 37.6 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 16/33 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             V++  E  ++ +  R Y A+ + +  +  ++
Sbjct: 275 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLL 307


>gi|157147101|ref|YP_001454420.1| flagellar basal body rod protein FlgF [Citrobacter koseri ATCC
           BAA-895]
 gi|157084306|gb|ABV13984.1| hypothetical protein CKO_02878 [Citrobacter koseri ATCC BAA-895]
          Length = 243

 Score = 37.6 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ASG ++  NV+ + E       NR + A ++ +K + D+  +   L+R
Sbjct: 194 ASGHLETANVSAINEMVASIALNRQFEAQIKMMKAAEDLANSGNRLIR 241


>gi|167645397|ref|YP_001683060.1| flagellar basal body rod protein [Caulobacter sp. K31]
 gi|167347827|gb|ABZ70562.1| flagellar basal body rod protein [Caulobacter sp. K31]
          Length = 245

 Score = 37.6 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 25/53 (47%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            P    A   G+++  NV  + +   + E NR Y +  + + Q+ ++  + ++
Sbjct: 187 QPATNAAIHQGMLEASNVESIKQITKLIEVNRAYESVAKMMDQTTELSRSAVE 239



 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)

Query: 14 GLAVQ---SARMQIISENIANARTTG 36
          GL+ Q      + I++ NIANA TTG
Sbjct: 8  GLSRQMTLRRELDIVANNIANANTTG 33


>gi|260437431|ref|ZP_05791247.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus
          DSM 2876]
 gi|292810063|gb|EFF69268.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus
          DSM 2876]
          Length = 579

 Score = 37.6 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 7/46 (15%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          +A  ++  SGL   S  +   + N+AN  T+G       Y R+ + 
Sbjct: 3  MAGLYVGLSGLQTSSNSLNTTANNLANVNTSG-------YVRQQVV 41


>gi|237757071|ref|ZP_04585515.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237690770|gb|EEP59934.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 475

 Score = 37.6 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 21/39 (53%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN+  E  ++ +  R Y A  + I  + ++M T L++ +
Sbjct: 437 VNMDEELINLTKLQRSYQAAARIITVTDELMQTILNIGK 475


>gi|212640402|ref|YP_002316922.1| flagellar hook-associated protein FlgK [Anoxybacillus
          flavithermus WK1]
 gi|212561882|gb|ACJ34937.1| Flagellar hook-associated protein [Anoxybacillus flavithermus
          WK1]
          Length = 513

 Score = 37.6 bits (87), Expect = 0.60,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 7/42 (16%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          G+  Q   + +   NIANA T G       Y R+ ++FE+  
Sbjct: 14 GMTAQQQALYVTGHNIANANTPG-------YSRQRVNFEQTP 48


>gi|37525842|ref|NP_929186.1| flagellar basal-body rod protein FlgF (putative proximal rod
           protein) [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|36785271|emb|CAE14212.1| Flagellar basal-body rod protein FlgF (Putative proximal rod
           protein) [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 251

 Score = 37.6 bits (87), Expect = 0.60,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +     M    R +   ++ I  S +       LL
Sbjct: 204 GVLEGSNVNPMESMVSMIANARRFEMQMKVIHSSDENAQRANQLL 248


>gi|317179250|dbj|BAJ57038.1| flagellar basal-body rod protein [Helicobacter pylori F30]
          Length = 269

 Score = 37.6 bits (87), Expect = 0.60,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 11 ANSGLAVQSARMQIISENIANART 34
          A   +A Q  R+ +IS N+AN  T
Sbjct: 8  ATGAMAAQFNRLDLISNNLANLNT 31


>gi|326204629|ref|ZP_08194485.1| flagellar basal-body rod protein FlgB [Clostridium papyrosolvens
          DSM 2782]
 gi|325985196|gb|EGD46036.1| flagellar basal-body rod protein FlgB [Clostridium papyrosolvens
          DSM 2782]
          Length = 137

 Score = 37.6 bits (87), Expect = 0.60,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 7/44 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L    AR ++IS+N+AN  T         Y+RK ++FEE ++ S
Sbjct: 16 LNASWARNEVISQNLANVDTPN-------YKRKDVTFEEYLNDS 52


>gi|227112518|ref|ZP_03826174.1| flagellar basal body rod protein FlgB [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
 gi|227328335|ref|ZP_03832359.1| flagellar basal body rod protein FlgB [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 138

 Score = 37.6 bits (87), Expect = 0.60,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 21/124 (16%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQSTF 73
           L  Q    +I++ NIANA T G       Y+ + I F   +  +    RV   G+   T 
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFASQLSKTMEQGRVNGTGIALKTT 68

Query: 74  VEEFDPGHPVANA--SGIVKYPN--------VNVLVETADMRETNRLYMANLQTI-KQSH 122
                P           + + P+        V++  E  +  + +  Y ++L  +  Q  
Sbjct: 69  SVRHIPAQNFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKYQSSLTVLGGQIK 128

Query: 123 DMMT 126
            MM+
Sbjct: 129 GMMS 132


>gi|239826610|ref|YP_002949234.1| flagellar basal body rod protein FlgB [Geobacillus sp. WCH70]
 gi|239806903|gb|ACS23968.1| flagellar basal-body rod protein FlgB [Geobacillus sp. WCH70]
          Length = 130

 Score = 37.6 bits (87), Expect = 0.60,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 19/114 (16%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRVKKIGVDQST 72
           GL   S R ++I+ NIAN  T         Y+ K + F   +  +   +  K+       
Sbjct: 14  GLDYASLREKVIANNIANVDTPN-------YKAKEVRFRAELDRALQPLEAKRTNPKHLP 66

Query: 73  FVE-------EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           F              + V N +G     NV++  E + + E    Y A ++ + 
Sbjct: 67  FTRPMTNKFLVTSRTNVVYNHNGN----NVDIDQEMSYLAENQIYYNALVEQLN 116


>gi|296123915|ref|YP_003631693.1| flagellar basal body FlaE domain protein [Planctomyces limnophilus
           DSM 3776]
 gi|296016255|gb|ADG69494.1| flagellar basal body FlaE domain protein [Planctomyces limnophilus
           DSM 3776]
          Length = 562

 Score = 37.6 bits (87), Expect = 0.61,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ASG ++  N ++     D+   +  Y  N + I    D+    L L R
Sbjct: 515 ASGKIELSNTDIGRNLVDLIVASTNYRGNARVISSVQDLTNELLLLGR 562



 Score = 33.7 bits (77), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 7/52 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          L ++ + + +GL++    + ++  NIANA T G       ++  T+ F+  +
Sbjct: 3  LTSALNTSLNGLSLNEVTIDVLGNNIANAGTNG-------FKASTVRFQTQL 47


>gi|330818578|ref|YP_004362283.1| flagellar hook-associated protein FlgK [Burkholderia gladioli BSR3]
 gi|327370971|gb|AEA62327.1| flagellar hook-associated protein FlgK [Burkholderia gladioli BSR3]
          Length = 661

 Score = 37.6 bits (87), Expect = 0.61,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E  ++ +  ++Y AN + I+ +  + +T L +
Sbjct: 621 SGVNQNEEAVNLMQYQQMYQANAKVIQTASTLFSTLLGI 659


>gi|312126816|ref|YP_003991690.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
          hydrothermalis 108]
 gi|311776835|gb|ADQ06321.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          hydrothermalis 108]
          Length = 132

 Score = 37.6 bits (87), Expect = 0.61,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 7/39 (17%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           R +IIS NIANA T G       Y+ K ++FE  +  S
Sbjct: 20 KRNEIISNNIANADTPG-------YKAKDLNFEAYLQRS 51


>gi|239628978|ref|ZP_04672009.1| conserved hypothetical protein [Clostridiales bacterium
          1_7_47_FAA]
 gi|239519124|gb|EEQ58990.1| conserved hypothetical protein [Clostridiales bacterium
          1_7_47FAA]
          Length = 246

 Score = 37.6 bits (87), Expect = 0.61,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 7/47 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          + +  + A SG+ +    + + + NIAN +T+G       Y+ K + 
Sbjct: 1  MFSGFYTAASGMLMNQRSLDMAANNIANVKTSG-------YKPKRLV 40



 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++   VN+  E     E  R + +  + +     M   T  ++ +
Sbjct: 198 QGKLEQSGVNLNNEMTRAMEVQRAFQSCGKALTIIDQMNQKTANEIGK 245


>gi|212709493|ref|ZP_03317621.1| hypothetical protein PROVALCAL_00535 [Providencia alcalifaciens DSM
           30120]
 gi|212687831|gb|EEB47359.1| hypothetical protein PROVALCAL_00535 [Providencia alcalifaciens DSM
           30120]
          Length = 251

 Score = 37.6 bits (87), Expect = 0.61,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN       M    R +   ++ I+ + +       LL
Sbjct: 203 SGVIEGSNVNAAEAMVSMIANARHFEMQMKVIRSADENAQRANQLL 248


>gi|207091984|ref|ZP_03239771.1| flagellar basal body rod protein FlgB [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 140

 Score = 37.6 bits (87), Expect = 0.61,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAE--- 49

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---------------------VANASGIVKYPNVNVLV 99
            +  +I  +QS+ V      +P                     +A   G     +V++ +
Sbjct: 50  -KKAEIFENQSSKVLPLAHTNPRHLDFENSVKDGASLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKN 139


>gi|24374761|ref|NP_718804.1| flagellar basal body rod protein FlgB [Shewanella oneidensis
          MR-1]
 gi|24349427|gb|AAN56248.1|AE015762_5 flagellar basal-body rod protein FlgB [Shewanella oneidensis
          MR-1]
          Length = 134

 Score = 37.6 bits (87), Expect = 0.61,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 7/38 (18%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          S R ++++ NIANA T         Y+ + + F   ++
Sbjct: 20 SERAEVLASNIANADTPH-------YKARDVDFSAALN 50


>gi|330961197|gb|EGH61457.1| flagellar hook protein FlgE [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 582

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           SG ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 537 SGGLEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580



 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 17/87 (19%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------- 59
          S + A SG+   + R+++   NIAN  T G       ++     F  +   +        
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANVGTLG-------FKSSRAQFSALYASAQLGAGGNA 54

Query: 60 ---GVRVKKIGVDQSTFVEEFDPGHPV 83
             GVR+  +  + +        G+P+
Sbjct: 55 VGDGVRLASVQQNFNQGETVISSGNPL 81


>gi|304316911|ref|YP_003852056.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778413|gb|ADL68972.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 136

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
             +  + +  L     R ++IS NIAN  T G       ++R  ++FE +++        
Sbjct: 6   FNTVDLMSKALDASELRDEVISNNIANVDTPG-------FKRSDVNFESILNDAINSNKL 58

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGI-VKYPNVNVLVETADM 104
           +G V  K      ST ++  +P     N++ + +   NV++ VE +++
Sbjct: 59  AGFVTDKNHIPINSTSIDNIEPQIVQDNSTSMRLDGNNVDIDVEMSNL 106


>gi|261341488|ref|ZP_05969346.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus
          ATCC 35316]
 gi|288316284|gb|EFC55222.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus
          ATCC 35316]
          Length = 456

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-------MHG 57
          +   +IA SGL      M + S NI+NA T G       Y R+ I    V       M  
Sbjct: 1  MNMINIAWSGLQAAQFGMSVTSMNISNALTPG-------YSRQGIIQSSVVTMGQGGMSA 53

Query: 58 SGGVRVKKIGV 68
            GV+V+ I  
Sbjct: 54 GAGVQVESIRR 64


>gi|188995967|ref|YP_001930218.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931034|gb|ACD65664.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 475

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 21/39 (53%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN+  E  ++ +  R Y A  + I  + ++M T L++ +
Sbjct: 437 VNMDEELINLTKLQRSYQAAARIITVTDELMQTILNIGK 475


>gi|251797448|ref|YP_003012179.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. JDR-2]
 gi|247545074|gb|ACT02093.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. JDR-2]
          Length = 132

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 46/132 (34%), Gaps = 28/132 (21%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            L     R  +++ NIAN  T         ++R  + FEE++    G +    G   +  
Sbjct: 12  ALKASELRQGVVANNIANVDTPN-------FKRSEVLFEELLSQEMGGQTALQGKRTNER 64

Query: 74  VEEFDPGHPVANASGIVKYP---------------NVNVLVETADMRETNRLYMANLQTI 118
                   P+   SGIV                  NV++  E + + +    Y   +Q I
Sbjct: 65  HI------PIGRTSGIVPTAQIQTDNLSEMNNNENNVDIDREMSLLAKNQLSYNFYIQQI 118

Query: 119 KQSHDMMTTTLD 130
                MM T ++
Sbjct: 119 NHDVKMMKTAIE 130


>gi|186477698|ref|YP_001859168.1| flagellar basal body rod protein FlgF [Burkholderia phymatum
           STM815]
 gi|184194157|gb|ACC72122.1| flagellar basal-body rod protein FlgF [Burkholderia phymatum
           STM815]
          Length = 252

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 6/59 (10%)

Query: 80  GHP-VAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+P  A+     A+G ++  NVN +     M    R +    + I+ +     +   LL
Sbjct: 191 GNPADADPAVVVAAGALEGSNVNPVSAMVSMITNARQFQMQTKMIESADQNEQSANKLL 249


>gi|322432976|ref|YP_004210225.1| flagellar basal-body rod protein FlgF [Acidobacterium sp.
          MP5ACTX9]
 gi|321165203|gb|ADW70907.1| flagellar basal-body rod protein FlgF [Acidobacterium sp.
          MP5ACTX9]
          Length = 246

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 10/59 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          MD   +  + A + L  ++  +  I+ N+AN  +TG       +R +  +F  V+ GSG
Sbjct: 1  MD---SGLYAACTALMARTDALDTIANNLAN-SSTGG------FRARHTTFSSVLAGSG 49


>gi|126738558|ref|ZP_01754263.1| flagellar hook-associated protein K [Roseobacter sp. SK209-2-6]
 gi|126720357|gb|EBA17063.1| flagellar hook-associated protein K [Roseobacter sp. SK209-2-6]
          Length = 484

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+   E  ++    R Y AN + ++   +MM T L +
Sbjct: 448 VDSDAELQNLMIIERAYAANAKMLEAVDEMMQTLLRI 484



 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++ + A SGL   +   Q++SEN+ANA T G       Y  + ++     + +GG +V
Sbjct: 3  ITSAINSAMSGLTANARSSQVVSENLANALTPG-------YSAQRLNLSTNSY-TGGTKV 54

Query: 64 KKIGV 68
            +  
Sbjct: 55 DGVER 59


>gi|83814873|ref|YP_446719.1| flagella basal body rod protein [Salinibacter ruber DSM 13855]
 gi|83756267|gb|ABC44380.1| Flagella basal body rod protein [Salinibacter ruber DSM 13855]
          Length = 137

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 17/73 (23%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----------SGGVRV 63
            ++  + R +  S N+AN  T G       Y R ++SFEE +               V  
Sbjct: 37  AMSAYAQRRRAASSNLANIDTPG-------YDRMSVSFEEELQDVRRHSGSLREQSEVEP 89

Query: 64  KKIGVDQSTFVEE 76
                D++  +EE
Sbjct: 90  DTEVEDEAPVLEE 102


>gi|150019083|ref|YP_001311337.1| flagellar basal body rod protein FlgB [Clostridium beijerinckii
          NCIMB 8052]
 gi|149905548|gb|ABR36381.1| flagellar basal-body rod protein FlgB [Clostridium beijerinckii
          NCIMB 8052]
          Length = 134

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 7/46 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          G+   + R + I+ N+AN  T         Y+R  + FEE +   G
Sbjct: 18 GIKASNVRAKTIANNMANVNT-------KDYKRFNVVFEENLKNQG 56


>gi|150390490|ref|YP_001320539.1| flagellar basal-body rod protein FlgB [Alkaliphilus
          metalliredigens QYMF]
 gi|149950352|gb|ABR48880.1| flagellar basal-body rod protein FlgB [Alkaliphilus
          metalliredigens QYMF]
          Length = 136

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L ++ ++ NS ++    R + IS NIANA T         +++ T+ FE  +  +
Sbjct: 5  LYSNINLLNSAMSASWVRNEAISNNIANANTPN-------FKKSTVEFETHLKNA 52


>gi|302874576|ref|YP_003843209.1| flagellar hook-associated protein FlgK [Clostridium cellulovorans
          743B]
 gi|307690813|ref|ZP_07633259.1| flagellar hook-associated protein FlgK [Clostridium cellulovorans
          743B]
 gi|302577433|gb|ADL51445.1| flagellar hook-associated protein FlgK [Clostridium cellulovorans
          743B]
          Length = 579

 Score = 37.6 bits (87), Expect = 0.63,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 21/87 (24%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI----------- 49
          M  ++++ + AN G+  Q   +   S NIANA T G       Y R+ +           
Sbjct: 1  MPSILSTLNTANKGINAQQTAISTTSHNIANANTEG-------YSRQRVNLVTSRPFSSP 53

Query: 50 SFEEVMHGSG---GVRVKKIGVDQSTF 73
          SF           GV V  I   ++TF
Sbjct: 54 SFNSAAGPGQIGTGVDVASIERIRNTF 80


>gi|254474364|ref|ZP_05087750.1| flagellar basal-body rod protein FlgF [Ruegeria sp. R11]
 gi|214028607|gb|EEB69442.1| flagellar basal-body rod protein FlgF [Ruegeria sp. R11]
          Length = 239

 Score = 37.6 bits (87), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 7/39 (17%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M++++ NIANA TTG       YR + + F E +  + G
Sbjct: 19 MRVVANNIANAATTG-------YRSEGLIFSEFIQSAPG 50



 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 15/37 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            G ++  NVN + E A M E  R Y      ++    
Sbjct: 190 QGFLEGSNVNAISEVARMVEIQRAYEMGQSFLETEDQ 226


>gi|323490137|ref|ZP_08095357.1| flagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
 gi|323396185|gb|EGA89011.1| flagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
          Length = 280

 Score = 37.6 bits (87), Expect = 0.63,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 20/37 (54%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            ++  NV++  E  ++  T RL+ +  + I  + DMM
Sbjct: 236 FLEMSNVDLSDEMTELITTQRLFQSQGRAISYADDMM 272



 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 7/48 (14%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
           + A++ ++    ++ +I  NIAN  T G       Y+R+  SF + +
Sbjct: 5  MNTASNTMSELQKKLDLIGNNIANVNTNG-------YKRQEASFSDAL 45


>gi|261821150|ref|YP_003259256.1| flagellar basal body rod protein FlgB [Pectobacterium wasabiae
           WPP163]
 gi|261605163|gb|ACX87649.1| flagellar basal-body rod protein FlgB [Pectobacterium wasabiae
           WPP163]
          Length = 138

 Score = 37.6 bits (87), Expect = 0.63,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 21/124 (16%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQSTF 73
           L  Q    +I++ NIANA T G       Y+ + I F   +  +    RV   G+   T 
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFASQLSKTMEQGRVNGTGIALKTT 68

Query: 74  VEEFDPGHPVANA--SGIVKYPN--------VNVLVETADMRETNRLYMANLQTI-KQSH 122
                P           + + P+        V++  E  +  + +  Y  +L  +  Q  
Sbjct: 69  SVRHIPAQNFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKYQTSLTVLGGQIR 128

Query: 123 DMMT 126
            MM+
Sbjct: 129 GMMS 132


>gi|89067518|ref|ZP_01155031.1| flagellar hook-associated protein [Oceanicola granulosus
          HTCC2516]
 gi|89047087|gb|EAR53141.1| flagellar hook-associated protein [Oceanicola granulosus
          HTCC2516]
          Length = 478

 Score = 37.6 bits (87), Expect = 0.63,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 9/63 (14%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           S   A SGL V S R +I+S NIANA T G       Y R++++    M   GGVR   
Sbjct: 5  TSIGSALSGLEVASRRAEIVSGNIANALTEG-------YGRRSLAVSSTM--LGGVRADG 55

Query: 66 IGV 68
          +  
Sbjct: 56 VIR 58


>gi|312876493|ref|ZP_07736476.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          lactoaceticus 6A]
 gi|311796704|gb|EFR13050.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          lactoaceticus 6A]
          Length = 133

 Score = 37.6 bits (87), Expect = 0.65,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 7/39 (17%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           R +IIS NIANA T G       Y+ K + FE  +  S
Sbjct: 20 KRNEIISNNIANADTPG-------YKAKDLDFEAFLQKS 51


>gi|311694358|gb|ADP97231.1| fFlagellar basal-body rod protein FlgB [marine bacterium HP15]
          Length = 139

 Score = 37.6 bits (87), Expect = 0.65,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 25/136 (18%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG----- 60
           ++  I    +  +  R ++++ N+ANA T G       ++ + + F+ +M  +       
Sbjct: 14  SALGIHQHAVEARVKRAEVLANNLANADTPG-------FKARDLDFQAMMQKAQEQVSGF 66

Query: 61  --VRVKKIGVDQSTFVEEFD-----PGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
              +     +D S    E D     P  P  + +       V+   E          + A
Sbjct: 67  QMAKTHDAHMDTSPSASESDLMYRVPHQPSVDGN------TVDAQQEQTRFMRNAMDFQA 120

Query: 114 NLQTIKQSHDMMTTTL 129
           + Q +      +T  L
Sbjct: 121 SFQFLNSKFSGLTKAL 136


>gi|307638244|gb|ADN80694.1| Flagellar basal-body rod protein [Helicobacter pylori 908]
 gi|325996837|gb|ADZ52242.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
 gi|325998429|gb|ADZ50637.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
          Length = 140

 Score = 37.6 bits (87), Expect = 0.65,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAE--- 49

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---------------------VANASGIVKYPNVNVLV 99
            +  +I  +QS+ V      +P                     +A   G     +V++ +
Sbjct: 50  -KKAEIFENQSSKVLPLAHTNPRHLDFENSAKEGASLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKN 139


>gi|315585966|gb|ADU40347.1| flagellar basal-body rod protein FlgB [Helicobacter pylori 35A]
 gi|317178282|dbj|BAJ56071.1| flagellar basal body rod protein FlgB [Helicobacter pylori F16]
          Length = 140

 Score = 37.6 bits (87), Expect = 0.65,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAK--- 49

Query: 61  VRVKKIGVDQST---FVEEFDPGHPV------------------ANASGIVKYPNVNVLV 99
            +  +I  +QS+    +   +P H                    A   G     +V++ +
Sbjct: 50  -KKAEIFENQSSKILPLAHTNPRHLDFENSAKDGASLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKN 139


>gi|120598229|ref|YP_962803.1| flagellar basal body rod protein FlgB [Shewanella sp. W3-18-1]
 gi|120558322|gb|ABM24249.1| flagellar basal-body rod protein FlgB [Shewanella sp. W3-18-1]
          Length = 134

 Score = 37.6 bits (87), Expect = 0.65,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 25/129 (19%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           G+  + A  ++IS NIANA T         Y+ + + F   M  +   + ++  +D    
Sbjct: 17  GIRAERA--EVISSNIANADTPH-------YKARDVDFSAAMQAARSQQQQRNHLDMGDN 67

Query: 74  VEEFDPGHPVANASG-IVKY--PN---------VNVLVETADMRETNRLYMANLQTIKQS 121
              F     +A  +G  VK+  PN         V++  E +   +    Y  +L  +   
Sbjct: 68  ERHFG----LAELTGQYVKFRVPNQPDTGDGNTVDIQQEQSAFMQNALEYQMSLGFLDSK 123

Query: 122 HDMMTTTLD 130
              M   L 
Sbjct: 124 FSGMKKALR 132


>gi|237799207|ref|ZP_04587668.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|237806226|ref|ZP_04592930.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331022062|gb|EGI02119.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331027339|gb|EGI07394.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 582

 Score = 37.6 bits (87), Expect = 0.65,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           SG ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 537 SGGLEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580



 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 17/70 (24%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------- 59
          S + A SG+   + R+++   NIAN  T G       ++     F  +   +        
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANVGTLG-------FKSSRAQFSALYSSAQLGNGNNA 54

Query: 60 ---GVRVKKI 66
             GVR+  +
Sbjct: 55 VGDGVRLAAV 64


>gi|254464939|ref|ZP_05078350.1| flagellar hook-associated protein FlgK [Rhodobacterales bacterium
          Y4I]
 gi|206685847|gb|EDZ46329.1| flagellar hook-associated protein FlgK [Rhodobacterales bacterium
          Y4I]
          Length = 482

 Score = 37.6 bits (87), Expect = 0.65,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++ + A +GL+      Q+++EN+ANA T G       Y R+ +       G  GVR+
Sbjct: 3  IYSALNSAMTGLSAAGRSSQVVAENLANALTPG-------YTRRVLDLNSPGAGVPGVRI 55

Query: 64 KKIGVDQST 72
            +      
Sbjct: 56 GDVQRLNDP 64


>gi|148258439|ref|YP_001243024.1| putative flagellar hook-associated protein [Bradyrhizobium sp.
          BTAi1]
 gi|146410612|gb|ABQ39118.1| putative flagellar hook-associated protein [Bradyrhizobium sp.
          BTAi1]
          Length = 599

 Score = 37.6 bits (87), Expect = 0.65,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  + + A +GL      +  +S+N+AN+   G       Y R+ +S E    G+ GV V
Sbjct: 2  LTNAFNTATAGLQTLQVAIGTVSQNVANSGVAG-------YTRRVVSTESAGPGNSGVAV 54

Query: 64 KKIGV 68
           +I  
Sbjct: 55 ARIDR 59



 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 16/36 (44%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           VN+  E + +      Y AN + +  + +M+   L 
Sbjct: 563 VNIDEEMSRLIALQTAYAANARVLTAAREMIDLLLR 598


>gi|224436692|ref|ZP_03657696.1| flagellar hook-associated protein FlgK [Helicobacter cinaedi CCUG
          18818]
 gi|313143190|ref|ZP_07805383.1| flagellar hook-protein FlgK [Helicobacter cinaedi CCUG 18818]
 gi|313128221|gb|EFR45838.1| flagellar hook-protein FlgK [Helicobacter cinaedi CCUG 18818]
          Length = 606

 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 16/82 (19%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS--------FE 52
          M  +++S + + +GL      + +   NI+NA         + Y R+ +         F+
Sbjct: 1  MGGILSSLNTSYTGLQAHQLMVDVTGNNISNAS-------DEFYSRQRVLVRPEKPLYFQ 53

Query: 53 EVMHGSGGVRVKKIGVDQSTFV 74
          +   G  GV V+ I      FV
Sbjct: 54 DYNLGR-GVSVETIQRIHDEFV 74



 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSLDEEMVNLIKFQGGYAANAKVITTIDRMIETLLGI 604


>gi|32266589|ref|NP_860621.1| flagellar distal rod protein FlgG [Helicobacter hepaticus ATCC
          51449]
 gi|32262640|gb|AAP77687.1| flagellar distal rod protein FlgG [Helicobacter hepaticus ATCC
          51449]
          Length = 277

 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 7/37 (18%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          G+  Q  R+ +IS N+AN  TTG       ++R  + 
Sbjct: 11 GMVTQFNRLDLISNNLANLNTTG-------FKRDDVV 40



 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 86  ASGIVKYPNVNVLVETADMRETNR 109
           A G ++  NVN + E   + ETNR
Sbjct: 226 AQGFLEKSNVNAVQEMTSLIETNR 249


>gi|322435945|ref|YP_004218157.1| flagellar hook-associated protein FlgK [Acidobacterium sp.
          MP5ACTX9]
 gi|321163672|gb|ADW69377.1| flagellar hook-associated protein FlgK [Acidobacterium sp.
          MP5ACTX9]
          Length = 469

 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 7/56 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          M  L +   ++   L      +   + N+AN  T G       Y R+ ++F     
Sbjct: 1  MGSLSSLYDLSRGALQADQVALTTTANNVANQNTVG-------YTRQVVTFASGAD 49


>gi|167628881|ref|YP_001679380.1| flagellar hook-associated protein flgk, putative [Heliobacterium
          modesticaldum Ice1]
 gi|167591621|gb|ABZ83369.1| flagellar hook-associated protein flgk, putative [Heliobacterium
          modesticaldum Ice1]
          Length = 736

 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 27/82 (32%), Gaps = 14/82 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS-------FEE 53
          M        IA  G+      + +   NI N  T G       Y R+TI        FE 
Sbjct: 1  MVSTFFGLEIAKRGINANRIGLDVTGHNITNVNTEG-------YSRQTIVSVTTASLFEP 53

Query: 54 VMHGSGGVRVKKIGVDQSTFVE 75
           MHG  G      GVD S    
Sbjct: 54 SMHGVYGAGQIGTGVDVSEIRR 75


>gi|32476538|ref|NP_869532.1| flagellar hook-associated protein [Rhodopirellula baltica SH 1]
 gi|32447084|emb|CAD76893.1| probable flagellar hook-associated protein [Rhodopirellula baltica
           SH 1]
          Length = 584

 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E+  M    R + A+ + I  + +M+   L +
Sbjct: 548 VNIDEESIKMISYQRAFQASSRVISTAAEMLDILLAI 584


>gi|89068701|ref|ZP_01156087.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
 gi|89045664|gb|EAR51726.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
          Length = 131

 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 18/78 (23%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVRV 63
          ++   IA+  +     R Q++SENIANA T G       YR + +S FE ++  S     
Sbjct: 6  MSFFRIASQRMQWLGTRQQVVSENIANADTPG-------YRARDVSPFESMVTRS----- 53

Query: 64 KKIGVDQSTFVEEFDPGH 81
               D  +     +P H
Sbjct: 54 -----DAGSGPAVSNPAH 66


>gi|284041493|ref|YP_003391833.1| flagellar hook-associated protein FlgK [Conexibacter woesei DSM
           14684]
 gi|283945714|gb|ADB48458.1| flagellar hook-associated protein FlgK [Conexibacter woesei DSM
           14684]
          Length = 443

 Score = 37.2 bits (86), Expect = 0.67,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V+   E  +M    R Y A+ +T+    +M+ T ++
Sbjct: 401 VSPDEEMTNMIRFQRGYQASARTMSTLDEMLDTLIN 436


>gi|167567751|ref|ZP_02360667.1| flagellar basal-body rod protein FlgF [Burkholderia oklahomensis
           EO147]
 gi|167574702|ref|ZP_02367576.1| flagellar basal-body rod protein FlgF [Burkholderia oklahomensis
           C6786]
          Length = 242

 Score = 37.2 bits (86), Expect = 0.67,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR +   ++    + DM      L+R
Sbjct: 196 GHLERSNVSPVDEMTSTMALNRAFEVQMRLYNAAGDMADAGNRLIR 241


>gi|330953721|gb|EGH53981.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7]
          Length = 244

 Score = 37.2 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|329849713|ref|ZP_08264559.1| flagellar basal-body rod protein FlgF [Asticcacaulis biprosthecum
           C19]
 gi|328841624|gb|EGF91194.1| flagellar basal-body rod protein FlgF [Asticcacaulis biprosthecum
           C19]
          Length = 249

 Score = 37.2 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 82  PVANA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           P  +A    G ++  NVN ++E   + E NR Y      I+Q HD+  + ++ L R
Sbjct: 192 PATDARVRQGFLEASNVNPMIEVTKLIEINRAYTTLAGIIQQQHDLNKSAVERLGR 247


>gi|256370963|ref|YP_003108787.1| protein of unknown function DUF1078 domain protein [Acidimicrobium
           ferrooxidans DSM 10331]
 gi|256007547|gb|ACU53114.1| protein of unknown function DUF1078 domain protein [Acidimicrobium
           ferrooxidans DSM 10331]
          Length = 431

 Score = 37.2 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 22/44 (50%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G ++  NV++  E  ++      Y AN + ++ +  ++ + + +
Sbjct: 387 GALESSNVSIGSELTNLVVAQTDYQANTKVVQTTATVLQSLVQM 430


>gi|119775453|ref|YP_928193.1| flagellar basal body rod protein FlgB [Shewanella amazonensis
          SB2B]
 gi|119767953|gb|ABM00524.1| flagellar basal-body rod protein FlgB [Shewanella amazonensis
          SB2B]
          Length = 132

 Score = 37.2 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 9/45 (20%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          G+  + A  +++S NIANA T         Y+ + ++F + +  +
Sbjct: 17 GIRAERA--EVLSSNIANADTPH-------YKARDVNFADALQAA 52


>gi|330943207|gb|EGH45614.1| flagellar hook protein FlgE [Pseudomonas syringae pv. pisi str.
          1704B]
          Length = 368

 Score = 37.2 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|300854230|ref|YP_003779214.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
          13528]
 gi|300434345|gb|ADK14112.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
          13528]
          Length = 255

 Score = 37.2 bits (86), Expect = 0.69,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I S + A SG+  Q A+  +I+ N+ANA T G
Sbjct: 1  MIRSFYSAVSGMITQEAKQDVITNNLANANTVG 33



 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 19/40 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NVN++   + +  T R +  + + ++   + +   ++
Sbjct: 211 EKSNVNIVNTMSQLMTTMRSFETDQKAVQSIDETLEKLIN 250


>gi|261838847|gb|ACX98613.1| flagellar basal-body rod protein [Helicobacter pylori 51]
          Length = 140

 Score = 37.2 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 36/136 (26%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            R  +I+ NIAN  T         YR K + FE V+      +  +I  +QS  V     
Sbjct: 19  LRQDMIASNIANVDT-------PFYRPKDLDFESVLAK----KKAEIFENQSNKVLPLAH 67

Query: 80  GHP---------------------VANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            +P                     +A   G     +V++ +ET++M + + +Y+A    +
Sbjct: 68  TNPRHLDFENSAKDGASLFFRDGHLAKNDGN----SVDLDIETSEMGKNSTMYLALSSAL 123

Query: 119 KQSHDMMTTTLDLLRD 134
           K+   ++   +D  ++
Sbjct: 124 KKYRGVINYAIDSSKN 139


>gi|183598618|ref|ZP_02960111.1| hypothetical protein PROSTU_02018 [Providencia stuartii ATCC 25827]
 gi|188020797|gb|EDU58837.1| hypothetical protein PROSTU_02018 [Providencia stuartii ATCC 25827]
          Length = 251

 Score = 37.2 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN       M    R +   ++ ++ + +       LL
Sbjct: 203 SGVIEGSNVNAAEAMVSMIANARYFEMQMKVVRSADENAQKANQLL 248


>gi|187478182|ref|YP_786206.1| flagellar basal body rod protein FlgB [Bordetella avium 197N]
 gi|115422768|emb|CAJ49296.1| flagellar basal-body rod protein [Bordetella avium 197N]
          Length = 135

 Score = 37.2 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 9/44 (20%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L  Q    +++S NIANA T         Y+ +   F+  M  +
Sbjct: 18 LRAQRQ--EVLSSNIANADTPN-------YKARDFDFKTAMQNA 52


>gi|118581823|ref|YP_903073.1| flagellar basal-body rod protein FlgB [Pelobacter propionicus DSM
           2379]
 gi|118504533|gb|ABL01016.1| flagellar basal-body rod protein FlgB [Pelobacter propionicus DSM
           2379]
          Length = 140

 Score = 37.2 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 32/114 (28%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH- 81
            ++S NIANA T         Y  K + FE+ + G+       I  + +T     +P H 
Sbjct: 26  NLVSSNIANAETPN-------YVPKALVFEDELQGA-------IKGNPTTTGSTTNPRHI 71

Query: 82  PVANASGIV------------KYPN-----VNVLVETADMRETNRLYMANLQTI 118
           P+    G +            K P      V +  E + M E   LY A++Q +
Sbjct: 72  PLKGGGGTIHSVQGQVIESPAKTPGKDGNAVELEGEMSRMVENQILYNASVQIL 125


>gi|330899401|gb|EGH30820.1| flagellar hook protein FlgE [Pseudomonas syringae pv. japonica
          str. M301072PT]
          Length = 348

 Score = 37.2 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|220905263|ref|YP_002480575.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869562|gb|ACL49897.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 715

 Score = 37.2 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E +++ +    Y A  + I  +  M+ T L L
Sbjct: 677 VNLDEEMSNLIKFQHSYTAAAKLITTADQMLQTLLGL 713



 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 7/42 (16%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
           +I  + L    A + +   NIANA T G       Y R+ +
Sbjct: 6  LNIGKTALGASQAWISVTGSNIANADTEG-------YSRRYV 40


>gi|34558066|ref|NP_907881.1| flagellar hook protein FlgE [Wolinella succinogenes DSM 1740]
 gi|34483784|emb|CAE10781.1| FLAGELLAR HOOK PROTEIN FLGE [Wolinella succinogenes]
          Length = 745

 Score = 37.2 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          SG+      +  +S NIAN  TTG       YR     FE +   S
Sbjct: 10 SGILTHQVGLDSVSNNIANVNTTG-------YRANIPQFETLFAKS 48


>gi|284041506|ref|YP_003391846.1| flagellar basal-body rod protein FlgB [Conexibacter woesei DSM
           14684]
 gi|283945727|gb|ADB48471.1| flagellar basal-body rod protein FlgB [Conexibacter woesei DSM
           14684]
          Length = 117

 Score = 37.2 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 16/127 (12%)

Query: 4   LIASAHIA-NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           L  S  +A  S L   S R ++++ N+AN  T G       Y+R+ + F   +  +   +
Sbjct: 3   LFDSTQLALESALRGSSMRQELLTNNLANINTPG-------YQRQDLDFHSALQAA---Q 52

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
                  + TF    DP   V           ++   E+A + +    Y A +Q +    
Sbjct: 53  ASGNDPTEVTFRPSTDPSRVVRPD-----GSGLDADQESAALAKNTLEYQALVQVMGART 107

Query: 123 DMMTTTL 129
            +M T L
Sbjct: 108 AIMQTAL 114


>gi|91794989|ref|YP_564640.1| flagellar hook-associated protein [Shewanella denitrificans OS217]
 gi|91716991|gb|ABE56917.1| Flagellar hook-associated protein [Shewanella denitrificans OS217]
          Length = 457

 Score = 37.2 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN   E  ++    + Y AN + I  +  +  T L+
Sbjct: 418 SGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455


>gi|146293693|ref|YP_001184117.1| flagellar basal body rod protein FlgB [Shewanella putrefaciens
          CN-32]
 gi|145565383|gb|ABP76318.1| flagellar basal-body rod protein FlgB [Shewanella putrefaciens
          CN-32]
 gi|319427092|gb|ADV55166.1| flagellar basal-body rod protein FlgB [Shewanella putrefaciens
          200]
          Length = 134

 Score = 37.2 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 9/39 (23%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE 52
          G+  + A  ++IS NIANA T         Y+ + + F 
Sbjct: 17 GIRAERA--EVISSNIANADTPH-------YKARDVDFS 46


>gi|119775444|ref|YP_928184.1| flagellar hook-associated protein [Shewanella amazonensis SB2B]
 gi|119767944|gb|ABM00515.1| flagellar hook-associated protein [Shewanella amazonensis SB2B]
          Length = 638

 Score = 37.2 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    A++ + S NIAN  T G       Y R+  +    +    G      G
Sbjct: 6  LNIARTGVLASQAQLGVTSNNIANVNTEG-------YNRQVATQATHLSQRSGNSFYGTG 58

Query: 68 VDQSTFVEEFD 78
             S+    ++
Sbjct: 59 TYVSSVKRVYN 69


>gi|255654319|ref|ZP_05399728.1| putative flagellar hook-associated protein [Clostridium difficile
          QCD-23m63]
          Length = 125

 Score = 37.2 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M  L +  + ANSG+      +Q IS NI+N  T G       Y R+   F  
Sbjct: 1  MAGLFSILNTANSGMNSHQKAIQTISHNISNLDTEG-------YSRQRTEFAT 46


>gi|218778519|ref|YP_002429837.1| flagellar basal-body rod protein FlgB [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759903|gb|ACL02369.1| Flagellar basal-body rod protein FlgB [Desulfatibacillum
           alkenivorans AK-01]
          Length = 127

 Score = 37.2 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 23/118 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L+ S  I+         R  +IS N+AN  T    P    Y  K + F E +  +     
Sbjct: 14  LVRSLDIS-------RKRQGLISGNLANIET----PD---YHAKDLDFRESLQKAMQGGS 59

Query: 64  KKIGVDQSTFVEEFDPGHPV---ANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           K +    S      +   P    A  +G      V++  E A++ E N +Y ++++++
Sbjct: 60  KDLSRTHSKHYNVMEGSSPEITTAAKAG------VDIDQEMANLAENNLMYRSSVESL 111


>gi|146341929|ref|YP_001206977.1| putative flagellar hook-associated protein FlgK [Bradyrhizobium sp.
           ORS278]
 gi|146194735|emb|CAL78760.1| putative flagellar hook-associated protein 1 (HAP1, FlgK protein)
           [Bradyrhizobium sp. ORS278]
          Length = 621

 Score = 37.2 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 16/36 (44%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           VN+  E +++ +    Y AN   +     MM + L 
Sbjct: 583 VNMDSEMSNLIQVQNTYAANAHIMSVVQSMMQSLLQ 618


>gi|317013373|gb|ADU83981.1| flagellar basal body rod protein FlgB [Helicobacter pylori
           Lithuania75]
          Length = 140

 Score = 37.2 bits (86), Expect = 0.72,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 55/136 (40%), Gaps = 36/136 (26%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            R  +I+ NIAN  T         YR K + FE V+      +  +I  +QS+ V     
Sbjct: 19  LRQDMIASNIANVDT-------PFYRPKDLDFESVLAE----KKAEIFENQSSKVLPLAH 67

Query: 80  GHP---------------------VANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            +P                     +A   G     +V++ +ET++M + + +Y+A    +
Sbjct: 68  TNPRHLDFENSTKNGASLFFRDGHLAKNDGN----SVDLDIETSEMGKNSTMYLALSSAL 123

Query: 119 KQSHDMMTTTLDLLRD 134
           K+   ++   +D  ++
Sbjct: 124 KKYRGVINYAIDSSKN 139


>gi|317492422|ref|ZP_07950851.1| flagellar hook-associated protein FlgK [Enterobacteriaceae
          bacterium 9_2_54FAA]
 gi|316919761|gb|EFV41091.1| flagellar hook-associated protein FlgK [Enterobacteriaceae
          bacterium 9_2_54FAA]
          Length = 561

 Score = 37.2 bits (86), Expect = 0.72,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 17/73 (23%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
          M  LI S   A SGL+     + + S N++N  T         Y R+T+SF +    S  
Sbjct: 1  MANLINS---AMSGLSAAQTALSVTSNNLSNVYT-------QGYNRQTVSFAQSGGISTS 50

Query: 59 -----GGVRVKKI 66
                GV V  I
Sbjct: 51 TGFIGNGVNVSGI 63



 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  ++    + Y AN Q I+ +  + +  L++
Sbjct: 522 SGVNLDEEYGNLMRFQQYYQANAQVIQTATTLFSALLNI 560


>gi|311105932|ref|YP_003978785.1| flagellar basal-body rod protein FlgB [Achromobacter xylosoxidans
          A8]
 gi|310760621|gb|ADP16070.1| flagellar basal-body rod protein FlgB [Achromobacter xylosoxidans
          A8]
          Length = 135

 Score = 37.2 bits (86), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 9/45 (20%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          GL  Q    +++S NIANA T         Y+ +   F+  M  +
Sbjct: 17 GLRAQRQ--EVLSSNIANADTPN-------YKARDFDFKTAMANA 52


>gi|302387756|ref|YP_003823578.1| flagellar hook-associated protein FlgK [Clostridium
          saccharolyticum WM1]
 gi|302198384|gb|ADL05955.1| flagellar hook-associated protein FlgK [Clostridium
          saccharolyticum WM1]
          Length = 680

 Score = 37.2 bits (86), Expect = 0.72,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDT 38
           +   IA   ++     + +  +NIAN  T G T
Sbjct: 6  FSGFTIAQLAMSASQRALDVTGQNIANINTKGYT 39


>gi|83309603|ref|YP_419867.1| flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1]
 gi|82944444|dbj|BAE49308.1| Flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1]
          Length = 843

 Score = 37.2 bits (86), Expect = 0.72,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E   M  T R Y A  + I  +  M+   + + R
Sbjct: 801 EASTVDIGSEFTTMIITQRAYSAAAKIITTADQMLDELVQIKR 843



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 15/58 (25%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------HGSGGVR 62
          SGLA QS+ M  IS+NI N  TTG       Y+   ++F+ ++        +  GGV+
Sbjct: 12 SGLASQSSAMGAISDNITNVNTTG-------YKGAKVNFQTLVTKQVSLTTYSPGGVQ 62


>gi|327543408|gb|EGF29832.1| flagellar hook-associated protein FlgK [Rhodopirellula baltica
           WH47]
          Length = 562

 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E+  M    R + A+ + I  + +M+   L +
Sbjct: 526 VNIDEESIKMISYQRAFQASSRVISTAAEMLDILLAI 562


>gi|291334315|gb|ADD93976.1| hypothetical protein Rsph17025_1668 [uncultured marine bacterium
           MedDCM-OCT-S09-C247]
          Length = 251

 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT---TTLDL 131
            G ++  NVN + E     +  R +  N++ IK++ D+ +     +DL
Sbjct: 202 QGYLESSNVNAIEELIRNIDMQRQFEINVKLIKKASDLDSAGTKLMDL 249


>gi|226313073|ref|YP_002772967.1| flagellar basal-body rod protein FlgB [Brevibacillus brevis NBRC
          100599]
 gi|226096021|dbj|BAH44463.1| flagellar basal-body rod protein FlgB [Brevibacillus brevis NBRC
          100599]
          Length = 136

 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 7/42 (16%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          L   + R + I+ N+AN  T         ++ + + FE  + 
Sbjct: 14 LDAATLRHRTIANNLANIDTPQ-------FKSQQVIFESFLQ 48


>gi|210135738|ref|YP_002302177.1| flagellar basal body rod protein FlgB [Helicobacter pylori P12]
 gi|210133706|gb|ACJ08697.1| flagellar basal-body rod protein FlgB [Helicobacter pylori P12]
 gi|317179761|dbj|BAJ57549.1| flagellar basal body rod protein FlgB [Helicobacter pylori F30]
          Length = 140

 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 55/136 (40%), Gaps = 36/136 (26%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            R  +I+ NIAN  T         YR K + FE V+      +  +I  +QS+ V     
Sbjct: 19  LRQDMIASNIANVDT-------PFYRPKDLDFESVLAE----KKAEIFENQSSKVLPLAH 67

Query: 80  GHP---------------------VANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            +P                     +A   G     +V++ +ET++M + + +Y+A    +
Sbjct: 68  TNPRHLDFENSAKDGASLFFRDGHLAKNDGN----SVDLDIETSEMGKNSTMYLALSSAL 123

Query: 119 KQSHDMMTTTLDLLRD 134
           K+   ++   +D  ++
Sbjct: 124 KKYRGVINYAIDSSKN 139


>gi|85712251|ref|ZP_01043302.1| Flagellar basal body protein [Idiomarina baltica OS145]
 gi|85693878|gb|EAQ31825.1| Flagellar basal body protein [Idiomarina baltica OS145]
          Length = 134

 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          + R ++I+ NIANA T G       Y+ K + F++ +  + 
Sbjct: 20 TQRAELIANNIANADTPG-------YKAKGLDFQQALAQAQ 53


>gi|330893070|gb|EGH25731.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
          mori str. 301020]
          Length = 202

 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 12/24 (50%), Positives = 15/24 (62%)

Query: 13 SGLAVQSARMQIISENIANARTTG 36
          +GLA Q   +  IS N+AN  TTG
Sbjct: 22 TGLAAQDTNLTTISNNLANVSTTG 45


>gi|253574272|ref|ZP_04851614.1| flagellar hook-basal body protein [Paenibacillus sp. oral taxon
          786 str. D14]
 gi|251846749|gb|EES74755.1| flagellar hook-basal body protein [Paenibacillus sp. oral taxon
          786 str. D14]
          Length = 273

 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 10/55 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M+  + SA ++ SG+     R+ ++++NIAN+ T G       Y+RK  +FE+ +
Sbjct: 1  MNNTVISAMVSMSGIQ---QRLDLLADNIANSNTVG-------YKRKEANFEDTL 45



 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 17/39 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G ++  NV++    A+M +  R Y    + +     MM
Sbjct: 227 QGALEASNVDLTEAMAEMLQVQRAYQLTARALTSGETMM 265


>gi|119503645|ref|ZP_01625728.1| hypothetical protein MGP2080_03860 [marine gamma proteobacterium
           HTCC2080]
 gi|119460707|gb|EAW41799.1| hypothetical protein MGP2080_03860 [marine gamma proteobacterium
           HTCC2080]
          Length = 244

 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 82  PVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P AN   A G ++  NV+ +    +M    R +  ++QTIK + ++  ++  +++
Sbjct: 188 PDANVRVAVGALETSNVSPVGAMVEMITLARSFEQHIQTIKSAEELDASSASIMK 242


>gi|291276999|ref|YP_003516771.1| flagellar hook protein FlgE [Helicobacter mustelae 12198]
 gi|290964193|emb|CBG40039.1| Putative flagellar hook protein, FlgE [Helicobacter mustelae 12198]
          Length = 600

 Score = 37.2 bits (86), Expect = 0.74,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 19/45 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  N +V     ++    R Y  N + +    D++   ++L R
Sbjct: 556 YLETSNTDVTSALTNLILMQRGYSMNAKALSTGDDLIKEAINLKR 600



 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 21/58 (36%), Gaps = 8/58 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-HGSGGVRVKKIGVD 69
          SG+      +  IS NIAN  T G       YR     F+ ++      V    +  D
Sbjct: 10 SGIKTHQFGLDSISNNIANVNTPG-------YREHIPEFKTLLSRNIASVNGSTVSSD 60


>gi|149184208|ref|ZP_01862526.1| Flagellar basal-body rod FlgF [Erythrobacter sp. SD-21]
 gi|148831528|gb|EDL49961.1| Flagellar basal-body rod FlgF [Erythrobacter sp. SD-21]
          Length = 246

 Score = 37.2 bits (86), Expect = 0.74,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
          MD L    H A SG+       ++I+ N+ANA T G
Sbjct: 1  MDRL---IHTALSGMRASMDSQRVIASNMANANTLG 33


>gi|114762159|ref|ZP_01441627.1| hypothetical protein 1100011001331_R2601_14510 [Pelagibaca
           bermudensis HTCC2601]
 gi|114545183|gb|EAU48186.1| hypothetical protein R2601_14510 [Roseovarius sp. HTCC2601]
          Length = 125

 Score = 37.2 bits (86), Expect = 0.74,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 36/143 (25%)

Query: 4   LIASAHIANSGLAVQS---ARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSG 59
           +  + ++  + +A+      R  + ++NIANA T G       Y    I  FE  + GS 
Sbjct: 1   MFQNLNVFQTAMALAKHSGLRQALSAQNIANADTPG-------YHALDIPDFEATLRGSE 53

Query: 60  GVR-------VKKIGVDQSTFVEEFDPGHPVA--NASGIVKYPNVNVLVETADMRETNRL 110
           G +       +  +  D        +P    A  + +G     +V++  E       +R 
Sbjct: 54  GSQRATRDKHLHGLRQDHLP-----EPTLRRASVDPNGN----SVSIEGEMVTAVAASRG 104

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           +        ++  +  ++L++LR
Sbjct: 105 H-------GRALSIYRSSLNILR 120


>gi|268589981|ref|ZP_06124202.1| flagellar basal-body rod protein FlgF [Providencia rettgeri DSM
           1131]
 gi|291314699|gb|EFE55152.1| flagellar basal-body rod protein FlgF [Providencia rettgeri DSM
           1131]
          Length = 251

 Score = 37.2 bits (86), Expect = 0.74,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +G+++  NVN       M    R +   ++ ++ + +       LL
Sbjct: 203 AGVIEGSNVNAAEAMVSMIANARHFEMQMKVVRSADENAQRANQLL 248


>gi|170289254|ref|YP_001739492.1| flagellar basal-body rod protein FlgB [Thermotoga sp. RQ2]
 gi|281412856|ref|YP_003346935.1| flagellar basal-body rod protein FlgB [Thermotoga naphthophila
           RKU-10]
 gi|170176757|gb|ACB09809.1| flagellar basal-body rod protein FlgB [Thermotoga sp. RQ2]
 gi|281373959|gb|ADA67521.1| flagellar basal-body rod protein FlgB [Thermotoga naphthophila
           RKU-10]
          Length = 127

 Score = 37.2 bits (86), Expect = 0.74,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 38/109 (34%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----------------- 56
            + V   R  + S NIAN      TPG   Y+RK ++FEE++                  
Sbjct: 12  AMDVALLRQNVHSLNIANV----STPG---YKRKYVAFEELLKESEMKLKLSKTNEKHLI 64

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           GS  V   ++ VD +T +             G     NV++  E   + 
Sbjct: 65  GSKSVVEPRVLVDNTTTMR----------NDGN----NVDIDYEMVQLV 99


>gi|307546962|ref|YP_003899441.1| flagellar hook-associated protein FlgK [Halomonas elongata DSM
           2581]
 gi|307218986|emb|CBV44256.1| flagellar hook-associated protein FlgK [Halomonas elongata DSM
           2581]
          Length = 555

 Score = 37.2 bits (86), Expect = 0.75,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A++    + Y AN + I+    M+ T L L
Sbjct: 515 SGVNLDEEAANLIRYQQYYQANAKVIEAGKTMIDTILGL 553



 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 8/64 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      SGL      +   S NI+N  T G       Y R+     E   G GGV+V 
Sbjct: 1  MSIFSTGLSGLNAAQNALSTTSNNISNVFTPG-------YNREVAILGESASG-GGVQVN 52

Query: 65 KIGV 68
           I  
Sbjct: 53 DIQR 56


>gi|291276682|ref|YP_003516454.1| putative flagellar hook-associated protein [Helicobacter mustelae
           12198]
 gi|290963876|emb|CBG39712.1| putative flagellar hook-associated protein [Helicobacter mustelae
           12198]
          Length = 606

 Score = 37.2 bits (86), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYSANAKVITAIDKMIDTLLSI 604


>gi|285018203|ref|YP_003375914.1| flagellar hook-associated protein 1 (hap1) [Xanthomonas albilineans
           GPE PC73]
 gi|283473421|emb|CBA15926.1| probable flagellar hook-associated protein 1 (hap1) [Xanthomonas
           albilineans]
          Length = 624

 Score = 37.2 bits (86), Expect = 0.75,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              VN+  E A+M +  + Y A    I  +  M  + L  +R
Sbjct: 583 LSGVNLDEEAANMLQLQQAYEAASHIISTADTMFQSILSAIR 624


>gi|207093272|ref|ZP_03241059.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_AG0C1]
          Length = 40

 Score = 37.2 bits (86), Expect = 0.75,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NV++     ++    R + AN + +  S  ++ T L+L
Sbjct: 1   NVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNL 38


>gi|288958674|ref|YP_003449015.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288910982|dbj|BAI72471.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 240

 Score = 37.2 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 15/75 (20%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------GVRVKKIGV 68
          +A+Q   + + S NIAN  TTG       Y+ + + F E +   G       V+ + +  
Sbjct: 13 MALQRQ-LDVTSNNIANMNTTG-------YKNQRMLFTEFLEKPGLHEKVSFVQDRAVVR 64

Query: 69 DQSTFVEEFDPGHPV 83
          D S        G+P+
Sbjct: 65 DLSNGAMT-QTGNPL 78



 Score = 36.8 bits (85), Expect = 1.00,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 4/47 (8%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ----SHDMMTTT 128
           A G+++  NV  +VE   M +  R YM+  + I         M+   
Sbjct: 190 AQGLLEGSNVKPVVEMTQMIDIQRQYMSAQKMIDNEHERIRTMIQRL 236


>gi|253682758|ref|ZP_04863553.1| carnitinyl-CoA dehydratase [Clostridium botulinum D str. 1873]
 gi|253560957|gb|EES90411.1| carnitinyl-CoA dehydratase [Clostridium botulinum D str. 1873]
          Length = 258

 Score = 37.2 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 11/60 (18%)

Query: 83  VANASGIVKYPNV---NVLVETA---DMRETNRLYMANLQTIKQS---HDMMTTTLDLLR 133
           +A + G+++ PNV    V  E      +    R Y   +  +      ++++   L+L +
Sbjct: 138 LATSGGLIRLPNVIPRKVATEMVLTGKLISAQRAYE--VGLVNHVVPKNEVLEKALELAK 195


>gi|260431757|ref|ZP_05785728.1| flagellar hook-associated protein FlgK [Silicibacter
          lacuscaerulensis ITI-1157]
 gi|260415585|gb|EEX08844.1| flagellar hook-associated protein FlgK [Silicibacter
          lacuscaerulensis ITI-1157]
          Length = 483

 Score = 37.2 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A  GL+  S    ++S NIANA T G       Y ++T+          GV+V
Sbjct: 3  MSTALNNALGGLSAASRGAAVVSGNIANALTPG-------YAKRTLELATSQISGNGVQV 55

Query: 64 KKIGVDQST 72
            +      
Sbjct: 56 VGVTRHHDP 64


>gi|254504490|ref|ZP_05116641.1| Flagella basal body rod protein [Labrenzia alexandrii DFL-11]
 gi|222440561|gb|EEE47240.1| Flagella basal body rod protein [Labrenzia alexandrii DFL-11]
          Length = 246

 Score = 37.2 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 10/68 (14%)

Query: 14 GLAVQS-AR--MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          GL+ QS  R  + +++ N+AN  TTG       ++ + + FEE +         +   + 
Sbjct: 8  GLSRQSALRNQLDVVANNMANINTTG-------FKSQRLLFEEYLMPVAEATEFQTPDET 60

Query: 71 STFVEEFD 78
           ++V ++ 
Sbjct: 61 LSYVLDYQ 68


>gi|84514825|ref|ZP_01002188.1| flagellar basal-body rod protein FlgG [Loktanella vestfoldensis
           SKA53]
 gi|84510984|gb|EAQ07438.1| flagellar basal-body rod protein FlgG [Loktanella vestfoldensis
           SKA53]
          Length = 273

 Score = 37.2 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 21/43 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            SG ++  NV++ +E  DM    + +  + + ++   DM+   
Sbjct: 229 QSGTLETSNVDLTIELTDMIRAQQQFSGSSRILQTYSDMIEKL 271


>gi|148256817|ref|YP_001241402.1| putative flagellar hook-associated protein FlgK [Bradyrhizobium sp.
           BTAi1]
 gi|146408990|gb|ABQ37496.1| putative flagellar hook-associated protein 1 (HAP1, FlgK protein)
           [Bradyrhizobium sp. BTAi1]
          Length = 611

 Score = 37.2 bits (86), Expect = 0.77,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 16/36 (44%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           VN+  E +++ +    Y AN   +     MM + L 
Sbjct: 573 VNMDSEMSNLIQVQNTYSANAHIMSVVQSMMQSLLQ 608


>gi|77457728|ref|YP_347233.1| flagellar basal body rod protein FlgF [Pseudomonas fluorescens
           Pf0-1]
 gi|77381731|gb|ABA73244.1| flagellar basal-body rod protein [Pseudomonas fluorescens Pf0-1]
          Length = 246

 Score = 37.2 bits (86), Expect = 0.77,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 6/60 (10%)

Query: 78  DPGHPVANAS---GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH---DMMTTTLDL 131
            P    AN     G ++  NVN + E   +    + +  +++ +  +      M   L +
Sbjct: 186 QPAPADANVKLVSGFLESSNVNAVEEMTSVLALAKQFELHVKMMNTAKDDDQAMARVLQI 245


>gi|224417720|ref|ZP_03655726.1| hypothetical protein HcanM9_00441 [Helicobacter canadensis MIT
           98-5491]
 gi|253827065|ref|ZP_04869950.1| flagellar protein flgE [Helicobacter canadensis MIT 98-5491]
 gi|313141262|ref|ZP_07803455.1| predicted protein [Helicobacter canadensis MIT 98-5491]
 gi|253510471|gb|EES89130.1| flagellar protein flgE [Helicobacter canadensis MIT 98-5491]
 gi|313130293|gb|EFR47910.1| predicted protein [Helicobacter canadensis MIT 98-5491]
          Length = 74

 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  N ++   TA+         AN+ +++ +  M  + LD+
Sbjct: 32  ETSNTDLTQSTANTITAQNGVEANVASMQTADSMYQSLLDI 72


>gi|220913735|ref|YP_002489044.1| flagellar basal-body rod protein FlgB [Arthrobacter
          chlorophenolicus A6]
 gi|219860613|gb|ACL40955.1| flagellar basal-body rod protein FlgB [Arthrobacter
          chlorophenolicus A6]
          Length = 113

 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 7/47 (14%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           S L   + R + I+ NIAN  T         Y+ K +SFE+ +  S
Sbjct: 11 ASALDGLALRQRTIANNIANINTPN-------YKAKRVSFEDELAAS 50


>gi|160896078|ref|YP_001561660.1| flagellar basal-body rod protein FlgF [Delftia acidovorans SPH-1]
 gi|160361662|gb|ABX33275.1| flagellar basal-body rod protein FlgF [Delftia acidovorans SPH-1]
          Length = 246

 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG ++  NVN +     M    R +   ++ ++ +     T   LL
Sbjct: 197 SGAIEGSNVNSVETMVGMIAAARQFETQMRLLQTAETNDKTASQLL 242


>gi|260429533|ref|ZP_05783510.1| flagellar basal-body rod protein FlgF [Citreicella sp. SE45]
 gi|260420156|gb|EEX13409.1| flagellar basal-body rod protein FlgF [Citreicella sp. SE45]
          Length = 237

 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
           ++P        G V+  NV+ +++ A M E  R Y  
Sbjct: 180 YEPAETPRVMQGFVENSNVDPILQIARMIEVQRAYEM 216



 Score = 33.7 bits (77), Expect = 7.9,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 10/57 (17%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEE---VMHGSGGVRVKKIGVDQSTFVE 75
          MQ+I+ NIANA TTG       YR++ + F E       SG V +    V  ++F +
Sbjct: 19 MQMIANNIANAATTG-------YRQQGVVFSEYVRQTDDSGSVAMSAAHVRNTSFEQ 68


>gi|254780091|ref|YP_003058198.1| flagellar basal body rod protein FlgB [Helicobacter pylori B38]
 gi|254002004|emb|CAX30263.1| Flagellar basal-body rod protein DlgB [Helicobacter pylori B38]
          Length = 140

 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 62/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAE--- 49

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---------------------VANASGIVKYPNVNVLV 99
            +  +I  +QS  V      +P                     +A   G     +V++ +
Sbjct: 50  -KKAEIFENQSNKVLPLAHTNPRHLDFENSTKDGASLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKN 139


>gi|254255088|ref|ZP_04948405.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
 gi|124899733|gb|EAY71576.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
          Length = 241

 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 5/56 (8%)

Query: 83  VANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            A+ +     G ++  N++ + E        R +   ++  + + +M  T   L+R
Sbjct: 185 DADETVTVKGGHLEGSNISAIEEMMQTLSLTRSFEMQMRLYRAADEMADTGNRLIR 240


>gi|289679029|ref|ZP_06499919.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae
          FF5]
          Length = 279

 Score = 37.2 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S +I  SGL   +  + +   NIAN  TTG
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTG 31


>gi|225871944|ref|YP_002753398.1| putative flagellar basal-body rod protein FlgG [Acidobacterium
          capsulatum ATCC 51196]
 gi|225793888|gb|ACO33978.1| putative flagellar basal-body rod protein FlgG [Acidobacterium
          capsulatum ATCC 51196]
          Length = 245

 Score = 37.2 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 7/48 (14%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          A +GL  +S  +  ++ N+ANA T G       +R +   F +V+ G 
Sbjct: 8  ALTGLLARSQALDSVASNLANAGTAG-------FRAQQDYFRDVLAGP 48


>gi|123442787|ref|YP_001006764.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|332161319|ref|YP_004297896.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|2494519|sp|Q56893|FLGB_YEREN RecName: Full=Flagellar basal-body rod protein flgB
 gi|793898|emb|CAA88192.1| flgB [Yersinia enterocolitica]
 gi|122089748|emb|CAL12601.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|318605239|emb|CBY26737.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325665549|gb|ADZ42193.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
          Length = 137

 Score = 37.2 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 25/126 (19%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQSTF 73
           L  Q    +I+S NIANA T G       ++ + I F   +       R    GV  S  
Sbjct: 18  LRAQRQ--EILSSNIANADTPG-------FQARDIDFSSQLKKVMEQGRASGTGVSLSLT 68

Query: 74  VEEFDPGH----PVANASGIVKYPN--------VNVLVETADMRETNRLYMANLQTI-KQ 120
                P      P  +   + + P+        V++  E  +  + +  Y  +L  +  Q
Sbjct: 69  SARHIPASTVQPPDLDL--LFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTVLGGQ 126

Query: 121 SHDMMT 126
              MM+
Sbjct: 127 IKGMMS 132


>gi|317133463|ref|YP_004092777.1| flagellar hook-associated protein FlgK [Ethanoligenens harbinense
          YUAN-3]
 gi|315471442|gb|ADU28046.1| flagellar hook-associated protein FlgK [Ethanoligenens harbinense
          YUAN-3]
          Length = 548

 Score = 37.2 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 7/59 (11%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M  L    + A SGL+     + + + NI+NA T G       Y R+ +  + V   +G
Sbjct: 1  MASLNTGLNTALSGLSASQTALGVTAHNISNAATDG-------YSRQMVDLQAVNVNTG 52


>gi|330839540|ref|YP_004414120.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
           35185]
 gi|329747304|gb|AEC00661.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
           35185]
          Length = 137

 Score = 37.2 bits (86), Expect = 0.80,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 44/121 (36%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------MHGSGG 60
           +  +   G+   + R ++IS NIAN  T         +++  + FE++      +   GG
Sbjct: 10  ALDVMQRGMGAANLRQEVISHNIANVNTPN-------FKKSNVVFEDLLAKELDLDAEGG 62

Query: 61  VRV-----------------KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
           +++                  KI +D+S+    +D               NV++ VE A 
Sbjct: 63  LKIVRTHDRHMPISFRGRALAKIELDKSSS-MRYDNN-------------NVDIDVEMAS 108

Query: 104 M 104
           +
Sbjct: 109 L 109


>gi|322378866|ref|ZP_08053283.1| flagellar hook protein FlgE [Helicobacter suis HS1]
 gi|321148676|gb|EFX43159.1| flagellar hook protein FlgE [Helicobacter suis HS1]
          Length = 601

 Score = 37.2 bits (86), Expect = 0.81,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      D++   ++L
Sbjct: 557 YLETSNVNAGRSLTNLILMQRGYSMNAKAFTTGDDLIKEAINL 599


>gi|322380410|ref|ZP_08054616.1| flagellar hook protein FlgE [Helicobacter suis HS5]
 gi|321147200|gb|EFX41894.1| flagellar hook protein FlgE [Helicobacter suis HS5]
          Length = 601

 Score = 37.2 bits (86), Expect = 0.81,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN      ++    R Y  N +      D++   ++L
Sbjct: 557 YLETSNVNAGRSLTNLILMQRGYSMNAKAFTTGDDLIKEAINL 599


>gi|89072309|ref|ZP_01158888.1| putative flagellar hook-associated protein [Photobacterium sp.
          SKA34]
 gi|89051841|gb|EAR57293.1| putative flagellar hook-associated protein [Photobacterium sp.
          SKA34]
          Length = 144

 Score = 37.2 bits (86), Expect = 0.81,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 12/69 (17%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-----VMHGSG 59
          +   +I  +GL      + + + N+AN  T G       + R+           ++    
Sbjct: 1  MNMINIGLTGLNANKTALDVTAHNVANVNTPG-------FSRQQAMMSALAGNNILSAGS 53

Query: 60 GVRVKKIGV 68
          GV V  I  
Sbjct: 54 GVEVASIRR 62


>gi|269138588|ref|YP_003295288.1| flagellar hook-associated protein [Edwardsiella tarda EIB202]
 gi|267984248|gb|ACY84077.1| flagellar hook-associated protein [Edwardsiella tarda EIB202]
          Length = 546

 Score = 37.2 bits (86), Expect = 0.81,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 14/70 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          +    + A SGL+     + + S NI N  T G       Y R+T+SF E    S     
Sbjct: 1  MANLINNAMSGLSAAQTALAVTSNNINNVYTAG-------YNRQTVSFAENNGTSTPAGF 53

Query: 59 --GGVRVKKI 66
             GV V  I
Sbjct: 54 IGNGVVVSGI 63



 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  D+    + YMAN Q I+ +  M    LD+
Sbjct: 507 SGVNLDEEYGDLVRFQQYYMANAQVIQTATSMFNALLDI 545


>gi|192361114|ref|YP_001982394.1| flagellar hook-associated protein 1 FlgK [Cellvibrio japonicus
          Ueda107]
 gi|190687279|gb|ACE84957.1| flagellar hook-associated protein 1 FlgK [Cellvibrio japonicus
          Ueda107]
          Length = 923

 Score = 37.2 bits (86), Expect = 0.81,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +      A SGL      ++    NI+NA TTG       Y R+ + +      S G
Sbjct: 1  MSGILSNAISGLQASQNALRTAGHNISNANTTG-------YTRQQVVYSTRPEQSAG 50



 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             VN+  E AD+    +LY AN + I  + ++  T L+ L
Sbjct: 884 SGVNLDEEAADLIRFQQLYQANARVITVARELFDTLLNAL 923


>gi|15895480|ref|NP_348829.1| flagellar hook-associated protein FlgK [Clostridium
          acetobutylicum ATCC 824]
 gi|15025209|gb|AAK80169.1|AE007721_9 Flagellar hook-associated protein FlgK [Clostridium
          acetobutylicum ATCC 824]
 gi|325509627|gb|ADZ21263.1| Flagellar hook-associated protein FlgK [Clostridium
          acetobutylicum EA 2018]
          Length = 634

 Score = 37.2 bits (86), Expect = 0.81,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M  L  + +I  SGL V    + +   NI+NA T G       Y R+ +  + 
Sbjct: 1  MPGLFGTLNIGVSGLTVNQQAIDVTGHNISNASTDG-------YSRQRVDIQT 46


>gi|289523577|ref|ZP_06440431.1| flagellar basal-body rod protein FlgB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503269|gb|EFD24433.1| flagellar basal-body rod protein FlgB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 135

 Score = 37.2 bits (86), Expect = 0.83,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 26/115 (22%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR----------- 62
           G+   S R + IS+N+AN  T G       Y R  ++FE+ +  +  V            
Sbjct: 12  GMKGLSKRFEAISQNVANTNTPG-------YARSEVTFEDELREALSVSKRPKLPLATTH 64

Query: 63  ---VKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
              +  +  D +    +E      +A   G      V++ +E + + +    Y A
Sbjct: 65  EAHITNLPRDIKGITPKEHRVVGELARWDGN----GVDLDIEMSKLAQARMTYTA 115


>gi|323697478|ref|ZP_08109390.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. ND132]
 gi|323457410|gb|EGB13275.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans
           ND132]
          Length = 711

 Score = 37.2 bits (86), Expect = 0.84,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E +D+      Y A  + I  + +M+ T L L
Sbjct: 671 SGVNLDEEMSDLIRYQASYTAAAKLITTADEMLQTILSL 709


>gi|317181262|dbj|BAJ59048.1| flagellar basal body rod protein FlgB [Helicobacter pylori F32]
          Length = 140

 Score = 37.2 bits (86), Expect = 0.84,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAE--- 49

Query: 61  VRVKKIGVDQST---FVEEFDPGHPV------------------ANASGIVKYPNVNVLV 99
            +  +I  +QS+    +   +P H                    A   G     +V++ +
Sbjct: 50  -KKAEIFENQSSKILPLAHTNPRHLDFENSAKDGASLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKN 139


>gi|327478810|gb|AEA82120.1| flagellar basal-body rod protein FlgF [Pseudomonas stutzeri DSM
           4166]
          Length = 234

 Score = 37.2 bits (86), Expect = 0.85,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 78  DPGHPVAN---ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +P  P  +   ASG ++  NV+ + E A     NRL+   ++ +K + D+      ++R
Sbjct: 174 EPAQPSEDVRLASGFLESSNVSAIDELASTMSLNRLFETQVKMMKAAEDLSDAGNRMIR 232


>gi|170694400|ref|ZP_02885554.1| flagellar hook-associated protein FlgK [Burkholderia graminis
           C4D1M]
 gi|170140823|gb|EDT08997.1| flagellar hook-associated protein FlgK [Burkholderia graminis
           C4D1M]
          Length = 657

 Score = 37.2 bits (86), Expect = 0.85,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++ +  +LY AN + I+ +  +  T L + +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLLGIFQ 657


>gi|73539451|ref|YP_299818.1| flagellar basal body rod protein FlgF [Ralstonia eutropha JMP134]
 gi|72122788|gb|AAZ64974.1| Protein of unknown function DUF1078 [Ralstonia eutropha JMP134]
          Length = 247

 Score = 37.2 bits (86), Expect = 0.86,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 17/46 (36%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG ++  NVN      DM    R +   ++ I  +         LL
Sbjct: 199 SGAIEGSNVNPTEAMVDMIANARRFEMQMKMITGADTNDQRANQLL 244


>gi|295678051|ref|YP_003606575.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1002]
 gi|295437894|gb|ADG17064.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1002]
          Length = 664

 Score = 37.2 bits (86), Expect = 0.86,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A++ +  +LY AN + I+ +  +  T L +
Sbjct: 624 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLLGI 662


>gi|264678617|ref|YP_003278524.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          CNB-2]
 gi|299533500|ref|ZP_07046879.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          S44]
 gi|262209130|gb|ACY33228.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          CNB-2]
 gi|298718507|gb|EFI59485.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          S44]
          Length = 127

 Score = 37.2 bits (86), Expect = 0.86,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 7/40 (17%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           RM++++ NIANA T G       Y+ K I F+  +  + 
Sbjct: 16 KRMEVLASNIANADTPG-------YQAKDIDFKAALEETQ 48


>gi|144900469|emb|CAM77333.1| flagellar basal-body rod protein FlgB [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 132

 Score = 37.2 bits (86), Expect = 0.86,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 43/128 (33%), Gaps = 25/128 (19%)

Query: 17  VQSARMQ-------IISENIANARTTGDTPGS-DPYRRKTI----SFEEVMHGSGGVRVK 64
            QS RM        ++SENIANA T    P    PY  K +         +  +    V 
Sbjct: 11  AQS-RMDWIARRQEVLSENIANANTPKYIPKDLKPYNFKDVLDQSVPAVKLRATNTAHVV 69

Query: 65  KIGVDQS---TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
               D+       + F+   P  NA        V +  + A + E    Y       ++ 
Sbjct: 70  PEFRDEQRVVDTKKVFE-SSPDGNA--------VVLEEQMAKVGEAKTAYDVAAGLFQRQ 120

Query: 122 HDMMTTTL 129
             M+ T L
Sbjct: 121 FKMLKTAL 128


>gi|54307275|ref|YP_128295.1| flagellar hook-associated protein [Photobacterium profundum SS9]
 gi|46911695|emb|CAG18493.1| Hypothetical flagellar hook-associated protein [Photobacterium
          profundum SS9]
          Length = 468

 Score = 37.2 bits (86), Expect = 0.86,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 10/67 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---VMHGSGGV 61
          ++  +I  SGL   +A + + S NIANA T G       + R+ + F           GV
Sbjct: 1  MSLINIGLSGLNAANAGLSVTSHNIANAMTPG-------FSRQRVGFGAQVSAGSQGAGV 53

Query: 62 RVKKIGV 68
           V  +  
Sbjct: 54 GVSSVER 60



 Score = 36.8 bits (85), Expect = 0.91,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A +    ++Y AN + I  +  +   TL + R
Sbjct: 428 SGVNLDEEAASIMTYTQMYQANAKVISTAQQLFDVTLAMFR 468


>gi|302872574|ref|YP_003841210.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          obsidiansis OB47]
 gi|302575433|gb|ADL43224.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          obsidiansis OB47]
          Length = 133

 Score = 36.8 bits (85), Expect = 0.87,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 7/39 (17%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           R +IIS NIANA T G       Y+ K ++FE  +  S
Sbjct: 20 KRNEIISNNIANADTPG-------YKAKDLNFEAFLQRS 51


>gi|260772280|ref|ZP_05881196.1| flagellar hook-associated protein FlgK [Vibrio metschnikovii CIP
          69.14]
 gi|260611419|gb|EEX36622.1| flagellar hook-associated protein FlgK [Vibrio metschnikovii CIP
          69.14]
          Length = 641

 Score = 36.8 bits (85), Expect = 0.87,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 23/69 (33%), Gaps = 8/69 (11%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          A S L  Q   +     NIAN  T G       Y R+++          G +   +GV  
Sbjct: 10 AQSVLTAQRQ-LNTTGHNIANVNTEG-------YSRQSVIQGTNAPRQLGGQTYGMGVHV 61

Query: 71 STFVEEFDP 79
                +D 
Sbjct: 62 ENVRRSWDQ 70


>gi|24459279|gb|AAL86632.1| FlgG [Vibrio fischeri ES114]
          Length = 43

 Score = 36.8 bits (85), Expect = 0.87,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 10/52 (19%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE 52
          M+    +  ++ +GL  Q   +  IS N+ANA T G       +++    FE
Sbjct: 1  MNP---ALWVSKTGLDAQQTNIATISNNLANASTVG-------FKKSRAVFE 42


>gi|312962289|ref|ZP_07776780.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          WH6]
 gi|311283216|gb|EFQ61806.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          WH6]
          Length = 678

 Score = 36.8 bits (85), Expect = 0.88,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 9/75 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-VMHGSGGVRV 63
          ++  +I  SGL      + ++S NIAN  T G       Y R+  +      +  GGV +
Sbjct: 1  MSLLNIGMSGLNAAQGSLSVLSNNIANVNTPG-------YSRQQTTQNAGASNPYGGVYI 53

Query: 64 KKIGVDQSTFVEEFD 78
             G   +     ++
Sbjct: 54 -GTGTTLADVRRIYN 67


>gi|209521596|ref|ZP_03270294.1| flagellar hook-associated protein FlgK [Burkholderia sp. H160]
 gi|209497979|gb|EDZ98136.1| flagellar hook-associated protein FlgK [Burkholderia sp. H160]
          Length = 664

 Score = 36.8 bits (85), Expect = 0.88,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A++ +  +LY AN + I+ +  +  T L +
Sbjct: 624 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLLGI 662


>gi|158422261|ref|YP_001523553.1| flagellar basal body rod protein FlgB [Azorhizobium caulinodans ORS
           571]
 gi|158329150|dbj|BAF86635.1| flagellar basal-body rod protein [Azorhizobium caulinodans ORS 571]
          Length = 169

 Score = 36.8 bits (85), Expect = 0.88,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 28/124 (22%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTI-SFEEVMH-----------GSGGVRVKKI 66
           S R   I+ NIANA T G       Y+ + +  F  VM+           G  GV     
Sbjct: 60  SVRQATITGNIANANTPG-------YQAREVEPFSAVMNKTRLSMATTEPGHMGVPFAGA 112

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              ++   + ++       ASG     +VN+  E     + NR Y  N   ++  + M+ 
Sbjct: 113 ETSKTKESDSWEVT-----ASGN----SVNLDQEMLKAADVNRTYTLNTNIVRAFNRMIL 163

Query: 127 TTLD 130
           T++ 
Sbjct: 164 TSVR 167


>gi|157781876|gb|ABV72264.1| FlgE [Azospirillum brasilense]
          Length = 297

 Score = 36.8 bits (85), Expect = 0.88,   Method: Composition-based stats.
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          GL  Q+  +  IS NIANA T+G
Sbjct: 13 GLTAQNRALGTISNNIANASTSG 35


>gi|192360466|ref|YP_001982403.1| flagellar basal-body rod protein FlgB [Cellvibrio japonicus
          Ueda107]
 gi|190686631|gb|ACE84309.1| flagellar basal-body rod protein FlgB [Cellvibrio japonicus
          Ueda107]
          Length = 133

 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 7/50 (14%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
           +  I  S L  +S R  +++ N+AN  T         Y+ + + F++ +
Sbjct: 7  KALGIHESALKFRSERASVLANNLANIDTPN-------YKARDVDFKQAL 49


>gi|149911705|ref|ZP_01900313.1| flagellar basal body protein [Moritella sp. PE36]
 gi|149805235|gb|EDM65252.1| flagellar basal body protein [Moritella sp. PE36]
          Length = 131

 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 20/118 (16%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R ++++ NIANA T G       ++ + +SF++ +  +     +    + S   E    G
Sbjct: 22  RAEVLASNIANADTPG-------FKARDLSFKDALASA----TQGSSFNLSKTSERHISG 70

Query: 81  HPVANASGIVKYPN---------VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                +    + PN         V+V  E  +  + +  Y A+L  +      M   +
Sbjct: 71  GRSMASDLQYRIPNQPDTGDGNTVDVQTERTNFMQNSMEYQASLSFLSSKMQTMRKAI 128


>gi|62317100|ref|YP_222953.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 1 str.
           9-941]
 gi|83269092|ref|YP_418383.1| flagellar basal body rod protein FlgB [Brucella melitensis biovar
           Abortus 2308]
 gi|189022365|ref|YP_001932106.1| flagellar basal body rod protein FlgB [Brucella abortus S19]
 gi|237816662|ref|ZP_04595654.1| flagellar basal-body rod protein FlgB [Brucella abortus str. 2308
           A]
 gi|254691415|ref|ZP_05154669.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 6 str.
           870]
 gi|254695287|ref|ZP_05157115.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698385|ref|ZP_05160213.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731830|ref|ZP_05190408.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 4 str.
           292]
 gi|256256601|ref|ZP_05462137.1| flagellar basal body rod protein FlgB [Brucella abortus bv. 9 str.
           C68]
 gi|260544338|ref|ZP_05820159.1| flagellar basal-body rod protein FlgB [Brucella abortus NCTC 8038]
 gi|260757029|ref|ZP_05869377.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 6 str.
           870]
 gi|260759599|ref|ZP_05871947.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 4 str.
           292]
 gi|260762843|ref|ZP_05875175.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882839|ref|ZP_05894453.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 9 str.
           C68]
 gi|261215656|ref|ZP_05929937.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 3 str.
           Tulya]
 gi|297249957|ref|ZP_06933658.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 5 str.
           B3196]
 gi|62197293|gb|AAX75592.1| FlgB, flagellar basal-body rod protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82939366|emb|CAJ12314.1| Flagellar basal-body rod protein FlgB [Brucella melitensis biovar
           Abortus 2308]
 gi|189020939|gb|ACD73660.1| Flagellar basal-body rod protein FlgB [Brucella abortus S19]
 gi|237787475|gb|EEP61691.1| flagellar basal-body rod protein FlgB [Brucella abortus str. 2308
           A]
 gi|260097609|gb|EEW81483.1| flagellar basal-body rod protein FlgB [Brucella abortus NCTC 8038]
 gi|260669917|gb|EEX56857.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 4 str.
           292]
 gi|260673264|gb|EEX60085.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677137|gb|EEX63958.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 6 str.
           870]
 gi|260872367|gb|EEX79436.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 9 str.
           C68]
 gi|260917263|gb|EEX84124.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 3 str.
           Tulya]
 gi|297173826|gb|EFH33190.1| flagellar basal-body rod protein FlgB [Brucella abortus bv. 5 str.
           B3196]
          Length = 126

 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 43/128 (33%), Gaps = 36/128 (28%)

Query: 17  VQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVRVKKIGVDQSTF 73
            Q  S R   ++ N+ANA T    P    +R + +  F +V+  +               
Sbjct: 14  AQWLSVRQATVAGNVANADT----PD---FRARDVQPFADVLDKTQLTMTAT-------- 58

Query: 74  VEEFDPGHPVANASGIVK---YPN-----------VNVLVETADMRETNRLYMANLQTIK 119
                P H  A A GI      P+           V+V  E     E  R Y  N   +K
Sbjct: 59  ----SPLHLEAEADGIAATRLRPDDVTEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVK 114

Query: 120 QSHDMMTT 127
             H MM +
Sbjct: 115 AFHRMMLS 122


>gi|90423518|ref|YP_531888.1| flagellar hook-associated protein [Rhodopseudomonas palustris
           BisB18]
 gi|90105532|gb|ABD87569.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
           BisB18]
          Length = 618

 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 16/37 (43%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E + +      Y AN + +    +M+   + +
Sbjct: 582 VNIDEEMSRLMSLQTAYAANARVLSAVREMLDVLMKI 618



 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 7/63 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  +   A +GL      ++++S+N+ NA T G       Y R+T++      G+  V V
Sbjct: 2  LTTAFSTAVAGLEAAQKAIRVVSQNVGNAGTAG-------YVRRTVTTVASGPGNSSVAV 54

Query: 64 KKI 66
            +
Sbjct: 55 GTV 57


>gi|300716215|ref|YP_003741018.1| flagellar basal-body rod protein [Erwinia billingiae Eb661]
 gi|299062051|emb|CAX59167.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661]
          Length = 137

 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 21/123 (17%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQSTF 73
           L  Q    +I++ NIANA T G       Y+ + I F   M+      R +  G+  +  
Sbjct: 18  LRAQRQ--EILASNIANADTPG-------YQARDIDFASQMNKVMEQGRAEGSGLSLAVT 68

Query: 74  VEEFDPGHPVANA--SGIVKYPN--------VNVLVETADMRETNRLYMANLQTIK-QSH 122
                P   +  A    + + P+        V++  E     + +  Y  +L  I  Q  
Sbjct: 69  SARHIPAETLQPASIDLMYRVPDQPAMDGNTVDMDRERTQFADNSLKYQTDLTVISGQIK 128

Query: 123 DMM 125
            MM
Sbjct: 129 SMM 131


>gi|238028842|ref|YP_002913073.1| flagellar hook-associated protein FlgK [Burkholderia glumae BGR1]
 gi|237878036|gb|ACR30369.1| Flagellar hook-associated protein [Burkholderia glumae BGR1]
          Length = 664

 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E  ++ +  ++Y AN + I+ +  + +T L +
Sbjct: 624 SGVNQDEEAVNLMQYQQMYQANAKVIQTASTLFSTLLGI 662


>gi|188576757|ref|YP_001913686.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188576949|ref|YP_001913878.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521209|gb|ACD59154.1| flagellar basal-body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521401|gb|ACD59346.1| flagellar basal-body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 230

 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 181 SGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 227


>gi|262652|gb|AAB24738.1| flagellar basal body proximal rod protein [Caulobacter vibrioides]
          Length = 248

 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 19/40 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            G+++  NV  ++E   + E  R Y +  + +  + ++  
Sbjct: 196 QGMLEASNVQPVIEITKLIEIQRAYESVAKMMDNTAELSR 235



 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          GL+ Q      + I++ NIANA TTG        R +     + + GS  V+
Sbjct: 8  GLSRQMTVRRELDIVANNIANANTTGFKVEDLMVRTEQAKPAKTLDGSSPVK 59


>gi|58039490|ref|YP_191454.1| flagellar hook protein FlgE [Gluconobacter oxydans 621H]
 gi|58001904|gb|AAW60798.1| Flagellar hook protein FlgE [Gluconobacter oxydans 621H]
          Length = 411

 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 7/52 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE 52
          M  +I + H A SGL  QS     +S NIAN++TTG       Y+  T SFE
Sbjct: 1  MSSIINAVHTAVSGLNAQSHAFTDLSNNIANSQTTG-------YKASTTSFE 45


>gi|292900255|ref|YP_003539624.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291200103|emb|CBJ47229.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
          Length = 135

 Score = 36.8 bits (85), Expect = 0.90,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 33/132 (25%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGVRVKK 65
            L++ S R ++++ NIANA T G       Y  + I F + +  +          V +  
Sbjct: 15  ALSLLSRRQEVLASNIANADTPG-------YLARDIDFSQQLKNTLANQSMAKSPVSLSL 67

Query: 66  IGV----------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                        D +  +    P  P A+ +       V++  E   M +TN  Y + L
Sbjct: 68  TAEKHIEGKGRPFDDANLLYR-TPDQPSADGN------TVDMDRERIGMADTNVKYQSGL 120

Query: 116 QTIKQ-SHDMMT 126
             +      MM+
Sbjct: 121 TFLGADIKKMMS 132


>gi|284007169|emb|CBA72453.1| flagellar hook-associated protein FlgK [Arsenophonus nasoniae]
          Length = 545

 Score = 36.8 bits (85), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 9/74 (12%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE--VMHGSGGVRV 63
          +  + A SGL V    +  I  NIAN++        + Y R+T +       +   GV+V
Sbjct: 4  SLMNTAMSGLKVAQTALSTIGSNIANSKV-------ESYHRQTTTLATDGSNNNINGVKV 56

Query: 64 KKIGVDQSTFVEEF 77
            I  +   F+   
Sbjct: 57 SGIQREYDEFINAH 70


>gi|260568519|ref|ZP_05838988.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 4 str. 40]
 gi|260155184|gb|EEW90265.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 4 str. 40]
          Length = 126

 Score = 36.8 bits (85), Expect = 0.90,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 44/128 (34%), Gaps = 36/128 (28%)

Query: 17  VQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVRVKKIGVDQSTF 73
            Q  S R   ++ N+ANA T    P    +R + +  F +V+      + +      S  
Sbjct: 14  AQWLSVRQATVAGNVANANT----PD---FRARDVQPFADVLD-----KTQLTMTATSPL 61

Query: 74  VEEFDPGHPVANASGIVK---YPN-----------VNVLVETADMRETNRLYMANLQTIK 119
             E       A A GI      P+           V+V  E     E  R Y  N   +K
Sbjct: 62  RLE-------AEADGIAATRLRPDDVTEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVK 114

Query: 120 QSHDMMTT 127
             H MM +
Sbjct: 115 AFHRMMLS 122


>gi|317047688|ref|YP_004115336.1| flagellar basal-body rod protein FlgB [Pantoea sp. At-9b]
 gi|316949305|gb|ADU68780.1| flagellar basal-body rod protein FlgB [Pantoea sp. At-9b]
          Length = 137

 Score = 36.8 bits (85), Expect = 0.90,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 51/143 (35%), Gaps = 31/143 (21%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
           D L A+       L +++ R +I++ NIANA T G       Y+ + I F   +      
Sbjct: 3   DKLDAALRFGTEALNLRAERQEILASNIANADTPG-------YQARDIDFASQLSKVMEN 55

Query: 58  --------SGGVRVKKIGVDQSTFVEEFD-----PGHPVANASGIVKYPNVNVLVETADM 104
                   +  V   +    Q+      D     P  P A+ +       V++  E    
Sbjct: 56  GRSEGSSLALNVTSARHIEAQTNSQPSMDLLYRIPDQPAADGN------TVDMDRERTQF 109

Query: 105 RETNRLYMANLQTI-KQSHDMMT 126
            + +  Y  +L  I  Q   MM+
Sbjct: 110 ADNSLKYQTDLTLISSQIKGMMS 132


>gi|253990126|ref|YP_003041482.1| flagellar basal-body rod protein flgf [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253781576|emb|CAQ84739.1| flagellar basal-body rod protein flgf (putative proximal rod
           protein) [Photorhabdus asymbiotica]
          Length = 251

 Score = 36.8 bits (85), Expect = 0.90,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G ++  NVN +     M +  R +   ++ I  S +       LL
Sbjct: 204 GTLEGSNVNPMESMVSMIDNARRFEMQMKVIHSSDENAQRANQLL 248


>gi|268317787|ref|YP_003291506.1| flagellar hook-associated protein FlgK [Rhodothermus marinus DSM
           4252]
 gi|262335321|gb|ACY49118.1| flagellar hook-associated protein FlgK [Rhodothermus marinus DSM
           4252]
          Length = 464

 Score = 36.8 bits (85), Expect = 0.90,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 3/52 (5%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            H  A   G++    V++  E  +M    + Y A  + +  +  MM T L+L
Sbjct: 416 DHLDALQQGVM---GVSLDEELTNMIRFQQAYAATARVLDTARSMMDTLLNL 464


>gi|77359728|ref|YP_339303.1| flagellar hook-associated [Pseudoalteromonas haloplanktis TAC125]
 gi|76874639|emb|CAI85860.1| putative flagellar hook-associated [Pseudoalteromonas
          haloplanktis TAC125]
          Length = 670

 Score = 36.8 bits (85), Expect = 0.90,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG 36
              +IANSG+   +  +Q  S+NIAN  T G
Sbjct: 3  FNLLNIANSGIRANTDLLQTTSKNIANVNTDG 34



 Score = 33.7 bits (77), Expect = 8.5,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 VN+  E A++    + Y A+ Q +  +  +  T L   R
Sbjct: 626 YESLSGVNLDEEAANLLRFQQSYAASAQVLSAARSIFDTLLSATR 670


>gi|163742543|ref|ZP_02149929.1| flagellar basal-body rod protein FlgF [Phaeobacter gallaeciensis
          2.10]
 gi|161384128|gb|EDQ08511.1| flagellar basal-body rod protein FlgF [Phaeobacter gallaeciensis
          2.10]
          Length = 238

 Score = 36.8 bits (85), Expect = 0.92,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 7/39 (17%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M++++ NIAN+ TTG       YR + I F E +  + G
Sbjct: 19 MRVVANNIANSATTG-------YRAEGIIFSEFIQSAPG 50



 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            G ++  NVN + + A M E  R Y      ++     +   +
Sbjct: 190 QGFLEGSNVNAISQLARMVEIQRAYEMGQSFLETEDQRVRNAI 232


>gi|153001466|ref|YP_001367147.1| flagellar hook-associated protein FlgK [Shewanella baltica OS185]
 gi|151366084|gb|ABS09084.1| flagellar hook-associated protein FlgK [Shewanella baltica OS185]
          Length = 641

 Score = 36.8 bits (85), Expect = 0.92,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    +++ + S NIANA T G       Y R+  +   +     G      G
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAG-------YHRQVATQSTLESQRLGNSFYGTG 58

Query: 68 VDQSTFVEEFD 78
             +     ++
Sbjct: 59 TYVNDVKRIYN 69


>gi|319790356|ref|YP_004151989.1| flagellar hook-associated protein FlgK [Thermovibrio ammonificans
          HB-1]
 gi|317114858|gb|ADU97348.1| flagellar hook-associated protein FlgK [Thermovibrio ammonificans
          HB-1]
          Length = 449

 Score = 36.8 bits (85), Expect = 0.92,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 9/65 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  +  +A+  L  Q   +   + N++N  T G       Y R+   F ++    GGV V
Sbjct: 3  LFGALSLASQALLSQQIAVNTTNRNLSNVNTDG-------YSREEPVFADIP--GGGVTV 53

Query: 64 KKIGV 68
            +  
Sbjct: 54 ATLRR 58



 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +   VN   E  ++    R Y A  + +  + +++ T L++
Sbjct: 407 ELSGVNTDEELVNLTRYQRAYQAAARVVTVTDELLQTILNM 447


>gi|254434266|ref|ZP_05047774.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani
          AFC27]
 gi|207090599|gb|EDZ67870.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani
          AFC27]
          Length = 148

 Score = 36.8 bits (85), Expect = 0.92,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++  I    + + S R ++++ N+AN    GDTPG   Y+ + I F+  +  + G
Sbjct: 24 SALGIYPQAVTLGSRRAEVLAANLAN----GDTPG---YKARDIDFKAALQQAQG 71


>gi|206895667|ref|YP_002246664.1| flagellar hook-basal body complex protein, putative
           [Coprothermobacter proteolyticus DSM 5265]
 gi|206738284|gb|ACI17362.1| flagellar hook-basal body complex protein, putative
           [Coprothermobacter proteolyticus DSM 5265]
          Length = 227

 Score = 36.8 bits (85), Expect = 0.92,   Method: Composition-based stats.
 Identities = 5/44 (11%), Positives = 21/44 (47%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            ++  NV+ + +   +    R Y +N++ ++     +   ++++
Sbjct: 183 YLETSNVDEIGQVTALMTILRHYQSNVKVVQAEDAALAKIINIM 226


>gi|330447904|ref|ZP_08311552.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492095|dbj|GAA06049.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 243

 Score = 36.8 bits (85), Expect = 0.93,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           DP   VA  +G ++  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 188 DPT--VAITAGHLEGSNVSAINELVSVMSLTRNFEMQVRMMKTAETLAQAGTRLM 240


>gi|294501824|ref|YP_003565524.1| flagellar hook-associated protein FlgK [Bacillus megaterium QM
          B1551]
 gi|294351761|gb|ADE72090.1| flagellar hook-associated protein FlgK [Bacillus megaterium QM
          B1551]
          Length = 507

 Score = 36.8 bits (85), Expect = 0.93,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 7/53 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M        +A  G+  Q A +  I  N++NA T G       Y R+ +S E 
Sbjct: 1  MSSTFHGLQVAKRGMDAQQAALYTIGHNVSNANTPG-------YTRQRVSLET 46


>gi|254780685|ref|YP_003065098.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter
          asiaticus str. psy62]
 gi|254040362|gb|ACT57158.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter
          asiaticus str. psy62]
          Length = 243

 Score = 36.8 bits (85), Expect = 0.93,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 13/57 (22%)

Query: 4  LIASAHIANSGLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +  S +I   GLA Q     R+  +++N++N  T G       +R   + F EV+  
Sbjct: 1  MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGA 47


>gi|205373368|ref|ZP_03226172.1| flagellar basal body rod protein FlgB [Bacillus coahuilensis m4-4]
          Length = 133

 Score = 36.8 bits (85), Expect = 0.93,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 23/114 (20%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD-QSTFVEEFDPGH- 81
            IS+NIAN  T         Y+ K + FE     S    V  I  +  S     F P   
Sbjct: 25  AISQNIANVDTPN-------YKAKDVKFESYFKKS----VADIQANVTSDKHMSFKPTSA 73

Query: 82  ------PVANASGIVKYPN---VNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
                 P +++   + + N   V+V  E AD+      Y + +Q +   + M+T
Sbjct: 74  TGTSAAPYSSSD-FIYHHNGNGVDVDKEMADLATNQIYYNSLIQQLNHKYSMIT 126


>gi|83647167|ref|YP_435602.1| flagellar hook-associated protein [Hahella chejuensis KCTC 2396]
 gi|83635210|gb|ABC31177.1| Flagellar hook-associated protein [Hahella chejuensis KCTC 2396]
          Length = 892

 Score = 36.8 bits (85), Expect = 0.93,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 25/76 (32%), Gaps = 14/76 (18%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
              +I  +GL      +     N++NA T G       Y R+ + FE            
Sbjct: 3  TNVINIGLTGLKASQTALATTGNNVSNANTEG-------YSRQRVEFEATPSQFIGAGYL 55

Query: 58 SGGVRVKKIGVDQSTF 73
            GV V  I    + F
Sbjct: 56 GTGVGVADISRMTNQF 71


>gi|34558103|ref|NP_907918.1| flagellar basal-body rod protein FlgG [Wolinella succinogenes DSM
          1740]
 gi|34483821|emb|CAE10818.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGG [Wolinella succinogenes]
          Length = 277

 Score = 36.8 bits (85), Expect = 0.93,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          +  G+  Q  R+ +IS N+ANA TTG       ++R  + 
Sbjct: 8  STGGIVTQFHRLDMISNNLANANTTG-------FKRDDVV 40



 Score = 33.7 bits (77), Expect = 7.8,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 87  SGIVKYPNVNVLVETADMRETNR 109
            G ++  NVN + E   + ETNR
Sbjct: 227 QGYLEKSNVNAVWEMTGLIETNR 249


>gi|146296277|ref|YP_001180048.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          saccharolyticus DSM 8903]
 gi|145409853|gb|ABP66857.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          saccharolyticus DSM 8903]
          Length = 137

 Score = 36.8 bits (85), Expect = 0.94,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 7/38 (18%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
           R ++IS NIANA T G       Y+ K ++F+  +  
Sbjct: 20 KRNEVISNNIANADTPG-------YKAKDLNFKAFLQA 50


>gi|110632662|ref|YP_672870.1| flagellar basal body rod protein FlgF [Mesorhizobium sp. BNC1]
 gi|110283646|gb|ABG61705.1| flagellar basal body rod protein [Chelativorans sp. BNC1]
          Length = 239

 Score = 36.8 bits (85), Expect = 0.94,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D         P   V  A G ++  NVN + E   + +  R +      ++ S   M   
Sbjct: 176 DTRPQPVVDQPD--VGIAQGFLEDSNVNPVNEMMRLIQVQRTFEQVTALMRDSDTSMKDA 233

Query: 129 LD 130
           + 
Sbjct: 234 IQ 235


>gi|312164118|gb|ADQ38281.1| flagellar hook protein [Azospirillum brasilense]
          Length = 291

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          GL  Q+  +  IS NIANA T+G
Sbjct: 13 GLTAQNRALGTISNNIANASTSG 35


>gi|296103614|ref|YP_003613760.1| Flagellar basal-body rod protein FlgB [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
 gi|295058073|gb|ADF62811.1| Flagellar basal-body rod protein FlgB [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
          Length = 136

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+ L  +       L + S R  I++ NIANA T G       Y+ + I F + +  +
Sbjct: 1  MNKLDDAFRFQQQALGLLSRRQDILASNIANADTPG-------YKARDIDFTQQLKAA 51


>gi|295707173|ref|YP_003600248.1| flagellar hook-associated protein FlgK [Bacillus megaterium DSM
          319]
 gi|294804832|gb|ADF41898.1| flagellar hook-associated protein FlgK [Bacillus megaterium DSM
          319]
          Length = 507

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 7/53 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M        +A  G+  Q A +  I  N++NA T G       Y R+ +S E 
Sbjct: 1  MSSTFHGLQVAKRGMDAQQAALYTIGHNVSNANTPG-------YTRQRVSLET 46


>gi|294679036|ref|YP_003579651.1| flagellar basal-body rod protein; FlgB [Rhodobacter capsulatus SB
           1003]
 gi|294477856|gb|ADE87244.1| flagellar basal-body rod protein; FlgB [Rhodobacter capsulatus SB
           1003]
          Length = 128

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 39/125 (31%), Gaps = 43/125 (34%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMH---------------GSGGVRV 63
            R  +++ N+ANA T G       YR K +  F +                  G+ G   
Sbjct: 20  LREGVVATNVANADTPG-------YRAKDVVSFADSYRTEHAQPMRATRPGHLGANGSYT 72

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL-------YMANLQ 116
             +  D +      D   P  N         V++  E     +  R        Y ++L 
Sbjct: 73  VSVIEDPAP-----DSSSPDGNG--------VSIEDEMVKAVDVKRQHDRALAIYKSSLN 119

Query: 117 TIKQS 121
            ++ S
Sbjct: 120 VLRAS 124


>gi|294635611|ref|ZP_06714088.1| flagellar basal-body rod protein FlgF [Edwardsiella tarda ATCC
           23685]
 gi|291091063|gb|EFE23624.1| flagellar basal-body rod protein FlgF [Edwardsiella tarda ATCC
           23685]
          Length = 251

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    +M    R +   ++ I+   D       LL
Sbjct: 204 GVLEGSNVQPVEAMVNMITNARRFEMQMKVIRSVDDNEQKANQLL 248


>gi|239907786|ref|YP_002954527.1| flagellar hook-associated protein 1 [Desulfovibrio magneticus RS-1]
 gi|239797652|dbj|BAH76641.1| flagellar hook-associated protein 1 [Desulfovibrio magneticus RS-1]
          Length = 710

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 63  VKKIGVDQST--FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V KIG D +   +   +            +    VN+  E  +M +    Y A  + +  
Sbjct: 638 VSKIGSDTAAASYQATYQAALAAELNEQQLSTSGVNLDEELTNMIKFQHSYQAAAKLVST 697

Query: 121 SHDMMTTTLDL 131
           ++ M  T L L
Sbjct: 698 ANSMFETVLGL 708


>gi|258514000|ref|YP_003190222.1| flagellar basal-body rod protein FlgB [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777705|gb|ACV61599.1| flagellar basal-body rod protein FlgB [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 134

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 26/120 (21%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            +   S R ++I+ NIAN  T G       +++ +++FE ++  +  +   +I +  S  
Sbjct: 15  AIDAGSLRQRVIANNIANINTPG-------FKKSSVAFESILKKN--LNTGRIPLKYSDS 65

Query: 74  VE--------EFDPGHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                       +P     N     + G     NV+V  E   +      Y A++Q +  
Sbjct: 66  RHFGAADSLDAINPTVVKENTTSMRSDGN----NVDVEQEMVRLVLNTINYNADIQELNN 121


>gi|261344141|ref|ZP_05971785.1| flagellar basal-body rod protein FlgF [Providencia rustigianii DSM
           4541]
 gi|282567733|gb|EFB73268.1| flagellar basal-body rod protein FlgF [Providencia rustigianii DSM
           4541]
          Length = 251

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN       M    R +   ++ I  + +       LL
Sbjct: 203 SGVIEGSNVNAAEAMVSMIANARHFEMQMKVIHSADENAQRANQLL 248


>gi|225375213|ref|ZP_03752434.1| hypothetical protein ROSEINA2194_00838 [Roseburia inulinivorans
          DSM 16841]
 gi|225212880|gb|EEG95234.1| hypothetical protein ROSEINA2194_00838 [Roseburia inulinivorans
          DSM 16841]
          Length = 610

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANART 34
          M        IA+SGL+   A +   + NI+N +T
Sbjct: 1  MPSQFFGLTIASSGLSAYQAALNTTANNISNEQT 34


>gi|161485722|ref|NP_660672.3| flagellar basal body rod protein FlgF [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008455|sp|Q8K9K5|FLGF_BUCAP RecName: Full=Flagellar basal-body rod protein flgF
 gi|21623236|gb|AAM67883.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 249

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           +++  NVN      DM    R +  N++ I 
Sbjct: 202 MLEASNVNPTKNMIDMISNARQFEMNMKIIS 232


>gi|88799018|ref|ZP_01114599.1| Flagellar basal body protein [Reinekea sp. MED297]
 gi|88778245|gb|EAR09439.1| Flagellar basal body protein [Reinekea sp. MED297]
          Length = 132

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 22/121 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
              S  I ++ L V+S R  +++ N+ANA T G       ++ + + F+ ++ G   V  
Sbjct: 6   FENSLGIHDNALLVRSERSSVLANNLANADTPG-------FKARDMDFKAILRGE--VE- 55

Query: 64  KKIGVDQSTFVEEFDPG-----------HPVANA-SGIVKYPNVNVLVETADMRETNRLY 111
           K+  ++ +       PG           HP+  +  G     NV     T +    N  +
Sbjct: 56  KQQSLEMAETNSRHIPGRQHEGWEKLYRHPLQPSIDGNTVEENVENKEFTENAMSYNASF 115

Query: 112 M 112
            
Sbjct: 116 E 116


>gi|114320054|ref|YP_741737.1| flagellar basal-body rod protein FlgB [Alkalilimnicola ehrlichii
          MLHE-1]
 gi|114226448|gb|ABI56247.1| flagellar basal-body rod protein FlgB [Alkalilimnicola ehrlichii
          MLHE-1]
          Length = 134

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 9/46 (19%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L  + +++  ++ NIANA T         Y+ + + F+  M  + G
Sbjct: 18 LRAERSQL--LASNIANADTPH-------YKAQDMDFQAAMRAAEG 54


>gi|260886628|ref|ZP_05897891.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
           35185]
 gi|260863771|gb|EEX78271.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
           35185]
          Length = 142

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 44/121 (36%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------MHGSGG 60
           +  +   G+   + R ++IS NIAN  T         +++  + FE++      +   GG
Sbjct: 15  ALDVMQRGMGAANLRQEVISHNIANVNTPN-------FKKSNVVFEDLLAKELDLDAEGG 67

Query: 61  VRV-----------------KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
           +++                  KI +D+S+    +D               NV++ VE A 
Sbjct: 68  LKIVRTHDRHMPISFRGRALAKIELDKSSS-MRYDNN-------------NVDIDVEMAS 113

Query: 104 M 104
           +
Sbjct: 114 L 114


>gi|256376483|ref|YP_003100143.1| flagellar hook-associated protein FlgK [Actinosynnema mirum DSM
           43827]
 gi|255920786|gb|ACU36297.1| flagellar hook-associated protein FlgK [Actinosynnema mirum DSM
           43827]
          Length = 459

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 15/36 (41%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           VN+  E   M    R Y A  + +     M+ T ++
Sbjct: 420 VNLDEELTSMLTYQRSYEAAARVMSAVDSMLDTLIN 455



 Score = 34.5 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 25/80 (31%), Gaps = 19/80 (23%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANART------------TGDTPGSDPYRRKT 48
          M    +    A  G+      +++  +NIANART             G T  +  Y    
Sbjct: 1  MSSTFSGITSALGGMQAARRGLEVAGQNIANARTEGYSRQRVETAAVGGTANAAFY---- 56

Query: 49 ISFEEVMHGSGGVRVKKIGV 68
                   +G V V  I  
Sbjct: 57 ---ATPPATAGSVEVTGITR 73


>gi|218135315|ref|ZP_03464119.1| hypothetical protein BACPEC_03220 [Bacteroides pectinophilus ATCC
          43243]
 gi|217990700|gb|EEC56711.1| hypothetical protein BACPEC_03220 [Bacteroides pectinophilus ATCC
          43243]
          Length = 606

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 14/84 (16%)

Query: 1  MDYLIASAHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M   +   ++ +SGL + Q+A +   + N+AN    G       Y R+ ++     +   
Sbjct: 1  MANGMTGLYVGSSGLRSAQTA-LNTTAHNLANVNVKG-------YTRQQVALSSAEYFKI 52

Query: 60 GVRVKK-----IGVDQSTFVEEFD 78
          G  + +     +GVD        D
Sbjct: 53 GQTITQDKSYGVGVDTLAIRRVRD 76


>gi|160876197|ref|YP_001555513.1| flagellar hook-associated protein FlgK [Shewanella baltica OS195]
 gi|160861719|gb|ABX50253.1| flagellar hook-associated protein FlgK [Shewanella baltica OS195]
 gi|315268387|gb|ADT95240.1| flagellar hook-associated protein FlgK [Shewanella baltica OS678]
          Length = 641

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    +++ + S NIANA T G       Y R+  +   +     G      G
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAG-------YHRQVATQSTLESQRLGNSFYGTG 58

Query: 68 VDQSTFVEEFD 78
             +     ++
Sbjct: 59 TYVNDVKRIYN 69


>gi|331007438|ref|ZP_08330615.1| Flagellar basal-body rod protein flgF [gamma proteobacterium
           IMCC1989]
 gi|330418745|gb|EGG93234.1| Flagellar basal-body rod protein flgF [gamma proteobacterium
           IMCC1989]
          Length = 246

 Score = 36.8 bits (85), Expect = 0.96,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NVN + E   +    R Y  +++ +K + +    +  LL+
Sbjct: 197 SGFLEGSNVNPVNELTHILTLARQYEMSIKLMKTTEENSQASARLLQ 243


>gi|307131612|ref|YP_003883628.1| flagellar basal-body rod protein flgB [Dickeya dadantii 3937]
 gi|306529141|gb|ADM99071.1| Flagellar basal-body rod protein flgB [Dickeya dadantii 3937]
          Length = 139

 Score = 36.8 bits (85), Expect = 0.96,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------GSGGVRVK---- 64
           L  Q    +I++ NIANA T G       Y+ + I F   ++       + G  V     
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFASELNKVMEQGRASGQSVSLSLT 68

Query: 65  ------KIGVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                    V        +  P  P  + +       V++  E  +  + +  Y ++L  
Sbjct: 69  SARHIPAQTVQPPELDLLYRVPTQPALDGN------TVDMDRERTNFADNSLKYQSSLTL 122

Query: 118 I-KQSHDMMT 126
           I  Q   MM+
Sbjct: 123 IGGQIKGMMS 132


>gi|285018722|ref|YP_003376433.1| hypothetical protein XALc_1955 [Xanthomonas albilineans GPE PC73]
 gi|283473940|emb|CBA16441.1| hypothetical protein XALc_1955 [Xanthomonas albilineans]
          Length = 102

 Score = 36.8 bits (85), Expect = 0.96,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 31/120 (25%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           SG+   ++ +Q+ + NIAN  T G       ++R      +     GGV V ++ V    
Sbjct: 13  SGMRAAASGLQVRANNIANLATDG-------FQRAVPV--DHESAGGGV-VSQVQV---- 58

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                      A+  G       +++ +          + AN + ++ + D +   LD+L
Sbjct: 59  -----------ADGQGS------DMVDDMVGGLSARNAFQANARVLRAADDSLGHLLDVL 101


>gi|83944174|ref|ZP_00956630.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
 gi|83955125|ref|ZP_00963781.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
 gi|83840454|gb|EAP79627.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
 gi|83845041|gb|EAP82922.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
          Length = 117

 Score = 36.8 bits (85), Expect = 0.96,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 20/108 (18%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTI-SFEEVMHGSG-GVRVKKIGVDQSTFVEEF 77
            R  ++SENIAN+   G       YR + + SF   +  +G   R+++  V ++  +   
Sbjct: 21  TRQNVVSENIANSDVAG-------YRAQDVQSFASYLEDAGRSQRLQEAEVVEARVLG-- 71

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                 A A+G     NVN+  +  +    +  +       +++H+M+
Sbjct: 72  -----GATATGN----NVNLEEQLVEANSASGQFQMAASLYRKAHEMV 110


>gi|304409972|ref|ZP_07391591.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183]
 gi|307302315|ref|ZP_07582073.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175]
 gi|304351381|gb|EFM15780.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183]
 gi|306914353|gb|EFN44774.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175]
          Length = 641

 Score = 36.8 bits (85), Expect = 0.97,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    +++ + S NIANA T G       Y R+  +   +     G      G
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAG-------YHRQVATQSTLESQRLGNSFYGTG 58

Query: 68 VDQSTFVEEFD 78
             +     ++
Sbjct: 59 TYVNDVKRIYN 69


>gi|217972604|ref|YP_002357355.1| flagellar hook-associated protein FlgK [Shewanella baltica OS223]
 gi|217497739|gb|ACK45932.1| flagellar hook-associated protein FlgK [Shewanella baltica OS223]
          Length = 641

 Score = 36.8 bits (85), Expect = 0.97,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    +++ + S NIANA T G       Y R+  +   +     G      G
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAG-------YHRQVATQSTLESQRLGNSFYGTG 58

Query: 68 VDQSTFVEEFD 78
             +     ++
Sbjct: 59 TYVNDVKRIYN 69


>gi|126175140|ref|YP_001051289.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155]
 gi|125998345|gb|ABN62420.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155]
          Length = 641

 Score = 36.8 bits (85), Expect = 0.97,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    +++ + S NIANA T G       Y R+  +   +     G      G
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAG-------YHRQVATQSTLESQRLGNSFYGTG 58

Query: 68 VDQSTFVEEFD 78
             +     ++
Sbjct: 59 TYVNDVKRIYN 69


>gi|325109020|ref|YP_004270088.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
           5305]
 gi|324969288|gb|ADY60066.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
           5305]
          Length = 572

 Score = 36.8 bits (85), Expect = 0.99,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  N ++     D+   +  Y  N + I     ++   L L R
Sbjct: 526 AGAIELSNTDIGRNLVDLIVASTNYRGNARVIDSVQQLVDELLLLGR 572


>gi|310816851|ref|YP_003964815.1| flagellar hook-associated protein [Ketogulonicigenium vulgare
          Y25]
 gi|308755586|gb|ADO43515.1| flagellar hook-associated protein [Ketogulonicigenium vulgare
          Y25]
          Length = 468

 Score = 36.8 bits (85), Expect = 0.99,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 9/67 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGV 61
          L  S   A SGLA  S + ++IS NI+NA T G       Y R+ ++      G    GV
Sbjct: 3  LTYSLGNALSGLAAVSRQTEVISSNISNALTEG-------YARREVALSASSIGGRGAGV 55

Query: 62 RVKKIGV 68
           V  +  
Sbjct: 56 TVDGVTR 62


>gi|307731356|ref|YP_003908580.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1003]
 gi|307585891|gb|ADN59289.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1003]
          Length = 657

 Score = 36.8 bits (85), Expect = 0.99,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++ +  +LY AN + I+ +  +  T L + +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLLGIFQ 657


>gi|117919778|ref|YP_868970.1| flagellar hook-associated protein FlgK [Shewanella sp. ANA-3]
 gi|117612110|gb|ABK47564.1| flagellar hook-associated protein FlgK [Shewanella sp. ANA-3]
          Length = 641

 Score = 36.8 bits (85), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    +++ + S NIANA T G       Y R+  +   +     G      G
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAG-------YHRQVATQSTLESQRLGNSFYGTG 58

Query: 68 VDQSTFVEEFD 78
                   ++
Sbjct: 59 TYVDDVKRIYN 69


>gi|23015641|ref|ZP_00055411.1| COG1749: Flagellar hook protein FlgE [Magnetospirillum
          magnetotacticum MS-1]
          Length = 804

 Score = 36.8 bits (85), Expect = 0.99,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 15/58 (25%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------HGSGGVR 62
          SGLA QS+ M  IS+NI N  TTG       Y+   ++F+ ++        +  GGV+
Sbjct: 12 SGLASQSSAMGAISDNITNVNTTG-------YKGAKVNFQTLVTKQVSLTSYSPGGVQ 62


>gi|323136553|ref|ZP_08071634.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242]
 gi|322397870|gb|EFY00391.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242]
          Length = 240

 Score = 36.8 bits (85), Expect = 1.00,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYM---ANLQTIKQSHDMMTTTL 129
           A G ++  NVN + E   +   +R +    A+   +  S      TL
Sbjct: 191 AQGHLENANVNPVSEITKLIMAHRSFESASASYDMMDNSQRAAVRTL 237


>gi|224825778|ref|ZP_03698882.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
 gi|224602002|gb|EEG08181.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
          Length = 241

 Score = 36.8 bits (85), Expect = 1.00,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+ + E       NR +   ++    ++DM+     L+R
Sbjct: 196 HLEQSNVSAVEEMIATMSLNRGFEMQMKMFNAANDMVEAGNRLVR 240


>gi|85858814|ref|YP_461016.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
 gi|85721905|gb|ABC76848.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
          Length = 128

 Score = 36.8 bits (85), Expect = 1.00,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 27/115 (23%)

Query: 1   MDYLIA-SAHIANSGLAVQS-ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           MD+L + +  I  SG+      R +II  NIAN  +    P    Y+ K   F+  +  +
Sbjct: 1   MDFLFSKTIGI-LSGMLGFRSQRNKIILSNIANMDS----PD---YKPKDYVFKRDLSRA 52

Query: 59  GGVRVKKIGVDQSTFVE-----EFDPG--HPVANASGIV--KYPNVNVLVETADM 104
                     D+          +  P   + +++    V     NVN+  E   +
Sbjct: 53  --------VADRGQLTLLKTDGKHLPADLNEISDDDFEVVETGKNVNMDTEMTHL 99


>gi|94312675|ref|YP_585884.1| flagellar hook-filament junction protein [Cupriavidus metallidurans
           CH34]
 gi|93356527|gb|ABF10615.1| flagellar hook-filament junction protein [Cupriavidus metallidurans
           CH34]
          Length = 631

 Score = 36.8 bits (85), Expect = 1.00,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 22/40 (55%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             VN+  ET ++ +  +LY AN + I+ +  ++ T L + 
Sbjct: 592 SGVNMDEETVNLLKFQQLYQANAKVIQTASTIIDTLLSIG 631


>gi|212709498|ref|ZP_03317626.1| hypothetical protein PROVALCAL_00540 [Providencia alcalifaciens
          DSM 30120]
 gi|212687836|gb|EEB47364.1| hypothetical protein PROVALCAL_00540 [Providencia alcalifaciens
          DSM 30120]
          Length = 546

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          L    + A SG+      + +IS N+ANA       G   Y R++  F E
Sbjct: 2  LNNVMNNALSGVNAAQGGLSVISNNLANA-------GVGYYHRQSAVFGE 44


>gi|317014994|gb|ADU82430.1| flagellar basal body rod protein FlgB [Helicobacter pylori
           Gambia94/24]
          Length = 140

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 36/136 (26%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            R  +I+ NIAN  T         YR K + FE V+      +  +I  +QS  V     
Sbjct: 19  LRQDMIASNIANVDT-------PFYRPKDLDFESVLAE----KKAEIFENQSNKVLPLAH 67

Query: 80  GHP---------------------VANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            +P                     +A   G     +V++ +ET++M + + +Y+A    +
Sbjct: 68  TNPRHLDFENSAKNGASLFFRDGHLAKNDGN----SVDLDIETSEMGKNSTMYLALSSAL 123

Query: 119 KQSHDMMTTTLDLLRD 134
           K+   ++   +D  ++
Sbjct: 124 KKYRGVINYAIDSSKN 139


>gi|307546971|ref|YP_003899450.1| flagellar basal body rod protein FlgB [Halomonas elongata DSM
          2581]
 gi|307218995|emb|CBV44265.1| flagellar basal body rod protein FlgB [Halomonas elongata DSM
          2581]
          Length = 137

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +D L A+ +     L+++  R Q+++ NIANA T G       Y+ + + F   +  +
Sbjct: 2  IDQLDAAFNFQQQALSLRHERQQVLASNIANADTPG-------YKARDMDFSSALEQA 52


>gi|115523176|ref|YP_780087.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
           BisA53]
 gi|115517123|gb|ABJ05107.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisA53]
          Length = 134

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 17/126 (13%)

Query: 8   AHIANSGLAVQ--SARMQIISENIANARTTGDTPGSDPYRRKTI-SFEEVMHGSGGVRVK 64
             +A+S    Q  S R   IS N+ANA T G       YR + I  F +++     V V 
Sbjct: 14  FDVASS--HAQWLSLRQASISSNVANANTPG-------YRAQDIEPFAKILDAKV-VPVA 63

Query: 65  KIG---VDQSTFVEEFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQ 120
                 +   +   E   G    ++  +V   N V++  E     + NR Y  N   +K 
Sbjct: 64  VTNPRHITTGSITSERAQGMRKEDSWDVVHSGNSVSLEQEMLKAGDINRDYSLNTAIVKS 123

Query: 121 SHDMMT 126
            H M  
Sbjct: 124 FHRMFM 129


>gi|163733142|ref|ZP_02140586.1| flagellar basal-body rod protein FlgF, putative [Roseobacter
           litoralis Och 149]
 gi|161393677|gb|EDQ18002.1| flagellar basal-body rod protein FlgF, putative [Roseobacter
           litoralis Och 149]
          Length = 237

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 20/54 (37%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++P          V+  NVN +++   M E  R Y      ++   + +   + 
Sbjct: 180 YEPAEQGRILQSFVENSNVNPILQLTRMIEVQRAYELGASFLEAEDERVRQAMR 233


>gi|78776233|ref|YP_392548.1| flagellar hook protein FlgE [Sulfurimonas denitrificans DSM 1251]
 gi|78496773|gb|ABB43313.1| Flagellar hook FlgE [Sulfurimonas denitrificans DSM 1251]
          Length = 718

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S     SGL      M + S NIAN  T G       Y+    +F +++  +
Sbjct: 1  MLKSLFAGVSGLQSHQVAMDVESNNIANVNTVG-------YKYSRANFSDLLAQT 48



 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++ +    +    R Y AN +TI  S  ++ T + L
Sbjct: 676 EASNVDLSLALTQLIIIQRGYQANGKTITTSDQLLQTLIGL 716


>gi|17989434|ref|NP_542067.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
           str. 16M]
 gi|23499913|ref|NP_699353.1| flagellar basal body rod protein FlgB [Brucella suis 1330]
 gi|161620233|ref|YP_001594119.1| flagellar basal body rod protein FlgB [Brucella canis ATCC 23365]
 gi|225628622|ref|ZP_03786656.1| flagellar basal-body rod protein FlgB [Brucella ceti str. Cudo]
 gi|225686009|ref|YP_002733981.1| flagellar basal body rod protein FlgB [Brucella melitensis ATCC
           23457]
 gi|254702573|ref|ZP_05164401.1| flagellar basal body rod protein FlgB [Brucella suis bv. 3 str.
           686]
 gi|254706295|ref|ZP_05168123.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis
           M163/99/10]
 gi|254711411|ref|ZP_05173222.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis
           B2/94]
 gi|254712010|ref|ZP_05173821.1| flagellar basal body rod protein FlgB [Brucella ceti M644/93/1]
 gi|254715079|ref|ZP_05176890.1| flagellar basal body rod protein FlgB [Brucella ceti M13/05/1]
 gi|256014939|ref|YP_003104948.1| flagellar basal body rod protein [Brucella microti CCM 4915]
 gi|256029959|ref|ZP_05443573.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis
           M292/94/1]
 gi|256043070|ref|ZP_05446014.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256059611|ref|ZP_05449809.1| flagellar basal body rod protein FlgB [Brucella neotomae 5K33]
 gi|256111946|ref|ZP_05452897.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 3
           str. Ether]
 gi|256158121|ref|ZP_05456039.1| flagellar basal body rod protein FlgB [Brucella ceti M490/95/1]
 gi|256252925|ref|ZP_05458461.1| flagellar basal body rod protein FlgB [Brucella ceti B1/94]
 gi|256262868|ref|ZP_05465400.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 2
           str. 63/9]
 gi|260564300|ref|ZP_05834785.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
           str. 16M]
 gi|261216789|ref|ZP_05931070.1| flagellar basal-body rod protein FlgB [Brucella ceti M13/05/1]
 gi|261220016|ref|ZP_05934297.1| flagellar basal-body rod protein FlgB [Brucella ceti B1/94]
 gi|261313739|ref|ZP_05952936.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
           M163/99/10]
 gi|261319019|ref|ZP_05958216.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
           B2/94]
 gi|261319656|ref|ZP_05958853.1| flagellar basal-body rod protein FlgB [Brucella ceti M644/93/1]
 gi|261323580|ref|ZP_05962777.1| flagellar basal-body rod protein FlgB [Brucella neotomae 5K33]
 gi|261753153|ref|ZP_05996862.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 3 str.
           686]
 gi|265986978|ref|ZP_06099535.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
           M292/94/1]
 gi|265989508|ref|ZP_06102065.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265993393|ref|ZP_06105950.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 3
           str. Ether]
 gi|265996638|ref|ZP_06109195.1| flagellar basal-body rod protein FlgB [Brucella ceti M490/95/1]
 gi|294853172|ref|ZP_06793844.1| flagellar basal-body rod protein FlgB [Brucella sp. NVSL 07-0026]
 gi|17985311|gb|AAL54331.1| flagellar basal-body rod protein flgb [Brucella melitensis bv. 1
           str. 16M]
 gi|23463490|gb|AAN33358.1| flagellar basal-body rod protein FlgB [Brucella suis 1330]
 gi|161337044|gb|ABX63348.1| flagellar basal-body rod protein FlgB [Brucella canis ATCC 23365]
 gi|225616468|gb|EEH13516.1| flagellar basal-body rod protein FlgB [Brucella ceti str. Cudo]
 gi|225642114|gb|ACO02027.1| flagellar basal-body rod protein FlgB [Brucella melitensis ATCC
           23457]
 gi|255997599|gb|ACU49286.1| flagellar basal body rod protein [Brucella microti CCM 4915]
 gi|260151943|gb|EEW87036.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
           str. 16M]
 gi|260918600|gb|EEX85253.1| flagellar basal-body rod protein FlgB [Brucella ceti B1/94]
 gi|260921878|gb|EEX88446.1| flagellar basal-body rod protein FlgB [Brucella ceti M13/05/1]
 gi|261292346|gb|EEX95842.1| flagellar basal-body rod protein FlgB [Brucella ceti M644/93/1]
 gi|261298242|gb|EEY01739.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
           B2/94]
 gi|261299560|gb|EEY03057.1| flagellar basal-body rod protein FlgB [Brucella neotomae 5K33]
 gi|261302765|gb|EEY06262.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
           M163/99/10]
 gi|261742906|gb|EEY30832.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 3 str.
           686]
 gi|262550935|gb|EEZ07096.1| flagellar basal-body rod protein FlgB [Brucella ceti M490/95/1]
 gi|262764263|gb|EEZ10295.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 3
           str. Ether]
 gi|263000177|gb|EEZ12867.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263092703|gb|EEZ16912.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 2
           str. 63/9]
 gi|264659175|gb|EEZ29436.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
           M292/94/1]
 gi|294818827|gb|EFG35827.1| flagellar basal-body rod protein FlgB [Brucella sp. NVSL 07-0026]
 gi|326410332|gb|ADZ67396.1| flagellar basal body rod protein FlgB [Brucella melitensis M28]
 gi|326553624|gb|ADZ88263.1| flagellar basal body rod protein FlgB [Brucella melitensis M5-90]
          Length = 126

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 43/128 (33%), Gaps = 36/128 (28%)

Query: 17  VQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVRVKKIGVDQSTF 73
            Q  S R   ++ N+ANA T    P    +R + +  F +V+  +               
Sbjct: 14  AQWLSVRQATVAGNVANANT----PD---FRARDVQPFADVLDKTQLTMTAT-------- 58

Query: 74  VEEFDPGHPVANASGIVK---YPN-----------VNVLVETADMRETNRLYMANLQTIK 119
                P H  A A GI      P+           V+V  E     E  R Y  N   +K
Sbjct: 59  ----SPLHLEAEADGIAATRLRPDDVTEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVK 114

Query: 120 QSHDMMTT 127
             H MM +
Sbjct: 115 AFHRMMLS 122


>gi|313672183|ref|YP_004050294.1| flagellar hook-associated protein flgk [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312938939|gb|ADR18131.1| flagellar hook-associated protein FlgK [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 582

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V++  E  +M +  + Y AN + I     M+   ++
Sbjct: 540 VSMDEEYTNMIKFQKAYEANARFITAVDQMIDKLIN 575


>gi|289666048|ref|ZP_06487629.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 251

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 202 SGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|303275342|ref|XP_003056967.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461319|gb|EEH58612.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 168

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 14/63 (22%)

Query: 38  TPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVKYPNVN 96
           T    PY     SF     G  GV            +  ++PG P  N +  ++ YPNVN
Sbjct: 74  TEDGGPYFADE-SFAIAHGGGPGV------------LTMYNPGAPDCNGSQFMITYPNVN 120

Query: 97  VLV 99
              
Sbjct: 121 PAA 123


>gi|21242726|ref|NP_642308.1| flagellar basal body rod protein FlgF [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|21108202|gb|AAM36844.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 251

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 202 SGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|134297191|ref|YP_001120926.1| flagellar hook-associated protein FlgK [Burkholderia vietnamiensis
           G4]
 gi|134140348|gb|ABO56091.1| flagellar hook-associated protein FlgK [Burkholderia vietnamiensis
           G4]
          Length = 655

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 615 SGVNQNEEAANLMQYQQLYQANAKVIQTAQTLFQTVLGL 653


>gi|325927876|ref|ZP_08189100.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           perforans 91-118]
 gi|325541716|gb|EGD13234.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           perforans 91-118]
          Length = 243

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 194 SGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 240


>gi|84624089|ref|YP_451461.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|161898986|ref|YP_201213.2| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|84368029|dbj|BAE69187.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 251

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 202 SGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|212634345|ref|YP_002310870.1| flagellar basal body rod protein FlgB [Shewanella piezotolerans
          WP3]
 gi|212555829|gb|ACJ28283.1| Flagellar basal-body rod protein FlgB [Shewanella piezotolerans
          WP3]
          Length = 132

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 7/41 (17%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S R +++S NIANA T         Y+ + + F + M+ + 
Sbjct: 20 SQRAEVLSSNIANADTPN-------YKARDVDFAKAMNSAQ 53


>gi|58426791|gb|AAW75828.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 280

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 231 SGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 277


>gi|296531728|ref|ZP_06894556.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC
          49957]
 gi|296267944|gb|EFH13743.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC
          49957]
          Length = 252

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 10/53 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          MD   + + ++ SG      +M +++ N+ANA T+G       YR     F+ 
Sbjct: 1  MD---SPSTVSLSGQLALRQQMDVVANNLANATTSG-------YRGDRTLFQS 43


>gi|291326355|ref|ZP_06124197.2| flagellar hook-associated protein FlgK [Providencia rettgeri DSM
          1131]
 gi|291314693|gb|EFE55146.1| flagellar hook-associated protein FlgK [Providencia rettgeri DSM
          1131]
          Length = 562

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          L    + A SG+      + +IS N+ANA       G   Y R++  F E
Sbjct: 17 LNNVMNNALSGVNAAQGGLSVISNNLANA-------GVGYYHRQSAVFGE 59


>gi|261344136|ref|ZP_05971780.1| flagellar hook-associated protein FlgK [Providencia rustigianii
          DSM 4541]
 gi|282567728|gb|EFB73263.1| flagellar hook-associated protein FlgK [Providencia rustigianii
          DSM 4541]
          Length = 547

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          L    + A SG+      + +IS N+ANA       G   Y R++  F E
Sbjct: 2  LNNVMNNALSGVNAAQGGLSVISNNLANA-------GVGYYHRQSAVFGE 44


>gi|241566254|ref|XP_002402126.1| 28S ribosomal protein S18A, putative [Ixodes scapularis]
 gi|215499986|gb|EEC09480.1| 28S ribosomal protein S18A, putative [Ixodes scapularis]
          Length = 171

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 21/50 (42%)

Query: 44 YRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
          Y  ++  F   +  +  V VK+I   Q   V  ++  +  +   G+V  P
Sbjct: 14 YALRSTVFSRSLRTTAAVGVKEIRERQEDGVTIYEGINVDSPRKGLVVKP 63


>gi|317121043|ref|YP_004101046.1| flagellar hook-associated protein FlgK [Thermaerobacter
          marianensis DSM 12885]
 gi|315591023|gb|ADU50319.1| flagellar hook-associated protein FlgK [Thermaerobacter
          marianensis DSM 12885]
          Length = 520

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANART------TGDTPGSDPYRRKTISFEEV 54
          M        +A  GL  Q   + +   NIANA T            +  Y   +++    
Sbjct: 1  MRSTFFGLELARLGLWAQQRALDVTGHNIANANTEGYSRQVARLSPTPAYAPPSLAMAAE 60

Query: 55 MHGSG-GVRVKKIGV 68
              G GV+V +I  
Sbjct: 61 AGQVGTGVQVAEIQR 75


>gi|292489136|ref|YP_003532023.1| flagellar basal-body rod protein FlgB [Erwinia amylovora CFBP1430]
 gi|291554570|emb|CBA22186.1| Flagellar basal-body rod protein flgB [Erwinia amylovora CFBP1430]
 gi|312173294|emb|CBX81549.1| Flagellar basal-body rod protein flgB [Erwinia amylovora ATCC
           BAA-2158]
          Length = 147

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 33/132 (25%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGVRVKK 65
            L++ S R ++++ NIANA T G       Y  + I F + +  +          V +  
Sbjct: 27  ALSLLSRRQEVLASNIANADTPG-------YLARDIDFSQQLKNTLANQSMAKSPVSLSL 79

Query: 66  IGV----------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                        D +  +    P  P A+ +       V++  E   M +TN  Y + L
Sbjct: 80  TAEKHIEGKGRPFDDANLLYR-TPDQPSADGN------TVDMDRERIGMADTNVKYQSGL 132

Query: 116 QTIKQ-SHDMMT 126
             +      MM+
Sbjct: 133 TFLGADIKKMMS 144


>gi|166712061|ref|ZP_02243268.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 251

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 202 SGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|300854205|ref|YP_003779189.1| flagellar basal body protein FlgB [Clostridium ljungdahlii DSM
           13528]
 gi|300434320|gb|ADK14087.1| flagellar basal body protein FlgB [Clostridium ljungdahlii DSM
           13528]
          Length = 133

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 14/124 (11%)

Query: 12  NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS 71
             GL    AR Q IS NI+N  T G       Y+RK ++FEE +  S  V   ++  D +
Sbjct: 17  ARGLDAAEARSQAISSNISNINTAG-------YKRKYVTFEENLKNS--VDNLELKTDDA 67

Query: 72  TFVEEFD-----PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             ++  +       +  ++ S      NV++ VET +      +Y A +        M  
Sbjct: 68  KHIKMGNDYGAITTNTDSSTSMRSDGNNVDIEVETVNQAANELMYNALITLENNRLSMQK 127

Query: 127 TTLD 130
           + ++
Sbjct: 128 SVIN 131


>gi|294625275|ref|ZP_06703914.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292600449|gb|EFF44547.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 251

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 202 SGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|89056689|ref|YP_512140.1| flagellar basal body rod protein FlgB [Jannaschia sp. CCS1]
 gi|88866238|gb|ABD57115.1| flagellar basal-body rod protein FlgB [Jannaschia sp. CCS1]
          Length = 117

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 48/130 (36%), Gaps = 36/130 (27%)

Query: 12  NSGLAVQSA-RMQIISENIANARTTGDTPGSDPYRRKTIS-FE------EVMHGSGGVRV 63
            SGLA  SA R  ++++NIANA T G       YR + ++ F+            G   V
Sbjct: 11  ASGLARHSASRQAVVAQNIANADTPG-------YRARDVADFQQTWRNMTAEAREGRTEV 63

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
               +D  T      P  P  N+        V++  E     E  R +   L+       
Sbjct: 64  PMRVIDART------PASPNGNS--------VSLEFEMLRGIEAQRAHSRALRV------ 103

Query: 124 MMTTTLDLLR 133
              + + +LR
Sbjct: 104 -YGSAMTILR 112


>gi|317010251|gb|ADU80831.1| flagellar basal body rod protein FlgB [Helicobacter pylori India7]
          Length = 140

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 36/136 (26%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            R  +I+ NIAN  T         YR + + FE V+      +  +I  +QS+ V     
Sbjct: 19  LRQDMIASNIANVDT-------PFYRPRDLDFESVLAE----KKAEIFENQSSKVLPLAH 67

Query: 80  GHP---------------------VANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            +P                     +A   G     +V++ +ET++M + + +Y+A    +
Sbjct: 68  TNPRHLDFENSAKDGASLFFRDGHLAKNDGN----SVDLDIETSEMGKNSTMYLALSSAL 123

Query: 119 KQSHDMMTTTLDLLRD 134
           K+   ++   +D  ++
Sbjct: 124 KKYRGVINYAIDSSKN 139


>gi|315121850|ref|YP_004062339.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495252|gb|ADR51851.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 183

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 8/41 (19%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGS 58
           S R +++SENIANA     TPG   YR K IS FE V++ +
Sbjct: 71  SERQKVVSENIANA----STPG---YRSKDISAFETVLNDN 104


>gi|163844343|ref|YP_001621998.1| flagellar basal body rod protein FlgB [Brucella suis ATCC 23445]
 gi|163675066|gb|ABY39176.1| flagellar basal-body rod protein FlgB [Brucella suis ATCC 23445]
          Length = 126

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 43/128 (33%), Gaps = 36/128 (28%)

Query: 17  VQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVRVKKIGVDQSTF 73
            Q  S R   ++ N+ANA T    P    +R + +  F +V+  +               
Sbjct: 14  AQWLSVRQATVAGNVANANT----PD---FRARDVQPFADVLDKTQLTMTAT-------- 58

Query: 74  VEEFDPGHPVANASGIVK---YPN-----------VNVLVETADMRETNRLYMANLQTIK 119
                P H  A A GI      P+           V+V  E     E  R Y  N   +K
Sbjct: 59  ----SPLHLEAEADGIAATRLRPDDVTEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVK 114

Query: 120 QSHDMMTT 127
             H MM +
Sbjct: 115 AFHRMMLS 122


>gi|238028848|ref|YP_002913079.1| flagellar basal body rod protein FlgF [Burkholderia glumae BGR1]
 gi|37360907|dbj|BAC98361.1| flagellar basal-body rod protein [Burkholderia glumae]
 gi|237878042|gb|ACR30375.1| Flagellar basal-body rod protein [Burkholderia glumae BGR1]
          Length = 250

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             E DP   +A +S  ++  NVN +     M +  R +  + + I+ +         +L
Sbjct: 191 PAEVDPSVVLAPSS--LEGSNVNPVSAMVSMLDNARAFQLHTKLIETADQNEQNANQIL 247


>gi|325274792|ref|ZP_08140821.1| flagellar hook-associated protein FlgK [Pseudomonas sp. TJI-51]
 gi|324100073|gb|EGB97890.1| flagellar hook-associated protein FlgK [Pseudomonas sp. TJI-51]
          Length = 680

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 7/74 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +   I  SGL    A + + S NIANA T+G       Y R+          + G   
Sbjct: 1  MSSLISIGLSGLNASQAALSVTSNNIANAATSG-------YSRQQTLQAAGPSHNIGAGF 53

Query: 64 KKIGVDQSTFVEEF 77
             G   +     +
Sbjct: 54 LGTGTTLADVRRIY 67


>gi|304558598|gb|ADM41262.1| Flagellar hook-associated protein FlgK [Edwardsiella tarda
          FL6-60]
          Length = 546

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 14/70 (20%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          +    + A SGL+     + + S NI N  T G       Y R+++SF E    S     
Sbjct: 1  MANLINNAMSGLSAAQTALAVTSNNINNVYTAG-------YNRQSVSFAENNGTSTPAGF 53

Query: 59 --GGVRVKKI 66
             GV V  I
Sbjct: 54 IGNGVVVSGI 63



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  D+    + YMAN Q I+ +  M    LD+
Sbjct: 507 SGVNLDEEYGDLVRFQQYYMANAQVIQTATSMFNALLDI 545


>gi|323527706|ref|YP_004229859.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1001]
 gi|323384708|gb|ADX56799.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1001]
          Length = 657

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++ +  +LY AN + I+ +  +  T L + +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLLGIFQ 657


>gi|167623358|ref|YP_001673652.1| flagellar basal body rod protein FlgB [Shewanella halifaxensis
           HAW-EB4]
 gi|167353380|gb|ABZ75993.1| flagellar basal-body rod protein FlgB [Shewanella halifaxensis
           HAW-EB4]
          Length = 132

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 19/121 (15%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           S R +++S NIANA T         Y+ + + F + M  +   +   + + +S     FD
Sbjct: 20  SQRAEVLSSNIANADTPN-------YKARDVDFSKAMGAAQSQQ-SGLAMTKSDTKH-FD 70

Query: 79  PGHPVANASGIVKYPN---------VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                    G  + PN         V++  E +   +    Y  +L  +      M   L
Sbjct: 71  MAALTQQHVGY-RVPNQPDTGDGNTVDIQQEQSAFMQNALEYQMSLGFLDSKFAGMKKAL 129

Query: 130 D 130
            
Sbjct: 130 R 130


>gi|197122916|ref|YP_002134867.1| flagellar hook-associated protein FlgK [Anaeromyxobacter sp. K]
 gi|196172765|gb|ACG73738.1| flagellar hook-associated protein FlgK [Anaeromyxobacter sp. K]
          Length = 469

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  +M +  R Y A  + I+ S +M  T L L
Sbjct: 430 SGVSVDEELLEMEKAQRAYEAISKVIQASSEMFDTLLKL 468


>gi|149375037|ref|ZP_01892810.1| Flagellar basal body protein [Marinobacter algicola DG893]
 gi|149360926|gb|EDM49377.1| Flagellar basal body protein [Marinobacter algicola DG893]
          Length = 132

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          L  +  I    L  +  R ++++ N+ANA T G       Y+ + + F+ +M  + 
Sbjct: 5  LDKALGIHQHALEGRIKRAEVLANNLANADTPG-------YKARDVDFQAMMQKAQ 53


>gi|269138583|ref|YP_003295283.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
 gi|267984243|gb|ACY84072.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
 gi|304558593|gb|ADM41257.1| Flagellar basal-body rod protein FlgF [Edwardsiella tarda FL6-60]
          Length = 251

 Score = 36.4 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    +M    R +   ++ I+   D       LL
Sbjct: 204 GVLEGSNVQPVEAMVNMITNARRFEMQMKVIRSVDDNEQKANQLL 248


>gi|56965598|ref|YP_177332.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
 gi|56911844|dbj|BAD66371.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
          Length = 265

 Score = 36.4 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           ++  NV+       M    RL+ AN + ++     M   + ++ R
Sbjct: 219 IERSNVDTAASMNAMLSAYRLFEANQKVVQAYDQSMDKAVNEVGR 263


>gi|218135314|ref|ZP_03464118.1| hypothetical protein BACPEC_03219 [Bacteroides pectinophilus ATCC
          43243]
 gi|217990699|gb|EEC56710.1| hypothetical protein BACPEC_03219 [Bacteroides pectinophilus ATCC
          43243]
          Length = 512

 Score = 36.4 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANART 34
          M       +IA +GL   S  +   + N++N  T
Sbjct: 1  MPSTFFGLNIAYTGLQAASVSINTTAHNVSNVNT 34


>gi|77165841|ref|YP_344366.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani ATCC
          19707]
 gi|76884155|gb|ABA58836.1| Flagellar basal-body rod protein FlgB [Nitrosococcus oceani ATCC
          19707]
          Length = 131

 Score = 36.4 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++  I    + + S R ++++ N+AN    GDTPG   Y+ + I F+  +  + G
Sbjct: 7  SALGIYPQAVTLGSRRAEVLAANLAN----GDTPG---YKARDIDFKAALQQAQG 54


>gi|17548563|ref|NP_521903.1| flagellar basal-body rod protein FlgB [Ralstonia solanacearum
          GMI1000]
 gi|17430811|emb|CAD17493.1| probable flagellar basal-body rod protein flgb [Ralstonia
          solanacearum GMI1000]
          Length = 165

 Score = 36.4 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           L ++S R Q+++ NIANA T         Y+ +   F+  +  + G +
Sbjct: 27 ALRLRSQRHQLLASNIANADTPS-------YKARDFDFQSALQKAAGQQ 68


>gi|310816830|ref|YP_003964794.1| flagellar basal-body rod protein FlgF, putative [Ketogulonicigenium
           vulgare Y25]
 gi|308755565|gb|ADO43494.1| flagellar basal-body rod protein FlgF, putative [Ketogulonicigenium
           vulgare Y25]
          Length = 237

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVN + + A M E  R Y        +  + + +T+ L+
Sbjct: 190 QGHLEGSNVNAIAQIARMIEVQRAYEFGQSLADREDERIRSTVQLM 235


>gi|169827117|ref|YP_001697275.1| flagellar basal body rod protein FlgB [Lysinibacillus sphaericus
          C3-41]
 gi|168991605|gb|ACA39145.1| Flagellar basal-body rod protein [Lysinibacillus sphaericus
          C3-41]
          Length = 130

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 7/47 (14%)

Query: 24 IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
           I+ NIAN  T         Y+ K +SF+E++    G+ +     D 
Sbjct: 24 TIANNIANVDTPN-------YKAKNVSFKEMLAEQKGIAISAYRTDN 63


>gi|221069316|ref|ZP_03545421.1| flagellar hook-associated protein FlgK [Comamonas testosteroni
          KF-1]
 gi|220714339|gb|EED69707.1| flagellar hook-associated protein FlgK [Comamonas testosteroni
          KF-1]
          Length = 648

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 7/56 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++  ++    L      +Q    NIAN  T G       Y R++++F+     + G
Sbjct: 1  MSLLNVGARALMANQIALQTTGHNIANVNTAG-------YSRQSVAFQTSAGQNIG 49


>gi|78047585|ref|YP_363760.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78036015|emb|CAJ23706.1| flagella basal body rod protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 251

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 202 SGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|327480021|gb|AEA83331.1| flagellar basal body rod protein FlgF [Pseudomonas stutzeri DSM
           4166]
          Length = 246

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 20/37 (54%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           SG ++  NVN + E   +   +R +  +++ ++ + D
Sbjct: 198 SGFLETSNVNAVSEMTSILALSRQFELHVKMMRTAED 234


>gi|296283218|ref|ZP_06861216.1| flagellar hook-associated protein FlgK [Citromicrobium
           bathyomarinum JL354]
          Length = 698

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E + M      Y A  + +  +  M  T LD++R
Sbjct: 658 SGVNLDEELSQMVVLQNSYSAAARVMTTATQMYDTLLDMVR 698



 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          L      A SGL+   A ++ +S NIAN      TPG   Y R+ +S   
Sbjct: 3  LSNILGTAVSGLSASQAGIRSVSNNIANI----STPG---YARERVSLST 45


>gi|259418017|ref|ZP_05741936.1| flagellar basal-body rod protein FlgF [Silicibacter sp. TrichCH4B]
 gi|259346923|gb|EEW58737.1| flagellar basal-body rod protein FlgF [Silicibacter sp. TrichCH4B]
          Length = 238

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 17/44 (38%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + + A M E  R Y      +      +   +D
Sbjct: 190 QGFLEGSNVNTIHQLARMIEVQRAYEMGQSFLDNEDKRIRAAID 233


>gi|183598623|ref|ZP_02960116.1| hypothetical protein PROSTU_02024 [Providencia stuartii ATCC
          25827]
 gi|188020803|gb|EDU58843.1| hypothetical protein PROSTU_02024 [Providencia stuartii ATCC
          25827]
          Length = 559

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          L    + A SG+      + +IS N+ANA       G   Y R++  F E
Sbjct: 15 LNNVMNNALSGVNAAQGGLSVISNNLANA-------GVGYYHRQSAVFGE 57


>gi|154250318|ref|YP_001411143.1| flagellar hook-associated protein FlgK [Fervidobacterium nodosum
           Rt17-B1]
 gi|154154254|gb|ABS61486.1| flagellar hook-associated protein FlgK [Fervidobacterium nodosum
           Rt17-B1]
          Length = 847

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V++  E A+M +  + + A  + +    DM++  +D
Sbjct: 805 VSLDEEMANMIKYQQAFNAAARVMTAVDDMISRVID 840



 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          L  + +    G+      M +++ NIANA T G
Sbjct: 6  LFGTLNTGLLGVYASKLAMNVVAHNIANANTPG 38


>gi|120598238|ref|YP_962812.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1]
 gi|120558331|gb|ABM24258.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1]
          Length = 641

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    +++ + S NIANA T G       Y R+  +   +     G      G
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAG-------YHRQVATQSTLESQRFGNSFYGTG 58

Query: 68 VDQSTFVEEFD 78
                   ++
Sbjct: 59 TYVDDVKRIYN 69


>gi|22126393|ref|NP_669816.1| flagellar basal body rod protein FlgB [Yersinia pestis KIM 10]
 gi|45441412|ref|NP_992951.1| flagellar basal body rod protein FlgB [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51596008|ref|YP_070199.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
           IP 32953]
 gi|108807170|ref|YP_651086.1| flagellar basal body rod protein FlgB [Yersinia pestis Antiqua]
 gi|108812486|ref|YP_648253.1| flagellar basal body rod protein FlgB [Yersinia pestis Nepal516]
 gi|145598613|ref|YP_001162689.1| flagellar basal body rod protein FlgB [Yersinia pestis Pestoides F]
 gi|149366254|ref|ZP_01888289.1| flagellar basal-body rod protein FlgB [Yersinia pestis CA88-4125]
 gi|153947522|ref|YP_001401293.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
           IP 31758]
 gi|162419951|ref|YP_001606470.1| flagellar basal body rod protein FlgB [Yersinia pestis Angola]
 gi|165925964|ref|ZP_02221796.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938769|ref|ZP_02227324.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010954|ref|ZP_02231852.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166211185|ref|ZP_02237220.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401128|ref|ZP_02306631.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167420101|ref|ZP_02311854.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425829|ref|ZP_02317582.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167469717|ref|ZP_02334421.1| flagellar basal-body rod protein FlgB [Yersinia pestis FV-1]
 gi|170024650|ref|YP_001721155.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
           YPIII]
 gi|186895111|ref|YP_001872223.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis
           PB1/+]
 gi|218928919|ref|YP_002346794.1| flagellar basal body rod protein FlgB [Yersinia pestis CO92]
 gi|229896239|ref|ZP_04511409.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides A]
 gi|229897174|ref|ZP_04512330.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229897900|ref|ZP_04513051.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902868|ref|ZP_04517985.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516]
 gi|270486648|ref|ZP_06203722.1| flagellar basal-body rod protein FlgB [Yersinia pestis KIM D27]
 gi|294504033|ref|YP_003568095.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|21959380|gb|AAM86067.1|AE013854_3 cell-proximal portion of basal-body rod protein [Yersinia pestis
           KIM 10]
 gi|45436273|gb|AAS61828.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51589290|emb|CAH20911.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
           IP 32953]
 gi|108776134|gb|ABG18653.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516]
 gi|108779083|gb|ABG13141.1| flagellar basal-body rod protein FlgB [Yersinia pestis Antiqua]
 gi|115347530|emb|CAL20439.1| flagellar basal-body rod protein FlgB [Yersinia pestis CO92]
 gi|145210309|gb|ABP39716.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides F]
 gi|149292667|gb|EDM42741.1| flagellar basal-body rod protein FlgB [Yersinia pestis CA88-4125]
 gi|152959017|gb|ABS46478.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
           IP 31758]
 gi|162352766|gb|ABX86714.1| flagellar basal-body rod protein FlgB [Yersinia pestis Angola]
 gi|165913383|gb|EDR32005.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922168|gb|EDR39345.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990298|gb|EDR42599.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166208365|gb|EDR52845.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961796|gb|EDR57817.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049517|gb|EDR60925.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055228|gb|EDR65025.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751184|gb|ACA68702.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
           YPIII]
 gi|186698137|gb|ACC88766.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
           PB1/+]
 gi|229680315|gb|EEO76414.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516]
 gi|229688941|gb|EEO81006.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693511|gb|EEO83560.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701162|gb|EEO89191.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides A]
 gi|262361781|gb|ACY58502.1| flagellar basal body rod protein [Yersinia pestis D106004]
 gi|262366083|gb|ACY62640.1| flagellar basal body rod protein [Yersinia pestis D182038]
 gi|270335152|gb|EFA45929.1| flagellar basal-body rod protein FlgB [Yersinia pestis KIM D27]
 gi|294354492|gb|ADE64833.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|320015470|gb|ADV99041.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 137

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------GSGGVRVK---- 64
           L  Q    +I+S NIANA T G       ++ + I F   +        + G  V     
Sbjct: 18  LRAQRQ--EILSSNIANADTPG-------FQARDIDFSSQLKKVMEQGRANGTGVSLSLT 68

Query: 65  ------KIGVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                    V        F  P  P  + +       V++  E  +  + +  Y  +L  
Sbjct: 69  SARHIPATTVQPPDLDLLFRIPDQPAMDGN------TVDMDRERTNFADNSLKYQTDLTI 122

Query: 118 I-KQSHDMMT 126
           +  Q   MM+
Sbjct: 123 LGGQIKGMMS 132


>gi|242238966|ref|YP_002987147.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech703]
 gi|242131023|gb|ACS85325.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech703]
          Length = 137

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------------GGV 61
           L  Q    +I++ NIANA T G       Y+ + I F   +  +                
Sbjct: 18  LRAQRQ--EILAGNIANADTPG-------YQARDIDFANELKKAMKQGRTSESSLSLTTT 68

Query: 62  RVKKI---GVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            V+ I   G         +  P  P  + +       V++  E  +  + +  Y  +L  
Sbjct: 69  SVRHIEVSGESFPDLNLLYRVPDQPALDGN------TVDMDRERTNFADNSLRYQTDLTL 122

Query: 118 I-KQSHDMMT 126
           +  Q   M +
Sbjct: 123 LGGQIKSMTS 132


>gi|254299689|ref|ZP_04967138.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          406e]
 gi|157809389|gb|EDO86559.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          406e]
          Length = 131

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 9/46 (19%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L  +  +  +I+ N+AN  T G       Y+ + + F+  +  +GG
Sbjct: 25 LRAERTK--VIASNLANLDTPG-------YQARDLDFKRSLAEAGG 61


>gi|150020229|ref|YP_001305583.1| flagellar hook-associated protein FlgK [Thermosipho melanesiensis
           BI429]
 gi|149792750|gb|ABR30198.1| flagellar hook-associated protein FlgK [Thermosipho melanesiensis
           BI429]
          Length = 846

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 18/36 (50%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V++  E A+M +    + A+ + +    +M+   +D
Sbjct: 804 VSLDEEMANMIKFQHAFNASARVMTAVDEMIGRVID 839


>gi|288870659|ref|ZP_06114878.2| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM
           13479]
 gi|288866377|gb|EFC98675.1| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM
           13479]
          Length = 248

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 4/26 (15%), Positives = 11/26 (42%)

Query: 99  VETADMRETNRLYMANLQTIKQSHDM 124
            E  ++ +  R +  N + +  +  M
Sbjct: 215 TEMINLLQAQRAFQLNSRIVSAADQM 240


>gi|224437224|ref|ZP_03658201.1| flagellar distal rod protein FlgG [Helicobacter cinaedi CCUG
          18818]
 gi|313143684|ref|ZP_07805877.1| flagellar distal rod protein FlgG [Helicobacter cinaedi CCUG
          18818]
 gi|313128715|gb|EFR46332.1| flagellar distal rod protein FlgG [Helicobacter cinaedi CCUG
          18818]
          Length = 277

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 7/37 (18%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          G+  Q  R+ +IS N+AN  TTG       ++R  + 
Sbjct: 11 GMVTQFNRLDLISNNLANLNTTG-------FKRDDVV 40


>gi|182412238|ref|YP_001817304.1| hypothetical protein Oter_0414 [Opitutus terrae PB90-1]
 gi|177839452|gb|ACB73704.1| protein of unknown function DUF1078 [Opitutus terrae PB90-1]
          Length = 312

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 9/72 (12%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY--------RRKTISFEEV 54
           LI +     S +   S  +++I  NIAN  TT     S  Y        R  T +   V
Sbjct: 2  PLIGTLTSGVSAVRTFSKGLEVIGSNIANVNTTAYKSSSATYGDTFSNTLRAATATDSAV 61

Query: 55 MHGSGGVRVKKI 66
            G+ GV+V  I
Sbjct: 62 QIGT-GVQVAGI 72



 Score = 34.1 bits (78), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G+++  NV++  + +++  T R + A  + I  S  ++   ++L R
Sbjct: 264 QTGVLEQSNVDLTDQFSNLITTQRSFQAGSRLITVSDSVLEDIVNLKR 311


>gi|126653431|ref|ZP_01725527.1| flagellar hook-basal body protein [Bacillus sp. B14905]
 gi|126589787|gb|EAZ83920.1| flagellar hook-basal body protein [Bacillus sp. B14905]
          Length = 125

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  IS NIAN+ TTG       ++ K  SF E+++  
Sbjct: 19 LDTISNNIANSNTTG-------FKAKEASFNELLYQQ 48


>gi|308183714|ref|YP_003927841.1| flagellar basal body rod protein FlgB [Helicobacter pylori PeCan4]
 gi|308065899|gb|ADO07791.1| flagellar basal body rod protein FlgB [Helicobacter pylori PeCan4]
          Length = 140

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAE--- 49

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---------------------VANASGIVKYPNVNVLV 99
            +  +I  +Q++ V      +P                     +A   G     +V++ +
Sbjct: 50  -KKAEIFENQTSKVLPLAHTNPRHLDFENSAKDGASLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKN 139


>gi|291278934|ref|YP_003495769.1| flagellar basal-body rod protein FlgB [Deferribacter
          desulfuricans SSM1]
 gi|290753636|dbj|BAI80013.1| flagellar basal-body rod protein FlgB [Deferribacter
          desulfuricans SSM1]
          Length = 134

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 10/62 (16%)

Query: 1  MDYLIASAHIA--NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          MD L  + +I   +  L V S + ++ISENIAN  T         Y+ K + F++ M   
Sbjct: 1  MD-LFKAVNIDKLSYALDVTSYKNKVISENIANVDT-------PFYKAKKLDFKDAMQDV 52

Query: 59 GG 60
           G
Sbjct: 53 MG 54


>gi|85058008|ref|YP_453710.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
           'morsitans']
 gi|84778528|dbj|BAE73305.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
           'morsitans']
          Length = 137

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 31/124 (25%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKKIGVD-------Q 70
           R  +++ NIANA T G       Y+ + I F   +  +   G  R   + +         
Sbjct: 22  RQDVLAANIANADTPG-------YQARDIPFTRELRRAIEQGQQRSNNLSLSLTSRQHIP 74

Query: 71  STFVEEFD-------PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK-QSH 122
           +  V   D       P  P A+ +       V++  E  +  +    Y A+L  I  Q  
Sbjct: 75  AEGVAHADHSLLYRIPDQPSADGN------TVDMDRERVNFADNGMKYQASLSFINGQIK 128

Query: 123 DMMT 126
            MM+
Sbjct: 129 SMMS 132


>gi|325918878|ref|ZP_08180955.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325534915|gb|EGD06834.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 251

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 203 GMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|295688785|ref|YP_003592478.1| flagellar basal-body rod protein FlgF [Caulobacter segnis ATCC
           21756]
 gi|295430688|gb|ADG09860.1| flagellar basal-body rod protein FlgF [Caulobacter segnis ATCC
           21756]
          Length = 245

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 22/44 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G+++  NV  ++E   + +  R Y +  + +  + ++  T ++
Sbjct: 196 QGMLEASNVQSVLEITKLIQVQRAYESVAKMMDNTSELSRTAVE 239



 Score = 36.4 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          GL+ Q      + +++ NIANA TTG        R +     + + GS  V+
Sbjct: 8  GLSRQLTLRRELDVVANNIANANTTGFKVEDLMVRTEQSKPAKTLDGSAPVK 59


>gi|317153838|ref|YP_004121886.1| flagellar hook-associated protein FlgK [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944089|gb|ADU63140.1| flagellar hook-associated protein FlgK [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 711

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E +++      Y A  + I  +  M+ T L L
Sbjct: 673 VNLDEEMSNLIRYQASYTAAAKLITTADQMLQTILSL 709


>gi|116694225|ref|YP_728436.1| flagellar hook-associated protein FlgK [Ralstonia eutropha H16]
 gi|113528724|emb|CAJ95071.1| flagellar hook-associated protein 1 [Ralstonia eutropha H16]
          Length = 639

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  ET  M    +LY AN + I+ +  +  T + + R
Sbjct: 599 SGVNMDEETVSMLRFQQLYQANARVIQTAGTLFDTIIGIGR 639


>gi|313903612|ref|ZP_07837002.1| flagellar hook-associated protein FlgK [Thermaerobacter
          subterraneus DSM 13965]
 gi|313466165|gb|EFR61689.1| flagellar hook-associated protein FlgK [Thermaerobacter
          subterraneus DSM 13965]
          Length = 533

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 11/77 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG---------DTPGSDPYRRKTISF 51
          M        +A  GL  Q   + +   NIANA T G          TP   P  R     
Sbjct: 1  MRSTFFGLELARLGLWAQQRALDVTGHNIANANTPGYSRQVARLAPTPAYAPPSRAMAV- 59

Query: 52 EEVMHGSGGVRVKKIGV 68
           E      GV+V  I  
Sbjct: 60 -EAGQVGTGVQVAGIQR 75


>gi|225377360|ref|ZP_03754581.1| hypothetical protein ROSEINA2194_03008 [Roseburia inulinivorans
          DSM 16841]
 gi|225210785|gb|EEG93139.1| hypothetical protein ROSEINA2194_03008 [Roseburia inulinivorans
          DSM 16841]
          Length = 51

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          +I   + A +G+  +  R+ +++ N+ANA T G        RR
Sbjct: 1  MIKGLYTAYTGMVNEQKRLDVLTNNLANADTNGYKKKGQHRRR 43


>gi|319427083|gb|ADV55157.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
          200]
          Length = 641

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    +++ + S NIANA T G       Y R+  +   +     G      G
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAG-------YHRQVATQSTLESQRFGNSFYGTG 58

Query: 68 VDQSTFVEEFD 78
                   ++
Sbjct: 59 TYVDDVKRIYN 69


>gi|94495405|ref|ZP_01301985.1| flagellar hook-associated protein 1 [Sphingomonas sp. SKA58]
 gi|94424793|gb|EAT09814.1| flagellar hook-associated protein 1 [Sphingomonas sp. SKA58]
          Length = 445

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 19/82 (23%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
          +     I +SG       M  ISENIANA T G       Y R+T++  E    +     
Sbjct: 1  MSDLFIIGSSGTKAYRTAMAAISENIANAGTDG-------YARRTVTTAESGASTSTMSL 53

Query: 59 -------GGVRVKKIGVDQSTF 73
                 GG +V  +      +
Sbjct: 54 YIAKANFGGTQVMGVDRASDPY 75


>gi|296282282|ref|ZP_06860280.1| flagellar basal-body rod protein FlgB [Citromicrobium
          bathyomarinum JL354]
          Length = 115

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
            I  + L +++ RM ++  NIANA T G       Y+ + I F   +  
Sbjct: 6  FGIHGAALEIRAQRMAVLGSNIANAGTPG-------YKARDIDFGAALQA 48


>gi|190574266|ref|YP_001972111.1| flagellar basal body rod protein FlgB [Stenotrophomonas
          maltophilia K279a]
 gi|254523965|ref|ZP_05136020.1| flagellar basal-body rod protein FlgB [Stenotrophomonas sp.
          SKA14]
 gi|190012188|emb|CAQ45811.1| putative flagellar basal-body rod protein FlgB [Stenotrophomonas
          maltophilia K279a]
 gi|219721556|gb|EED40081.1| flagellar basal-body rod protein FlgB [Stenotrophomonas sp.
          SKA14]
          Length = 131

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 26/57 (45%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +     +    + ++  RM++I+ N+ NA T G       Y+ + + F+  +  + G
Sbjct: 5  ITDYLGVHAQAMPLREQRMKLIASNLGNADTPG-------YKAQDLDFDAALRHAQG 54


>gi|299531280|ref|ZP_07044690.1| flagellar hook-associated protein FlgK [Comamonas testosteroni
          S44]
 gi|298720687|gb|EFI61634.1| flagellar hook-associated protein FlgK [Comamonas testosteroni
          S44]
          Length = 648

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 7/56 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++  ++    L      +Q    NIAN  T G       Y R++++F+     + G
Sbjct: 1  MSLLNVGARALMANQIALQTTGHNIANVNTAG-------YSRQSVAFQTSAGQNIG 49


>gi|261840252|gb|ACY00018.1| flagellar basal body rod protein FlgB [Helicobacter pylori 52]
          Length = 140

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+     
Sbjct: 1   MDF-SKAFGLVYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVLAE--- 49

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---------------------VANASGIVKYPNVNVLV 99
            +  +I  +QS+ V      +P                     +A   G     +V++ +
Sbjct: 50  -KKAEIFENQSSKVLPLAHTNPRHLDFENSTKDGASLFFRDGHLAKNDGN----SVDLDI 104

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ET++M + + +Y+A    +K+   ++   +D  ++
Sbjct: 105 ETSEMGKNSTMYLALSSALKKYRGVINYAIDSNKN 139


>gi|86747891|ref|YP_484387.1| flagellar hook protein FlgE [Rhodopseudomonas palustris HaA2]
 gi|86570919|gb|ABD05476.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 421

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L  +   A S L  QS+ + +IS+NIAN+ T G       Y+  + SFE ++  +
Sbjct: 3  LSGALSSAISALNAQSSALAMISDNIANSSTVG-------YKTSSASFESLVTNT 50


>gi|146293684|ref|YP_001184108.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
          CN-32]
 gi|145565374|gb|ABP76309.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
          CN-32]
          Length = 641

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    +++ + S NIANA T G       Y R+  +   +     G      G
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAG-------YHRQVATQSTLESQRFGNSFYGTG 58

Query: 68 VDQSTFVEEFD 78
                   ++
Sbjct: 59 TYVDDVKRIYN 69


>gi|126443247|ref|YP_001061243.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          668]
 gi|167725927|ref|ZP_02409163.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          DM98]
 gi|126222738|gb|ABN86243.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          668]
          Length = 124

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 9/46 (19%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L  +  +  +I+ N+AN  T G       Y+ + + F+  +  +GG
Sbjct: 18 LRAERTK--VIASNLANLDTPG-------YQARDLDFKRSLAEAGG 54


>gi|268316362|ref|YP_003290081.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252]
 gi|262333896|gb|ACY47693.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252]
          Length = 112

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           +   + R++ ++ NIAN  T G       Y+R  +SFEE +  +
Sbjct: 12 AMQAYTWRLKALAANIANLDTPG-------YQRVGVSFEEALQQA 49


>gi|78485806|ref|YP_391731.1| hypothetical protein Tcr_1465 [Thiomicrospira crunogena XCL-2]
 gi|78364092|gb|ABB42057.1| Flagellar hook-associated protein FlgK [Thiomicrospira crunogena
           XCL-2]
          Length = 630

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           Y  VN+  E A++    + Y A+ Q I+ S  +  + L
Sbjct: 588 YSGVNLDEEAANLLRFQQAYQASAQIIQTSQSLFQSLL 625


>gi|21231396|ref|NP_637313.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768551|ref|YP_243313.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21113062|gb|AAM41237.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66573883|gb|AAY49293.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 251

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 202 SGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|110632659|ref|YP_672867.1| flagellar basal body rod protein FlgB [Mesorhizobium sp. BNC1]
 gi|110283643|gb|ABG61702.1| flagellar basal-body rod protein flgB [Chelativorans sp. BNC1]
          Length = 135

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 42/124 (33%), Gaps = 33/124 (26%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTI-SFEEVMHGS-------------GGVRVK 64
           S R   ++ NIAN  T         Y+   +  FE+V+ G+              GV   
Sbjct: 28  SVRQAAVAGNIANINTPS-------YKALDVEPFEKVLDGTRVAMQATHAQHQHTGVTPA 80

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
              +D+S   +      P  N+        V +  E     E  R +  N   +K  H M
Sbjct: 81  SFSLDESENPKML----PSENS--------VVLEDELVKAGEVRRAFELNTAIVKAFHRM 128

Query: 125 MTTT 128
           +  T
Sbjct: 129 ILMT 132


>gi|259907631|ref|YP_002647987.1| Flagellar basal-body rod protein FlgB [Erwinia pyrifoliae Ep1/96]
 gi|224963253|emb|CAX54737.1| Flagellar basal-body rod protein FlgB [Erwinia pyrifoliae Ep1/96]
 gi|283477473|emb|CAY73389.1| Flagellar basal-body rod protein flgB [Erwinia pyrifoliae DSM
           12163]
          Length = 135

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 33/132 (25%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGVRVKK 65
            L++ S R ++++ NIANA T G       Y  + I F + +  +          V +  
Sbjct: 15  ALSLLSRRQEVLASNIANADTPG-------YMARDIDFSQQLKNTLANQSMAKSPVSLSL 67

Query: 66  IGV----------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                        D +  +    P  P A+ +       V++  E   M +TN  Y + L
Sbjct: 68  TAEKHIEGKGRLFDDANLLYR-TPDQPSADGN------TVDMDRERIGMADTNVKYQSGL 120

Query: 116 QTIKQ-SHDMMT 126
             +      MM+
Sbjct: 121 TFLGADIKKMMS 132


>gi|313610100|gb|EFR85425.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           F2-208]
          Length = 92

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 55  VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 92


>gi|238793995|ref|ZP_04637613.1| Flagellar basal-body rod protein flgB [Yersinia intermedia ATCC
           29909]
 gi|238726627|gb|EEQ18163.1| Flagellar basal-body rod protein flgB [Yersinia intermedia ATCC
           29909]
          Length = 137

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------GSGGVRVK---- 64
           L  Q    +I+S NIANA T G       ++ + I F   +        + G  V     
Sbjct: 18  LRAQRQ--EILSSNIANADTPG-------FQARDIDFSSQLKKVMEQGRANGTGVSLSLT 68

Query: 65  ------KIGVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                    V        F  P  P  + +       V++  E  +  + +  Y  +L  
Sbjct: 69  SARHIPASTVQPPDLDLLFRVPDQPAMDGN------TVDMDRERTNFADNSLKYQTDLTV 122

Query: 118 I-KQSHDMMT 126
           +  Q   MM+
Sbjct: 123 LGGQIKGMMS 132


>gi|330826756|ref|YP_004390059.1| flagellar basal-body rod protein FlgF [Alicycliphilus denitrificans
           K601]
 gi|329312128|gb|AEB86543.1| flagellar basal-body rod protein FlgF [Alicycliphilus denitrificans
           K601]
          Length = 246

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 6/35 (17%), Positives = 16/35 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +G ++  NVN +     M    R +   ++ ++ +
Sbjct: 197 AGALEGSNVNPVESMVGMIAAARQFEQQMRLLQTA 231


>gi|260222464|emb|CBA32054.1| Flagellar basal-body rod protein flgB [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 166

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 17/130 (13%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L  +  R  +I+ NIANA T G +     +++           +          D  T  
Sbjct: 38  LRAERQR--VIASNIANADTPGYSGRDFDFKKAMAEATSGPTIALAPPSSGTPAD-GTTN 94

Query: 75  EEFDPGHPVA-------NASGIV--KYPN-----VNVLVETADMRETNRLYMANLQTIKQ 120
               P  P+        N  G      P      V++  E A+  + +  Y A L+ I  
Sbjct: 95  NRHIPLTPIEGSSIGDNNKLGYTIQTQPAMDGNSVDLDRERANFVDNSVRYEATLRFING 154

Query: 121 SHDMMTTTLD 130
           S   + + + 
Sbjct: 155 SSRTILSAIQ 164


>gi|283850813|ref|ZP_06368099.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. FW1012B]
 gi|283573736|gb|EFC21710.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. FW1012B]
          Length = 709

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  +M +    Y A  + I  +  +M T L L
Sbjct: 669 SGVNLDEELTNMIKFQHSYQAAAKLISTADQLMETVLGL 707


>gi|157363535|ref|YP_001470302.1| flagellar hook-associated protein FlgK [Thermotoga lettingae TMO]
 gi|157314139|gb|ABV33238.1| flagellar hook-associated protein FlgK [Thermotoga lettingae TMO]
          Length = 841

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 17/36 (47%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V++  E  +M +    + A+ + I    +M+   +D
Sbjct: 799 VSLDEEMTNMIQYQHAFNASARVITTIDEMIGRVID 834


>gi|32265682|ref|NP_859714.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449]
 gi|32261730|gb|AAP76780.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449]
          Length = 745

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+V     ++    R Y  N +      D++   L+L R
Sbjct: 701 HLETSNVDVGNALTELIVMQRGYSMNARAFTTGDDLIKEALNLKR 745



 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          SG+      +  IS NIAN  T G       YR     FE +   +
Sbjct: 10 SGIKTHQFGLDSISNNIANVNTIG-------YRENIPQFETLFANN 48


>gi|66046700|ref|YP_236541.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          syringae B728a]
 gi|63257407|gb|AAY38503.1| Flagellar basal body rod protein:Protein of unknown function
          DUF1078 [Pseudomonas syringae pv. syringae B728a]
          Length = 686

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G  V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVLTTASAQIALGQGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|313681188|ref|YP_004058926.1| flagellar hook protein flge [Sulfuricurvum kujiense DSM 16994]
 gi|313154048|gb|ADR32726.1| flagellar hook protein FlgE [Sulfuricurvum kujiense DSM 16994]
          Length = 758

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++      +    R Y AN +TI  S  ++ T L + R
Sbjct: 716 EASNVDLSKSLTQLIIIQRGYQANGKTITTSDTLLETLLGIKR 758



 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++ S     +GL      M + S NIAN  T G       Y+    +F +++  + 
Sbjct: 1  MLRSLFAGVTGLQAHQIAMDVESNNIANVNTIG-------YKYSRANFSDLLAQTS 49


>gi|239815253|ref|YP_002944163.1| flagellar basal body protein [Variovorax paradoxus S110]
 gi|239801830|gb|ACS18897.1| flagellar basal body protein [Variovorax paradoxus S110]
          Length = 127

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 11/101 (10%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            L   S R Q I+ NIANA   G       Y  + +SFE+ +  +     +   +D    
Sbjct: 16  ALDAASLRQQAIATNIANANAVG-------YVPQRVSFEDQLADARSTLAQSGRLDAFAL 68

Query: 74  VEEFDPGHPVANASGI-VKYPNVNVLVETADMRETNRLYMA 113
            +      P A+  G+ V+   V +  E ADM      Y A
Sbjct: 69  SQVRPRIEPAADDLGVPVQ---VQLDAEAADMARNAVHYQA 106


>gi|304390261|ref|ZP_07372215.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326743|gb|EFL93987.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 687

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 17/39 (43%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V++  E  ++ +    Y    + +   + M+   +++ R
Sbjct: 649 VDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALINIGR 687



 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 21/81 (25%)

Query: 1  MDYLIASAHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------- 49
          M    +S +   +GL A Q   +++  +NI N  T G       Y R+ +          
Sbjct: 1  MGSTFSSLNAGLTGLYAAQRL-IEVSGQNINNMNTPG-------YTRQRVEQRALGIGSE 52

Query: 50 --SFEEVMHGSGGVRVKKIGV 68
             F   +   GGV + +I  
Sbjct: 53 PSVFAGSVPQGGGVEITRIRR 73


>gi|217076647|ref|YP_002334363.1| flagellar hook-associated protein 1 [Thermosipho africanus TCF52B]
 gi|217036500|gb|ACJ75022.1| flagellar hook-associated protein 1 [Thermosipho africanus TCF52B]
          Length = 847

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 18/36 (50%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V++  E A+M +    + A+ + +    +M+   +D
Sbjct: 805 VSLDEEMANMIKFQHAFNASARVMTAVDEMIGRVID 840


>gi|209695756|ref|YP_002263686.1| flagellar hook-associated protein FlgK [Aliivibrio salmonicida
           LFI1238]
 gi|208009709|emb|CAQ80013.1| flagellar hook-associated protein type 3 FlgM [Aliivibrio
           salmonicida LFI1238]
          Length = 626

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 38/130 (29%), Gaps = 25/130 (19%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SGGVRVKKIG 67
           L  Q   +   S NI N  T G       + R+++  E  M           GV V  + 
Sbjct: 14  LTAQRQ-LNTTSHNINNVNTEG-------FSRQSVVQETNMPHWVSGANLGAGVHVAAVR 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSH 122
                F       + +  ++  + Y      N++VL          R+            
Sbjct: 66  RSFDQFA-----TNELNLSTTNLNYSMDTEANLDVLTNMMSSIGAKRIPENINDWFDAVK 120

Query: 123 DMMTTTLDLL 132
            +  +  ++ 
Sbjct: 121 TLSDSPNEIG 130


>gi|54307267|ref|YP_128287.1| flagellar basal body rod protein FlgB [Photobacterium profundum
           SS9]
 gi|46911687|emb|CAG18485.1| Hypothetical FlgB putative flagellar basal-body rod protein
           [Photobacterium profundum SS9]
          Length = 139

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 18/110 (16%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-VRVKKIGVDQSTF 73
           LA ++ R ++++ N+AN  T         Y+ + ISFE+ M    G  R K     +S  
Sbjct: 30  LAFRTQRAKVLASNLANVDTPN-------YKARDISFEDAMSQIAGEARAKHQARFRSQP 82

Query: 74  VEE---F-DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +    + +P  P  + +       V + +E A        +  ++  + 
Sbjct: 83  PKIELLYRNPQQPAQDGN------TVELGIEQAKFASNAMAFETSMSFLN 126


>gi|289670509|ref|ZP_06491584.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 141

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 92  SGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 138


>gi|258622485|ref|ZP_05717507.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573]
 gi|258625237|ref|ZP_05720149.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603]
 gi|262173351|ref|ZP_06041028.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451]
 gi|258582484|gb|EEW07321.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603]
 gi|258585185|gb|EEW09912.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573]
 gi|261890709|gb|EEY36696.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451]
          Length = 120

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 7/50 (14%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  +  R ++++ N+AN  T G       Y  K +SF  VM+ +G   V
Sbjct: 15 ALNFRVQRTKVLASNLANVDTPG-------YLAKDLSFTTVMNQTGSGSV 57


>gi|315657526|ref|ZP_07910408.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315491998|gb|EFU81607.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 688

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 17/39 (43%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V++  E  ++ +    Y    + +   + M+   +++ R
Sbjct: 650 VDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALINIGR 688



 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 21/81 (25%)

Query: 1  MDYLIASAHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------- 49
          M    +S +   +GL A Q   +++  +NI N  T G       Y R+ +          
Sbjct: 1  MGSTFSSLNAGLTGLYAAQRL-IEVSGQNINNMNTPG-------YTRQRVEQRALGIGSE 52

Query: 50 --SFEEVMHGSGGVRVKKIGV 68
             F   +   GGV + +I  
Sbjct: 53 PSVFAGSVPQGGGVEITRIRR 73


>gi|167561212|ref|ZP_02354128.1| flagellar hook-associated protein FlgK [Burkholderia oklahomensis
           EO147]
          Length = 668

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 628 SGVNQNEEAANLMQYQQLYQANAKVIQTADSLFKTVLGL 666


>gi|83646789|ref|YP_435224.1| flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
 gi|83634832|gb|ABC30799.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
          Length = 235

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 18/44 (40%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            ++  NVN + E   + E  R Y  +   +K     + + +  L
Sbjct: 189 YLEMSNVNTMEEIVRLVELTRHYQLSHNVLKAYDGSIDSAISTL 232


>gi|293414370|ref|ZP_06657019.1| flagellar basal-body rod protein FlgF [Escherichia coli B185]
 gi|291434428|gb|EFF07401.1| flagellar basal-body rod protein FlgF [Escherichia coli B185]
          Length = 251

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNTVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|291613039|ref|YP_003523196.1| flagellar basal-body rod protein FlgF [Sideroxydans lithotrophicus
           ES-1]
 gi|291583151|gb|ADE10809.1| flagellar basal-body rod protein FlgF [Sideroxydans lithotrophicus
           ES-1]
          Length = 247

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 6/55 (10%)

Query: 80  GHP-VANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           G+P  A+A      G ++  NVN++    +M    R +   ++ ++ + D     
Sbjct: 185 GNPADADAKVTVVSGSLESSNVNMVESMVNMISLARQFDQQMKLLQTADDNAKQA 239


>gi|298345981|ref|YP_003718668.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC
           43063]
 gi|298236042|gb|ADI67174.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC
           43063]
          Length = 687

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 17/39 (43%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V++  E  ++ +    Y    + +   + M+   +++ R
Sbjct: 649 VDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALINIGR 687



 Score = 35.7 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 21/81 (25%)

Query: 1  MDYLIASAHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------- 49
          M    +S +   +GL A Q   +++  +NI N  T G       Y R+ +          
Sbjct: 1  MGSTFSSLNAGLTGLYAAQRL-IEVSGQNINNMNTPG-------YTRQRVEQRALGIGSE 52

Query: 50 --SFEEVMHGSGGVRVKKIGV 68
             F   +   GGV + +I  
Sbjct: 53 PSVFAGSVPQGGGVEITRIRR 73


>gi|188592123|ref|YP_001796721.1| flagellar hook-associated protein flgk [Cupriavidus taiwanensis LMG
           19424]
 gi|170938497|emb|CAP63484.1| FlgK: Flagellar hook-associated protein 1 [Cupriavidus taiwanensis
           LMG 19424]
          Length = 639

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  ET  M    +LY AN + I+ +  +  T + + R
Sbjct: 599 SGVNMDEETVSMLRFQQLYQANARVIQTAGTLFDTIIGIGR 639


>gi|220922288|ref|YP_002497590.1| flagellar hook-associated protein FlgK [Methylobacterium nodulans
           ORS 2060]
 gi|219946895|gb|ACL57287.1| flagellar hook-associated protein FlgK [Methylobacterium nodulans
           ORS 2060]
          Length = 623

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E + + +    Y AN + +  + DM+ T + +
Sbjct: 585 SGVNIDEELSRLIQLQSAYAANARVLTAAKDMIDTLMRI 623


>gi|150021010|ref|YP_001306364.1| flagellar basal-body rod protein FlgB [Thermosipho melanesiensis
          BI429]
 gi|149793531|gb|ABR30979.1| flagellar basal-body rod protein FlgB [Thermosipho melanesiensis
          BI429]
          Length = 127

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 10/54 (18%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
            +  +A   + V   R +I S+NIANA T         Y+RK I FEE+ + S
Sbjct: 6  FNTLKVA---MDVALKRQEIHSQNIANAETPN-------YKRKYIVFEELFNES 49


>gi|86157770|ref|YP_464555.1| flagellar hook-associated protein [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774281|gb|ABC81118.1| flagellar hook-associated protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 469

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  +M    R Y A  + I+ + +M  T L L
Sbjct: 430 SGVSVDEELLEMERAQRAYEAISKVIQATSEMFDTLLKL 468


>gi|167568430|ref|ZP_02361304.1| flagellar hook-associated protein FlgK [Burkholderia oklahomensis
           C6786]
          Length = 668

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 628 SGVNQNEEAANLMQYQQLYQANAKVIQTADSLFKTVLGL 666


>gi|49077262|gb|AAT49657.1| PA1077 [synthetic construct]
          Length = 136

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          +  I    L+ ++ R ++++ N+ANA T         Y+ + + F  V+
Sbjct: 8  ALGIHQQALSFRAQRAEVLANNLANADTPN-------YKARDLDFAAVL 49


>gi|238796901|ref|ZP_04640405.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
           43969]
 gi|238719161|gb|EEQ10973.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
           43969]
          Length = 137

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 50/143 (34%), Gaps = 31/143 (21%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
           D L  +       L++ + R  I++ NIAN  T G       Y  + + F + +  +   
Sbjct: 3   DKLDNALRFQQEALSLLTQRQDILASNIANVDTPG-------YLARDMDFSQQLKNAVDR 55

Query: 59  -------------GGVRVKKIGVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADM 104
                         G  +  +    ++    +  P  P A+ +       V++  E    
Sbjct: 56  SAPDNAPLTLALTSGTHIAGVAPAINSNQLLYRIPDQPSADGN------TVDMDRERVSF 109

Query: 105 RETNRLYMANLQTI-KQSHDMMT 126
            + +  Y ++L  +  Q   MM+
Sbjct: 110 ADNSMKYQSSLTILGSQIKGMMS 132


>gi|99082801|ref|YP_614955.1| flagellar basal body rod protein FlgF [Ruegeria sp. TM1040]
 gi|99039081|gb|ABF65693.1| Flagellar basal-body rod protein flgG [Ruegeria sp. TM1040]
          Length = 238

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 3/52 (5%)

Query: 82  PVANAS---GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           P A A    G ++  NVN + + A M E  R Y      +      + + +D
Sbjct: 182 PAAGAQVLQGFLEGSNVNTIHQLARMIEVQRAYEMGQSFLDHEDKRIRSAID 233


>gi|299068729|emb|CBJ39968.1| flagellar component of cell-proximal portion of basal-body rod,
          protein flgb [Ralstonia solanacearum CMR15]
          Length = 153

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           L ++S R Q+++ NIANA T         Y+ +   F+  +  + G +
Sbjct: 15 ALRLRSQRHQLLASNIANADTPS-------YKARDFDFQSALQKATGQQ 56


>gi|301123495|ref|XP_002909474.1| hypothetical protein PITG_00934 [Phytophthora infestans T30-4]
 gi|262100236|gb|EEY58288.1| hypothetical protein PITG_00934 [Phytophthora infestans T30-4]
          Length = 229

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 76 EFDPGHPVANASGIVKYP 93
          ++DP HP A+  G V+  
Sbjct: 42 KYDPDHPDADWGGYVRRS 59


>gi|86157778|ref|YP_464563.1| flagellar basal body rod protein [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774289|gb|ABC81126.1| flagellar basal body rod protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 235

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG ++  N   L  +  +    R Y A+LQ I+    +    +++ R
Sbjct: 184 AVRSGELELGNAGALEASIQLVAAQRAYEASLQAIQTYRQLDQRAVEVAR 233


>gi|83747657|ref|ZP_00944693.1| FlgB [Ralstonia solanacearum UW551]
 gi|207728343|ref|YP_002256737.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
          MolK2]
 gi|207739740|ref|YP_002258133.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
          IPO1609]
 gi|83725709|gb|EAP72851.1| FlgB [Ralstonia solanacearum UW551]
 gi|206591589|emb|CAQ57201.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
          MolK2]
 gi|206593122|emb|CAQ60028.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
          IPO1609]
          Length = 153

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           L ++S R Q+++ NIANA T         Y+ +   F+  +  + G +
Sbjct: 15 ALRLRSQRHQLLASNIANADTPS-------YKARDFDFQSALQKATGQQ 56


>gi|315654567|ref|ZP_07907473.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC
           51333]
 gi|315491031|gb|EFU80650.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC
           51333]
          Length = 681

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 17/39 (43%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V++  E  ++ +    Y    + +   + M+   +++ R
Sbjct: 643 VDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALINIGR 681



 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 21/81 (25%)

Query: 1  MDYLIASAHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTI---------- 49
          M    +S +   +GL A Q   +++  +NI N  T G       Y R+ +          
Sbjct: 1  MGSTFSSLNAGLTGLYAAQRL-IEVSGQNINNMNTPG-------YTRQRVEQRALGIGSE 52

Query: 50 --SFEEVMHGSGGVRVKKIGV 68
             F   +   GGV + +I  
Sbjct: 53 PSVFAGSVPQGGGVEITRIRR 73


>gi|239834445|ref|ZP_04682773.1| flagellar basal-body rod protein FlgB [Ochrobactrum intermedium LMG
           3301]
 gi|239822508|gb|EEQ94077.1| flagellar basal-body rod protein FlgB [Ochrobactrum intermedium LMG
           3301]
          Length = 126

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 44/128 (34%), Gaps = 36/128 (28%)

Query: 17  VQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVRVKKIGVDQSTF 73
            Q  S R   ++ N+ANA T    P    +R + +  F +V+      + +      S  
Sbjct: 14  AQWLSVRQATVAGNVANANT----PD---FRARDVQPFADVLD-----KTQLTMAATSPL 61

Query: 74  VEEFDPGHPVANASGIV---KYPN-----------VNVLVETADMRETNRLYMANLQTIK 119
                  H  A A GI      P+           V+V  E     E  R Y  N   +K
Sbjct: 62  -------HLEAEADGIAGARLRPDDITEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVK 114

Query: 120 QSHDMMTT 127
             H MM +
Sbjct: 115 AFHRMMLS 122


>gi|312621565|ref|YP_004023178.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
          kronotskyensis 2002]
 gi|312202032|gb|ADQ45359.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          kronotskyensis 2002]
          Length = 133

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 7/35 (20%)

Query: 24 IISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          IIS NIANA T G       Y+ K ++FE  +  S
Sbjct: 24 IISNNIANADTPG-------YKAKDLNFEAFLQRS 51


>gi|308186390|ref|YP_003930521.1| Flagellar basal-body rod protein flgB [Pantoea vagans C9-1]
 gi|308056900|gb|ADO09072.1| Flagellar basal-body rod protein flgB [Pantoea vagans C9-1]
          Length = 137

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----------GSGGVRVK 64
           L  Q    +I++ NIANA T G       Y+ + I F   +            S  ++V 
Sbjct: 18  LRAQRQ--EILASNIANADTPG-------YQARDIDFASELSRVMSNGRAEGSSMALKVT 68

Query: 65  KI--GVDQSTFVEEFD-----PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  Q+      D     P  P A+ +       V++  E     + +  Y  +L  
Sbjct: 69  SARHIEAQTNGAPSMDMLYRIPDQPAADGN------TVDMDRERTQFADNSLKYQTDLTL 122

Query: 118 I-KQSHDMMT 126
           I  Q   MM+
Sbjct: 123 ISSQIKGMMS 132


>gi|319764540|ref|YP_004128477.1| flagellar basal-body rod protein flgf [Alicycliphilus denitrificans
           BC]
 gi|317119101|gb|ADV01590.1| flagellar basal-body rod protein FlgF [Alicycliphilus denitrificans
           BC]
          Length = 246

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 6/35 (17%), Positives = 16/35 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +G ++  NVN +     M    R +   ++ ++ +
Sbjct: 197 AGALEGSNVNPVESMVGMIAAARQFEQQMRLLQTA 231


>gi|258404726|ref|YP_003197468.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM
          5692]
 gi|257796953|gb|ACV67890.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM
          5692]
          Length = 243

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           + +      SG A++  R+Q++S N+AN    G       +++  + FE  +  +   R
Sbjct: 2  PIFSGLAAPLSGAALERTRLQVLSNNLANIDNAG-------FKQDRLLFETQLDNAQAGR 54

Query: 63 VKK 65
            +
Sbjct: 55 TGE 57


>gi|194365683|ref|YP_002028293.1| flagellar basal body rod protein FlgB [Stenotrophomonas
          maltophilia R551-3]
 gi|194348487|gb|ACF51610.1| flagellar basal-body rod protein FlgB [Stenotrophomonas
          maltophilia R551-3]
          Length = 131

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 26/57 (45%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +     +    + ++  RM++I+ N+ NA T G       Y+ + + F+  +  + G
Sbjct: 5  ITDYLGVHAQAMPLREQRMKLIASNLGNADTPG-------YKAQDLDFDAALRHAQG 54


>gi|90408061|ref|ZP_01216232.1| flagellar basal-body rod protein FlgF [Psychromonas sp. CNPT3]
 gi|90310818|gb|EAS38932.1| flagellar basal-body rod protein FlgF [Psychromonas sp. CNPT3]
          Length = 248

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 5/76 (6%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANAS-----GIVKYPNVNVLVETADMRETNRLYMANLQT 117
           ++ I   +       D   P+ +A      G ++  NVN+  E   +    R +   ++ 
Sbjct: 171 IRDILRGEDGLYRRIDGNDPIVDAKVSIESGSLEASNVNMSSELTGLINLQRQFDMQVKM 230

Query: 118 IKQSHDMMTTTLDLLR 133
           +K++ +M   +  LLR
Sbjct: 231 MKKAEEMDKASESLLR 246


>gi|254720613|ref|ZP_05182424.1| flagellar basal body rod protein FlgB [Brucella sp. 83/13]
 gi|265985653|ref|ZP_06098388.1| flagellar basal-body rod protein FlgB [Brucella sp. 83/13]
 gi|306838575|ref|ZP_07471412.1| flagellar basal-body rod protein FlgB [Brucella sp. NF 2653]
 gi|306841052|ref|ZP_07473776.1| flagellar basal-body rod protein FlgB [Brucella sp. BO2]
 gi|264664245|gb|EEZ34506.1| flagellar basal-body rod protein FlgB [Brucella sp. 83/13]
 gi|306288941|gb|EFM60241.1| flagellar basal-body rod protein FlgB [Brucella sp. BO2]
 gi|306406361|gb|EFM62603.1| flagellar basal-body rod protein FlgB [Brucella sp. NF 2653]
          Length = 126

 Score = 36.4 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 43/128 (33%), Gaps = 36/128 (28%)

Query: 17  VQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVRVKKIGVDQSTF 73
            Q  S R   ++ N+ANA T    P    +R + +  F +V+  +               
Sbjct: 14  AQWLSVRQATVAGNVANANT----PD---FRARDVQPFADVLDKTQLTMAAT-------- 58

Query: 74  VEEFDPGHPVANASGIVK---YPN-----------VNVLVETADMRETNRLYMANLQTIK 119
                P H  A A GI      P+           V+V  E     E  R Y  N   +K
Sbjct: 59  ----SPLHLEAEADGIAATRLRPDDITEQTHSGNTVDVEQEMMKAGEIAREYSLNTSIVK 114

Query: 120 QSHDMMTT 127
             H MM +
Sbjct: 115 AFHRMMLS 122


>gi|254524155|ref|ZP_05136210.1| flagellar hook-associated protein FlgK [Stenotrophomonas sp. SKA14]
 gi|219721746|gb|EED40271.1| flagellar hook-associated protein FlgK [Stenotrophomonas sp. SKA14]
          Length = 626

 Score = 36.4 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             VN+  E ADM    + Y A  Q I  +  M  T L
Sbjct: 585 SGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621


>gi|254485859|ref|ZP_05099064.1| flagellar basal-body rod protein FlgF [Roseobacter sp. GAI101]
 gi|214042728|gb|EEB83366.1| flagellar basal-body rod protein FlgF [Roseobacter sp. GAI101]
          Length = 237

 Score = 36.4 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            G  +  NV+ + + A M E  R Y      ++   + + T L
Sbjct: 190 QGFTEGSNVDAVSQLARMIEVQRAYEMGQSFLESEDERIRTAL 232


>gi|190574257|ref|YP_001972102.1| flagellar hook-associated protein FlgK [Stenotrophomonas
           maltophilia K279a]
 gi|190012179|emb|CAQ45802.1| putative flagellar hook-associated protein [Stenotrophomonas
           maltophilia K279a]
          Length = 626

 Score = 36.4 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             VN+  E ADM    + Y A  Q I  +  M  T L
Sbjct: 585 SGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621


>gi|157164728|ref|YP_001466716.1| flagellar hook-associated protein FlgK [Campylobacter concisus
          13826]
 gi|157101468|gb|EAT97207.2| flagellar hook-associated protein FlgK [Campylobacter concisus
          13826]
          Length = 623

 Score = 36.4 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 29/91 (31%), Gaps = 17/91 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------V 54
          M  +  S     SGL     ++     NI NA +       + Y R+ +          V
Sbjct: 1  MANIFMSLGTGVSGLNAAQVQISTTGNNITNADS-------NYYTRQRVVQSASPAMNTV 53

Query: 55 MHGSG-GVRVKKIGVDQSTF---VEEFDPGH 81
            G G G +V  +      F     ++   +
Sbjct: 54 PGGVGTGTQVDTVTRLHDEFAYSRLKYSSSN 84


>gi|186477704|ref|YP_001859174.1| flagellar hook-associated protein FlgK [Burkholderia phymatum
           STM815]
 gi|184194163|gb|ACC72128.1| flagellar hook-associated protein FlgK [Burkholderia phymatum
           STM815]
          Length = 657

 Score = 36.4 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A++ +  +LY AN + I+ +  +  T L +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTILGI 655


>gi|89092133|ref|ZP_01165088.1| Flagellar basal-body rod protein FlgB [Oceanospirillum sp. MED92]
 gi|89083868|gb|EAR63085.1| Flagellar basal-body rod protein FlgB [Oceanospirillum sp. MED92]
          Length = 131

 Score = 36.4 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 18/107 (16%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R ++++ NIANA T         ++ + + F   +  +  ++VK+         +  +P 
Sbjct: 22  RAEVLANNIANADTPN-------FKARDMEFAHALEHASQMQVKQTATSSGHKTQLLEPD 74

Query: 81  HPVANASGIVKYPN--------VNVLVETADMRETNRLYMANLQTIK 119
             +A A  + + PN        V +  E A   E    Y  + Q + 
Sbjct: 75  --LA-ADMMYRIPNQASVDGNTVELQQEMARYTENALDYQTSFQFLN 118


>gi|289679013|ref|ZP_06499903.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          syringae FF5]
          Length = 560

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G  V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVLTTASAQIALGQGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|188527163|ref|YP_001909850.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori
          Shi470]
 gi|188143403|gb|ACD47820.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori
          Shi470]
          Length = 269

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 11 ANSGLAVQSARMQIISENIANART 34
          A   +A Q  R+ + S N+AN  T
Sbjct: 8  ATGAMAAQFNRLDLTSNNLANLNT 31


>gi|310764863|gb|ADP09813.1| Flagellar basal-body rod protein FlgB [Erwinia sp. Ejp617]
          Length = 147

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 33/132 (25%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--------GGVRVKK 65
            L++ S R ++++ NIANA T G       Y  + I F + +  +          V +  
Sbjct: 27  ALSLLSRRQEVLASNIANADTPG-------YMARDIDFSQQLKNTLANQSMAKSPVSLSL 79

Query: 66  IGV----------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                        D +  +    P  P A+ +       V++  E   M +TN  Y + L
Sbjct: 80  TAEKHIEGKGRLFDDANLLYR-TPDQPSADGN------TVDMDRERIGMADTNVKYQSGL 132

Query: 116 QTIKQ-SHDMMT 126
             +      MM+
Sbjct: 133 TFLGADIKKMMS 144


>gi|255521215|ref|ZP_05388452.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           J1-175]
          Length = 99

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 62  VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 99


>gi|91785627|ref|YP_560833.1| flagellar hook-associated protein FlgK [Burkholderia xenovorans
           LB400]
 gi|91689581|gb|ABE32781.1| Flagellar hook-associated protein [Burkholderia xenovorans LB400]
          Length = 657

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++ +  +LY AN + I+ +  +  T L + +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTILGIFQ 657


>gi|15596274|ref|NP_249768.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
          PAO1]
 gi|107100522|ref|ZP_01364440.1| hypothetical protein PaerPA_01001547 [Pseudomonas aeruginosa
          PACS2]
 gi|116049006|ref|YP_792192.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
          UCBPP-PA14]
 gi|218892959|ref|YP_002441828.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
          LESB58]
 gi|254234213|ref|ZP_04927536.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          C3719]
 gi|254239435|ref|ZP_04932757.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          2192]
 gi|296390559|ref|ZP_06880034.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
          PAb1]
 gi|313106032|ref|ZP_07792291.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          39016]
 gi|9946993|gb|AAG04466.1|AE004539_8 flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          PAO1]
 gi|115584227|gb|ABJ10242.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          UCBPP-PA14]
 gi|126166144|gb|EAZ51655.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          C3719]
 gi|126192813|gb|EAZ56876.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          2192]
 gi|218773187|emb|CAW28999.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          LESB58]
 gi|310878793|gb|EFQ37387.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          39016]
          Length = 135

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          +  I    L+ ++ R ++++ N+ANA T         Y+ + + F  V+
Sbjct: 8  ALGIHQQALSFRAQRAEVLANNLANADTPN-------YKARDLDFAAVL 49


>gi|330953732|gb|EGH53992.1| flagellar hook-associated protein FlgK [Pseudomonas syringae Cit
          7]
          Length = 686

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G  V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVLTTASAQIALGQGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|295401181|ref|ZP_06811154.1| flagellar hook-associated protein FlgK [Geobacillus
          thermoglucosidasius C56-YS93]
 gi|294976774|gb|EFG52379.1| flagellar hook-associated protein FlgK [Geobacillus
          thermoglucosidasius C56-YS93]
          Length = 530

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 7/51 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          M        +A  G+  Q A + + + NIANA T G       Y R+ ++F
Sbjct: 1  MLSTFHGLEVAKRGMFTQQAALYVTAHNIANANTPG-------YSRQRVNF 44


>gi|255321465|ref|ZP_05362623.1| flagellar basal-body rod protein FlgB [Campylobacter showae
          RM3277]
 gi|255301321|gb|EET80580.1| flagellar basal-body rod protein FlgB [Campylobacter showae
          RM3277]
          Length = 145

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 7/47 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S LA ++ R Q+IS NIAN  T         Y+ + I+FE  +  + 
Sbjct: 16 SALASRNLRQQMISSNIANIDT-------PFYKARDIAFEAALSQTA 55


>gi|254463526|ref|ZP_05076942.1| flagellar basal-body rod protein FlgB [Rhodobacterales bacterium
          HTCC2083]
 gi|206680115|gb|EDZ44602.1| flagellar basal-body rod protein FlgB [Rhodobacteraceae bacterium
          HTCC2083]
          Length = 128

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 19/92 (20%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M+ L        S L+++SAR  +++ NIANA     TPG   Y+ + + F+  M    G
Sbjct: 1  MNALKEHISFQASALSLRSARNNMLASNIANA----ATPG---YKARDMDFDREMSARIG 53

Query: 61 ---VRVK---------KIGVDQSTFVEEFDPG 80
             VR+           +G D+  + +  +P 
Sbjct: 54 DSPVRMSAPRHVNNLTGVGADRVQYRQPLNPS 85


>gi|330972421|gb|EGH72487.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          aceris str. M302273PT]
          Length = 686

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G  V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVLTTASAQIALGQGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|296157449|ref|ZP_06840284.1| flagellar hook-associated protein FlgK [Burkholderia sp. Ch1-1]
 gi|295892221|gb|EFG72004.1| flagellar hook-associated protein FlgK [Burkholderia sp. Ch1-1]
          Length = 657

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++ +  +LY AN + I+ +  +  T L + +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTILGIFQ 657


>gi|187925754|ref|YP_001897396.1| flagellar hook-associated protein FlgK [Burkholderia phytofirmans
           PsJN]
 gi|187716948|gb|ACD18172.1| flagellar hook-associated protein FlgK [Burkholderia phytofirmans
           PsJN]
          Length = 657

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++ +  +LY AN + I+ +  +  T L + +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTILGIFQ 657


>gi|119385424|ref|YP_916480.1| flagellar hook-associated protein FlgK [Paracoccus denitrificans
           PD1222]
 gi|119375191|gb|ABL70784.1| flagellar hook-associated protein FlgK [Paracoccus denitrificans
           PD1222]
          Length = 486

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+   E   +    R Y AN +  + ++DM+   L L
Sbjct: 449 VDSDKEMESLLALERAYAANAKVFQTANDMLDAILRL 485



 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 8/66 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-HGSGGVR 62
          + ++   A SGL   S  ++I+S NIANA T G       + R+ +          GGV 
Sbjct: 3  ISSAISNAVSGLTAASRGIEIVSSNIANALTPG-------HARRELDLSSRPSEHGGGVN 55

Query: 63 VKKIGV 68
          +  +  
Sbjct: 56 IDGVSR 61


>gi|330943214|gb|EGH45621.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          pisi str. 1704B]
          Length = 686

 Score = 36.1 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G  V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVLTTASAQIALGQGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|330975982|gb|EGH76048.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          aptata str. DSM 50252]
          Length = 686

 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G  V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVLTTASAQIALGQGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|306846281|ref|ZP_07478842.1| flagellar basal-body rod protein FlgB [Brucella sp. BO1]
 gi|306273276|gb|EFM55145.1| flagellar basal-body rod protein FlgB [Brucella sp. BO1]
          Length = 126

 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 30/125 (24%)

Query: 17  VQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSG-----------GVR 62
            Q  S R   ++ N+ANA T    P    +R + +  F +V+  +               
Sbjct: 14  AQWLSVRQATVAGNVANANT----PD---FRARDVQPFADVLDKTQLTMAATSPLHLEAE 66

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
              I   +    +  +  H     SG      V+V  E     E  R Y  N   +K  H
Sbjct: 67  ADGIAATRLRPDDVTEQTH-----SGN----TVDVEQEMMKAGEIAREYSLNTSIVKAFH 117

Query: 123 DMMTT 127
            MM +
Sbjct: 118 RMMLS 122


>gi|285018208|ref|YP_003375919.1| flagellar basal-body rod protein flgf [Xanthomonas albilineans GPE
           PC73]
 gi|283473426|emb|CBA15931.1| probable flagellar basal-body rod protein flgf [Xanthomonas
           albilineans]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 20/47 (42%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +G ++  NV+       M +  R +   ++ IK   +   +   LLR
Sbjct: 202 TGALEGSNVDAAGALVQMIQLQRQFEMQVKVIKNGDENAQSANTLLR 248


>gi|325288805|ref|YP_004264986.1| flagellar basal-body rod protein FlgB [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324964206|gb|ADY54985.1| flagellar basal-body rod protein FlgB [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 132

 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 27/136 (19%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            +I   GL   S R +++++NIAN  T         +++  ++FE V+  +       IG
Sbjct: 10  LNILEGGLDGLSLRNKVLADNIANVDTPN-------FKKSDVNFEAVLQEA-------IG 55

Query: 68  VDQSTFVEEFDPGH-P-VANASGIV-----------KYPNVNVLVETADMRETNRLYMAN 114
            DQ+  ++   PGH P V  ++G V              NV+V +E + + E    Y A 
Sbjct: 56  EDQALPMKMSLPGHLPGVGASAGTVVLQDNSTTIRNDGNNVDVDLEMSKVAENTLHYNAL 115

Query: 115 LQTIKQSHDMMTTTLD 130
            Q +     M+   + 
Sbjct: 116 AQALISQFTMLKQAMR 131


>gi|283782100|ref|YP_003372855.1| flagellar basal body FlaE domain-containing protein [Pirellula
          staleyi DSM 6068]
 gi|283440553|gb|ADB18995.1| flagellar basal body FlaE domain protein [Pirellula staleyi DSM
          6068]
          Length = 815

 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          L ++   A +G+     ++ ++  N+AN++T G       ++     F  
Sbjct: 3  LASALTTALTGMTAAETQIDVVGNNLANSQTVG-------FKASDSVFAT 45


>gi|207108815|ref|ZP_03242977.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1]
          Length = 167

 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|148557912|ref|YP_001257210.1| flagellar basal body rod protein FlgB [Brucella ovis ATCC 25840]
 gi|148369197|gb|ABQ62069.1| flagellar basal-body rod protein FlgB [Brucella ovis ATCC 25840]
          Length = 126

 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 30/125 (24%)

Query: 17  VQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSG-----------GVR 62
            Q  S R   ++ N+ANA T    P    +R + +  F +V+  +               
Sbjct: 14  AQWLSVRQATVAGNVANANT----PD---FRARDVQPFADVLDKTQLTMTATSPLYLEAE 66

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
              I   +    +  +  H     SG      V+V  E     E  R Y  N   +K  H
Sbjct: 67  ADGIAATRLRPDDVTEQTH-----SGN----TVDVEQEMMKAGEIAREYSLNTSIVKAFH 117

Query: 123 DMMTT 127
            MM +
Sbjct: 118 RMMLS 122


>gi|46204472|ref|ZP_00049951.2| COG1256: Flagellar hook-associated protein [Magnetospirillum
          magnetotacticum MS-1]
          Length = 181

 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 9/73 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +   A +GL V  A++ ++S+NIAN  T G       Y R+T+S      G+ GV   
Sbjct: 3  LDAFSTATAGLRVTQAQIGVVSQNIANVGTAG-------YVRRTLSPVTSGTGNAGVATG 55

Query: 65 KIGV--DQSTFVE 75
           I    D +   +
Sbjct: 56 TIARALDTAALKQ 68


>gi|171321214|ref|ZP_02910184.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
 gi|171093524|gb|EDT38694.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
          Length = 234

 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           A G V+  NV+   +   + E  R      + +    D+M + L 
Sbjct: 185 AQGFVETSNVSAADDMVRLIEAMRRVETGQKLVHAYDDLMGSVLQ 229


>gi|91794994|ref|YP_564645.1| flagellar basal-body rod FlgF [Shewanella denitrificans OS217]
 gi|91716996|gb|ABE56922.1| Flagellar basal-body rod FlgF [Shewanella denitrificans OS217]
          Length = 244

 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 11/40 (27%)

Query: 1  MDYLIASAHIANSG----LAVQSARMQIISENIANARTTG 36
          MD ++ +   A SG    +  QS R    + N+ANA TTG
Sbjct: 1  MDKMLYT---AASGASRIMEAQSIR----ANNLANAETTG 33



 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 22/49 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            SG ++  NV  + E     + +R +   ++ +K +  +      L+R+
Sbjct: 195 DSGYLESSNVQAVSELIASMDLSRQFEIQVKLMKSAEKLAEAGNRLIRN 243


>gi|311280016|ref|YP_003942247.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1]
 gi|308749211|gb|ADO48963.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 19/47 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            SG+++  NV  +   ADM  + R +   ++ I            LL
Sbjct: 202 QSGVLEGSNVKAVAAMADMISSARRFEMQMKVISSVDTNEQKANQLL 248


>gi|194365674|ref|YP_002028284.1| flagellar hook-associated protein FlgK [Stenotrophomonas
           maltophilia R551-3]
 gi|194348478|gb|ACF51601.1| flagellar hook-associated protein FlgK [Stenotrophomonas
           maltophilia R551-3]
          Length = 626

 Score = 36.1 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             VN+  E ADM    + Y A  Q I  +  M  T L
Sbjct: 585 SGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621


>gi|332674371|gb|AEE71188.1| flagellar basal-body rod protein FlgB [Helicobacter pylori 83]
          Length = 140

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 8/55 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          MD+   +  +    L  ++ R  +I+ NIAN  T         YR K + FE V+
Sbjct: 1  MDF-SKAFGLVYKALDYRALRQDMIASNIANVDT-------PFYRPKDLDFESVL 47


>gi|116626183|ref|YP_828339.1| flagellar hook-associated protein FlgK [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116229345|gb|ABJ88054.1| flagellar hook-associated protein FlgK [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 475

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +Y  V++  E   + +  R Y AN + +    ++  T +D+L+
Sbjct: 432 QYQGVSLDEEATTLMQFQRAYQANAKYLSVLDELTQTAIDILK 474


>gi|167585200|ref|ZP_02377588.1| flagellar hook-associated protein FlgK [Burkholderia ubonensis Bu]
          Length = 656

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 616 SGVNQNEEAANLMQYQQLYQANAKVIQTASTLFQTVLGL 654


>gi|158320509|ref|YP_001513016.1| flagellar basal-body rod protein FlgB [Alkaliphilus oremlandii
          OhILAs]
 gi|158140708|gb|ABW19020.1| flagellar basal-body rod protein FlgB [Alkaliphilus oremlandii
          OhILAs]
          Length = 131

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +  + +I    L     R ++I+ NIANA T         ++R  + FE+V+ 
Sbjct: 1  MYNNINILTKALDASWRRNEVITNNIANAETPN-------FKRSDVIFEDVLR 46


>gi|327478815|gb|AEA82125.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri DSM
           4166]
          Length = 459

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  ++    + Y AN++ I  S+D+    L +
Sbjct: 420 SAVNLDEEAVNLMAYEQAYQANMKVISTSNDLFNAVLAM 458


>gi|300696910|ref|YP_003747571.1| flagellar component of cell-proximal portion of basal-body rod,
          protein flgb [Ralstonia solanacearum CFBP2957]
 gi|299073634|emb|CBJ53154.1| flagellar component of cell-proximal portion of basal-body rod,
          protein flgb [Ralstonia solanacearum CFBP2957]
          Length = 153

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           L ++S R Q+++ NIANA T         Y+ +   F+  +  + G +
Sbjct: 15 ALRLRSQRHQLLASNIANADTPS-------YKARDFDFQSALQKATGQQ 56


>gi|88811802|ref|ZP_01127056.1| hypothetical protein NB231_05335 [Nitrococcus mobilis Nb-231]
 gi|88791193|gb|EAR22306.1| hypothetical protein NB231_05335 [Nitrococcus mobilis Nb-231]
          Length = 246

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NVN +    +M    R + A ++ ++ +     T   LLR
Sbjct: 198 SGALESSNVNTVDALVNMIGNARRFEAYVKLMESAKSNDETGQRLLR 244


>gi|317492431|ref|ZP_07950860.1| flagellar basal-body rod protein FlgB [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919770|gb|EFV41100.1| flagellar basal-body rod protein FlgB [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 149

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 21/124 (16%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQSTF 73
           L  Q    +I++ NIANA T G       ++ + I F   +  +    RV   GV+  T 
Sbjct: 30  LRAQRQ--EILAANIANADTPG-------FQARDIDFSSQLTRAIEQGRVNGSGVELKTT 80

Query: 74  VEEFDPGHPVANA--SGIVKYPN--------VNVLVETADMRETNRLYMANLQTIK-QSH 122
                P           + + P+        V++  E     + +  Y  +L  I  Q  
Sbjct: 81  SSRHIPAQSFQPPELDMLYRVPDQPSLDGNTVDMDRERTQFADNSLRYQTDLTVISGQIK 140

Query: 123 DMMT 126
            MM+
Sbjct: 141 SMMS 144


>gi|161594054|ref|NP_901379.2| flagellar hook-associated protein FlgK [Chromobacterium violaceum
          ATCC 12472]
          Length = 455

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 14/68 (20%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------G 60
           + A SG       +   S+NIAN +T G       Y R+ +       G+G       G
Sbjct: 4  INNALSGAQAAQVALNTASQNIANQQTPG-------YSRQGVVLATQAPGAGDPLSAGYG 56

Query: 61 VRVKKIGV 68
          V V  +  
Sbjct: 57 VNVSNVRR 64



 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 19/34 (55%)

Query: 99  VETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            E   + E  ++Y AN++ I  ++ +  +TL +L
Sbjct: 422 EEAVSLIEYQKMYQANMKVIAVANQLFESTLAIL 455


>gi|51596012|ref|YP_070203.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           IP 32953]
 gi|153947059|ref|YP_001401289.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           IP 31758]
 gi|170024646|ref|YP_001721151.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           YPIII]
 gi|51589294|emb|CAH20915.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           IP 32953]
 gi|152958554|gb|ABS46015.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           IP 31758]
 gi|169751180|gb|ACA68698.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           YPIII]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I+   +   +   LL
Sbjct: 204 GVLEGSNVKAVEAMTDMIANARSFEMQMKVIQSVDENEQSANQLL 248


>gi|51246505|ref|YP_066389.1| flagellar basal-body rod protein (FlgB) [Desulfotalea
          psychrophila LSv54]
 gi|50877542|emb|CAG37382.1| related to flagellar basal-body rod protein (FlgB) [Desulfotalea
          psychrophila LSv54]
          Length = 137

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 7/36 (19%)

Query: 23 QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++IS NIANA T G       Y  +  +FEE +  +
Sbjct: 26 EVISSNIANAETPG-------YAARRFNFEEDLQKA 54


>gi|32266375|ref|NP_860407.1| flagellar hook-associated protein FlgK [Helicobacter hepaticus ATCC
           51449]
 gi|32262425|gb|AAP77473.1| flagellar hook-associated protein FlgK [Helicobacter hepaticus ATCC
           51449]
          Length = 606

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++ +    Y AN + I     M+ T L +
Sbjct: 566 SQVSLDEEMVNLIKFQGGYAANAKVITTIDRMIETLLGI 604



 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 7/49 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
          M  +++S + + +GL      + +   NI+NA         + Y R+ +
Sbjct: 1  MGGILSSLNTSYTGLQAHQLMVDVTGNNISNAS-------DEFYSRQRV 42


>gi|15801194|ref|NP_287211.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           EDL933]
 gi|15830709|ref|NP_309482.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. Sakai]
 gi|168747147|ref|ZP_02772169.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4113]
 gi|168758630|ref|ZP_02783637.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4401]
 gi|168764489|ref|ZP_02789496.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4501]
 gi|168767736|ref|ZP_02792743.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4486]
 gi|168773922|ref|ZP_02798929.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4196]
 gi|168790012|ref|ZP_02815019.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC869]
 gi|168802022|ref|ZP_02827029.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC508]
 gi|195935467|ref|ZP_03080849.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. EC4024]
 gi|208805942|ref|ZP_03248279.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4206]
 gi|208815658|ref|ZP_03256837.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4045]
 gi|208822437|ref|ZP_03262756.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4042]
 gi|209397223|ref|YP_002269923.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4115]
 gi|217328081|ref|ZP_03444163.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. TW14588]
 gi|254792459|ref|YP_003077296.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. TW14359]
 gi|261227018|ref|ZP_05941299.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256252|ref|ZP_05948785.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282097|ref|YP_003498915.1| Flagellar basal-body rod protein FlgF [Escherichia coli O55:H7 str.
           CB9615]
 gi|12514615|gb|AAG55823.1|AE005317_12 flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. EDL933]
 gi|13360919|dbj|BAB34878.1| flagellar rod protein flgF [Escherichia coli O157:H7 str. Sakai]
 gi|187770508|gb|EDU34352.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4196]
 gi|188018201|gb|EDU56323.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4113]
 gi|189354581|gb|EDU73000.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4401]
 gi|189363129|gb|EDU81548.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4486]
 gi|189365533|gb|EDU83949.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4501]
 gi|189370455|gb|EDU88871.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC869]
 gi|189375940|gb|EDU94356.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC508]
 gi|208725743|gb|EDZ75344.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4206]
 gi|208732306|gb|EDZ80994.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4045]
 gi|208737922|gb|EDZ85605.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4042]
 gi|209158623|gb|ACI36056.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4115]
 gi|209773368|gb|ACI84996.1| flagellar rod protein flgF [Escherichia coli]
 gi|209773370|gb|ACI84997.1| flagellar rod protein flgF [Escherichia coli]
 gi|209773372|gb|ACI84998.1| flagellar rod protein flgF [Escherichia coli]
 gi|209773374|gb|ACI84999.1| flagellar rod protein flgF [Escherichia coli]
 gi|209773376|gb|ACI85000.1| flagellar rod protein flgF [Escherichia coli]
 gi|217318508|gb|EEC26934.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. TW14588]
 gi|254591859|gb|ACT71220.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. TW14359]
 gi|290761970|gb|ADD55931.1| Flagellar basal-body rod protein FlgF [Escherichia coli O55:H7 str.
           CB9615]
 gi|320189760|gb|EFW64416.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC1212]
 gi|320637528|gb|EFX07328.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. G5101]
 gi|320643089|gb|EFX12290.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H-
           str. 493-89]
 gi|320648547|gb|EFX17202.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H-
           str. H 2687]
 gi|320653861|gb|EFX21935.1| flagellar basal body rod protein FlgF [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659341|gb|EFX26910.1| flagellar basal body rod protein FlgF [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|326339299|gb|EGD63113.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. 1125]
 gi|326344740|gb|EGD68488.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. 1044]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|330875990|gb|EGH10139.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          morsprunorum str. M302280PT]
          Length = 686

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G+ V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVMTTASAQINIGLGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|289651639|ref|ZP_06482982.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          aesculi str. 2250]
          Length = 686

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G+ V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVMTTASAQINIGLGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|289627770|ref|ZP_06460724.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          aesculi str. NCPPB3681]
 gi|330866430|gb|EGH01139.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          aesculi str. 0893_23]
          Length = 686

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G+ V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVMTTASAQINIGLGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|330967091|gb|EGH67351.1| flagellar hook protein FlgE [Pseudomonas syringae pv. actinidiae
          str. M302091]
          Length = 586

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   + 
Sbjct: 2  SFNTAISGINAANKRLEVAGNNIANSGTVG-------FKSSRAQFSALYSSAQ 47



 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           G ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 542 GALEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|320664476|gb|EFX31627.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. LSU-61]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|218557959|ref|YP_002390872.1| flagellar basal body rod protein FlgF [Escherichia coli S88]
 gi|218364728|emb|CAR02418.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli S88]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARCFEMQMKVISSVDDNAGRANQLL 248


>gi|254251198|ref|ZP_04944516.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158]
 gi|124893807|gb|EAY67687.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158]
          Length = 655

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  + Y AN + I+ +  +  T L L
Sbjct: 615 SGVNQNEEAANLMQYQQYYQANAKVIQTAATLFQTVLGL 653


>gi|257484939|ref|ZP_05638980.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tabaci ATCC 11528]
 gi|49205098|dbj|BAC75962.2| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tabaci]
 gi|330986475|gb|EGH84578.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          lachrymans str. M301315]
 gi|331011049|gb|EGH91105.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tabaci ATCC 11528]
          Length = 686

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G+ V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVMTTASAQINIGLGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|332798814|ref|YP_004460313.1| flagellar hook-associated protein FlgK [Tepidanaerobacter sp.
          Re1]
 gi|332696549|gb|AEE91006.1| flagellar hook-associated protein FlgK [Tepidanaerobacter sp.
          Re1]
          Length = 459

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 16/82 (19%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
          M        IA + L       Q ++ N++NA T G       Y R+ +  E      G 
Sbjct: 1  MQSSFLGIEIAKTALFANQRAQQTVAHNVSNANTPG-------YSRQRVILEATHTAYGM 53

Query: 60 --------GVRVKKIGVDQSTF 73
                  GV+V  +   +  F
Sbjct: 54 GANWQIGTGVKVSDVDRIRDEF 75


>gi|309798071|ref|ZP_07692446.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 145-7]
 gi|308118354|gb|EFO55616.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 145-7]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|167585194|ref|ZP_02377582.1| flagellar hook protein FlgE [Burkholderia ubonensis Bu]
          Length = 269

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 19/94 (20%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----------GVR 62
          SGL+  S  + +I  NIANA T G       ++  T  F ++   S           G R
Sbjct: 8  SGLSGASNALDVIGNNIANANTVG-------FKSSTAQFADMYANSVATSVNTQIGIGTR 60

Query: 63 VKKIGVD--QSTFVEEFDPGHPVANASGIVKYPN 94
          +  +     Q T     +      N +G  +  N
Sbjct: 61 ISSVQQSFGQGTINTTNNALDVAINGNGFFQMSN 94


>gi|146335607|gb|ABQ23406.1| FlgK [Pseudomonas syringae pv. averrhoi]
          Length = 686

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G+ V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVMTTASAQINIGLGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|323190589|gb|EFZ75861.1| flagellar basal-body rod protein FlgF [Escherichia coli RN587/1]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|307823532|ref|ZP_07653761.1| flagellar basal-body rod protein FlgF [Methylobacter tundripaludum
           SV96]
 gi|307735517|gb|EFO06365.1| flagellar basal-body rod protein FlgF [Methylobacter tundripaludum
           SV96]
          Length = 246

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           A G+++  NVN +    DM E  R +    + +K 
Sbjct: 198 AQGVLEGSNVNAISAMVDMIELARNFELQTKVMKS 232


>gi|301168512|emb|CBW28102.1| putative flagellar hook-associated protein 1 [Bacteriovorax marinus
           SJ]
          Length = 487

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 21/39 (53%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V++  E A+M +    Y A+ + ++ + +M  T + + R
Sbjct: 449 VSIDEEAANMVKFQHAYEASAKIMQTADEMFKTVIGIKR 487


>gi|300311349|ref|YP_003775441.1| Flagellar basal-body rod protein FlgB [Herbaspirillum seropedicae
          SmR1]
 gi|300074134|gb|ADJ63533.1| Flagellar basal-body rod FlgB protein [Herbaspirillum seropedicae
          SmR1]
          Length = 142

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 9/44 (20%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L  Q    Q+++ NIANA T         Y+ + ++F + +  +
Sbjct: 18 LRAQRQ--QVLASNIANADTPN-------YKARDVNFADALKNA 52


>gi|300716224|ref|YP_003741027.1| flagellar hook-filament junction protein 1 [Erwinia billingiae
          Eb661]
 gi|299062060|emb|CAX59176.1| Flagellar hook-filament junction protein 1 [Erwinia billingiae
          Eb661]
          Length = 550

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 7/75 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    + A SG+   SA +   S NI+N    G       Y R+T    +      G   
Sbjct: 1  MSNLINTALSGINAASAALNTTSNNISNYSVAG-------YSRQTTVLAQAGSTLSGTNY 53

Query: 64 KKIGVDQSTFVEEFD 78
             GV  ++   E+D
Sbjct: 54 YGNGVSVASVNREYD 68


>gi|270262404|ref|ZP_06190675.1| flagellar basal-body rod protein FlgB [Serratia odorifera 4Rx13]
 gi|270043088|gb|EFA16181.1| flagellar basal-body rod protein FlgB [Serratia odorifera 4Rx13]
          Length = 137

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRVKKIGVDQS 71
           L  Q    +I++ NIANA T G       Y+ + I F   ++     G V    I ++ +
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFAGQLNKVLAQGRVSGSGIALNMT 68

Query: 72  TFVEEFD--------------PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +                    P  P  + +       V++  E  +  + +  Y  +L  
Sbjct: 69  SARHIPAQNMQPPQLDLLFRVPDQPAMDGN------TVDMDRERTNFADNSLKYQTDLTL 122

Query: 118 IK-QSHDMMT 126
           I  Q   MM+
Sbjct: 123 INGQIKGMMS 132


>gi|254457547|ref|ZP_05070975.1| flagellar hook protein FlgE [Campylobacterales bacterium GD 1]
 gi|207086339|gb|EDZ63623.1| flagellar hook protein FlgE [Campylobacterales bacterium GD 1]
          Length = 705

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     SGL      M + S NIAN  TTG
Sbjct: 1  MLKSLFSGVSGLQSHQVAMDVESNNIANVNTTG 33



 Score = 33.7 bits (77), Expect = 8.7,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R + AN +TI  S  ++ T + L
Sbjct: 663 EASNVDLSRALTQLIIIQRGFQANGKTITTSDQLLQTLIGL 703


>gi|188534173|ref|YP_001907970.1| flagellar basal body rod protein FlgB [Erwinia tasmaniensis
          Et1/99]
 gi|188029215|emb|CAO97087.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
          Length = 137

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 9/44 (20%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L  Q    +I++ NIANA T G       Y+ + I F   +  +
Sbjct: 18 LRAQRQ--EILASNIANADTPG-------YQARDIDFASQLSKA 52


>gi|186895115|ref|YP_001872227.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           PB1/+]
 gi|186698141|gb|ACC88770.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           PB1/+]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I+   +   +   LL
Sbjct: 204 GVLEGSNVKAVEAMTDMIANARSFEMQMKVIQSVDENEQSANQLL 248


>gi|28869148|ref|NP_791767.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato str. DC3000]
 gi|213967575|ref|ZP_03395723.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato T1]
 gi|301385720|ref|ZP_07234138.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato Max13]
 gi|302060067|ref|ZP_07251608.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato K40]
 gi|302134826|ref|ZP_07260816.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato NCPPB 1108]
 gi|28852388|gb|AAO55462.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato str. DC3000]
 gi|213927876|gb|EEB61423.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato T1]
 gi|331017018|gb|EGH97074.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          lachrymans str. M302278PT]
          Length = 686

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G+ V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVMTTASAQINIGLGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|37525847|ref|NP_929191.1| flagellar hook-associated protein FlgK [Photorhabdus luminescens
          subsp. laumondii TTO1]
 gi|36785276|emb|CAE14217.1| Flagellar hook-associated protein 1 (HAP1) [Photorhabdus
          luminescens subsp. laumondii TTO1]
 gi|37681983|gb|AAQ97871.1| FlgK [Photorhabdus luminescens]
          Length = 549

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 7/73 (9%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +  +IA SGL      +  +S N+AN       PG   Y R++    +       V    
Sbjct: 4  SLINIAMSGLQAAQIALGTVSNNLAN----SKVPG---YNRQSTVVNQNGGTMTSVGFIG 56

Query: 66 IGVDQSTFVEEFD 78
           GV  ++   +++
Sbjct: 57 NGVTVTSINRQYN 69


>gi|16802724|ref|NP_464209.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           EGD-e]
 gi|224502013|ref|ZP_03670320.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           R2-561]
 gi|16410071|emb|CAC98760.1| lmo0682 [Listeria monocytogenes EGD-e]
          Length = 259

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 6/34 (17%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ +E   + +  R+  A+   + 
Sbjct: 210 QNGVIETSNVDLGIEMVQLMDNQRMVQASKNVVN 243


>gi|82544457|ref|YP_408404.1| flagellar basal body rod protein FlgF [Shigella boydii Sb227]
 gi|187731130|ref|YP_001880751.1| flagellar basal body rod protein FlgF [Shigella boydii CDC 3083-94]
 gi|81245868|gb|ABB66576.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
 gi|187428122|gb|ACD07396.1| flagellar basal-body rod protein FlgF [Shigella boydii CDC 3083-94]
 gi|320186976|gb|EFW61689.1| Flagellar basal-body rod protein FlgF [Shigella flexneri CDC
           796-83]
 gi|332094101|gb|EGI99153.1| flagellar basal-body rod protein FlgF [Shigella boydii 3594-74]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|323947621|gb|EGB43625.1| flagellar basal-body rod protein FlgF [Escherichia coli H120]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|308273187|emb|CBX29790.1| hypothetical protein N47_F14850 [uncultured Desulfobacterium sp.]
          Length = 135

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 27/137 (19%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
              +I  + + V   R   IS NI+N  T G       YR K I F+  M  + G    +
Sbjct: 9   NIFNILENAIGVAYQRQNTISSNISNLETPG-------YRPKDIDFKAAMAKAIGSE-SQ 60

Query: 66  IGVD--QSTFVEEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           I +    +  ++ ++  +  A       + +G V Y +++   +  +     R+   NL 
Sbjct: 61  ISLSGTNAGHIDLYNEANQEAEAFEEESDWNG-VNYVSID---KMVN-----RMTENNL- 110

Query: 117 TIKQSHDMMTTTLDLLR 133
             K + ++M   + L++
Sbjct: 111 IYKTAAEVMLRKISLIK 127


>gi|331682579|ref|ZP_08383198.1| flagellar basal-body rod protein FlgF [Escherichia coli H299]
 gi|331080210|gb|EGI51389.1| flagellar basal-body rod protein FlgF [Escherichia coli H299]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|300928371|ref|ZP_07143905.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 187-1]
 gi|300463629|gb|EFK27122.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 187-1]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|291220934|ref|XP_002730478.1| PREDICTED: DNA cross-link repair 1B (PSO2 homolog, S.
           cerevisiae)-like [Saccoglossus kowalevskii]
          Length = 939

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 8/67 (11%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET--- 101
           +R    F+ V      V+VK I  + ++F E +D G P + A G V     +++      
Sbjct: 492 QRHETQFDNVFSDDVKVKVKNIVENVNSFKENYDYGSPKSKAEGHV-----DIMNGMKHC 546

Query: 102 ADMRETN 108
             M  ++
Sbjct: 547 TCMISSS 553


>gi|289612565|emb|CBI60084.1| unnamed protein product [Sordaria macrospora]
          Length = 159

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 7/33 (21%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          M++IS N+AN  TTG       ++R   SFE +
Sbjct: 1  MRVISNNLANVNTTG-------FKRDRASFEAM 26


>gi|301023264|ref|ZP_07187061.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 69-1]
 gi|284920900|emb|CBG33963.1| flagellar basal-body rod protein FlgF [Escherichia coli 042]
 gi|300397109|gb|EFJ80647.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 69-1]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|218553655|ref|YP_002386568.1| flagellar basal body rod protein FlgF [Escherichia coli IAI1]
 gi|218360423|emb|CAQ97977.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI1]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|170020527|ref|YP_001725481.1| flagellar basal body rod protein FlgF [Escherichia coli ATCC 8739]
 gi|312971214|ref|ZP_07785392.1| flagellar basal-body rod protein FlgF [Escherichia coli 1827-70]
 gi|169755455|gb|ACA78154.1| flagellar basal-body rod protein FlgF [Escherichia coli ATCC 8739]
 gi|310336416|gb|EFQ01602.1| flagellar basal-body rod protein FlgF [Escherichia coli 1827-70]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|193069514|ref|ZP_03050468.1| flagellar basal-body rod protein FlgF [Escherichia coli E110019]
 gi|192957262|gb|EDV87711.1| flagellar basal-body rod protein FlgF [Escherichia coli E110019]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|157160604|ref|YP_001457922.1| flagellar basal body rod protein FlgF [Escherichia coli HS]
 gi|157066284|gb|ABV05539.1| flagellar basal-body rod protein FlgF [Escherichia coli HS]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|330967097|gb|EGH67357.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          actinidiae str. M302091]
          Length = 686

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G+ V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVMTTASAQINIGLGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|330721007|gb|EGG99168.1| Flagellar basal-body rod protein FlgF [gamma proteobacterium
           IMCC2047]
          Length = 246

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++G ++  NVN +    ++   +R +  +++ +K + +    +  LL+
Sbjct: 197 SAGFLEGSNVNSVEALTELISLSRQFELHVKMMKTAEENSEASARLLQ 244


>gi|324007917|gb|EGB77136.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 57-2]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|313610153|gb|EFR85462.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           F2-208]
          Length = 238

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ VE   + +  R+  A+   + 
Sbjct: 189 QNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVN 222


>gi|264676567|ref|YP_003276473.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          CNB-2]
 gi|299531289|ref|ZP_07044699.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          S44]
 gi|262207079|gb|ACY31177.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          CNB-2]
 gi|298720696|gb|EFI61643.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          S44]
          Length = 137

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 9/44 (20%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L  +  R   I+ NIANA T G       Y  +  +F E +  +
Sbjct: 18 LRAERQR--AIASNIANADTPG-------YVARDFNFREALMAA 52


>gi|242309658|ref|ZP_04808813.1| flagellar hook protein [Helicobacter pullorum MIT 98-5489]
 gi|239523659|gb|EEQ63525.1| flagellar hook protein [Helicobacter pullorum MIT 98-5489]
          Length = 750

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 13 SGLAVQSARMQIISENIANART 34
          SG+      + + S NIAN  T
Sbjct: 10 SGMQAHQVALDVESNNIANVNT 31


>gi|126730135|ref|ZP_01745947.1| flagellar basal body rod protein [Sagittula stellata E-37]
 gi|126709515|gb|EBA08569.1| flagellar basal body rod protein [Sagittula stellata E-37]
          Length = 237

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 4/33 (12%)

Query: 8  AHIANS-GLAVQS--AR-MQIISENIANARTTG 36
             A    L+ QS   R MQ+I+ NIANA TTG
Sbjct: 1  METAGYIALSRQSSLLREMQVIANNIANANTTG 33



 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYM 112
            G  +  NV+ +++ A M E  R Y 
Sbjct: 190 QGFTEASNVDTVLQLARMVEVQRAYE 215


>gi|157155680|ref|YP_001462311.1| flagellar basal body rod protein FlgF [Escherichia coli E24377A]
 gi|193064568|ref|ZP_03045648.1| flagellar basal-body rod protein FlgF [Escherichia coli E22]
 gi|256018666|ref|ZP_05432531.1| flagellar basal body rod protein FlgF [Shigella sp. D9]
 gi|260843317|ref|YP_003221095.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|260854560|ref|YP_003228451.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|260867440|ref|YP_003233842.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|293433367|ref|ZP_06661795.1| flagellar basal-body rod protein FlgF [Escherichia coli B088]
 gi|300816779|ref|ZP_07096999.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 107-1]
 gi|300922603|ref|ZP_07138703.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 182-1]
 gi|301328553|ref|ZP_07221614.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 78-1]
 gi|332279735|ref|ZP_08392148.1| flagellar basal-body rod protein FlgF [Shigella sp. D9]
 gi|157077710|gb|ABV17418.1| flagellar basal-body rod protein FlgF [Escherichia coli E24377A]
 gi|192927820|gb|EDV82434.1| flagellar basal-body rod protein FlgF [Escherichia coli E22]
 gi|257753209|dbj|BAI24711.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|257758464|dbj|BAI29961.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|257763796|dbj|BAI35291.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|291324186|gb|EFE63608.1| flagellar basal-body rod protein FlgF [Escherichia coli B088]
 gi|300421080|gb|EFK04391.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 182-1]
 gi|300530553|gb|EFK51615.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 107-1]
 gi|300844945|gb|EFK72705.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 78-1]
 gi|323156884|gb|EFZ43018.1| flagellar basal-body rod protein FlgF [Escherichia coli EPECa14]
 gi|323175692|gb|EFZ61286.1| flagellar basal-body rod protein FlgF [Escherichia coli 1180]
 gi|323185800|gb|EFZ71161.1| flagellar basal-body rod protein FlgF [Escherichia coli 1357]
 gi|324117352|gb|EGC11259.1| flagellar basal-body rod protein FlgF [Escherichia coli E1167]
 gi|332102087|gb|EGJ05433.1| flagellar basal-body rod protein FlgF [Shigella sp. D9]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|16129040|ref|NP_415595.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|89107923|ref|AP_001703.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. W3110]
 gi|110805094|ref|YP_688614.1| flagellar basal body rod protein FlgF [Shigella flexneri 5 str.
           8401]
 gi|170080728|ref|YP_001730048.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|188495735|ref|ZP_03003005.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
 gi|194438118|ref|ZP_03070211.1| flagellar basal-body rod protein FlgF [Escherichia coli 101-1]
 gi|209918331|ref|YP_002292415.1| flagellar basal body rod protein FlgF [Escherichia coli SE11]
 gi|218694611|ref|YP_002402278.1| flagellar basal body rod protein FlgF [Escherichia coli 55989]
 gi|238900331|ref|YP_002926127.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|253773899|ref|YP_003036730.1| flagellar basal body rod protein FlgF [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161183|ref|YP_003044291.1| flagellar basal body rod protein FlgF [Escherichia coli B str.
           REL606]
 gi|256023225|ref|ZP_05437090.1| flagellar basal body rod protein FlgF [Escherichia sp. 4_1_40B]
 gi|297517865|ref|ZP_06936251.1| flagellar basal body rod protein FlgF [Escherichia coli OP50]
 gi|300821142|ref|ZP_07101291.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 119-7]
 gi|300902468|ref|ZP_07120450.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 84-1]
 gi|300950172|ref|ZP_07164117.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 116-1]
 gi|301029708|ref|ZP_07192762.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 196-1]
 gi|301304984|ref|ZP_07211086.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 124-1]
 gi|301644989|ref|ZP_07244955.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 146-1]
 gi|307137712|ref|ZP_07497068.1| flagellar basal body rod protein FlgF [Escherichia coli H736]
 gi|331641621|ref|ZP_08342756.1| flagellar basal-body rod protein FlgF [Escherichia coli H736]
 gi|331667477|ref|ZP_08368341.1| flagellar basal-body rod protein FlgF [Escherichia coli TA271]
 gi|331676868|ref|ZP_08377564.1| flagellar basal-body rod protein FlgF [Escherichia coli H591]
 gi|2494531|sp|P75938|FLGF_ECOLI RecName: Full=Flagellar basal-body rod protein flgF; AltName:
           Full=Putative proximal rod protein
 gi|1787317|gb|AAC74161.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062655|dbj|BAA35886.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K12 substr. W3110]
 gi|110614642|gb|ABF03309.1| flagellar basal-body rod protein FlgF [Shigella flexneri 5 str.
           8401]
 gi|169888563|gb|ACB02270.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|188490934|gb|EDU66037.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
 gi|194423054|gb|EDX39048.1| flagellar basal-body rod protein FlgF [Escherichia coli 101-1]
 gi|209911590|dbj|BAG76664.1| flagellar basal-body rod protein FlgF [Escherichia coli SE11]
 gi|218351343|emb|CAU97049.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli 55989]
 gi|238861103|gb|ACR63101.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|242376881|emb|CAQ31598.1| flagellar basal-body rod protein FlgF, subunit of Flagellar Motor
           Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324943|gb|ACT29545.1| flagellar basal-body rod protein FlgF [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973084|gb|ACT38755.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli B str. REL606]
 gi|253977298|gb|ACT42968.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BL21(DE3)]
 gi|260449783|gb|ACX40205.1| flagellar basal-body rod protein FlgF [Escherichia coli DH1]
 gi|299877396|gb|EFI85607.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 196-1]
 gi|300405500|gb|EFJ89038.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 84-1]
 gi|300450519|gb|EFK14139.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 116-1]
 gi|300526441|gb|EFK47510.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 119-7]
 gi|300839702|gb|EFK67462.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 124-1]
 gi|301076718|gb|EFK91524.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 146-1]
 gi|309701349|emb|CBJ00650.1| flagellar basal-body rod protein FlgF [Escherichia coli ETEC
           H10407]
 gi|315135709|dbj|BAJ42868.1| flagellar basal body rod protein FlgF [Escherichia coli DH1]
 gi|315253878|gb|EFU33846.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 85-1]
 gi|323937817|gb|EGB34081.1| flagellar basal-body rod protein FlgF [Escherichia coli E1520]
 gi|323942546|gb|EGB38713.1| flagellar basal-body rod protein FlgF [Escherichia coli E482]
 gi|323962676|gb|EGB58254.1| flagellar basal-body rod protein FlgF [Escherichia coli H489]
 gi|323973334|gb|EGB68523.1| flagellar basal-body rod protein FlgF [Escherichia coli TA007]
 gi|324017419|gb|EGB86638.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 117-3]
 gi|331038419|gb|EGI10639.1| flagellar basal-body rod protein FlgF [Escherichia coli H736]
 gi|331065062|gb|EGI36957.1| flagellar basal-body rod protein FlgF [Escherichia coli TA271]
 gi|331075557|gb|EGI46855.1| flagellar basal-body rod protein FlgF [Escherichia coli H591]
 gi|332342623|gb|AEE55957.1| flagellar basal-body rod protein FlgF [Escherichia coli UMNK88]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|331652130|ref|ZP_08353149.1| flagellar basal-body rod protein FlgF [Escherichia coli M718]
 gi|331050408|gb|EGI22466.1| flagellar basal-body rod protein FlgF [Escherichia coli M718]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|300716219|ref|YP_003741022.1| flagellar basal-body rod protein [Erwinia billingiae Eb661]
 gi|299062055|emb|CAX59171.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKPVETMVDMIANARRFEMQMKVISSVDENEQRANQLL 248


>gi|221069325|ref|ZP_03545430.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          KF-1]
 gi|220714348|gb|EED69716.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          KF-1]
          Length = 137

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 9/44 (20%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L  +  R   I+ NIANA T G       Y  +  +F E +  +
Sbjct: 18 LRAERQR--AIASNIANADTPG-------YVARDFNFREALMAA 52


>gi|71733906|ref|YP_275555.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          phaseolicola 1448A]
 gi|298487849|ref|ZP_07005889.1| Flagellar hook-associated protein flgK [Pseudomonas savastanoi
          pv. savastanoi NCPPB 3335]
 gi|71554459|gb|AAZ33670.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          phaseolicola 1448A]
 gi|298157574|gb|EFH98654.1| Flagellar hook-associated protein flgK [Pseudomonas savastanoi
          pv. savastanoi NCPPB 3335]
 gi|320325100|gb|EFW81169.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          glycinea str. B076]
          Length = 686

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G+ V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVMTTASAQINIGLGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|320329359|gb|EFW85352.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          glycinea str. race 4]
          Length = 686

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G+ V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVMTTASAQINIGLGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|170703622|ref|ZP_02894363.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           IOP40-10]
 gi|170131468|gb|EDT00055.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           IOP40-10]
          Length = 665

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 663


>gi|83593864|ref|YP_427616.1| hypothetical protein Rru_A2529 [Rhodospirillum rubrum ATCC 11170]
 gi|83576778|gb|ABC23329.1| Protein of unknown function DUF1078 [Rhodospirillum rubrum ATCC
           11170]
          Length = 452

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VNV  ETA M    + +    Q I  + +M  T + +++
Sbjct: 414 VNVEEETAKMLVFQQSFQMTSQVITTAREMFNTLMSMMK 452


>gi|229017058|ref|ZP_04173977.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1273]
 gi|229023239|ref|ZP_04179749.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1272]
 gi|228738033|gb|EEL88519.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1272]
 gi|228744231|gb|EEL94314.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1273]
          Length = 267

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
           P    A  + +++  NV++  E AD+  + ++  A+ + +     +      ++L+
Sbjct: 212 PNGTGAVKNHMLENSNVDMTKEMADLMTSQKMIQASQRVMTSFDKIYEKEANEILK 267


>gi|217965220|ref|YP_002350898.1| flagellar basal body rod protein [Listeria monocytogenes HCC23]
 gi|290893977|ref|ZP_06556952.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J2-071]
 gi|217334490|gb|ACK40284.1| flagellar basal body rod protein [Listeria monocytogenes HCC23]
 gi|290556423|gb|EFD89962.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J2-071]
 gi|307570221|emb|CAR83400.1| flagellar basal-body rod protein, putative [Listeria monocytogenes
           L99]
          Length = 259

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ VE   + +  R+  A+   + 
Sbjct: 210 QNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVN 243


>gi|168783607|ref|ZP_02808614.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4076]
 gi|188999091|gb|EDU68077.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4076]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +    DM  T R +   ++ I   +D       LL
Sbjct: 203 SGVLEGSNVNAVAAMTDMIATARRFEMQMKVITTVNDNPGRANQLL 248


>gi|300918679|ref|ZP_07135260.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 115-1]
 gi|300414173|gb|EFJ97483.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 115-1]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|224498764|ref|ZP_03667113.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           Finland 1988]
          Length = 259

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ VE   + +  R+  A+   + 
Sbjct: 210 QNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVN 243


>gi|215486286|ref|YP_002328717.1| flagellar basal body rod protein FlgF [Escherichia coli O127:H6
           str. E2348/69]
 gi|306814074|ref|ZP_07448247.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
 gi|312968849|ref|ZP_07783056.1| flagellar basal-body rod protein FlgF [Escherichia coli 2362-75]
 gi|331657139|ref|ZP_08358101.1| flagellar basal-body rod protein FlgF [Escherichia coli TA206]
 gi|215264358|emb|CAS08715.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O127:H6 str. E2348/69]
 gi|305852711|gb|EFM53159.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
 gi|312286251|gb|EFR14164.1| flagellar basal-body rod protein FlgF [Escherichia coli 2362-75]
 gi|331055387|gb|EGI27396.1| flagellar basal-body rod protein FlgF [Escherichia coli TA206]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|170680164|ref|YP_001744103.1| flagellar basal body rod protein FlgF [Escherichia coli SMS-3-5]
 gi|218704485|ref|YP_002412004.1| flagellar basal body rod protein FlgF [Escherichia coli UMN026]
 gi|293404361|ref|ZP_06648355.1| flgF [Escherichia coli FVEC1412]
 gi|298380141|ref|ZP_06989746.1| flagellar basal-body rod protein flgF [Escherichia coli FVEC1302]
 gi|300899596|ref|ZP_07117835.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 198-1]
 gi|307310145|ref|ZP_07589795.1| flagellar basal-body rod protein FlgF [Escherichia coli W]
 gi|331662483|ref|ZP_08363406.1| flagellar basal-body rod protein FlgF [Escherichia coli TA143]
 gi|170517882|gb|ACB16060.1| flagellar basal-body rod protein FlgF [Escherichia coli SMS-3-5]
 gi|218431582|emb|CAR12461.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli UMN026]
 gi|291428947|gb|EFF01972.1| flgF [Escherichia coli FVEC1412]
 gi|298279839|gb|EFI21347.1| flagellar basal-body rod protein flgF [Escherichia coli FVEC1302]
 gi|300356867|gb|EFJ72737.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 198-1]
 gi|306909863|gb|EFN40357.1| flagellar basal-body rod protein FlgF [Escherichia coli W]
 gi|315060355|gb|ADT74682.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli W]
 gi|320200973|gb|EFW75557.1| Flagellar basal-body rod protein FlgF [Escherichia coli EC4100B]
 gi|323379084|gb|ADX51352.1| flagellar basal-body rod protein FlgF [Escherichia coli KO11]
 gi|331060905|gb|EGI32869.1| flagellar basal-body rod protein FlgF [Escherichia coli TA143]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|74311639|ref|YP_310058.1| flagellar basal body rod protein FlgF [Shigella sonnei Ss046]
 gi|73855116|gb|AAZ87823.1| flagellar protein for cell-proximal portion of basal-body rod
           [Shigella sonnei Ss046]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|331672597|ref|ZP_08373386.1| flagellar basal-body rod protein FlgF [Escherichia coli TA280]
 gi|331070240|gb|EGI41606.1| flagellar basal-body rod protein FlgF [Escherichia coli TA280]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|331646335|ref|ZP_08347438.1| flagellar basal-body rod protein FlgF [Escherichia coli M605]
 gi|222032830|emb|CAP75569.1| flagellar basal-body rod protein flgF [Escherichia coli LF82]
 gi|281178186|dbj|BAI54516.1| flagellar basal-body rod protein FlgF [Escherichia coli SE15]
 gi|312945639|gb|ADR26466.1| flagellar basal body rod protein FlgF [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|330910891|gb|EGH39401.1| flagellar basal-body rod protein FlgF [Escherichia coli AA86]
 gi|331045087|gb|EGI17214.1| flagellar basal-body rod protein FlgF [Escherichia coli M605]
          Length = 251

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|222112279|ref|YP_002554543.1| flagellar hook-associated protein flgk [Acidovorax ebreus TPSY]
 gi|221731723|gb|ACM34543.1| flagellar hook-associated protein FlgK [Acidovorax ebreus TPSY]
          Length = 672

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 14/79 (17%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++  ++    L      +Q    NIAN  T G       Y R+ ++ E V          
Sbjct: 1  MSLLNVGARALLANQVALQTTGHNIANVSTAG-------YSRQNVAMETVQGQFTGSGYI 53

Query: 58 SGGVRVKKIGVDQSTFVEE 76
            GV+V  I  + +  +  
Sbjct: 54 GNGVQVATILRNHNELLTR 72


>gi|94312670|ref|YP_585879.1| flagellar basal body proximal rod protein [Cupriavidus
           metallidurans CH34]
 gi|93356522|gb|ABF10610.1| flagellar basal body proximal rod protein [Cupriavidus
           metallidurans CH34]
          Length = 247

 Score = 36.1 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           SG ++  NVN +    +M    R +   ++ I  +         LL +
Sbjct: 199 SGALEGSNVNPVESMVEMIANARRFEMQMKMITGADSNDQRANALLSN 246


>gi|315618247|gb|EFU98837.1| flagellar basal-body rod protein FlgF [Escherichia coli 3431]
          Length = 251

 Score = 35.7 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|242278629|ref|YP_002990758.1| flagellar basal body rod protein FlgB [Desulfovibrio salexigens
          DSM 2638]
 gi|242121523|gb|ACS79219.1| flagellar basal-body rod protein FlgB [Desulfovibrio salexigens
          DSM 2638]
          Length = 136

 Score = 35.7 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 9/44 (20%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L +Q     ++S N+AN  T G       Y+ K + FEE +  +
Sbjct: 18 LRLQRQ--NLVSSNLANVNTPG-------YKEKRLEFEEDLQKA 52


>gi|171059415|ref|YP_001791764.1| flagellar basal-body rod protein FlgB [Leptothrix cholodnii SP-6]
 gi|170776860|gb|ACB34999.1| flagellar basal-body rod protein FlgB [Leptothrix cholodnii SP-6]
          Length = 134

 Score = 35.7 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 9/46 (19%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          L  +  R+  I+ NIANA T G       Y  + + F   +  + G
Sbjct: 18 LRSERQRL--IASNIANAETPG-------YVARDLDFASALKQAVG 54


>gi|172061965|ref|YP_001809617.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           MC40-6]
 gi|171994482|gb|ACB65401.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           MC40-6]
          Length = 665

 Score = 35.7 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 663


>gi|22127321|ref|NP_670744.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM 10]
 gi|45442802|ref|NP_994341.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Microtus str. 91001]
 gi|108809049|ref|YP_652965.1| flagellar hook-associated protein FlgK [Yersinia pestis Antiqua]
 gi|108810754|ref|YP_646521.1| flagellar hook-associated protein FlgK [Yersinia pestis Nepal516]
 gi|145597823|ref|YP_001161899.1| flagellar hook-associated protein FlgK [Yersinia pestis Pestoides
          F]
 gi|150260243|ref|ZP_01916971.1| lateral flagellar hook-associated protein 1 [Yersinia pestis
          CA88-4125]
 gi|162420194|ref|YP_001604841.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola]
 gi|165925087|ref|ZP_02220919.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. F1991016]
 gi|165939060|ref|ZP_02227612.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. IP275]
 gi|166008985|ref|ZP_02229883.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. E1979001]
 gi|166212172|ref|ZP_02238207.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. B42003004]
 gi|167399689|ref|ZP_02305213.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. UG05-0454]
 gi|167419324|ref|ZP_02311077.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|167425178|ref|ZP_02316931.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|167466331|ref|ZP_02331035.1| flagellar hook-associated protein FlgK [Yersinia pestis FV-1]
 gi|218927918|ref|YP_002345793.1| flagellar hook-associated protein FlgK [Yersinia pestis CO92]
 gi|229837414|ref|ZP_04457577.1| Flagellar hook-associated protein flgK [Yersinia pestis Pestoides
          A]
 gi|229840629|ref|ZP_04460788.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
          Orientalis str. PEXU2]
 gi|229842820|ref|ZP_04462972.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
          Orientalis str. India 195]
 gi|229900951|ref|ZP_04516075.1| Flagellar hook-associated protein flgK [Yersinia pestis Nepal516]
 gi|270487666|ref|ZP_06204740.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27]
 gi|294502794|ref|YP_003566856.1| flagellar hook-associated protein [Yersinia pestis Z176003]
 gi|21960402|gb|AAM86995.1|AE013948_3 putative flagellar hook-associated protein [Yersinia pestis KIM
          10]
 gi|45437668|gb|AAS63218.1| putative flagellar hook-associated protein [Yersinia pestis
          biovar Microtus str. 91001]
 gi|108774402|gb|ABG16921.1| flagellar hook-associated protein [Yersinia pestis Nepal516]
 gi|108780962|gb|ABG15020.1| putative flagellar hook-associated protein [Yersinia pestis
          Antiqua]
 gi|115346529|emb|CAL19406.1| putative flagellar hook-associated protein [Yersinia pestis CO92]
 gi|145209519|gb|ABP38926.1| flagellar hook-associated protein [Yersinia pestis Pestoides F]
 gi|149289651|gb|EDM39728.1| lateral flagellar hook-associated protein 1 [Yersinia pestis
          CA88-4125]
 gi|162353009|gb|ABX86957.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola]
 gi|165913016|gb|EDR31641.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. IP275]
 gi|165923287|gb|EDR40438.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. F1991016]
 gi|165992324|gb|EDR44625.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. E1979001]
 gi|166206918|gb|EDR51398.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. B42003004]
 gi|166963318|gb|EDR59339.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|167052193|gb|EDR63601.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. UG05-0454]
 gi|167055941|gb|EDR65722.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|229682290|gb|EEO78382.1| Flagellar hook-associated protein flgK [Yersinia pestis Nepal516]
 gi|229690087|gb|EEO82144.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
          Orientalis str. India 195]
 gi|229696995|gb|EEO87042.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
          Orientalis str. PEXU2]
 gi|229705537|gb|EEO91547.1| Flagellar hook-associated protein flgK [Yersinia pestis Pestoides
          A]
 gi|262360826|gb|ACY57547.1| flagellar hook-associated protein [Yersinia pestis D106004]
 gi|262364771|gb|ACY61328.1| flagellar hook-associated protein [Yersinia pestis D182038]
 gi|270336170|gb|EFA46947.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27]
 gi|294353253|gb|ADE63594.1| flagellar hook-associated protein [Yersinia pestis Z176003]
 gi|320016705|gb|ADW00277.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
          Medievalis str. Harbin 35]
          Length = 453

 Score = 35.7 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 12/62 (19%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSG 59
          M+++  +     SG+    A +   S NIAN  T G       Y R+      +   G G
Sbjct: 1  MNFIRTAF----SGMQATQAHLNATSMNIANMHTPG-------YSRQRAEQSAIGADGQG 49

Query: 60 GV 61
          GV
Sbjct: 50 GV 51



 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E  ++ E  R Y +N++ I     + +  L L
Sbjct: 414 SGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLAL 452


>gi|110641253|ref|YP_668983.1| flagellar basal body rod protein FlgF [Escherichia coli 536]
 gi|191172387|ref|ZP_03033928.1| flagellar basal-body rod protein FlgF [Escherichia coli F11]
 gi|300982620|ref|ZP_07176204.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 200-1]
 gi|110342845|gb|ABG69082.1| flagellar basal-body rod protein FlgF [Escherichia coli 536]
 gi|190907271|gb|EDV66869.1| flagellar basal-body rod protein FlgF [Escherichia coli F11]
 gi|300307085|gb|EFJ61605.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 200-1]
 gi|324013351|gb|EGB82570.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 60-1]
          Length = 251

 Score = 35.7 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|115353111|ref|YP_774950.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           AMMD]
 gi|115283099|gb|ABI88616.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           AMMD]
          Length = 665

 Score = 35.7 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 663


>gi|323976550|gb|EGB71638.1| flagellar basal-body rod protein FlgF [Escherichia coli TW10509]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|259908815|ref|YP_002649171.1| flagellar basal body rod protein FlgB [Erwinia pyrifoliae Ep1/96]
 gi|224964437|emb|CAX55946.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
 gi|283478797|emb|CAY74713.1| Flagellar basal-body rod protein flgB [Erwinia pyrifoliae DSM
           12163]
 gi|310767287|gb|ADP12237.1| flagellar basal body rod protein FlgB [Erwinia sp. Ejp617]
          Length = 137

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 46/132 (34%), Gaps = 33/132 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---------HGSG-GVRVK 64
           L  Q    +I++ NIANA T G       Y+ + I F   +          GSG  + V 
Sbjct: 18  LRAQRQ--EILASNIANADTPG-------YQARDIDFASQLTKAVEHGRAQGSGMSLTVT 68

Query: 65  KIGVDQSTFV------EEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                 +           +  P  P ++ +       V++  E  +  + +  Y  +L  
Sbjct: 69  SARHIPAETQQPPSMDLMYRIPDQPASDGN------TVDMDRERTEFADNSLKYQTDLTL 122

Query: 118 I-KQSHDMMTTT 128
           I  Q   MM+  
Sbjct: 123 ISSQIKGMMSAL 134


>gi|195940721|ref|ZP_03086103.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. EC4024]
          Length = 186

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM  + R +   ++ I    +  +    LL
Sbjct: 138 SGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDENASKANQLL 183


>gi|154686034|ref|YP_001421195.1| flagellar basal body rod protein FlgB [Bacillus amyloliquefaciens
           FZB42]
 gi|154351885|gb|ABS73964.1| FlgB [Bacillus amyloliquefaciens FZB42]
          Length = 129

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 32/110 (29%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG----VRVKKIGVD---------- 69
           +++ NIAN  T         Y+ K +SF  ++         V+     VD          
Sbjct: 24  VLTNNIANIDTPN-------YKAKKVSFRNLLDQETSNLEAVKTDYRHVDFTGSGDDYSI 76

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            S+    +         +G     NV++  E  D+ E    Y A ++ + 
Sbjct: 77  VSSSDTSYQQ-------NGN----NVDIDKEMTDLAENQINYQALVERMS 115


>gi|330889076|gb|EGH21737.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          mori str. 301020]
          Length = 546

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +        + G+ V 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVMTTASAQINIGLGVG 53

Query: 65 KIGVDQ--STFVEEFD 78
           IG     S     ++
Sbjct: 54 YIGTGTTLSDVRRIYN 69


>gi|315281336|ref|ZP_07869982.1| flagellar basal body rod protein FlgG [Listeria marthii FSL S4-120]
 gi|313615012|gb|EFR88510.1| flagellar basal body rod protein FlgG [Listeria marthii FSL S4-120]
          Length = 152

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ VE   + +  R+  A+   + 
Sbjct: 103 QNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVN 136


>gi|302878277|ref|YP_003846841.1| flagellar basal-body rod protein FlgF [Gallionella
           capsiferriformans ES-2]
 gi|302581066|gb|ADL55077.1| flagellar basal-body rod protein FlgF [Gallionella
           capsiferriformans ES-2]
          Length = 247

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 48/146 (32%), Gaps = 26/146 (17%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDT--PGSDPYRRKTISFEEVMHGSGGVRVK 64
           S  I++SG+      + ++S       +   T  PG+     K  +   V  G+    V 
Sbjct: 104 SFQISSSGVLQTRNGLNVLS------DSGPITIPPGTQLTFAKDGTISTVPEGNQATSVV 157

Query: 65  KIGV------DQSTFVEEFD-----PGHPVANAS-------GIVKYPNVNVLVETADMRE 106
            +G       D +      D          A A        G ++  NV+ +    +M  
Sbjct: 158 VVGRLKLVNPDVAKLERSGDGMFRMKDGSTAPADAKTEIAPGNLEGSNVSTVEMMVNMIS 217

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLL 132
             R +   ++ ++ + +       ++
Sbjct: 218 LARKFDMQMKMLQTADNNAKQASSIM 243


>gi|46906933|ref|YP_013322.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|46880199|gb|AAT03499.1| putative flagellar basal-body rod protein [Listeria monocytogenes
           serotype 4b str. F2365]
          Length = 259

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ VE   + +  R+  A+   + 
Sbjct: 210 QNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVN 243


>gi|323174794|gb|EFZ60409.1| flagellar basal-body rod protein FlgF [Escherichia coli LT-68]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|315296708|gb|EFU56003.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 16-3]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|291334320|gb|ADD93981.1| flagellar hook associated protein 1 [uncultured marine bacterium
          MedDCM-OCT-S09-C247]
          Length = 354

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 25/75 (33%), Gaps = 17/75 (22%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
          +     IA SGL      +    +NIAN        G+  Y R+     EV   +     
Sbjct: 1  MSDIYGIAKSGLQAYKEGLATTGQNIANV-------GNKDYARREAPVSEVKSSNDVLQV 53

Query: 60 ------GVRVKKIGV 68
                GVRV  I  
Sbjct: 54 SNTAGFGVRVDGITR 68


>gi|261420582|ref|YP_003254264.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC61]
 gi|319768252|ref|YP_004133753.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC52]
 gi|261377039|gb|ACX79782.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC61]
 gi|317113118|gb|ADU95610.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC52]
          Length = 531

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 7/55 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M         A  G+  Q A +   S NIANA T G       Y R+ +  +   
Sbjct: 1  MLSTFHGLEAARRGMMAQQAALYTTSHNIANANTEG-------YTRQRVQLQPTP 48


>gi|26247217|ref|NP_753257.1| flagellar basal body rod protein FlgF [Escherichia coli CFT073]
 gi|91210229|ref|YP_540215.1| flagellar basal body rod protein FlgF [Escherichia coli UTI89]
 gi|117623263|ref|YP_852176.1| flagellar basal body rod protein FlgF [Escherichia coli APEC O1]
 gi|227886565|ref|ZP_04004370.1| flagellar basal body rod protein FlgF [Escherichia coli 83972]
 gi|237706937|ref|ZP_04537418.1| flagellar basal-body rod protein flgF [Escherichia sp. 3_2_53FAA]
 gi|300974381|ref|ZP_07172593.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 45-1]
 gi|301051139|ref|ZP_07197969.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 185-1]
 gi|26107618|gb|AAN79817.1|AE016759_91 Flagellar basal-body rod protein flgF [Escherichia coli CFT073]
 gi|91071803|gb|ABE06684.1| flagellar basal-body rod protein FlgF [Escherichia coli UTI89]
 gi|115512387|gb|ABJ00462.1| flagellar basal-body rod protein FlgF [Escherichia coli APEC O1]
 gi|226898147|gb|EEH84406.1| flagellar basal-body rod protein flgF [Escherichia sp. 3_2_53FAA]
 gi|227836769|gb|EEJ47235.1| flagellar basal body rod protein FlgF [Escherichia coli 83972]
 gi|294491134|gb|ADE89890.1| flagellar basal-body rod protein FlgF [Escherichia coli IHE3034]
 gi|300297160|gb|EFJ53545.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 185-1]
 gi|300410624|gb|EFJ94162.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 45-1]
 gi|307553079|gb|ADN45854.1| flagellar basal-body rod protein FlgF [Escherichia coli ABU 83972]
 gi|307627453|gb|ADN71757.1| flagellar basal body rod protein FlgF [Escherichia coli UM146]
 gi|315287368|gb|EFU46779.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 110-3]
 gi|315291071|gb|EFU50434.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 153-1]
 gi|320196441|gb|EFW71064.1| Flagellar basal-body rod protein FlgF [Escherichia coli WV_060327]
 gi|323953237|gb|EGB49103.1| flagellar basal-body rod protein FlgF [Escherichia coli H252]
 gi|323957901|gb|EGB53613.1| flagellar basal-body rod protein FlgF [Escherichia coli H263]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|47091645|ref|ZP_00229441.1| flagellar basal-body rod protein, putative [Listeria monocytogenes
           str. 4b H7858]
 gi|254824038|ref|ZP_05229039.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J1-194]
 gi|254932038|ref|ZP_05265397.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           HPB2262]
 gi|47019964|gb|EAL10701.1| flagellar basal-body rod protein, putative [Listeria monocytogenes
           str. 4b H7858]
 gi|293583591|gb|EFF95623.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           HPB2262]
 gi|293593267|gb|EFG01028.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J1-194]
 gi|328467251|gb|EGF38331.1| flagellar basal body rod protein FlgG [Listeria monocytogenes 1816]
 gi|328475645|gb|EGF46394.1| flagellar basal body rod protein FlgG [Listeria monocytogenes 220]
 gi|332311107|gb|EGJ24202.1| Flagellar basal body rod protein [Listeria monocytogenes str. Scott
           A]
          Length = 259

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ VE   + +  R+  A+   + 
Sbjct: 210 QNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVN 243


>gi|312109475|ref|YP_003987791.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y4.1MC1]
 gi|311214576|gb|ADP73180.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y4.1MC1]
          Length = 534

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 7/51 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
          M        +A  G+  Q A + + + NIANA T G       Y R+ ++F
Sbjct: 1  MLSTFHGLEVAKRGMFTQQAALYVTAHNIANANTPG-------YSRQRVNF 44


>gi|221215578|ref|ZP_03588541.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           CGD1]
 gi|221164566|gb|EED97049.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           CGD1]
          Length = 698

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 658 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 696


>gi|118581855|ref|YP_903105.1| flagellar hook-associated protein FlgK [Pelobacter propionicus DSM
           2379]
 gi|118504565|gb|ABL01048.1| flagellar hook-associated protein FlgK [Pelobacter propionicus DSM
           2379]
          Length = 456

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 12/76 (15%)

Query: 63  VKKIG--VDQSTFVEEFD-----PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           V +IG  VDQ+  V E D       + + ++        V++  E  ++    R Y A+ 
Sbjct: 385 VSQIGLDVDQAETVVEQDEAYLKQLNTLRDSK-----SGVSLDEELTNLVMYQRSYQASA 439

Query: 116 QTIKQSHDMMTTTLDL 131
           + I    +MM T L +
Sbjct: 440 KLITTVTEMMDTLLAM 455


>gi|331017025|gb|EGH97081.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 586

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           G ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 542 GALEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   + 
Sbjct: 2  SFNTAISGINAANKRLEVAGNNIANSGTIG-------FKSSRAQFSALYSSAQ 47


>gi|330875984|gb|EGH10133.1| flagellar hook protein FlgE [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 586

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           G ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 542 GALEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   + 
Sbjct: 2  SFNTAISGINAANKRLEVAGNNIANSGTIG-------FKSSRAQFSALYSSAQ 47


>gi|226223313|ref|YP_002757420.1| flagellar hook-basal body protein FlgG [Listeria monocytogenes
           Clip81459]
 gi|225875775|emb|CAS04478.1| Putative flagellar hook-basal body protein FlgG [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
          Length = 259

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ VE   + +  R+  A+   + 
Sbjct: 210 QNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVN 243


>gi|183222558|ref|YP_001840554.1| flagellar hook-associated protein FlgK [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189912593|ref|YP_001964148.1| flagellar hook-associated protein FlgK [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167777269|gb|ABZ95570.1| Endoflagellar hook junction protein [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167780980|gb|ABZ99278.1| Flagellar hook-associated protein 1 (HAP1) [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 637

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 35/75 (46%), Gaps = 12/75 (16%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPN-------VNVLVETADMRETNRLYMANL 115
           + ++G +     +E+   + +     +V+  N       VN+  E A+M +  + Y A+ 
Sbjct: 564 ISRLGTEAREAKQEYTTQNEL-----MVELENMRQSVMGVNLDEEMANMVQFQQSYNASA 618

Query: 116 QTIKQSHDMMTTTLD 130
           + I   ++M+ T ++
Sbjct: 619 RMISTLNEMLDTIIN 633


>gi|167585195|ref|ZP_02377583.1| flagellar basal-body rod protein FlgF [Burkholderia ubonensis Bu]
          Length = 252

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)

Query: 80  GHPVANASGIV-------KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+P A+A   V       +  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 191 GNP-ADADPNVVVVPNSLEGSNVNPVNAMVAMIDNARAFQLQSKMIQTADQNEQSANQLL 249


>gi|47095247|ref|ZP_00232858.1| flagellar basal-body rod protein, putative [Listeria monocytogenes
           str. 1/2a F6854]
 gi|254829339|ref|ZP_05234026.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           N3-165]
 gi|254830327|ref|ZP_05234982.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           10403S]
 gi|254900082|ref|ZP_05260006.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           J0161]
 gi|254911365|ref|ZP_05261377.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254935692|ref|ZP_05267389.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           F6900]
 gi|255026599|ref|ZP_05298585.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J2-003]
 gi|284801012|ref|YP_003412877.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           08-5578]
 gi|284994154|ref|YP_003415922.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           08-5923]
 gi|47016318|gb|EAL07240.1| flagellar basal-body rod protein, putative [Listeria monocytogenes
           str. 1/2a F6854]
 gi|258601751|gb|EEW15076.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           N3-165]
 gi|258608274|gb|EEW20882.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           F6900]
 gi|284056574|gb|ADB67515.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           08-5578]
 gi|284059621|gb|ADB70560.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           08-5923]
 gi|293589301|gb|EFF97635.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 259

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ VE   + +  R+  A+   + 
Sbjct: 210 QNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVN 243


>gi|320179223|gb|EFW54181.1| Flagellar basal-body rod protein FlgF [Shigella boydii ATCC 9905]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|218689030|ref|YP_002397242.1| flagellar basal body rod protein FlgF [Escherichia coli ED1a]
 gi|218426594|emb|CAR07422.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli ED1a]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|218700420|ref|YP_002408049.1| flagellar basal body rod protein FlgF [Escherichia coli IAI39]
 gi|300938642|ref|ZP_07153371.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 21-1]
 gi|218370406|emb|CAR18213.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI39]
 gi|300456427|gb|EFK19920.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 21-1]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|171322357|ref|ZP_02911181.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           MEX-5]
 gi|171092319|gb|EDT37688.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           MEX-5]
          Length = 665

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 663


>gi|123442783|ref|YP_001006760.1| flagellar basal body rod protein FlgF [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122089744|emb|CAL12597.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +   ADM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKAVEAMADMIANARSFEMQMKVIHSVDENEQRANQLL 248


>gi|191168482|ref|ZP_03030270.1| flagellar basal-body rod protein FlgF [Escherichia coli B7A]
 gi|190901501|gb|EDV61262.1| flagellar basal-body rod protein FlgF [Escherichia coli B7A]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 204 GVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|304397201|ref|ZP_07379080.1| flagellar basal-body rod protein FlgB [Pantoea sp. aB]
 gi|304355350|gb|EFM19718.1| flagellar basal-body rod protein FlgB [Pantoea sp. aB]
          Length = 137

 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----------GSGGVRVK 64
           L  Q    +I++ NIANA T G       Y+ + I F   +            S  ++V 
Sbjct: 18  LRAQRQ--EILASNIANADTPG-------YQARDIDFASELSRVMSNGRAEGSSMALKVT 68

Query: 65  KI--GVDQSTFVEEFD-----PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  Q+      D     P  P A+ +       V++  E     + +  Y  +L  
Sbjct: 69  SARHIEAQTNGAPSMDMLYRIPDQPSADGN------TVDMDRERTQFADNSLKYQTDLTL 122

Query: 118 I-KQSHDMMT 126
           I  Q   MM+
Sbjct: 123 ISSQIKGMMS 132


>gi|258592561|emb|CBE68870.1| Flagellar basal body and hook proteins [NC10 bacterium 'Dutch
          sediment']
          Length = 245

 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 22/33 (66%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +++  + A SGL  Q A+M+ +S+N+AN  T G
Sbjct: 1  MVSGLYTAASGLMAQMAKMEALSQNLANTGTPG 33


>gi|251789165|ref|YP_003003886.1| flagellar basal-body rod protein FlgB [Dickeya zeae Ech1591]
 gi|247537786|gb|ACT06407.1| flagellar basal-body rod protein FlgB [Dickeya zeae Ech1591]
          Length = 139

 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKKIGVD-- 69
           L  Q    +I++ NIANA T G       Y+ + I F   ++     G V  + + +   
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFASELNKVMEKGRVDGQSVSLSLT 68

Query: 70  -----------QSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                             +  P  P  + +       V++  E  +  + +  Y  +L  
Sbjct: 69  SSRHIPAQTAQPPALDLLYRVPTQPALDGN------TVDMDRERTNFADNSLKYQGSLTL 122

Query: 118 IK-QSHDMMT 126
           I  Q   MM+
Sbjct: 123 INGQIKGMMS 132


>gi|170725961|ref|YP_001759987.1| flagellar hook-associated protein FlgK [Shewanella woodyi ATCC
          51908]
 gi|169811308|gb|ACA85892.1| flagellar hook-associated protein FlgK [Shewanella woodyi ATCC
          51908]
          Length = 637

 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 11/78 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          MD L    +IA +G+    +++ + S NIANA T         Y R+      + +   G
Sbjct: 3  MDLL----NIARTGVLASQSQLAVTSNNIANANT-------QGYHRQVAEQSSLDNQRLG 51

Query: 61 VRVKKIGVDQSTFVEEFD 78
                G   S     ++
Sbjct: 52 GNFFGSGTYISDVKRIYN 69


>gi|254853114|ref|ZP_05242462.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           R2-503]
 gi|300764493|ref|ZP_07074486.1| flagellar basal-body rod protein [Listeria monocytogenes FSL
           N1-017]
 gi|258606464|gb|EEW19072.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           R2-503]
 gi|300514847|gb|EFK41901.1| flagellar basal-body rod protein [Listeria monocytogenes FSL
           N1-017]
          Length = 259

 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ VE   + +  R+  A+   + 
Sbjct: 210 QNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVN 243


>gi|255023259|ref|ZP_05295245.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J1-208]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ VE   + +  R+  A+   + 
Sbjct: 202 QNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVN 235


>gi|221199746|ref|ZP_03572789.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           CGD2M]
 gi|221208649|ref|ZP_03581649.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           CGD2]
 gi|221171460|gb|EEE03907.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           CGD2]
 gi|221179985|gb|EEE12389.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           CGD2M]
          Length = 698

 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 658 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 696


>gi|254460576|ref|ZP_05073992.1| flagellar basal body FlaE domain protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206677165|gb|EDZ41652.1| flagellar basal body FlaE domain protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 267

 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            +G ++  NV++  E   M    + +  + + ++   DM+   
Sbjct: 223 QTGALESSNVDLTTEMTSMIRAQQQFSGSSRILQTYTDMIEKL 265



 Score = 33.7 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 7/53 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          SG++     + ++S N+ANA TT        +R+   SF ++ +G+    V +
Sbjct: 7  SGMSTSMFEISVVSNNVANAGTTA-------FRKSNASFADLYNGTSPETVSR 52


>gi|293409443|ref|ZP_06653019.1| flagellar basal-body rod protein FlgF [Escherichia coli B354]
 gi|291469911|gb|EFF12395.1| flagellar basal-body rod protein FlgF [Escherichia coli B354]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|224419257|ref|ZP_03657263.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491]
 gi|253826972|ref|ZP_04869857.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
 gi|313142759|ref|ZP_07804952.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
 gi|253510378|gb|EES89037.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
 gi|313131790|gb|EFR49407.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
          Length = 751

 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 13 SGLAVQSARMQIISENIANART 34
          SG+      + + S NIAN  T
Sbjct: 10 SGMQAHQVALDVESNNIANVNT 31


>gi|89098647|ref|ZP_01171529.1| flagellar basal-body rod protein B [Bacillus sp. NRRL B-14911]
 gi|89086609|gb|EAR65728.1| flagellar basal-body rod protein B [Bacillus sp. NRRL B-14911]
          Length = 135

 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 21/103 (20%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKKIGVDQSTFVE----- 75
           ++++NIANA T         Y+ K +SF+ V+      GG+  K+  V   +F       
Sbjct: 27  VVAQNIANADTPN-------YKAKDVSFKSVLQSEMAIGGIEAKRTDVRHYSFAAEGSGQ 79

Query: 76  --EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
                  +   N +G     NV++  E +++ E    Y A ++
Sbjct: 80  SGVIINKNTDFNHNGN----NVDMDKEMSELAENQIYYNALVE 118


>gi|223040425|ref|ZP_03610699.1| flagellar basal-body rod protein FlgB [Campylobacter rectus
          RM3267]
 gi|222878275|gb|EEF13382.1| flagellar basal-body rod protein FlgB [Campylobacter rectus
          RM3267]
          Length = 145

 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 7/47 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S LA ++ R Q+IS NIAN  T         Y+ + I+FE  +  + 
Sbjct: 16 SALASRNLRQQMISSNIANIDT-------PFYKARDIAFEAALSQTA 55


>gi|330808201|ref|YP_004352663.1| flagellar hook-associated protein [Pseudomonas brassicacearum
          subsp. brassicacearum NFM421]
 gi|327376309|gb|AEA67659.1| flagellar hook-associated protein [Pseudomonas brassicacearum
          subsp. brassicacearum NFM421]
          Length = 688

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 23/74 (31%), Gaps = 7/74 (9%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +I  SGL+     +     NIAN  T G       Y R+            G    
Sbjct: 1  MSLLNIGMSGLSASQTALVTTGNNIANVDTAG-------YSRQQTVQTTKASNQYGNVFI 53

Query: 65 KIGVDQSTFVEEFD 78
            G   +     ++
Sbjct: 54 GSGTTLADVRRVYN 67


>gi|238923132|ref|YP_002936645.1| flagellar basal body and hook protein [Eubacterium rectale ATCC
          33656]
 gi|238874804|gb|ACR74511.1| flagellar basal body and hook protein [Eubacterium rectale ATCC
          33656]
 gi|291523979|emb|CBK89566.1| fagellar hook-basal body proteins [Eubacterium rectale DSM 17629]
          Length = 266

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++   + A++G+  +  RM +++ N+AN+ T G
Sbjct: 1  MVKGLYTAHTGMVNEMKRMDVLANNLANSDTYG 33


>gi|213967581|ref|ZP_03395729.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1]
 gi|301385714|ref|ZP_07234132.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato Max13]
 gi|302060074|ref|ZP_07251615.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato K40]
 gi|302134833|ref|ZP_07260823.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213927882|gb|EEB61429.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1]
          Length = 586

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           G ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 542 GALEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   + 
Sbjct: 2  SFNTAISGINAANKRLEVAGNNIANSGTIG-------FKSSRAQFSALYSSAQ 47


>gi|182418416|ref|ZP_02949710.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521]
 gi|237666817|ref|ZP_04526802.1| flagellar basal body rod protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182377798|gb|EDT75342.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521]
 gi|237658016|gb|EEP55571.1| flagellar basal body rod protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 259

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV+   E   + +  R +  N + IK   + +   T +L R
Sbjct: 217 SNVDSTDEMIKLMQVKRQFETNQKFIKMQDETVQKATTELGR 258


>gi|302391042|ref|YP_003826862.1| flagellar hook-associated protein FlgK [Acetohalobium arabaticum
          DSM 5501]
 gi|302203119|gb|ADL11797.1| flagellar hook-associated protein FlgK [Acetohalobium arabaticum
          DSM 5501]
          Length = 801

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 18/85 (21%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-----EVM 55
          M    +   +    L VQ   + +   NI+NA T G       Y R+           + 
Sbjct: 1  MGSTFSGIELGKRALQVQRKSLDVTGHNISNANTEG-------YSRQEAIHATNRPHTIQ 53

Query: 56 HGSG------GVRVKKIGVDQSTFV 74
          HG+G      GV++ +I   +  F+
Sbjct: 54 HGTGAGQVGTGVKIDEIKRVRDEFI 78


>gi|126738579|ref|ZP_01754284.1| flagellar basal-body rod protein FlgF [Roseobacter sp. SK209-2-6]
 gi|126720378|gb|EBA17084.1| flagellar basal-body rod protein FlgF [Roseobacter sp. SK209-2-6]
          Length = 238

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
           DP   VA   G  +  NVN + +   M E  R Y  
Sbjct: 181 DPAENVAMLQGYTEGSNVNAIGQVTRMIEIQRAYEM 216



 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 7/41 (17%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          M++++ NIAN+ TTG       YR + + F E +  S G +
Sbjct: 19 MRVVANNIANSATTG-------YRSEGLIFSEYVQSSPGQQ 52


>gi|28869141|ref|NP_791760.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28852381|gb|AAO55455.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 586

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           G ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 542 GALEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   + 
Sbjct: 2  SFNTAISGINAANKRLEVAGNNIANSGTIG-------FKSSRAQFSALYSSAQ 47


>gi|170747255|ref|YP_001753515.1| flagellar basal body rod protein FlgF [Methylobacterium
          radiotolerans JCM 2831]
 gi|170653777|gb|ACB22832.1| flagellar basal body rod protein [Methylobacterium radiotolerans
          JCM 2831]
          Length = 246

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 8/44 (18%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          +S +A+Q   + +I+ N+AN  TTG       ++ +   FEE +
Sbjct: 10 SSQMALQRE-LDVIANNMANVSTTG-------FKARNTRFEEYL 45


>gi|161526179|ref|YP_001581191.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           ATCC 17616]
 gi|189349105|ref|YP_001944733.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           ATCC 17616]
 gi|160343608|gb|ABX16694.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           ATCC 17616]
 gi|189333127|dbj|BAG42197.1| flagellar hook-associated protein 1 [Burkholderia multivorans ATCC
           17616]
          Length = 659

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 619 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 657


>gi|153949847|ref|YP_001399640.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis IP 31758]
 gi|152961342|gb|ABS48803.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis IP 31758]
          Length = 453

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 18/75 (24%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------ 54
          M+++  +     SG+    A +   S NIAN  T G       Y R+      +      
Sbjct: 1  MNFIKTAF----SGMQATQAHLNATSMNIANIHTPG-------YSRQRAEQSAIGADGQG 49

Query: 55 -MHGSGGVRVKKIGV 68
           ++   GV V  I  
Sbjct: 50 GINAGNGVNVDAIRR 64



 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 18/40 (45%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             VN   E  ++ E  R Y +N++ I     + +  L L+
Sbjct: 414 SGVNNDEEAINLMEYQRAYQSNMKVIATGDKLFSDLLALI 453


>gi|90577345|ref|ZP_01233156.1| putative flagellar basal-body rod protein [Vibrio angustum S14]
 gi|90440431|gb|EAS65611.1| putative flagellar basal-body rod protein [Vibrio angustum S14]
          Length = 243

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           DP   VA  +G ++  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 188 DPS--VAMTAGHLEGSNVSAINELVSVMSLTRNFEMQVRMMKTAETLAQAGTRLM 240


>gi|323967018|gb|EGB62444.1| flagellar basal-body rod protein FlgF [Escherichia coli M863]
 gi|327253476|gb|EGE65114.1| flagellar basal-body rod protein FlgF [Escherichia coli STEC_7v]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|224825774|ref|ZP_03698878.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
 gi|224601998|gb|EEG08177.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
          Length = 118

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 12/74 (16%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          L  +  +  +++ NIAN      TPG   Y+ + + F   +  +         +D S+  
Sbjct: 18 LRAERTK--VLASNIAN----ETTPG---YQARDVDFRSALAAAA--DEADFPLDDSSGG 66

Query: 75 EEFD-PGHPVANAS 87
            +  P HP  + +
Sbjct: 67 LLYRVPNHPSRDGN 80


>gi|213028813|ref|ZP_03343260.1| hypothetical protein Salmonelentericaenterica_44008 [Salmonella
          enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 24

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 4  LIASAHIANSGLAVQSARMQI 24
          L+    IA S LA QS R+ +
Sbjct: 3  LLNIFDIAGSALAAQSKRLNV 23


>gi|51597631|ref|YP_071822.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis IP 32953]
 gi|186896765|ref|YP_001873877.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis PB1/+]
 gi|51590913|emb|CAH22569.1| putative flagellar hook-associated protein [Yersinia
          pseudotuberculosis IP 32953]
 gi|186699791|gb|ACC90420.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis PB1/+]
          Length = 453

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 12/62 (19%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSG 59
          M+++  +     SG+    A +   S NIAN  T G       Y R+      +   G G
Sbjct: 1  MNFIRTAF----SGMQATQAHLNATSMNIANMHTPG-------YSRQRAEQSAIGADGQG 49

Query: 60 GV 61
          GV
Sbjct: 50 GV 51



 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E  ++ E  R Y +N++ I     + +  L L
Sbjct: 414 SGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLAL 452


>gi|163789664|ref|ZP_02184102.1| flagellar hook-associated protein K [Carnobacterium sp. AT7]
 gi|159875196|gb|EDP69262.1| flagellar hook-associated protein K [Carnobacterium sp. AT7]
          Length = 98

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 15/82 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------- 53
          M  L  + + A  GL VQ + +Q  S NI+NA T G       Y R+ ++          
Sbjct: 1  MSGLFGTLNNATKGLLVQQSALQTTSHNISNANTEG-------YSRQKVTMVADNPYTLG 53

Query: 54 -VMHGSGGVRVKKIGVDQSTFV 74
           +     GVR+  I      +V
Sbjct: 54 GIGQLGTGVRIASIDRIVDPYV 75


>gi|326796600|ref|YP_004314420.1| flagellar basal-body rod protein FlgB [Marinomonas mediterranea
          MMB-1]
 gi|326547364|gb|ADZ92584.1| flagellar basal-body rod protein FlgB [Marinomonas mediterranea
          MMB-1]
          Length = 131

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L  +SAR  +++ NIANA T         Y+ + I+F+ ++   
Sbjct: 16 LKFRSARASVLANNIANADTPH-------YKARDITFDSMLQSE 52


>gi|320325094|gb|EFW81163.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           B076]
          Length = 586

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 545 EGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   S 
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANSGTIG-------FKSSRAQFSALYSASQ 47


>gi|289627764|ref|ZP_06460718.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330866423|gb|EGH01132.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 586

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 545 EGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   S 
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANSGTIG-------FKSSRAQFSALYSASQ 47


>gi|257484948|ref|ZP_05638989.1| flagellar basal-body protein, putative [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331011043|gb|EGH91099.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 586

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 545 EGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   S 
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANSGTIG-------FKSSRAQFSALYSASQ 47


>gi|325524325|gb|EGD02427.1| flagellar hook-associated protein FlgK [Burkholderia sp. TJI49]
          Length = 599

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 559 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 597


>gi|298487856|ref|ZP_07005896.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298157581|gb|EFH98661.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 586

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 545 EGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   S 
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANSGTIG-------FKSSRAQFSALYSASQ 47


>gi|211639036|emb|CAR67650.1| flagellar hook protein flge [Photorhabdus asymbiotica subsp.
          asymbiotica ATCC 43949]
          Length = 72

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 10/63 (15%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GVRV 63
          +   A SGL   +A + +I  NIANA T G       ++  + +F ++  GS    GV++
Sbjct: 2  AFSQAVSGLNAAAANLDVIGNNIANAATYG-------FKSSSAAFADIFAGSQVGLGVKM 54

Query: 64 KKI 66
            I
Sbjct: 55 SGI 57


>gi|206889963|ref|YP_002249841.1| flagellar hook-associated protein FlgK [Thermodesulfovibrio
          yellowstonii DSM 11347]
 gi|206741901|gb|ACI20958.1| flagellar hook-associated protein FlgK [Thermodesulfovibrio
          yellowstonii DSM 11347]
          Length = 554

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 10/77 (12%)

Query: 4  LIASAHIANSG-LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          L A   I  +G L  Q A ++++S NI+NA T G       Y R+ + F+ +  G   + 
Sbjct: 3  LTALFDIGKTGVLTYQKA-LEVVSHNISNAATEG-------YTRQDVIFQNMSSGILSLS 54

Query: 63 -VKKIGVDQSTFVEEFD 78
           V   GV        +D
Sbjct: 55 GVTGRGVKLEDIRRMYD 71


>gi|121533766|ref|ZP_01665593.1| flagellar basal-body rod protein FlgB [Thermosinus carboxydivorans
           Nor1]
 gi|121307757|gb|EAX48672.1| flagellar basal-body rod protein FlgB [Thermosinus carboxydivorans
           Nor1]
          Length = 164

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 23/120 (19%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR----------VKKIGVDQSTF 73
           +IS NIAN  T G       ++R  + FEE +  +   +          +   G D S  
Sbjct: 57  VISNNIANVNTPG-------FKRSEVHFEEQLKQALNAKSGLSRTHQRHIAAKGDDFSVE 109

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V   +     A+ +      NV++  E A+M + N  Y A  Q + +    + + ++  R
Sbjct: 110 VITVNNTAYRADGN------NVDIDFEMAEMAKNNIYYDAVAQQLNRYFSNLKSVINEGR 163


>gi|330986469|gb|EGH84572.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 586

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 545 EGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   S 
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANSGTIG-------FKSSRAQFSALYSASQ 47


>gi|325291945|ref|YP_004277809.1| flagellar basal body rod protein FlgF [Agrobacterium sp. H13-3]
 gi|325059798|gb|ADY63489.1| flagellar basal body rod protein FlgF [Agrobacterium sp. H13-3]
          Length = 244

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 31/89 (34%), Gaps = 13/89 (14%)

Query: 50  SFEE------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
            F+       + H + GV+        +      +  H V    G ++  NVN + +   
Sbjct: 159 VFQADFSKGFLRHPNSGVKPV------APPTPVVN-NHEVGVVQGYLEQSNVNGISQMTQ 211

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           + + NR + +    ++ +       +  L
Sbjct: 212 LIQVNRAFESISSLMRDTESTFGDAIKTL 240



 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          + +  ++A S       R+  IS+N+ANA T G       +R   + F+E+
Sbjct: 1  MQSGLYVALSSQIALERRLTTISDNMANANTVG-------FRGSEVKFDEM 44


>gi|289651646|ref|ZP_06482989.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 586

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 545 EGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   S 
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANSGTIG-------FKSSRAQFSALYSASQ 47


>gi|154174960|ref|YP_001407311.1| hypothetical protein CCV52592_2049 [Campylobacter curvus 525.92]
 gi|153793155|gb|EAU00899.2| conserved hypothetical protein [Campylobacter curvus 525.92]
          Length = 533

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++     ++    + Y A+ ++I  S +M+ T + +
Sbjct: 490 EMSNVDLGQALTEVIVIQKAYDASAKSITTSDEMIQTAIKM 530


>gi|88811798|ref|ZP_01127052.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
 gi|88791189|gb|EAR22302.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
          Length = 131

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 12/50 (24%)

Query: 14 GLAVQSA-----RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          GL  Q+      R Q+++ NIANA T         Y+ +   F  V+H +
Sbjct: 10 GLPAQALELRAKRTQLLASNIANADTPH-------YKARDFDFSNVLHQA 52


>gi|320329353|gb|EFW85346.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330880525|gb|EGH14674.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 586

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 545 EGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   S 
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANSGTIG-------FKSSRAQFSALYSASQ 47


>gi|237752943|ref|ZP_04583423.1| flagellar hook-associated protein FlgK [Helicobacter winghamensis
          ATCC BAA-430]
 gi|229375210|gb|EEO25301.1| flagellar hook-associated protein FlgK [Helicobacter winghamensis
          ATCC BAA-430]
          Length = 608

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 7/49 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
          M  L++S +   +GL      + +   NIANA        ++ Y R+ +
Sbjct: 1  MGGLLSSLNTPYTGLTGHQVMVDVTGNNIANAN-------NEFYSRQVV 42


>gi|206558969|ref|YP_002229729.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia
          J2315]
 gi|198035006|emb|CAR50878.1| flagellar basal-body rod protein FlgF (putative proximal rod
          protein) [Burkholderia cenocepacia J2315]
          Length = 252

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISF 51
          MD LI       + +   S  +    +++ N+ANA TTG       YR   ++F
Sbjct: 1  MDRLIY------TAMTGASQSLDQQAVVANNLANASTTGFRAQLATYRAVPMNF 48



 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 16/42 (38%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +     M +  R +    + I+ +     T   LL
Sbjct: 208 EGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQTANQLL 249


>gi|51598554|ref|YP_072742.1| flagellar basal body rod protein FlgB [Borrelia garinii PBi]
 gi|51573125|gb|AAU07150.1| flagellar basal-body rod protein [Borrelia garinii PBi]
          Length = 135

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    S   ++  L V S R  +IS+NIAN  T         ++R  ISFE  +  +
Sbjct: 1  MNDFERSIDFSHRYLDVLSLRQGVISDNIANVDTPN-------FKRSRISFESELEKA 51


>gi|71734109|ref|YP_275562.1| flagellar basal-body protein [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71554662|gb|AAZ33873.1| flagellar basal-body protein, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 586

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 545 EGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   S 
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANSGTIG-------FKSSRAQFSALYSASQ 47


>gi|89072314|ref|ZP_01158893.1| putative flagellar basal-body rod protein [Photobacterium sp.
           SKA34]
 gi|89051846|gb|EAR57298.1| putative flagellar basal-body rod protein [Photobacterium sp.
           SKA34]
          Length = 243

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           DP   VA  +G ++  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 188 DPS--VAMTAGHLEGSNVSAINELVSVMSLTRNFEMQVRMMKTAETLAQAGTRLM 240


>gi|296135672|ref|YP_003642914.1| flagellar basal-body rod protein FlgF [Thiomonas intermedia K12]
 gi|295795794|gb|ADG30584.1| flagellar basal-body rod protein FlgF [Thiomonas intermedia K12]
          Length = 245

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 8/62 (12%)

Query: 78  DPGHPVANASGIVKY-------PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           D   P A A G V+         NVN +     + +  R +    + ++           
Sbjct: 182 DTQGP-APADGNVQLAVGALEGSNVNPVQAMIQILDNTRAFEMQTKLMQTVDQNHQAATQ 240

Query: 131 LL 132
           LL
Sbjct: 241 LL 242


>gi|284989567|ref|YP_003408121.1| flagellar hook-associated protein FlgK [Geodermatophilus obscurus
          DSM 43160]
 gi|284062812|gb|ADB73750.1| flagellar hook-associated protein FlgK [Geodermatophilus obscurus
          DSM 43160]
          Length = 482

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 11/72 (15%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M       + A + L      + +  +NIAN  T G       Y R+ +     +   GG
Sbjct: 1  MSSTFGGLNTARTALWASQRGLDVTGQNIANVNTDG-------YSRQRV----ELRAMGG 49

Query: 61 VRVKKIGVDQST 72
            V  I    S 
Sbjct: 50 TAVPAIHSVSSP 61


>gi|187926957|ref|YP_001893302.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
 gi|241665286|ref|YP_002983645.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12D]
 gi|187728711|gb|ACD29875.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
 gi|240867313|gb|ACS64973.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12D]
          Length = 151

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           L ++S R QI++ NIANA T         Y+ +   F+  +  + G +
Sbjct: 15 ALRLRSQRHQILASNIANADTPN-------YKARDFDFQSALQKAVGQQ 56


>gi|325921025|ref|ZP_08182907.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           gardneri ATCC 19865]
 gi|325548507|gb|EGD19479.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           gardneri ATCC 19865]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV+      +M +  R +   ++ IK   D   +   ++R
Sbjct: 202 SGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSMMR 248


>gi|295697521|ref|YP_003590759.1| flagellar hook-associated protein FlgK [Bacillus tusciae DSM 2912]
 gi|295413123|gb|ADG07615.1| flagellar hook-associated protein FlgK [Bacillus tusciae DSM 2912]
          Length = 540

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 17/36 (47%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V++  E A+M    + Y A+ + +     M+   ++
Sbjct: 498 VSIDEEMANMIRFQQAYGASARMVTAIDQMLDKLIN 533


>gi|161503738|ref|YP_001570850.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865085|gb|ABX21708.1| hypothetical protein SARI_01823 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 138

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 41/128 (32%), Gaps = 29/128 (22%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--------SGGVRVKKI 66
           L  Q    +I++ NIANA T G       Y+ + I F   +          +GGV +   
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFASELKKVMVRGREETGGVSLTLT 68

Query: 67  GVDQSTFVEEFDPG------HPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTI- 118
                       P        P   +  G      V++  E A   + +  Y   L  + 
Sbjct: 69  SSHHIPAQAVSSPAVDLLYRVPDQPSLDGN----TVDMDRERAQFADNSLKYQMGLTVLG 124

Query: 119 KQSHDMMT 126
            Q   MM 
Sbjct: 125 SQLKGMMN 132


>gi|300693344|ref|YP_003749317.1| flagellar hook-filament junction protein 1 [Ralstonia
          solanacearum PSI07]
 gi|299075381|emb|CBJ34676.1| flagellar hook-filament junction protein 1 [Ralstonia
          solanacearum PSI07]
          Length = 642

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +  +I  +GL V    +Q+   NIANA     TPG   Y R+     E    + G     
Sbjct: 4  SLLNIGATGLRVADINLQVTGNNIANA----STPG---YSRQEAVQTENTPMATGAGYLG 56

Query: 66 IGVDQSTFVEEFDP 79
           GV+ +T    +D 
Sbjct: 57 QGVNVTTVKRIYDQ 70



 Score = 34.1 bits (78), Expect = 6.6,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 20/37 (54%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E  ++ +  + Y A+ + ++ ++ +  + L +
Sbjct: 603 VNLDDEAMNLMKYQQAYQASAKVMQTANSLFDSLLSI 639


>gi|300693334|ref|YP_003749307.1| flagellar component of cell-proximal portion of basal-body rod,
          protein flgb [Ralstonia solanacearum PSI07]
 gi|299075371|emb|CBJ34666.2| flagellar component of cell-proximal portion of basal-body rod,
          protein flgb [Ralstonia solanacearum PSI07]
          Length = 175

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           L ++S R Q+++ NIANA T         Y+ +   F+  +  + G +
Sbjct: 37 ALRLRSQRHQLLASNIANADTPS-------YKARDFDFQSALQKAVGQQ 78


>gi|291280513|ref|YP_003497348.1| flagellar hook-associated protein 1 FlgK [Deferribacter
           desulfuricans SSM1]
 gi|290755215|dbj|BAI81592.1| flagellar hook-associated protein 1 FlgK [Deferribacter
           desulfuricans SSM1]
          Length = 584

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 18/36 (50%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V++  E  ++ +  + Y AN + I    +M+   ++
Sbjct: 542 VSLDEEFTNLIKFQKAYEANARFITAVDEMLDRLIN 577


>gi|52841452|ref|YP_095251.1| flagellar basal body rod protein FlgF [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|52628563|gb|AAU27304.1| flagellar basal body rod protein FlgF [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
          Length = 248

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV  + +   M    R + A ++ +    D       LL+
Sbjct: 200 QSGALEGSNVKAIDQMVAMISAGREFDAQMKLLSTVDDNGQKLAQLLQ 247


>gi|332187897|ref|ZP_08389630.1| flagellar hook-associated protein FlgK [Sphingomonas sp. S17]
 gi|332012058|gb|EGI54130.1| flagellar hook-associated protein FlgK [Sphingomonas sp. S17]
          Length = 447

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 17/75 (22%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
          +     I  SG+      +  + ENIAN  T G       Y R+T++  EV+  +G    
Sbjct: 1  MSDLLSIGASGVRAYQTALTAVGENIANVGTDG-------YSRRTVTMREVVPAAGLAAN 53

Query: 60 ------GVRVKKIGV 68
                GV V  I  
Sbjct: 54 KVSAGSGVAVAGIAR 68


>gi|323967014|gb|EGB62440.1| flagellar basal-body rod protein FlgB [Escherichia coli M863]
 gi|323976554|gb|EGB71642.1| flagellar basal-body rod protein FlgB [Escherichia coli TW10509]
 gi|327253472|gb|EGE65110.1| flagellar basal-body rod protein FlgB [Escherichia coli STEC_7v]
          Length = 138

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 14/60 (23%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          L  Q    ++++ NIANA T G       Y+ + I F   +      +V + G D+++ V
Sbjct: 18 LRAQRQ--EVLAANIANADTPG-------YQARDIDFASELK-----KVMQRGRDETSMV 63


>gi|229102371|ref|ZP_04233079.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-28]
 gi|228681018|gb|EEL35187.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-28]
          Length = 267

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+  + ++  A+ + +     +      ++LR
Sbjct: 226 SNVDMTKEMADLMSSQKMIQASQRIMTSFDKIYEKEANEILR 267


>gi|114799934|ref|YP_758986.1| flagellar basal body rod protein FlgF [Hyphomonas neptunium ATCC
           15444]
 gi|114740108|gb|ABI78233.1| flagellar basal-body rod protein FlgF [Hyphomonas neptunium ATCC
           15444]
          Length = 238

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV+ ++E + M E  R Y A    +++    ++  +  +R
Sbjct: 190 QGALEQSNVSPVLEVSRMIEVQRAYEAGQALLEKEDQRISQLITAVR 236


>gi|89068730|ref|ZP_01156116.1| flagellar basal-body rod protein FlgF [Oceanicola granulosus
           HTCC2516]
 gi|89045693|gb|EAR51755.1| flagellar basal-body rod protein FlgF [Oceanicola granulosus
           HTCC2516]
          Length = 248

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 16/44 (36%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NV  +VE   M    + Y    + +    ++    L 
Sbjct: 200 QGALEGSNVQPIVEMTRMMAIQKSYEQATKLMGTGDELRKDALR 243


>gi|332531619|ref|ZP_08407516.1| flagellar basal-body rod protein FlgF [Hylemonella gracilis ATCC
           19624]
 gi|332038982|gb|EGI75411.1| flagellar basal-body rod protein FlgF [Hylemonella gracilis ATCC
           19624]
          Length = 246

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +     M +T R +   ++ ++ +     +   LL
Sbjct: 198 GVLEGSNVNAVETMVGMIQTARQFEQQMRMLQTAESDDRSAAKLL 242


>gi|302392399|ref|YP_003828219.1| flagellar basal-body rod protein FlgB [Acetohalobium arabaticum
          DSM 5501]
 gi|302204476|gb|ADL13154.1| flagellar basal-body rod protein FlgB [Acetohalobium arabaticum
          DSM 5501]
          Length = 135

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 9/60 (15%)

Query: 1  MDYLIASAHIA--NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          MD +  +  I+     L     R + IS NIAN  T    P    Y+RK ++F+  +  +
Sbjct: 1  MDNITGNQSISVLTKALDGLQQRQEAISNNIANVDT----PD---YKRKDVNFKSELKTA 53


>gi|294339842|emb|CAZ88205.1| putative flagellar basal-body rod protein FlgF [Thiomonas sp. 3As]
          Length = 245

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 16/92 (17%)

Query: 56  HGSGGVRVKKIGVDQSTFVEEF--------DPGHPVANASGIVKY-------PNVNVLVE 100
             +  V V +I +      +          D   P A A G V+         NVN +  
Sbjct: 152 QPNALVVVNRIQLVNPPPAQMQRGADGLFRDTQGP-APADGNVQLAVGALEGSNVNPVQA 210

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              + +  R +    + ++           LL
Sbjct: 211 MIQILDNTRAFEMQTKLMQTVDQNHQAATQLL 242


>gi|157959901|ref|YP_001499935.1| flagellar basal-body rod protein FlgF [Shewanella pealeana ATCC
           700345]
 gi|157844901|gb|ABV85400.1| flagellar basal-body rod protein FlgF [Shewanella pealeana ATCC
           700345]
          Length = 241

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           +SG ++  NV  + E     + +R +   ++ +K +  +      LLRD
Sbjct: 192 SSGFLEASNVQAVGELIAAMDLSRQFEVQVKLMKSAEKLAEAGNRLLRD 240



 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 8/30 (26%)

Query: 11 ANSG----LAVQSARMQIISENIANARTTG 36
          A SG    +  Q+ R    + N+ANA TTG
Sbjct: 5  AASGASRVMEAQAIR----ANNLANADTTG 30


>gi|146305251|ref|YP_001185716.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp]
 gi|145573452|gb|ABP82984.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp]
          Length = 243

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 7/79 (8%)

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANAS------GIVKYPNVNVLVETADMRETNRLYMAN 114
           V    +  D S  +   D G P  +        G ++  NV  + +       NRL+   
Sbjct: 164 VAAGDLIKDASGLLARSD-GQPAEDMEAPVLVSGYLEASNVGAIDQLVATMSLNRLFETQ 222

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ +K + D+      ++R
Sbjct: 223 VKMMKAAEDLSEAGNRMIR 241


>gi|23016696|ref|ZP_00056449.1| COG1256: Flagellar hook-associated protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 858

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 VN+  E A+M    + Y A+ + I    +M+   +++++
Sbjct: 814 YASTSGVNLDEEVANMINFQQAYSASAKVISTLQEMLDVLVNIVK 858



 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 7/62 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L    + A SGL      + +IS+N+ N  T G       Y RK ++ E  +    G  V
Sbjct: 3  LTLGLNTAVSGLLTNQKGLDVISQNVVNVNTKG-------YVRKQMTPESRVVAGVGAGV 55

Query: 64 KK 65
          ++
Sbjct: 56 QQ 57


>gi|326389602|ref|ZP_08211168.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          ethanolicus JW 200]
 gi|325994317|gb|EGD52743.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          ethanolicus JW 200]
          Length = 482

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 20/77 (25%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
               IA +GL V    + +   NIANA T G       Y R+ +    +   +      
Sbjct: 4  FQGLEIAKTGLFVSQKALDVTGHNIANANTPG-------YTRQVVDMASIAPPTTFGMYD 56

Query: 60 --------GVRVKKIGV 68
                  GV+++ I  
Sbjct: 57 QWGKAIGEGVKIQDIRQ 73


>gi|317492427|ref|ZP_07950856.1| flagellar basal-body rod protein FlgF [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919766|gb|EFV41096.1| flagellar basal-body rod protein FlgF [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 251

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I+   D       LL
Sbjct: 204 GVLEGSNVKPVDTMVDMIANARRFEMQMKVIRSVDDNEQKANQLL 248


>gi|289548727|ref|YP_003473715.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484]
 gi|289182344|gb|ADC89588.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484]
          Length = 241

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            G ++  NVN + E   + E +R +      I+    +   
Sbjct: 195 QGFLEDANVNPIEELVKLIEAHRAHEIYTNLIRSLDQLQEK 235


>gi|152990394|ref|YP_001356116.1| flagellar hook-associated protein 1 FliK [Nitratiruptor sp.
           SB155-2]
 gi|151422255|dbj|BAF69759.1| flagellar hook-associated protein 1 FliK [Nitratiruptor sp.
           SB155-2]
          Length = 596

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E   + +  R Y A  + +  + ++  T +++ R
Sbjct: 556 SGVNLDEELVKLTQLQRSYQATARVMMVTDELFKTLIEMTR 596


>gi|146278634|ref|YP_001168793.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556875|gb|ABP71488.1| Flagellar basal body protein-like protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 127

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 24/118 (20%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKT-ISFEEVMHGSGGVRVKKIGVDQSTFVE---- 75
           R  +I+ N+AN+ T G       YR +    FE    G  G+R  + G  +S        
Sbjct: 21  RTDVIARNVANSDTPG-------YRARDLPDFESYAEGRTGLRGTRAGHLRSAAAVAAEP 73

Query: 76  ----EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                     P  N+        V++  E        + +   L   + S  ++ T+L
Sbjct: 74  VPAGIMGTASPNGNS--------VSLEEEMVKAVSARQQHEMALSIYQSSSRLIRTSL 123


>gi|89902478|ref|YP_524949.1| flagellar basal-body rod FlgF [Rhodoferax ferrireducens T118]
 gi|89347215|gb|ABD71418.1| Flagellar basal-body rod FlgF [Rhodoferax ferrireducens T118]
          Length = 246

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G ++  NVN +     M +T R +   ++ ++ +     +   LL
Sbjct: 198 GSLEGSNVNAIEAMVGMIQTARQFETQMRLLQTAESNDRSAAQLL 242


>gi|15887904|ref|NP_353585.1| flagellar basal body rod protein FlgF [Agrobacterium tumefaciens
           str. C58]
 gi|2459708|gb|AAB71784.1| FlgF [Agrobacterium tumefaciens]
 gi|15155496|gb|AAK86370.1| flagellar basal body rod protein [Agrobacterium tumefaciens str.
           C58]
          Length = 244

 Score = 35.3 bits (81), Expect = 2.5,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 17/37 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            G ++  NVN + +   + + NR + +    ++ +  
Sbjct: 195 QGYLEQSNVNGISQMTQLIQVNRAFESISSMMRDTES 231


>gi|57242333|ref|ZP_00370272.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis
          RM3195]
 gi|57017013|gb|EAL53795.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis
          RM3195]
          Length = 143

 Score = 35.3 bits (81), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M     S  +  S LA ++ R Q+I+ N+AN  T         Y+ + + FE  +
Sbjct: 1  MINPFKSKELVTSALAGRNLRNQLINSNLANVDT-------PFYKARDVEFETAL 48


>gi|256043052|ref|ZP_05445997.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 70

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 18/40 (45%), Gaps = 6/40 (15%)

Query: 79  PGHPVANAS------GIVKYPNVNVLVETADMRETNRLYM 112
           P  PV + +      G+++  NV+ + E   +   +R + 
Sbjct: 6   PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFE 45


>gi|256830170|ref|YP_003158898.1| flagellar hook-associated protein FlgK [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579346|gb|ACU90482.1| flagellar hook-associated protein FlgK [Desulfomicrobium baculatum
           DSM 4028]
          Length = 697

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  ++ +    Y A  + I  +  M+   L L
Sbjct: 657 SGVNLDEEMTNLIKFQHAYTAAAKLITTAESMLEVLLGL 695


>gi|46202499|ref|ZP_00053126.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum
           magnetotacticum MS-1]
          Length = 354

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV +  + + M  T + Y  N    K + +M  T  DL+
Sbjct: 312 EASNVALEDQFSKMIVTQKAYSTNANVFKTADEMTQTVRDLI 353


>gi|212634354|ref|YP_002310879.1| flagellar basal body rod protein [Shewanella piezotolerans WP3]
 gi|212555838|gb|ACJ28292.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3]
          Length = 640

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +    IA +G+    +++ I S NIANA T G       Y R+  S   +     G    
Sbjct: 3  MDLLSIARTGVLASQSQLAITSNNIANANTDG-------YNRQVASQSALDSQRMGNEFY 55

Query: 65 KIGVDQSTFVEEFD 78
            G   S     ++
Sbjct: 56 GAGTYVSDVKRVYN 69


>gi|254516986|ref|ZP_05129044.1| flagellar basal-body rod protein FlgB [gamma proteobacterium
          NOR5-3]
 gi|219674491|gb|EED30859.1| flagellar basal-body rod protein FlgB [gamma proteobacterium
          NOR5-3]
          Length = 135

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 11/64 (17%)

Query: 1  MDYLIASAHIANS--GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L ++  I+     L  Q   +  ++ NIAN+ T G       Y+ + I F   M  +
Sbjct: 6  MGTLDSALGISPQVLALRAQKTEL--LAANIANSDTPG-------YKARDIDFSAAMANA 56

Query: 59 GGVR 62
           G +
Sbjct: 57 SGAQ 60


>gi|224532015|ref|ZP_03672647.1| flagellar basal-body rod protein FlgB [Borrelia valaisiana VS116]
 gi|224511480|gb|EEF81886.1| flagellar basal-body rod protein FlgB [Borrelia valaisiana VS116]
          Length = 135

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    S   ++  L V S R  +IS+NIAN  T         ++R  ISFE  +  +
Sbjct: 1  MNDFERSIDFSHRYLDVLSLRQSVISDNIANVNTPN-------FKRSKISFESELEKA 51


>gi|27380964|ref|NP_772493.1| hypothetical protein bll5853 [Bradyrhizobium japonicum USDA 110]
 gi|27354130|dbj|BAC51118.1| bll5853 [Bradyrhizobium japonicum USDA 110]
          Length = 627

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 16/36 (44%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           VN+  E +++ +    Y AN   +     MM T + 
Sbjct: 589 VNLDSEMSNLIQLQNAYAANAHVMSVVQSMMNTLIQ 624


>gi|57505236|ref|ZP_00371165.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
          upsaliensis RM3195]
 gi|57016372|gb|EAL53157.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
          upsaliensis RM3195]
          Length = 608

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 8/61 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-GSGGVR 62
          + A+ H   +GL     ++     NI+NA  T        Y R+ +      +  +GGV+
Sbjct: 3  IFATLHTGVTGLKASEVQIATTGNNISNANAT-------FYTRQRVVQTTNGYITTGGVQ 55

Query: 63 V 63
          V
Sbjct: 56 V 56


>gi|315639201|ref|ZP_07894363.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
          upsaliensis JV21]
 gi|315480527|gb|EFU71169.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
          upsaliensis JV21]
          Length = 608

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 8/61 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-GSGGVR 62
          + A+ H   +GL     ++     NI+NA  T        Y R+ +      +  +GGV+
Sbjct: 3  IFATLHTGVTGLKASEVQIATTGNNISNANAT-------FYTRQRVVQTTNGYITTGGVQ 55

Query: 63 V 63
          V
Sbjct: 56 V 56


>gi|302670715|ref|YP_003830675.1| flagellar basal-body rod protein FlgB [Butyrivibrio
          proteoclasticus B316]
 gi|302395188|gb|ADL34093.1| flagellar basal-body rod protein FlgB [Butyrivibrio
          proteoclasticus B316]
          Length = 131

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 7/41 (17%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           R ++I+ NIAN  T G       Y+R+ ++FE+ +  + G
Sbjct: 22 LRNEVIANNIANVDTPG-------YKRQDLNFEDELERALG 55


>gi|229096257|ref|ZP_04227230.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-29]
 gi|229115212|ref|ZP_04244622.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-3]
 gi|228668352|gb|EEL23784.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-3]
 gi|228687217|gb|EEL41122.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-29]
          Length = 267

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+  + ++  A+ + +     +      ++LR
Sbjct: 226 SNVDMTKEMADLMSSQKMIQASQRIMTSFDKIYEKEANEILR 267


>gi|163742564|ref|ZP_02149950.1| flagellar hook-associated protein K [Phaeobacter gallaeciensis
          2.10]
 gi|161384149|gb|EDQ08532.1| flagellar hook-associated protein K [Phaeobacter gallaeciensis
          2.10]
          Length = 472

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 7/60 (11%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
          +GL        ++SEN++N      TPG   Y R++++      G  GV+V  +      
Sbjct: 2  TGLTAAGRSTSVVSENLSNV----LTPG---YSRRSLALTSAGDGFSGVKVGHVQRINDP 54


>gi|91792670|ref|YP_562321.1| flagellar hook-associated protein [Shewanella denitrificans
          OS217]
 gi|91714672|gb|ABE54598.1| Flagellar hook-associated protein [Shewanella denitrificans
          OS217]
          Length = 639

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 7/71 (9%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+    A++ + S NIANA T G       Y R+            G      G
Sbjct: 6  LNIARTGVLASQAQLGVTSNNIANANTEG-------YHRQVAQQGTTDPQMLGGNYYGTG 58

Query: 68 VDQSTFVEEFD 78
             S     ++
Sbjct: 59 TYVSDVKRIYN 69


>gi|300114802|ref|YP_003761377.1| flagellar basal-body rod protein FlgB [Nitrosococcus watsonii
          C-113]
 gi|299540739|gb|ADJ29056.1| flagellar basal-body rod protein FlgB [Nitrosococcus watsonii
          C-113]
          Length = 131

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 7/42 (16%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          S R +I++ N+AN    GDTPG   Y+ + I F+  +  + G
Sbjct: 20 SRRAEILAANLAN----GDTPG---YKARDIDFKAALQQAQG 54


>gi|238758109|ref|ZP_04619289.1| Flagellar basal-body rod protein flgF [Yersinia aldovae ATCC 35236]
 gi|238703647|gb|EEP96184.1| Flagellar basal-body rod protein flgF [Yersinia aldovae ATCC 35236]
          Length = 251

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKAVEAMTDMIANARSFEMQMKVIHSVDENEQRANQLL 248


>gi|163803166|ref|ZP_02197049.1| flagellar basal-body rod protein B [Vibrio sp. AND4]
 gi|159173066|gb|EDP57899.1| flagellar basal-body rod protein B [Vibrio sp. AND4]
          Length = 120

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            L  +  R ++++ N+AN  T G       Y  K +SF  VM     V    +      F
Sbjct: 15  ALNFRVQRTKVLASNLANVDTPG-------YLAKDLSFTTVMDQ---VSASSVNEPVPKF 64

Query: 74  VEEFDPGHPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             E     P  N+  G      V + VE A   + N  +  +L  I      +   ++
Sbjct: 65  RVEAQYSMPYQNSKDGN----TVELGVEQAKFTQNNMDFQTSLTFINMKFSGLAKAIE 118


>gi|88799021|ref|ZP_01114602.1| Flagellar hook protein FlgE [Reinekea sp. MED297]
 gi|88778248|gb|EAR09442.1| Flagellar hook protein FlgE [Reinekea sp. MED297]
          Length = 1472

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93   PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              V++  +   +    R Y A+ +TI+ ++ +  T ++L
Sbjct: 1433 STVDLSEQLVHLIIAQRNYQASAKTIETANAVTQTIINL 1471


>gi|315638444|ref|ZP_07893621.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis
          JV21]
 gi|315481435|gb|EFU72062.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis
          JV21]
          Length = 143

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M     S  +  S LA ++ R Q+I+ N+AN  T         Y+ + + FE  +
Sbjct: 1  MINPFKSKELVTSALAGRNLRNQLINSNLANVDT-------PFYKARDVEFETAL 48


>gi|297570285|ref|YP_003691629.1| flagellar hook-associated protein FlgK [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296926200|gb|ADH87010.1| flagellar hook-associated protein FlgK [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 870

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ +    Y A  + I  S +M+ T LD +R
Sbjct: 830 SGVSLDEEMANLIKFQHAYTAAARLISTSDEMLVTLLDTVR 870


>gi|229591870|ref|YP_002873989.1| flagellar basal body rod protein FlgF [Pseudomonas fluorescens
           SBW25]
 gi|229363736|emb|CAY51141.1| flagellar basal-body rod protein [Pseudomonas fluorescens SBW25]
          Length = 246

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 19/37 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           SG ++  NVN + E   +   ++ +  +++ +  + +
Sbjct: 198 SGFLQASNVNAVEEMTAVLALSKQFELHIKMMNSAKE 234


>gi|229058421|ref|ZP_04196805.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH603]
 gi|228719930|gb|EEL71520.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH603]
          Length = 257

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+  + ++  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMSSQKMIQASQRIMTSFDKIYEKEANEILR 257


>gi|229132600|ref|ZP_04261448.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST196]
 gi|228650832|gb|EEL06819.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST196]
          Length = 257

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+  + ++  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMSSQKMIQASQRIMTSFDKIYEKEANEILR 257


>gi|115522802|ref|YP_779713.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisA53]
 gi|115516749|gb|ABJ04733.1| flagellar basal body FlaE domain protein [Rhodopseudomonas
          palustris BisA53]
          Length = 421

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          L  +   A S L  QS  + +IS+NIAN++T G
Sbjct: 3  LTGALSSAISALNSQSQSLAMISDNIANSQTVG 35



 Score = 33.4 bits (76), Expect = 9.6,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   E ++M    + Y A  Q I   ++M  T +  +R
Sbjct: 384 DTNTEFSNMISAQQAYSAASQVITAVNEMFDTLISAVR 421


>gi|262273522|ref|ZP_06051336.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP
           101886]
 gi|262222500|gb|EEY73811.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP
           101886]
          Length = 464

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E   + +  ++Y AN + I  +  ++  T+ +
Sbjct: 424 SGVNLDEEAVSLMQFTQMYQANAKVISTAQQLLDITMGM 462


>gi|187918168|ref|YP_001883731.1| flagellar basal body rod protein FlgB [Borrelia hermsii DAH]
 gi|119861016|gb|AAX16811.1| flagellar basal-body rod protein FlgB [Borrelia hermsii DAH]
          Length = 135

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    S  +A+  L V S R  +I++NIAN  T         ++R  ++FE  +  +
Sbjct: 1  MNIFEMSVDLAHRYLDVLSLRQSVIADNIANVDTPN-------FKRSKVTFEAELERA 51


>gi|329938430|ref|ZP_08287855.1| alpha-L-arabinofuranosidase [Streptomyces griseoaurantiacus M045]
 gi|329302403|gb|EGG46294.1| alpha-L-arabinofuranosidase [Streptomyces griseoaurantiacus M045]
          Length = 499

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
           +      V   + G  V+ +G    T +  ++PGHP AN  G  +   V+++ E 
Sbjct: 10  RQAVVAPVRRRTFGSFVEHLGRSVYTGL--YEPGHPTANEDGF-RMDVVDLVREL 61


>gi|294140191|ref|YP_003556169.1| flagellar hook-associated protein FlgK [Shewanella violacea
          DSS12]
 gi|293326660|dbj|BAJ01391.1| flagellar hook-associated protein FlgK, putative [Shewanella
          violacea DSS12]
          Length = 638

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 11/78 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          MD L    +IA +G+    +++ + S NIANA T         Y R+      +     G
Sbjct: 3  MDLL----NIARTGVLASQSQLAVTSNNIANANT-------QGYHRQVAEQSSLESQRFG 51

Query: 61 VRVKKIGVDQSTFVEEFD 78
                G   S     ++
Sbjct: 52 DSFYGAGTYISDVKRIYN 69


>gi|222147568|ref|YP_002548525.1| flagellar basal body rod protein FlgB [Agrobacterium vitis S4]
 gi|221734556|gb|ACM35519.1| flagellar basal-body rod protein FlgB [Agrobacterium vitis S4]
          Length = 130

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 14/117 (11%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMH--GSGGVRVKKIGVDQSTFVE 75
           S R ++I+ NIANA T         +  K I+ F  ++     G  R     +  S    
Sbjct: 18  SLRQEVIAGNIANANTPK-------FMAKDITPFNAILDVRQFGMARTNSKHMASSDLNT 70

Query: 76  EFDPGHPVANASG----IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           + D     A  +G     V   +V +  E   M E  R +  N   +   + MM  T
Sbjct: 71  DLDVDIREAPLNGEIGVQVSGNSVALADEMTKMGEIQRQHSLNTNLVSSFNRMMLMT 127


>gi|46578934|ref|YP_009742.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448346|gb|AAS95001.1| flagellar hook-associated protein FlgK, putative [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|311232792|gb|ADP85646.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
           RCH1]
          Length = 698

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A + +    Y A  + +  + +M    L L
Sbjct: 658 SGVNLDEEMASLVKFQHSYKAAAKLVTTADEMFQVLLRL 696


>gi|15616183|ref|NP_244488.1| flagellar hook-associated protein FlgK [Bacillus halodurans
          C-125]
 gi|10176245|dbj|BAB07340.1| flagellar hook-associated protein 1 (HAP1) [Bacillus halodurans
          C-125]
          Length = 556

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 7/47 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
                A  G+  Q A ++ +  NIANA T G       Y R+ ++F
Sbjct: 6  FHGLETARRGMMTQQAALRTVGHNIANANTPG-------YTRQRVNF 45


>gi|312879592|ref|ZP_07739392.1| flagellar basal body rod protein [Aminomonas paucivorans DSM
          12260]
 gi|310782883|gb|EFQ23281.1| flagellar basal body rod protein [Aminomonas paucivorans DSM
          12260]
          Length = 136

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 7/56 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++ S +   SG+      + +I  NIAN  TTG       +++  + F+++++ S 
Sbjct: 1  MLRSLYSGVSGVKGHQTYLDVIGNNIANVNTTG-------FKKSNVLFQDLLYQSN 49


>gi|307719964|ref|YP_003891104.1| flagellar hook protein FlgE [Sulfurimonas autotrophica DSM 16294]
 gi|306978057|gb|ADN08092.1| flagellar hook protein FlgE [Sulfurimonas autotrophica DSM 16294]
          Length = 709

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     SGL      M + S NIAN  T G
Sbjct: 1  MLKSLFSGVSGLQSHQVAMDVESNNIANVNTVG 33



 Score = 34.1 bits (78), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++      +    R + AN +TI  S  ++ T + L
Sbjct: 667 EASNVDLSRALTQLIIIQRGFQANGKTITTSDQLLQTLIGL 707


>gi|226314925|ref|YP_002774821.1| flagellar hook-associated protein 1 [Brevibacillus brevis NBRC
          100599]
 gi|226097875|dbj|BAH46317.1| flagellar hook-associated protein 1 [Brevibacillus brevis NBRC
          100599]
          Length = 495

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 9/81 (11%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG--------DTPGSDPYRRKTISFE 52
          M        ++  GL  Q + +     NI+NA T G              PY     S E
Sbjct: 1  MRSTFHGIEVSKRGLFAQQSALNTTGHNISNANTEGYSRQRVNMQATTGLPYVGMQASIE 60

Query: 53 EVMHGSGGVRVKKIGVDQSTF 73
            + G+ GV+   I   +  F
Sbjct: 61 PGLLGT-GVQATSIQRLREEF 80


>gi|254227980|ref|ZP_04921410.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
 gi|262396038|ref|YP_003287891.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
 gi|151939476|gb|EDN58304.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
 gi|262339632|gb|ACY53426.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
          Length = 120

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 9/50 (18%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--GSGGV 61
           L  +  R ++++ N+AN  T G       Y  K +SF  VM+   +GGV
Sbjct: 15 ALNFRVQRTKVLASNLANVDTPG-------YLAKDLSFTTVMNQVAAGGV 57


>gi|254455211|ref|ZP_05068645.1| flagellar basal body FlaE domain protein [Octadecabacter
          antarcticus 238]
 gi|198263495|gb|EDY87768.1| flagellar basal body FlaE domain protein [Octadecabacter
          antarcticus 238]
          Length = 267

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 7/53 (13%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          SG++     + ++S N+ANA TT        +R+ + SF ++  G+    V +
Sbjct: 7  SGMSTSMFEISVVSNNVANASTTA-------FRKSSASFSDLYSGASAETVSR 52


>gi|94263281|ref|ZP_01287097.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456364|gb|EAT06488.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 879

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ +    Y A  + I  S +M+ T LD +R
Sbjct: 839 SGVSLDEEMANLIKFQHAYTAAARMISMSDEMLVTLLDTVR 879


>gi|308063216|gb|ADO05103.1| flagellar basal-body rod protein [Helicobacter pylori Sat464]
          Length = 269

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 11 ANSGLAVQSARMQIISENIANART 34
          A   +  Q  R+ + S N+AN  T
Sbjct: 8  ATGAMVAQFNRLDLTSNNLANLNT 31


>gi|296282278|ref|ZP_06860276.1| flagellar basal-body rod protein FlgF [Citromicrobium
          bathyomarinum JL354]
          Length = 246

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
          MD LI +   A SG+     R + I+ N+AN  T G
Sbjct: 1  MDRLIYT---ALSGMQASMDRQRAIASNMANTDTLG 33


>gi|283833633|ref|ZP_06353374.1| flagellar basal-body rod protein FlgB [Citrobacter youngae ATCC
           29220]
 gi|291071316|gb|EFE09425.1| flagellar basal-body rod protein FlgB [Citrobacter youngae ATCC
           29220]
          Length = 138

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 40/128 (31%), Gaps = 29/128 (22%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--------HGSGGVRVKKI 66
           L  Q    +I++ NIANA T G       Y+ + + F   +          +GGV +   
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDLDFASELKKVMVRGREQTGGVSLTLT 68

Query: 67  GVDQSTFVEEFDPGH------PVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTI- 118
                       P        P   +  G      V++  E     + +  Y   L  + 
Sbjct: 69  SAQHIPAQTVSTPSTELLYRIPDQPSLDGN----TVDMDRERTQFADNSLKYQMGLTALG 124

Query: 119 KQSHDMMT 126
            Q   MM 
Sbjct: 125 GQIKGMMN 132


>gi|255025674|ref|ZP_05297660.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           J2-003]
          Length = 63

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 26  VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 63


>gi|238764393|ref|ZP_04625343.1| Flagellar basal-body rod protein flgF [Yersinia kristensenii ATCC
           33638]
 gi|238697419|gb|EEP90186.1| Flagellar basal-body rod protein flgF [Yersinia kristensenii ATCC
           33638]
          Length = 251

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKAVEAMTDMIANARSFEMQMKVIHSVDENEQRANQLL 248


>gi|88858137|ref|ZP_01132779.1| flagellar hook-associated protein [Pseudoalteromonas tunicata D2]
 gi|88819754|gb|EAR29567.1| flagellar hook-associated protein [Pseudoalteromonas tunicata D2]
          Length = 681

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-SFEEVMHGSGGV-- 61
                  SGLA     +     NIAN  TTG       Y R+T+     V    GGV  
Sbjct: 3  FGILGTGVSGLAAAQKGLDTTGHNIANVNTTG-------YNRQTVEQISTVGIPFGGVFL 55

Query: 62 ----RVKKIGV 68
              +V  I  
Sbjct: 56 GNGTQVSSISR 66


>gi|107023946|ref|YP_622273.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia AU
           1054]
 gi|116691033|ref|YP_836656.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
           HI2424]
 gi|170734367|ref|YP_001766314.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
           MC0-3]
 gi|105894135|gb|ABF77300.1| Flagellar hook-associated protein [Burkholderia cenocepacia AU
           1054]
 gi|116649122|gb|ABK09763.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
           HI2424]
 gi|169817609|gb|ACA92192.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
           MC0-3]
          Length = 643

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 603 SGVNQNEEAANLMQYQQLYQANAKVIQTASTLFQTVLGL 641


>gi|328947991|ref|YP_004365328.1| flagellar basal-body rod protein FlgB [Treponema succinifaciens
          DSM 2489]
 gi|328448315|gb|AEB14031.1| flagellar basal-body rod protein FlgB [Treponema succinifaciens
          DSM 2489]
          Length = 139

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    S  + +  L V+S R Q+ + NIAN+           ++R++++FE  +  +
Sbjct: 1  MNSFSNSVDLLHRALDVESLRYQVTANNIANSEVAN-------FKRQSVNFESELKKA 51


>gi|317052364|ref|YP_004113480.1| flagellar basal-body rod protein FlgB [Desulfurispirillum indicum
          S5]
 gi|316947448|gb|ADU66924.1| flagellar basal-body rod protein FlgB [Desulfurispirillum indicum
          S5]
          Length = 141

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 7/51 (13%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           ++  + + V+S    +I+ N+ANA T         Y+ K + FE+ +  +
Sbjct: 12 INLLATSMTVRSKNQDVIATNVANAETPN-------YKAKELVFEDQLREA 55


>gi|207110390|ref|ZP_03244552.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1]
          Length = 107

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 14/40 (35%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            ++  NVN      ++    R Y  N +      DM+   
Sbjct: 68  YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEA 107


>gi|170694389|ref|ZP_02885543.1| flagellar basal-body rod protein FlgB [Burkholderia graminis
          C4D1M]
 gi|170140812|gb|EDT08986.1| flagellar basal-body rod protein FlgB [Burkholderia graminis
          C4D1M]
          Length = 163

 Score = 35.3 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       Y+ + + F   + G+
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YKARDVDFASSLAGA 52


>gi|312962296|ref|ZP_07776787.1| flagellar basal-body rod protein F [Pseudomonas fluorescens WH6]
 gi|311283223|gb|EFQ61813.1| flagellar basal-body rod protein F [Pseudomonas fluorescens WH6]
          Length = 246

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 19/37 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           SG ++  NVN + E   +   ++ +  +++ +  + +
Sbjct: 198 SGFLQASNVNAVEEMTAVLALSKQFELHIKMMNSAKE 234


>gi|255522321|ref|ZP_05389558.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J1-175]
          Length = 107

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ VE   + +  R+  A+   + 
Sbjct: 58  QNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVN 91


>gi|238788316|ref|ZP_04632110.1| Flagellar basal-body rod protein flgF [Yersinia frederiksenii ATCC
           33641]
 gi|238723562|gb|EEQ15208.1| Flagellar basal-body rod protein flgF [Yersinia frederiksenii ATCC
           33641]
          Length = 251

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKAVEAMTDMIANARSFEMQMKVIHSVDENEQRANQLL 248


>gi|206558976|ref|YP_002229736.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
           J2315]
 gi|198035013|emb|CAR50885.1| flagellar hook-associated protein 1 (HAP1) [Burkholderia
           cenocepacia J2315]
          Length = 643

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 603 SGVNQNEEAANLMQYQQLYQANAKVIQTASTLFQTVLGL 641


>gi|188586845|ref|YP_001918390.1| flagellar hook-associated protein FlgK [Natranaerobius
          thermophilus JW/NM-WN-LF]
 gi|179351532|gb|ACB85802.1| flagellar hook-associated protein FlgK [Natranaerobius
          thermophilus JW/NM-WN-LF]
          Length = 568

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 29/84 (34%), Gaps = 13/84 (15%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT------PGSDPYRRKTISFEEV 54
          M         A   L  Q   +     NIANA   G T        + PY   T+  + +
Sbjct: 1  MRSTFHGMETAKRALFAQRNALDTTGHNIANAERDGYTRQKAHMSATSPY---TMPAQNM 57

Query: 55 MHGSG----GVRVKKIGVDQSTFV 74
             +G    GV V+ +   +  F+
Sbjct: 58 PGTAGQIGTGVEVESVERMRDDFI 81


>gi|114570488|ref|YP_757168.1| flagellar basal-body rod protein FlgB [Maricaulis maris MCS10]
 gi|114340950|gb|ABI66230.1| flagellar basal-body rod protein FlgB [Maricaulis maris MCS10]
          Length = 150

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/25 (56%), Positives = 18/25 (72%)

Query: 15 LAVQSARMQIISENIANARTTGDTP 39
          ++  S R Q+I+ENIANA T G TP
Sbjct: 16 MSFHSDRQQVIAENIANANTPGYTP 40


>gi|221215572|ref|ZP_03588535.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD1]
 gi|221164560|gb|EED97043.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD1]
          Length = 252

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)

Query: 80  GHPVANASGIV-------KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+P A+A   V       +  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 191 GNP-ADADPNVAVVPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249



 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISF 51
          MD LI       + +   S  +    I++ N+ANA TTG       YR   ++F
Sbjct: 1  MDRLIY------TAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNF 48


>gi|254251192|ref|ZP_04944510.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158]
 gi|124893801|gb|EAY67681.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158]
          Length = 252

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)

Query: 80  GHPVANASGIV-------KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+P A+A   V       +  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 191 GNP-ADADPNVVVVPNSLEGSNVNPVNAMVSMIDNARAFQLQSKLIETADQNEQSANQLL 249



 Score = 34.5 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISF 51
          MD LI       + +   S  +    I++ N+ANA TTG       YR   ++F
Sbjct: 1  MDRLIY------TAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNF 48


>gi|309779444|ref|ZP_07674205.1| flagellar basal-body rod protein FlgB [Ralstonia sp. 5_7_47FAA]
 gi|308921685|gb|EFP67321.1| flagellar basal-body rod protein FlgB [Ralstonia sp. 5_7_47FAA]
          Length = 151

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           L ++S R QI++ NIANA T         Y+ +   F+  +  + G +
Sbjct: 15 ALHLRSQRHQILASNIANADTPN-------YKARDFDFQSALQKAVGQQ 56


>gi|299822258|ref|ZP_07054144.1| flagellar basal body rod protein FlgG [Listeria grayi DSM 20601]
 gi|299815787|gb|EFI83025.1| flagellar basal body rod protein FlgG [Listeria grayi DSM 20601]
          Length = 259

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLRD 134
           P       +G+++  NV++  E  ++ +  R+  A+   IK    +    +  LLR+
Sbjct: 203 PAGRALIQNGVLESSNVDMSTEMVELMDNQRMVQASSNIIKMFDTVYDKESSGLLRN 259


>gi|188991640|ref|YP_001903650.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733400|emb|CAP51601.1| Flagellar basal-body rod protein flgF [Xanthomonas campestris pv.
           campestris]
          Length = 251

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG+++  NV+      +M +  R +   ++ IK   D   +   ++R
Sbjct: 202 SGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSMMR 248


>gi|161526185|ref|YP_001581197.1| flagellar basal body rod protein FlgF [Burkholderia multivorans
           ATCC 17616]
 gi|189349099|ref|YP_001944727.1| flagellar basal body rod protein FlgF [Burkholderia multivorans
           ATCC 17616]
 gi|160343614|gb|ABX16700.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           ATCC 17616]
 gi|189333121|dbj|BAG42191.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
           17616]
          Length = 252

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)

Query: 80  GHPVANASGIV-------KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+P A+A   V       +  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 191 GNP-ADADPNVAVVPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249



 Score = 34.5 bits (79), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISF 51
          MD LI       + +   S  +    I++ N+ANA TTG       YR   ++F
Sbjct: 1  MDRLIY------TAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNF 48


>gi|83312926|ref|YP_423190.1| flagellar hook-associated protein [Magnetospirillum magneticum
           AMB-1]
 gi|82947767|dbj|BAE52631.1| Flagellar hook-associated protein [Magnetospirillum magneticum
           AMB-1]
          Length = 858

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A+M    + Y A+ + I    +M+ T +++++
Sbjct: 818 SGVNLDEEVANMINFQQAYSASAKVISTLQEMLDTLVNIVK 858


>gi|295688393|ref|YP_003592086.1| hypothetical protein Cseg_0963 [Caulobacter segnis ATCC 21756]
 gi|295430296|gb|ADG09468.1| protein of unknown function DUF1078 domain protein [Caulobacter
           segnis ATCC 21756]
          Length = 79

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 16/38 (42%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +V+   E  +       + AN + ++ +  M    L++
Sbjct: 40  DVDYGKERVEQISAQYDFRANAKVVQTADQMTGALLNI 77


>gi|254699458|ref|ZP_05161286.1| flagellar basal body rod protein FlgB [Brucella suis bv. 5 str.
           513]
 gi|261749909|ref|ZP_05993618.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 5 str.
           513]
 gi|261739662|gb|EEY27588.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 5 str.
           513]
          Length = 126

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 30/125 (24%)

Query: 17  VQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSG-----------GVR 62
            Q  S R   ++ N+ANA T    P    +R + +  F +V+  +               
Sbjct: 14  AQWLSVRQATVAGNVANANT----PD---FRARDVQPFADVLDKTQLTMTATSPLHLEAE 66

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
              I   +    +  +  H     SG      V+V  E     E  R Y  N   +K  H
Sbjct: 67  ADGIAATRLRSDDVTEQTH-----SGN----TVDVEQEMMKAGEIAREYSLNTSIVKAFH 117

Query: 123 DMMTT 127
            MM +
Sbjct: 118 RMMLS 122


>gi|73539447|ref|YP_299814.1| flagellar basal body rod protein FlgB [Ralstonia eutropha JMP134]
 gi|72122784|gb|AAZ64970.1| Flagellar basal-body rod protein FlgB [Ralstonia eutropha JMP134]
          Length = 135

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 50/141 (35%), Gaps = 19/141 (13%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           +D L ++       L++++ R  +I+ NIA+A T G       Y+ +   F   +  +  
Sbjct: 2   IDRLDSALRFQQEALSLRTQRQSVIASNIAHADTPG-------YKARDFDFSSTLAQTME 54

Query: 59  GGVRVKKIGVDQSTFV--EEFDPGHPVANASGI-------VKYPNVNVLVETADMRETNR 109
            G R   + +  ++        P    A+ +         V    V +  E     + + 
Sbjct: 55  RGRRPDGVSLSTTSVRHLPAQAPTRDDADLA-YRIPLQSSVDGNTVEMDTERVAFADNSV 113

Query: 110 LYMANLQTIKQSHDMMTTTLD 130
            + +NL  +      M   + 
Sbjct: 114 HFESNLTVVSSKIKTMLAAIQ 134


>gi|323490139|ref|ZP_08095359.1| flagellar basal body rod protein FlgB [Planococcus donghaensis
          MPA1U2]
 gi|323396187|gb|EGA89013.1| flagellar basal body rod protein FlgB [Planococcus donghaensis
          MPA1U2]
          Length = 133

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    S       L+  + + ++ S NIAN  T         Y+ K + F+  ++ +
Sbjct: 1  MNIFPKSIESMEQALSAATLKQRVHSANIANVDTAN-------YKSKKVDFQAALNTA 51


>gi|260779346|ref|ZP_05888238.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605510|gb|EEX31805.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 243

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           VD + F  E D    +A     ++  NV+ + E  ++    R +   ++ +K +  +   
Sbjct: 180 VDGNPF--EVDQTVQLAPE--HIEGSNVSAIDELLNVMSLTRNFEMQVRMMKTAETLAQA 235


>gi|254510289|ref|ZP_05122356.1| flagellar basal-body rod protein; FlgB [Rhodobacteraceae bacterium
           KLH11]
 gi|221534000|gb|EEE36988.1| flagellar basal-body rod protein; FlgB [Rhodobacteraceae bacterium
           KLH11]
          Length = 115

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 20/118 (16%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTI-----SFEEVMHGSGGVRVKK---IGVDQS 71
            R  +IS N+ANA T G       Y+ K I      FE    G      ++    G+  +
Sbjct: 7   QRQAVISRNMANADTPG-------YQPKDITPFQNVFENSAAGGAMTATRQGHLHGISDA 59

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
               E+   HP +  +G      V++  E     +  R +   L   + S  ++ T+L
Sbjct: 60  RHWAEYK-AHPASEPNGN----GVSLEEEMLKAVDVKRQHDRALAIYRSSIGILRTSL 112


>gi|221199740|ref|ZP_03572783.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD2M]
 gi|221208655|ref|ZP_03581655.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD2]
 gi|221171466|gb|EEE03913.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD2]
 gi|221179979|gb|EEE12383.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD2M]
          Length = 252

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)

Query: 80  GHPVANASGIV-------KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+P A+A   V       +  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 191 GNP-ADADPNVAVVPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249



 Score = 34.5 bits (79), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISF 51
          MD LI       + +   S  +    I++ N+ANA TTG       YR   ++F
Sbjct: 1  MDRLIY------TAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNF 48


>gi|254466371|ref|ZP_05079782.1| flagellar basal-body rod protein FlgF [Rhodobacterales bacterium
          Y4I]
 gi|206687279|gb|EDZ47761.1| flagellar basal-body rod protein FlgF [Rhodobacterales bacterium
          Y4I]
          Length = 238

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 7/39 (17%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M++I+ NIAN+ TTG       YR++ + F E +  S G
Sbjct: 19 MRVIANNIANSATTG-------YRQEGLIFSEFVQSSPG 50



 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            G ++  NVN + E + M +  R Y      ++   + +   +
Sbjct: 190 QGFLEGSNVNAISEVSRMIDVQRAYEMGQSFLQTEDERIRNAI 232


>gi|110677662|ref|YP_680669.1| flagellar basal body rod protein FlgF [Roseobacter denitrificans
           OCh 114]
 gi|109453778|gb|ABG29983.1| flagellar basal-body rod protein FlgF, putative [Roseobacter
           denitrificans OCh 114]
          Length = 237

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 17/42 (40%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            V+  NVN +++   M E  R Y      ++   + +   + 
Sbjct: 192 FVENSNVNPILQLTRMIEVQRAYELGASFVEAEDERVRQAMR 233


>gi|134297197|ref|YP_001120932.1| flagellar basal body rod protein FlgF [Burkholderia vietnamiensis
           G4]
 gi|134140354|gb|ABO56097.1| flagellar basal-body rod protein FlgF [Burkholderia vietnamiensis
           G4]
          Length = 252

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)

Query: 80  GHPVANASGIV-------KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+P A+A   V       +  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 191 GNP-ADADPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249


>gi|330961205|gb|EGH61465.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          maculicola str. ES4326]
          Length = 686

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--SFEEVMHGSGGVR 62
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +  +    +    GV 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVLTTASAQIALGQGVG 53

Query: 63 VKKIGVDQSTFVEEFD 78
              G   S     ++
Sbjct: 54 YLGTGTTLSDVRRIYN 69


>gi|313650471|gb|EFS14878.1| flagellar basal-body rod protein flgF [Shigella flexneri 2a str.
           2457T]
 gi|323165586|gb|EFZ51373.1| flagellar basal-body rod protein flgF [Shigella sonnei 53G]
 gi|332759653|gb|EGJ89958.1| flagellar basal-body rod protein flgF [Shigella flexneri 2747-71]
 gi|332761423|gb|EGJ91707.1| flagellar basal-body rod protein flgF [Shigella flexneri K-671]
 gi|333004887|gb|EGK24407.1| flagellar basal-body rod protein flgF [Shigella flexneri VA-6]
 gi|333005400|gb|EGK24918.1| flagellar basal-body rod protein flgF [Shigella flexneri K-218]
 gi|333019423|gb|EGK38706.1| flagellar basal-body rod protein flgF [Shigella flexneri K-304]
          Length = 132

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 84  SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 129


>gi|307731366|ref|YP_003908590.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1003]
 gi|307585901|gb|ADN59299.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1003]
          Length = 163

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       Y+ + + F   + G+
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YKARDVDFASSLAGA 52


>gi|325529015|gb|EGD06028.1| flagellar basal body rod protein FlgF [Burkholderia sp. TJI49]
          Length = 252

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)

Query: 80  GHPVANASGIV-------KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+P A+A   V       +  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 191 GNP-ADADPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249



 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISF 51
          MD LI       + +   S  +    I++ N+ANA TTG       YR   ++F
Sbjct: 1  MDRLIY------TAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNF 48


>gi|119503650|ref|ZP_01625733.1| flagellar hook-associated protein [marine gamma proteobacterium
          HTCC2080]
 gi|119460712|gb|EAW41804.1| flagellar hook-associated protein [marine gamma proteobacterium
          HTCC2080]
          Length = 556

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 16/73 (21%)

Query: 4  LIASAHIANSGLAV-QSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----- 57
          +  +  I  + L+  Q A +    +NIAN  T G       Y R+++S            
Sbjct: 1  MANTLGIGTTALSALQRA-ISTTGQNIANVNTEG-------YSRQSVSLSARPAQDIGAG 52

Query: 58 --SGGVRVKKIGV 68
              GV+V  I  
Sbjct: 53 YLGSGVQVTSIDR 65


>gi|78776765|ref|YP_393080.1| flagellar hook-associated protein FlgK [Sulfurimonas
          denitrificans DSM 1251]
 gi|78497305|gb|ABB43845.1| Flagellar hook-associated protein [Sulfurimonas denitrificans DSM
          1251]
          Length = 628

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          +  S  I  SGL+   A +   S NI NA + G       Y R+ +     
Sbjct: 5  IFNSLSIGYSGLSAAQAGVSTTSHNITNAESEG-------YTRQRVVTAAA 48


>gi|293395584|ref|ZP_06639867.1| flagellar basal-body rod protein FlgF [Serratia odorifera DSM 4582]
 gi|291421903|gb|EFE95149.1| flagellar basal-body rod protein FlgF [Serratia odorifera DSM 4582]
          Length = 251

 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVIEGSNVKPMETMVDMIANARRFEMQMKVIHSVDENEQRANSLL 248


>gi|242763293|ref|XP_002340547.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
 gi|218723743|gb|EED23160.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
          Length = 1684

 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 12/53 (22%)

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA---------SGIVKYPNVN 96
           +   GS  +RV+ +  D++   +++DP HP A            G +  PN++
Sbjct: 823 QGPSGSKVIRVRDVVFDET---KKYDPDHPFAKEIVKEGITKYVGNIDIPNID 872


>gi|66768033|ref|YP_242795.1| hypothetical protein XC_1709 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188991158|ref|YP_001903168.1| hypothetical protein xccb100_1762 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|66573365|gb|AAY48775.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732918|emb|CAP51114.1| Conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 98

 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 31/128 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+ V + R Q+ + N+A            P  R+ ++      G     V 
Sbjct: 1   MSISTIASSGMQVAALRQQVAASNVA-----RQPVEGSP--RQAVAASTQAGGGVTASVV 53

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
               D S                         +  +          + AN   +++S + 
Sbjct: 54  DAAADPSA------------------------LATDLVAGLSARNDFQANANVLRRSDEA 89

Query: 125 MTTTLDLL 132
           + + LD+L
Sbjct: 90  LGSLLDVL 97


>gi|295690699|ref|YP_003594392.1| flagellar basal-body rod protein Flgb [Caulobacter segnis ATCC
           21756]
 gi|295432602|gb|ADG11774.1| flagellar basal-body rod protein FlgB [Caulobacter segnis ATCC
           21756]
          Length = 150

 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 22/127 (17%)

Query: 18  QSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-------GGV-----RVKK 65
           +  R+  +++N+ANA T G  P       K  SF+  +          GGV      V+ 
Sbjct: 24  ERQRL--VAQNVANADTAGYRPQDL----KQFSFQASLMNQTSGAVYRGGVAAPTNGVRM 77

Query: 66  IGVDQSTFVEEFDPGH----PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           I    S       P        A++   +    V++  +   M      Y A +   ++S
Sbjct: 78  IATSASHLAPSNAPSAWRATAGADSETTLDGNAVSLEDQMIKMTNARMNYDAAISFYQKS 137

Query: 122 HDMMTTT 128
             M+   
Sbjct: 138 MTMLRMA 144


>gi|317047692|ref|YP_004115340.1| flagellar basal-body rod protein FlgF [Pantoea sp. At-9b]
 gi|316949309|gb|ADU68784.1| flagellar basal-body rod protein FlgF [Pantoea sp. At-9b]
          Length = 252

 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKPVETMVDMIANARRFEMQMKVISNVDENEQKANQLL 248


>gi|167626156|ref|YP_001676450.1| flagellar basal-body rod protein FlgF [Shewanella halifaxensis
           HAW-EB4]
 gi|167356178|gb|ABZ78791.1| flagellar basal-body rod protein FlgF [Shewanella halifaxensis
           HAW-EB4]
          Length = 244

 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           +SG ++  NV  + E     + +R +   ++ +K +  +      LLRD
Sbjct: 195 SSGFLEASNVQAVGELIAAMDLSRQFEVQVKLMKSAEKLAEAGNRLLRD 243



 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 5/37 (13%)

Query: 1  MDYLI-ASAHIANSGLAVQSARMQIISENIANARTTG 36
          MD +I  +A  A   +  Q+ R    + N+ANA TTG
Sbjct: 1  MDRMIYTAAKGAARVMEAQAIR----ANNLANADTTG 33


>gi|152997576|ref|YP_001342411.1| flagellar hook-associated protein FlgK [Marinomonas sp. MWYL1]
 gi|150838500|gb|ABR72476.1| flagellar hook-associated protein FlgK [Marinomonas sp. MWYL1]
          Length = 658

 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E  ++ +  + Y A+ Q +  +     T L ++R
Sbjct: 616 RLSAVSLDEEAVNLMKYQQSYSASAQVVTAARTTFETLLGIMR 658


>gi|94265700|ref|ZP_01289439.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93453786|gb|EAT04158.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 875

 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ +    Y A  + I  S +M+ T LD +R
Sbjct: 835 SGVSLDEEMANLIKFQHAYTAAARMISMSDEMLVTLLDTVR 875


>gi|222084886|ref|YP_002543415.1| flagellar hook-associated protein [Agrobacterium radiobacter K84]
 gi|221722334|gb|ACM25490.1| flagellar hook-associated protein [Agrobacterium radiobacter K84]
          Length = 491

 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 91  KYPN---VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            Y N   VN+  E   M +  + Y A  + +   ++M+ + LD+
Sbjct: 446 AYSNETGVNLDEELTLMMDIEQSYKAGTKILNAVNEMLQSVLDI 489


>gi|91785637|ref|YP_560843.1| flagellar basal body rod protein FlgB [Burkholderia xenovorans
          LB400]
 gi|91689591|gb|ABE32791.1| Flagellar basal-body rod protein FlgB [Burkholderia xenovorans
          LB400]
          Length = 164

 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       Y+ + + F   + G+
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YKARDVDFASSLAGA 52


>gi|332305621|ref|YP_004433472.1| flagellar hook-associated protein FlgK [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172950|gb|AEE22204.1| flagellar hook-associated protein FlgK [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 709

 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 44/129 (34%), Gaps = 13/129 (10%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK-KIG 67
            IA SG+   +  +     NIAN  T G       Y R+  SF   + G  G     ++ 
Sbjct: 9   SIARSGVEASNQLLSTTGNNIANVNTDG-------YVRERTSFVAQLTGGVGQYTTERVM 61

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNV--NVLVETADMRETNRL-YMANLQTIKQS-HD 123
              +      D  + +A          V  NV    A+    +   + A+LQT      +
Sbjct: 62  NTFAQNQLRRDTTN-LAEHEAYWTKTAVLDNVFASEANSISASMSRFFASLQTANDDPTN 120

Query: 124 MMTTTLDLL 132
           M    L L 
Sbjct: 121 MSARQLVLG 129


>gi|171321839|ref|ZP_02910740.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
          MEX-5]
 gi|171092877|gb|EDT38129.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
          MEX-5]
          Length = 252

 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISF 51
          MD LI       + +   S  +    +++ N+ANA TTG       YR   ++F
Sbjct: 1  MDRLIY------TAMTGASQSLDQQAVVANNLANASTTGFRAQLATYRAVPMNF 48



 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 16/42 (38%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 208 EGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249


>gi|238752861|ref|ZP_04614326.1| Flagellar hook-associated protein [Yersinia rohdei ATCC 43380]
 gi|238708900|gb|EEQ01153.1| Flagellar hook-associated protein [Yersinia rohdei ATCC 43380]
          Length = 452

 Score = 35.3 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+   E  ++ E  R+Y +N++ +     +    L L
Sbjct: 415 VDKDEEAINLMEYQRVYQSNIKVVSTGDQLFRDLLAL 451


>gi|237731004|ref|ZP_04561485.1| flagellar basal body rod protein FlgB [Citrobacter sp. 30_2]
 gi|226906543|gb|EEH92461.1| flagellar basal body rod protein FlgB [Citrobacter sp. 30_2]
          Length = 138

 Score = 35.3 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 40/128 (31%), Gaps = 29/128 (22%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--------SGGVRVKKI 66
           L  Q    +I++ NIANA T G       Y+ + + F   +          +GGV +   
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDLDFASELKKVMVRGREETGGVSLTLT 68

Query: 67  GVDQSTFVEEFDPGH------PVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTI- 118
                       P        P   +  G      V++  E     + +  Y   L  + 
Sbjct: 69  SAQHIPAQTVSAPSTELLYRIPDQPSLDGN----TVDMDRERTQFADNSLKYQMGLTALG 124

Query: 119 KQSHDMMT 126
            Q   MM 
Sbjct: 125 GQIKGMMN 132


>gi|304397205|ref|ZP_07379084.1| flagellar basal-body rod protein FlgF [Pantoea sp. aB]
 gi|304355354|gb|EFM19722.1| flagellar basal-body rod protein FlgF [Pantoea sp. aB]
          Length = 251

 Score = 35.3 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKPVETMVDMIANARRFEMQMKVITNVDENEQKANQLL 248


>gi|187778745|ref|ZP_02995218.1| hypothetical protein CLOSPO_02340 [Clostridium sporogenes ATCC
          15579]
 gi|187772370|gb|EDU36172.1| hypothetical protein CLOSPO_02340 [Clostridium sporogenes ATCC
          15579]
          Length = 133

 Score = 35.3 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 7/44 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +   S R + IS NIAN  T G       Y+R  ++FEE +  +
Sbjct: 20 MDASSYRGRAISNNIANYNTPG-------YKRHYVTFEETLKDN 56


>gi|165925081|ref|ZP_02220913.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939053|ref|ZP_02227605.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008950|ref|ZP_02229848.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|167418761|ref|ZP_02310514.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167466336|ref|ZP_02331040.1| flagellar basal body rod protein FlgF [Yersinia pestis FV-1]
 gi|229840624|ref|ZP_04460783.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842825|ref|ZP_04462977.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|294502790|ref|YP_003566852.1| hypothetical protein YPZ3_0680 [Yersinia pestis Z176003]
 gi|165913009|gb|EDR31634.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923281|gb|EDR40432.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992289|gb|EDR44590.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166962755|gb|EDR58776.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|229690092|gb|EEO82149.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696990|gb|EEO87037.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|262360822|gb|ACY57543.1| hypothetical protein YPD4_0634 [Yersinia pestis D106004]
 gi|262364767|gb|ACY61324.1| hypothetical protein YPD8_0634 [Yersinia pestis D182038]
 gi|294353249|gb|ADE63590.1| hypothetical protein YPZ3_0680 [Yersinia pestis Z176003]
          Length = 197

 Score = 35.3 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV+ + E       +R + A ++ +K + D+      ++R
Sbjct: 155 SNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMIR 195


>gi|254445805|ref|ZP_05059281.1| flagellar hook-associated protein FlgK [Verrucomicrobiae bacterium
           DG1235]
 gi|198260113|gb|EDY84421.1| flagellar hook-associated protein FlgK [Verrucomicrobiae bacterium
           DG1235]
          Length = 486

 Score = 35.3 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 16/33 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             V++  E  DM +  R + A  + I+   +M+
Sbjct: 446 SGVSIDEEMTDMMKFQRAFQATGKLIQTIDEML 478


>gi|121601960|ref|YP_989403.1| flagellar basal body rod protein FlgB [Bartonella bacilliformis
           KC583]
 gi|120614137|gb|ABM44738.1| flagellar basal-body rod protein FlgB [Bartonella bacilliformis
           KC583]
          Length = 128

 Score = 35.3 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 14/117 (11%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSG-GVRVKKIGV-DQSTFVE 75
           S R + ++ N+ANA T G       Y+ + +  F +++      ++V  +   D +    
Sbjct: 18  SVRQKAVASNVANANTPG-------YQARDVQNFTDIVQNKAISMKVTHVQHMDLTENGM 70

Query: 76  EFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           E     P  + +G V +   NVN+  E +      R    N   +K  H M   T+ 
Sbjct: 71  EAQVIRP--DNAGGVTHSGNNVNLEEEMSKGAAIGREMSLNTAIVKAFHRMTMLTVR 125


>gi|219684621|ref|ZP_03539564.1| flagellar basal-body rod protein FlgB [Borrelia garinii PBr]
 gi|219671983|gb|EED29037.1| flagellar basal-body rod protein FlgB [Borrelia garinii PBr]
          Length = 135

 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    S   ++  L V S R  +IS+NIAN  T         ++R  ISFE  +  +
Sbjct: 1  MNDFERSIDFSHRYLDVLSLRQSVISDNIANVDTPN-------FKRSKISFESELEKA 51


>gi|320107049|ref|YP_004182639.1| flagellar hook-associated protein FlgK [Terriglobus saanensis
           SP1PR4]
 gi|319925570|gb|ADV82645.1| flagellar hook-associated protein FlgK [Terriglobus saanensis
           SP1PR4]
          Length = 467

 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               V++  E +++ E  R Y A  +      +M  + ++L 
Sbjct: 420 ALSGVSLDEEASNLTEYQRSYQAAAKVFSIVDEMFASAINLG 461


>gi|269796409|ref|YP_003315864.1| flagellar hook-associated protein FlgK [Sanguibacter keddieii DSM
          10542]
 gi|269098594|gb|ACZ23030.1| flagellar hook-associated protein FlgK [Sanguibacter keddieii DSM
          10542]
          Length = 475

 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 7/55 (12%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           +    A S L  Q   +++  +N+AN  T G       Y R+ +  + V  G G
Sbjct: 4  FSGLSTALSSLITQRQALEVAGQNLANINTPG-------YTRQRVDMQSVSAGQG 51


>gi|241589854|ref|YP_002979879.1| protein of unknown function DUF1643 [Ralstonia pickettii 12D]
 gi|240868566|gb|ACS66225.1| protein of unknown function DUF1643 [Ralstonia pickettii 12D]
          Length = 182

 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRV---KKIGVDQSTFVEEFDPGHPVANAS 87
           +T D   +DP  R+ + F   +  S  V V     +  D +   +  DP  P+A+ +
Sbjct: 47  STADAIDNDPTARRGVGFANALGASDLVIVNAATGVATDANELAQMEDPIGPMADEA 103


>gi|261339377|ref|ZP_05967235.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus
           ATCC 35316]
 gi|288318178|gb|EFC57116.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus
           ATCC 35316]
          Length = 251

 Score = 35.3 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM  + R +   ++ I    +       LL
Sbjct: 203 SGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDENANKANQLL 248


>gi|2494517|sp|P70910|FLGB_BORHE RecName: Full=Flagellar basal-body rod protein flgB
 gi|1621620|gb|AAB51473.1| flagellar rod protein FlgB [Borrelia hermsii]
          Length = 135

 Score = 34.9 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    S  +A+  L V S R  +I++NIAN  T         ++R  ++FE  +  +
Sbjct: 1  MNIFEMSVDLAHRYLDVLSLRQSVIADNIANVDTPN-------FKRSKVTFEAELERA 51


>gi|257095358|ref|YP_003168999.1| flagellar basal-body rod protein FlgF [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047882|gb|ACV37070.1| flagellar basal-body rod protein FlgF [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 249

 Score = 34.9 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 15/42 (35%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +     M    R +   ++ ++ +         LL
Sbjct: 204 EGSNVNSVDAMVRMISLARQFEMQIKMLQTADGNARAATQLL 245


>gi|300954383|ref|ZP_07166837.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 175-1]
 gi|300318619|gb|EFJ68403.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 175-1]
          Length = 251

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG ++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 203 SGGLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|197285504|ref|YP_002151376.1| flagellar hook-associated protein 1 [Proteus mirabilis HI4320]
 gi|194682991|emb|CAR43432.1| flagellar hook-associated protein 1 [Proteus mirabilis HI4320]
          Length = 547

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 14/73 (19%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---VMHGSG----G 60
           + A SGL    A M  IS NIAN +        + Y R+   F E    M  +G    G
Sbjct: 6  INTAMSGLNAAQAAMSTISNNIANQKV-------NWYNRQMTVFNENGGTMTSNGYIGNG 58

Query: 61 VRVKKIGVDQSTF 73
          V V +I  + + F
Sbjct: 59 VNVSRIHREYNEF 71


>gi|126653433|ref|ZP_01725529.1| flagellar basal-body rod protein [Bacillus sp. B14905]
 gi|126589789|gb|EAZ83922.1| flagellar basal-body rod protein [Bacillus sp. B14905]
          Length = 67

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +    +   +G+  Q  R +++S N+ANA T G        R    SF +++  S G
Sbjct: 1  MFKGFYTVATGMITQQRRTELLSNNLANANTPGFKADQSTIR----SFPDMLMSSIG 53


>gi|83595981|gb|ABC25341.1| flagellar hook associated protein [uncultured marine bacterium
          Ant24C4]
          Length = 478

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 11/74 (14%)

Query: 4  LIASAHIANSGLAVQSARM-QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          + ++ + A  GL+  SARM +++S N++N      T G   Y R+ ++    +   GGV 
Sbjct: 3  ISSAFNNATGGLSA-SARMAEVVSSNLSN----SLTEG---YGRREVNLSSGL--LGGVV 52

Query: 63 VKKIGVDQSTFVEE 76
          +  I       +  
Sbjct: 53 LDGISRVVDPGILR 66


>gi|292487936|ref|YP_003530811.1| flagellar basal-body rod protein FlgB [Erwinia amylovora
          CFBP1430]
 gi|292899155|ref|YP_003538524.1| flagellar basal-body rod protein FlgB [Erwinia amylovora ATCC
          49946]
 gi|291199003|emb|CBJ46114.1| flagellar basal-body rod protein FlgB [Erwinia amylovora ATCC
          49946]
 gi|291553358|emb|CBA20403.1| Flagellar basal-body rod protein flgB [Erwinia amylovora
          CFBP1430]
 gi|312172057|emb|CBX80314.1| Flagellar basal-body rod protein flgB [Erwinia amylovora ATCC
          BAA-2158]
          Length = 137

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 9/44 (20%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L  Q    +I++ NIANA T G       Y+ + I F   +  +
Sbjct: 18 LRAQRQ--EILASNIANADTPG-------YQARDIDFASQLTKA 52


>gi|237751806|ref|ZP_04582286.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879]
 gi|229373172|gb|EEO23563.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879]
          Length = 285

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 7/40 (17%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A  G+  Q  R+ +IS N+AN  T G       ++R  + 
Sbjct: 8  ATGGMITQFNRLDVISNNLANLNTNG-------FKRDDVV 40



 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNR 109
           A   G ++  NVN ++E   M ETNR
Sbjct: 232 AVTQGFLEKSNVNAVLEMTGMIETNR 257


>gi|126441590|ref|YP_001057329.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           668]
 gi|134283597|ref|ZP_01770296.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           305]
 gi|217425071|ref|ZP_03456567.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           576]
 gi|226199842|ref|ZP_03795393.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810468|ref|YP_002894919.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           MSHR346]
 gi|238562529|ref|ZP_00440322.2| flagellar hook-associated protein FlgK [Burkholderia mallei GB8
           horse 4]
 gi|251767452|ref|ZP_02267340.2| flagellar hook-associated protein 1 [Burkholderia mallei PRL-20]
 gi|254188065|ref|ZP_04894577.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254201902|ref|ZP_04908266.1| flagellar hook-associated protein 1 [Burkholderia mallei FMH]
 gi|254207237|ref|ZP_04913588.1| flagellar hook-associated protein 1 [Burkholderia mallei JHU]
 gi|254295821|ref|ZP_04963278.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           406e]
 gi|126221083|gb|ABN84589.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           668]
 gi|134245006|gb|EBA45101.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           305]
 gi|147747796|gb|EDK54872.1| flagellar hook-associated protein 1 [Burkholderia mallei FMH]
 gi|147752779|gb|EDK59845.1| flagellar hook-associated protein 1 [Burkholderia mallei JHU]
 gi|157805698|gb|EDO82868.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           406e]
 gi|157935745|gb|EDO91415.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           Pasteur 52237]
 gi|217392091|gb|EEC32117.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           576]
 gi|225928193|gb|EEH24229.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           Pakistan 9]
 gi|237506435|gb|ACQ98753.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           MSHR346]
 gi|238522496|gb|EEP85940.1| flagellar hook-associated protein FlgK [Burkholderia mallei GB8
           horse 4]
 gi|243062745|gb|EES44931.1| flagellar hook-associated protein 1 [Burkholderia mallei PRL-20]
          Length = 714

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ ++ +  T L L
Sbjct: 674 SGVNQNEEAANLMQYQQLYQANAKVIQTANSVFQTVLGL 712


>gi|78067836|ref|YP_370605.1| flagellar basal body rod protein FlgF [Burkholderia sp. 383]
 gi|77968581|gb|ABB09961.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 252

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)

Query: 80  GHPVANASGIV-------KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+P A+A   V       +  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 191 GNP-ADADPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249



 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISF 51
          MD LI       + +   S  +    I++ N+ANA TTG       YR   ++F
Sbjct: 1  MDRLIY------TAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNF 48


>gi|255018232|ref|ZP_05290358.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           F2-515]
          Length = 62

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 25  VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 62


>gi|254785368|ref|YP_003072797.1| flagellar basal-body rod protein FlgB [Teredinibacter turnerae
          T7901]
 gi|237687018|gb|ACR14282.1| flagellar basal-body rod protein FlgB [Teredinibacter turnerae
          T7901]
          Length = 134

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
             +  I  S + ++  R  +++ N+AN  T G       Y+ +  +F+E +   
Sbjct: 5  FEKALGIHESAMRLRGERAGMLASNLANTDTPG-------YKARDFNFQEALDRQ 52


>gi|238793999|ref|ZP_04637617.1| Flagellar basal-body rod protein flgF [Yersinia intermedia ATCC
           29909]
 gi|238726631|gb|EEQ18167.1| Flagellar basal-body rod protein flgF [Yersinia intermedia ATCC
           29909]
          Length = 251

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKAVEAMTDMIANARSFEMQMKVIHSVDENEQRANQLL 248


>gi|254182133|ref|ZP_04888730.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1655]
 gi|184212671|gb|EDU09714.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1655]
          Length = 714

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ ++ +  T L L
Sbjct: 674 SGVNQNEEAANLMQYQQLYQANAKVIQTANSVFQTVLGL 712


>gi|167835119|ref|ZP_02462002.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           MSMB43]
          Length = 667

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ ++ +  T L L
Sbjct: 627 SGVNQNEEAANLMQYQQLYQANAKVIQTANSVFQTVLGL 665


>gi|76809667|ref|YP_331888.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1710b]
 gi|167892419|ref|ZP_02479821.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           7894]
 gi|167909135|ref|ZP_02496226.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           112]
 gi|76579120|gb|ABA48595.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1710b]
          Length = 667

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ ++ +  T L L
Sbjct: 627 SGVNQNEEAANLMQYQQLYQANAKVIQTANSVFQTVLGL 665


>gi|53717921|ref|YP_106907.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           K96243]
 gi|53724572|ref|YP_104805.1| flagellar hook-associated protein FlgK [Burkholderia mallei ATCC
           23344]
 gi|121601252|ref|YP_994298.1| flagellar hook-associated protein FlgK [Burkholderia mallei SAVP1]
 gi|124385698|ref|YP_001028053.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC
           10229]
 gi|126448312|ref|YP_001082860.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC
           10247]
 gi|126451511|ref|YP_001064571.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1106a]
 gi|167717670|ref|ZP_02400906.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           DM98]
 gi|167736711|ref|ZP_02409485.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           14]
 gi|167813810|ref|ZP_02445490.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           91]
 gi|167822327|ref|ZP_02453798.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           9]
 gi|167843917|ref|ZP_02469425.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           B7210]
 gi|167900916|ref|ZP_02488121.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           NCTC 13177]
 gi|242314954|ref|ZP_04813970.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1106b]
 gi|254174885|ref|ZP_04881546.1| flagellar hook-associated protein 1 [Burkholderia mallei ATCC
           10399]
 gi|254197004|ref|ZP_04903428.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           S13]
 gi|254359739|ref|ZP_04976010.1| flagellar hook-associated protein 1 [Burkholderia mallei
           2002721280]
 gi|52208335|emb|CAH34268.1| putative flagellar hook-associated protein [Burkholderia
           pseudomallei K96243]
 gi|52427995|gb|AAU48588.1| flagellar hook-associated protein 1 [Burkholderia mallei ATCC
           23344]
 gi|121230062|gb|ABM52580.1| flagellar hook-associated protein 1 [Burkholderia mallei SAVP1]
 gi|124293718|gb|ABN02987.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC
           10229]
 gi|126225153|gb|ABN88693.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1106a]
 gi|126241182|gb|ABO04275.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC
           10247]
 gi|148028953|gb|EDK86885.1| flagellar hook-associated protein 1 [Burkholderia mallei
           2002721280]
 gi|160695930|gb|EDP85900.1| flagellar hook-associated protein 1 [Burkholderia mallei ATCC
           10399]
 gi|169653747|gb|EDS86440.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           S13]
 gi|242138193|gb|EES24595.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1106b]
          Length = 667

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ ++ +  T L L
Sbjct: 627 SGVNQNEEAANLMQYQQLYQANAKVIQTANSVFQTVLGL 665


>gi|260437430|ref|ZP_05791246.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus
          DSM 2876]
 gi|292810062|gb|EFF69267.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus
          DSM 2876]
          Length = 543

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 17/95 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
          M        I +SGL   +A +   + NI+N  T G T        K +S ++       
Sbjct: 1  MANTFFGLTIGSSGLFASNAAINTTAHNISNINTKGYT--------KQVSNQQAAESIRV 52

Query: 57 ----GSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
              G+ G     I +DQ      +D  +  AN +
Sbjct: 53 YQSYGTVGTGTAVISIDQLRSSY-YDTKYRHANTN 86


>gi|227355995|ref|ZP_03840387.1| flagellar hook-associated protein 1 [Proteus mirabilis ATCC
          29906]
 gi|227163983|gb|EEI48885.1| flagellar hook-associated protein 1 [Proteus mirabilis ATCC
          29906]
          Length = 547

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 14/73 (19%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---VMHGSG----G 60
           + A SGL    A M  IS NIAN +        + Y R+   F E    M  +G    G
Sbjct: 6  INTAMSGLNAAQAAMSTISNNIANQKV-------NWYNRQMTVFNENGGTMTSNGYIGNG 58

Query: 61 VRVKKIGVDQSTF 73
          V V +I  + + F
Sbjct: 59 VNVSRIHREYNEF 71


>gi|209521586|ref|ZP_03270284.1| flagellar basal-body rod protein FlgB [Burkholderia sp. H160]
 gi|209497969|gb|EDZ98126.1| flagellar basal-body rod protein FlgB [Burkholderia sp. H160]
          Length = 165

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           + V++ R +++S NIANA T G       Y+ + I F   + G+
Sbjct: 15 AMDVRAYRQELLSSNIANADTPG-------YKARDIDFASSLAGA 52


>gi|167917171|ref|ZP_02504262.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           BCC215]
          Length = 667

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ ++ +  T L L
Sbjct: 627 SGVNQNEEAANLMQYQQLYQANAKVIQTANSVFQTVLGL 665


>gi|162147445|ref|YP_001601906.1| flagellar hook protein flgE [Gluconacetobacter diazotrophicus PAl
          5]
 gi|209545555|ref|YP_002277784.1| hypothetical protein Gdia_3444 [Gluconacetobacter diazotrophicus
          PAl 5]
 gi|161786022|emb|CAP55604.1| putative flagellar hook protein flgE [Gluconacetobacter
          diazotrophicus PAl 5]
 gi|209533232|gb|ACI53169.1| protein of unknown function DUF1078 domain protein
          [Gluconacetobacter diazotrophicus PAl 5]
          Length = 569

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 7/67 (10%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            +   A SG+  QS     +S NIAN++T G       Y+ ++ SF++ + GS      
Sbjct: 4  FNALSTAVSGIDAQSTAFTNLSNNIANSQTVG-------YKAESTSFQDFVAGSLTSSTA 56

Query: 65 KIGVDQS 71
             +  S
Sbjct: 57 SSDISDS 63



 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 20/44 (45%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G V+    ++  + + +      Y AN + +  + D++  T+ +
Sbjct: 523 GYVESSTTDLTSDLSALIVDQEAYSANTKVVTTADDLLQATISM 566


>gi|167038179|ref|YP_001665757.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          pseudethanolicus ATCC 33223]
 gi|167039112|ref|YP_001662097.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
          X514]
 gi|300913298|ref|ZP_07130615.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
          X561]
 gi|307723688|ref|YP_003903439.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
          X513]
 gi|320116588|ref|YP_004186747.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          brockii subsp. finnii Ako-1]
 gi|166853352|gb|ABY91761.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
          X514]
 gi|166857013|gb|ABY95421.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          pseudethanolicus ATCC 33223]
 gi|300889983|gb|EFK85128.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
          X561]
 gi|307580749|gb|ADN54148.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
          X513]
 gi|319929679|gb|ADV80364.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          brockii subsp. finnii Ako-1]
          Length = 480

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 20/77 (25%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
               IA +GL V    + +   NIANA T G       Y R+ +    +   +      
Sbjct: 4  FQGLEIAKTGLFVSQKALDVTGHNIANANTPG-------YTRQVVDMASIAPPTTFGMYD 56

Query: 60 --------GVRVKKIGV 68
                  GV+++ I  
Sbjct: 57 QWGKAIGEGVKIQDIRQ 73


>gi|315453646|ref|YP_004073916.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC
           49179]
 gi|315132698|emb|CBY83326.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC
           49179]
          Length = 271

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNR 109
            G ++  NVN + E   + E NR
Sbjct: 221 QGFLEKSNVNAVREMTRLIEANR 243


>gi|218887610|ref|YP_002436931.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758564|gb|ACL09463.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 702

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A + +    Y A  + +  +  MM T L L
Sbjct: 662 SGVNLDEEMASLVKFQHAYKAAAKLVTTADQMMQTLLGL 700


>gi|121535557|ref|ZP_01667365.1| flagellar hook-associated protein FlgK [Thermosinus carboxydivorans
           Nor1]
 gi|121305885|gb|EAX46819.1| flagellar hook-associated protein FlgK [Thermosinus carboxydivorans
           Nor1]
          Length = 494

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           VN+  E  +M    + Y A  + +    +M+   ++
Sbjct: 452 VNMDEEMTNMIRYQQGYNAAARVVTAIDEMLDKLIN 487


>gi|83594184|ref|YP_427936.1| hypothetical protein Rru_A2852 [Rhodospirillum rubrum ATCC 11170]
 gi|83577098|gb|ABC23649.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 727

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 9/53 (16%)

Query: 13 SGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          SGL   Q   + ++S N+AN  T G       Y RK  + E V+    GV V+
Sbjct: 12 SGLQTAQKG-LDLVSHNLANINTPG-------YTRKIFNPESVVLNGSGVGVQ 56


>gi|326386931|ref|ZP_08208545.1| Flagellar basal-body rod FlgF [Novosphingobium nitrogenifigens
          DSM 19370]
 gi|326208611|gb|EGD59414.1| Flagellar basal-body rod FlgF [Novosphingobium nitrogenifigens
          DSM 19370]
          Length = 247

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 3/36 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
          MD LI +   A SG++    + ++I+ N+AN++TTG
Sbjct: 1  MDRLIYT---AYSGMSASMVQQRVIANNMANSQTTG 33


>gi|296157459|ref|ZP_06840294.1| flagellar basal-body rod protein FlgB [Burkholderia sp. Ch1-1]
 gi|295892231|gb|EFG72014.1| flagellar basal-body rod protein FlgB [Burkholderia sp. Ch1-1]
          Length = 164

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       Y+ + + F   + G+
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YKARDVDFASSLAGA 52


>gi|254508414|ref|ZP_05120534.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          16]
 gi|219548624|gb|EED25629.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          16]
          Length = 624

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 8/69 (11%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          + S L  Q   +     NI+NA T G       Y R+++     +    G     +GV  
Sbjct: 10 SQSVLTAQRQ-LNTTGHNISNANTEG-------YSRQSVVQGTNIPRQYGGETYGMGVHV 61

Query: 71 STFVEEFDP 79
                +D 
Sbjct: 62 EKVRRSWDQ 70


>gi|157371210|ref|YP_001479199.1| flagellar basal body rod protein FlgB [Serratia proteamaculans 568]
 gi|157322974|gb|ABV42071.1| flagellar basal-body rod protein FlgB [Serratia proteamaculans 568]
          Length = 137

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKKIGVDQS 71
           L  Q    +I++ NIANA T G       Y+ + I F   ++     G V    I ++ +
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFAGQLNKVLEQGRVSGSGIALNMT 68

Query: 72  TFVEEFD--------------PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +                    P  P  + +       V++  E  +  + +  Y  +L  
Sbjct: 69  SARHIPAQNMQPPQLDLLFRVPDQPSMDGN------TVDMDRERTNFADNSLKYQTDLTL 122

Query: 118 IK-QSHDMMT 126
           I  Q   MM+
Sbjct: 123 INGQIKGMMS 132


>gi|197336362|ref|YP_002156694.1| flagellar hook-associated protein FlgK [Vibrio fischeri MJ11]
 gi|197317852|gb|ACH67299.1| flagellar hook-associated protein FlgK [Vibrio fischeri MJ11]
          Length = 626

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 38/130 (29%), Gaps = 25/130 (19%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SGGVRVKKIG 67
           L  Q   +   S NI N  T G       + R+++  +  M           GV V  + 
Sbjct: 14  LTAQRQ-LNTTSHNINNVNTEG-------FSRQSVVQDTNMPHWVSGANFGAGVHVAAVR 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSH 122
                F       + +  ++  + Y      N++VL          R+            
Sbjct: 66  RSFDQFA-----TNELNLSTTNLNYSMDTEANLDVLTNMMSSIGAKRIPENINDWFDAVK 120

Query: 123 DMMTTTLDLL 132
            +  +  ++ 
Sbjct: 121 TLADSPNEIG 130


>gi|126734106|ref|ZP_01749853.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp.
          CCS2]
 gi|126716972|gb|EBA13836.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp.
          CCS2]
          Length = 238

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 18/71 (25%)

Query: 9  HIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          + + + L  QS  +     ++ NIANA TTG       +R + I F E         VK 
Sbjct: 3  NASYTALTRQSGLLNEMQTLANNIANASTTG-------FRAEGIIFAEH--------VKT 47

Query: 66 IGVDQSTFVEE 76
          IG D  +    
Sbjct: 48 IGPDAPSLSMA 58



 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYM 112
            G ++  NVN +++   M E  R Y 
Sbjct: 191 QGFLEGSNVNPILQIGRMIEVQRAYE 216


>gi|103488388|ref|YP_617949.1| flagellar basal-body rod FlgF [Sphingopyxis alaskensis RB2256]
 gi|98978465|gb|ABF54616.1| Flagellar basal-body rod FlgF [Sphingopyxis alaskensis RB2256]
          Length = 247

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV       +M E +R +   L+ I    DM + T +L++
Sbjct: 201 IEGSNVTATSALVEMIEASRSWDTQLKMIGDVRDMDSATANLMQ 244


>gi|332758237|gb|EGJ88560.1| flagellar basal-body rod protein flgF [Shigella flexneri 4343-70]
 gi|332767685|gb|EGJ97878.1| hypothetical protein SF293071_1339 [Shigella flexneri 2930-71]
 gi|333008280|gb|EGK27754.1| flagellar basal-body rod protein flgF [Shigella flexneri K-272]
 gi|333019770|gb|EGK39042.1| flagellar basal-body rod protein flgF [Shigella flexneri K-227]
          Length = 123

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 75  SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 120


>gi|238916199|ref|YP_002929716.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens
          ATCC 27750]
 gi|238871559|gb|ACR71269.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens
          ATCC 27750]
          Length = 523

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 16/38 (42%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          M        IA +GL      + + S N+AN  T G T
Sbjct: 1  MASTFFGLTIAYTGLQAAQTSINVTSHNLANINTKGYT 38


>gi|167579496|ref|ZP_02372370.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           TXDOH]
          Length = 667

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ ++ +  T L L
Sbjct: 627 SGVNQNEEAANLMQYQQLYQANAKVIQTANSVFQTVLGL 665


>gi|332088747|gb|EGI93859.1| flagellar basal-body rod protein flgF [Shigella boydii 5216-82]
          Length = 123

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 52  EEVMHGSGGV-RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
            EV  G  G+ R+          V + DP   +   SG+++  NVN +   +DM  + R 
Sbjct: 41  SEVQRGDDGIFRLSAETQATREPVLQADPT--LRVMSGVLEGSNVNAVAAMSDMIASARR 98

Query: 111 YMANLQTIKQSHDMMTTTLDLL 132
           +   ++ I    D       LL
Sbjct: 99  FEMQMKVISSVDDNAGRANQLL 120


>gi|289679027|ref|ZP_06499917.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae
          FF5]
          Length = 377

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 17/70 (24%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG------- 59
          S + A SG+   + R+++   NIAN  T G       ++     F  +   +        
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANVGTLG-------FKSSRAQFSALYASAQLGAGQHA 54

Query: 60 ---GVRVKKI 66
             GVR+  +
Sbjct: 55 VGDGVRLASV 64


>gi|134095091|ref|YP_001100166.1| flagellar hook-associated protein FlgK [Herminiimonas
           arsenicoxydans]
 gi|133738994|emb|CAL62042.1| putative flagellar hook-associated protein 1 FlgK-like
           [Herminiimonas arsenicoxydans]
          Length = 659

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E  ++    + Y A+ + ++   DM    + L R
Sbjct: 619 SGVNLDEEATNLLRYQQAYQASGKVMQAVSDMFDVLISLGR 659


>gi|91785633|ref|YP_560839.1| flagellar basal body rod protein FlgF [Burkholderia xenovorans
           LB400]
 gi|91689587|gb|ABE32787.1| flgF; flagellar basal-body rod protein [Burkholderia xenovorans
           LB400]
          Length = 252

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           DP   +A AS  ++  NVN +     M    R +    + ++ +     +   LL
Sbjct: 197 DPTVTLAPAS--LEGSNVNPVSAMVSMITNARQFQMQTKLLESADKNDQSANQLL 249



 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 12/60 (20%)

Query: 1  MDYLI-ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          MD LI  +   +   L  Q+    I++ N+ANA TTG       +R +  +F  V    G
Sbjct: 1  MDRLIYTAMSGSTQALEQQA----IVANNLANASTTG-------FRAQLATFRAVPMSFG 49


>gi|59712475|ref|YP_205251.1| flagellar hook-associated protein FlgK [Vibrio fischeri ES114]
 gi|59480576|gb|AAW86363.1| flagellar hook-associated protein 1, FlgK [Vibrio fischeri ES114]
          Length = 626

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 38/130 (29%), Gaps = 25/130 (19%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-------SGGVRVKKIG 67
           L  Q   +   S NI N  T G       + R+++  +  M           GV V  + 
Sbjct: 14  LTAQRQ-LNTTSHNINNVNTEG-------FSRQSVVQDTNMPHWVSGANLGAGVHVAAVR 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYP-----NVNVLVETADMRETNRLYMANLQTIKQSH 122
                F       + +  ++  + Y      N++VL          R+            
Sbjct: 66  RSFDQFA-----TNELNLSTTNLNYSMDTEANLDVLTNMMSSIGAKRIPENINDWFDAVK 120

Query: 123 DMMTTTLDLL 132
            +  +  ++ 
Sbjct: 121 TLADSPNEIG 130


>gi|308186394|ref|YP_003930525.1| Flagellar basal-body rod protein flgF [Pantoea vagans C9-1]
 gi|308056904|gb|ADO09076.1| Flagellar basal-body rod protein flgF [Pantoea vagans C9-1]
          Length = 251

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKPVETMVDMIANARRFEMQMKVITNVDENEQKANQLL 248


>gi|256750927|ref|ZP_05491811.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          ethanolicus CCSD1]
 gi|256750262|gb|EEU63282.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          ethanolicus CCSD1]
          Length = 480

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 20/77 (25%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
               IA +GL V    + +   NIANA T G       Y R+ +    +   +      
Sbjct: 4  FQGLEIAKTGLFVSQKALDVTGHNIANANTPG-------YTRQVVDMASIAPPTTFGMYD 56

Query: 60 --------GVRVKKIGV 68
                  GV+++ I  
Sbjct: 57 QWGKAIGEGVKIQDIRQ 73


>gi|237755436|ref|ZP_04584061.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692400|gb|EEP61383.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 236

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  N+NV+ E  +M   +R +   +   K    +     ++ +
Sbjct: 188 KQGYLEGANLNVVKEMVEMINNHRRFDIYMNLAKSLDMLEGKVNEIGK 235


>gi|182418468|ref|ZP_02949762.1| flagellar basal-body rod protein FlgB [Clostridium butyricum
          5521]
 gi|237666504|ref|ZP_04526489.1| flagellar basal-body rod protein FlgB [Clostridium butyricum E4
          str. BoNT E BL5262]
 gi|182377850|gb|EDT75394.1| flagellar basal-body rod protein FlgB [Clostridium butyricum
          5521]
 gi|237657703|gb|EEP55258.1| flagellar basal-body rod protein FlgB [Clostridium butyricum E4
          str. BoNT E BL5262]
          Length = 148

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 7/46 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          GL   + R + IS N+AN  T         Y++  + FEE +  + 
Sbjct: 18 GLKASNLRAKTISNNMANINT-------KNYKKFGVVFEENLKNNS 56


>gi|187925764|ref|YP_001897406.1| flagellar basal body rod protein FlgB [Burkholderia phytofirmans
          PsJN]
 gi|187716958|gb|ACD18182.1| flagellar basal-body rod protein FlgB [Burkholderia phytofirmans
          PsJN]
          Length = 164

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       Y+ + + F   + G+
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YKARDVDFASSLAGA 52


>gi|330818588|ref|YP_004362293.1| flagellar basal-body rod protein FlgB [Burkholderia gladioli
          BSR3]
 gi|327370981|gb|AEA62337.1| flagellar basal-body rod protein FlgB [Burkholderia gladioli
          BSR3]
          Length = 162

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 7/69 (10%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           L V++ R +++S NIANA T G       Y+ + + F   +  +   +  +   D +T 
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YQARDVDFGATLGRALKQQAGQATTDNATR 67

Query: 74 VEEFDPGHP 82
          +    P   
Sbjct: 68 LPLAQPAGV 76


>gi|302037635|ref|YP_003797957.1| first flagellar hook-filament junction protein FlgK [Candidatus
           Nitrospira defluvii]
 gi|300605699|emb|CBK42032.1| First flagellar hook-filament junction protein FlgK [Candidatus
           Nitrospira defluvii]
          Length = 464

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E  ++ +  R + A  + I  S +M+ T L L R
Sbjct: 424 SGVSMDEELINLLKYQRAFEAASKLITTSDEMLQTILTLKR 464


>gi|256833244|ref|YP_003161971.1| flagellar basal-body rod protein FlgB [Jonesia denitrificans DSM
           20603]
 gi|256686775|gb|ACV09668.1| flagellar basal-body rod protein FlgB [Jonesia denitrificans DSM
           20603]
          Length = 113

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 32/125 (25%)

Query: 13  SGLA--VQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-----EVMHGSGGVRVKK 65
           S L    Q  R  +I+ N+AN  T         +  + + FE     +V  G+G V    
Sbjct: 12  SALDGLAQRQR--VIANNVANINTPN-------FHAQRVQFEDELSRQVQRGNGAV---- 58

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                 T     +P     N        NVN+  ET    +T   Y    Q I  ++  +
Sbjct: 59  ----TPTVQRSLEPTRLDGN--------NVNLDTETLLNIDTVLRYQLATQAIDGTYSSL 106

Query: 126 TTTLD 130
              + 
Sbjct: 107 RAAMR 111


>gi|218290051|ref|ZP_03494218.1| protein of unknown function DUF1078 domain protein
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218239885|gb|EED07073.1| protein of unknown function DUF1078 domain protein
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 262

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 16/45 (35%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V   NV+     A +      Y  N Q I  ++ ++     +
Sbjct: 213 QGAVNASNVDETAAMAQLVAAQDFYEENAQAISMANQLLGLADTI 257


>gi|255597140|ref|XP_002536705.1| Flagellar hook-associated protein, putative [Ricinus communis]
 gi|223518821|gb|EEF25678.1| Flagellar hook-associated protein, putative [Ricinus communis]
          Length = 439

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 14/59 (23%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------VMHGSGGVRVKKI 66
           LA Q+A +  +S+N+AN +T G       Y R+ +  +        +    GV++  +
Sbjct: 11 ALAAQAA-LNTVSQNLANVQTPG-------YTRQGVLLQATASDPGTLSAGNGVKIGSL 61


>gi|83720978|ref|YP_440808.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           E264]
 gi|167617593|ref|ZP_02386224.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           Bt4]
 gi|257140541|ref|ZP_05588803.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           E264]
 gi|83654803|gb|ABC38866.1| flagellar hook-associated protein 1 [Burkholderia thailandensis
           E264]
          Length = 667

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ ++ +  T L L
Sbjct: 627 SGVNQNEEAANLMQYQQLYQANAKVIQTANSVFQTVLGL 665


>gi|326386927|ref|ZP_08208541.1| flagellar proximal rod protein [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208607|gb|EGD59410.1| flagellar proximal rod protein [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 118

 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 18/121 (14%)

Query: 1   MDYLIAS-AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-S 58
           M  +  S   I    L +++ R+ +++ NIANA     TPG   Y+ + I F   +   +
Sbjct: 1   MSIMGDSLFGIHGMALELRAQRLGLLTSNIANA----ATPG---YKARDIDFASALKSMT 53

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            G    +     + +     P        G      V +  E     E    Y A L  I
Sbjct: 54  QGASNSQAISSSTLYRVPVMPS-----LDGN----TVELSTEQTAFAENAVGYEATLNMI 104

Query: 119 K 119
           +
Sbjct: 105 Q 105


>gi|309788145|ref|ZP_07682751.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617]
 gi|308923997|gb|EFP69498.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617]
          Length = 123

 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 75  SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 120


>gi|170722885|ref|YP_001750573.1| flagellar hook-associated protein FlgK [Pseudomonas putida W619]
 gi|169760888|gb|ACA74204.1| flagellar hook-associated protein FlgK [Pseudomonas putida W619]
          Length = 682

 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK 47
          + +  +I  SGL+   + +     NIANA   G +   +  R K
Sbjct: 1  MASLINIGMSGLSASQSGLHTTGNNIANADVAGYSRQQNIQRAK 44


>gi|120613066|ref|YP_972744.1| flagellar hook-associated protein FlgK [Acidovorax citrulli
          AAC00-1]
 gi|120591530|gb|ABM34970.1| flagellar hook-associated protein FlgK [Acidovorax citrulli
          AAC00-1]
          Length = 642

 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 14/79 (17%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++  ++    L      +Q    NIAN  T G       Y R+T+S + V          
Sbjct: 1  MSLLNVGARALLANQVALQTTGHNIANVNTAG-------YSRQTLSLQTVQGQFTGGGYI 53

Query: 58 SGGVRVKKIGVDQSTFVEE 76
            GV V+ I  + +  +  
Sbjct: 54 GQGVDVQTILRNHNELLTR 72


>gi|224825783|ref|ZP_03698887.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002]
 gi|224602007|gb|EEG08186.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002]
          Length = 457

 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E  ++ E  ++Y AN++ I  ++ +  +TL +
Sbjct: 418 SGVNSDEEAINLVEFQKMYQANMKVIAVANQLFDSTLAI 456


>gi|220924579|ref|YP_002499881.1| flagellar basal body rod protein FlgF [Methylobacterium nodulans
          ORS 2060]
 gi|219949186|gb|ACL59578.1| flagellar basal body rod protein [Methylobacterium nodulans ORS
          2060]
          Length = 248

 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 10/53 (18%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          GL+ Q      +++I+ N+AN  TTG       ++ +T  F+E +        
Sbjct: 8  GLSAQVALGRELEVIANNMANVSTTG-------FKARTTRFQEYLMPKASAET 53


>gi|116326933|ref|YP_796653.1| flagellar hook-associated protein FlgK [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116332402|ref|YP_802120.1| flagellar hook-associated protein FlgK [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116119677|gb|ABJ77720.1| Endoflagellar hook junction protein [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116126091|gb|ABJ77362.1| Endoflagellar hook junction protein [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 636

 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 20/36 (55%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           VN+  E A+M +    Y A+ + I   ++++ T ++
Sbjct: 597 VNLDEEMANMVQFQHSYNASAKMINTINEILDTIIN 632


>gi|330889084|gb|EGH21745.1| flagellar hook protein FlgE [Pseudomonas syringae pv. mori str.
           301020]
          Length = 419

 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 15/37 (40%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           NV +  E   + +    Y AN + I     +M T + 
Sbjct: 381 NVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 417


>gi|325289235|ref|YP_004265416.1| flagellar hook-associated protein FlgK [Syntrophobotulus
          glycolicus DSM 8271]
 gi|324964636|gb|ADY55415.1| flagellar hook-associated protein FlgK [Syntrophobotulus
          glycolicus DSM 8271]
          Length = 512

 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 10/78 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS--FEEVMHGS 58
          M+       +   GL    A +  I+ NI+NA TTG       Y R+ ++      +  +
Sbjct: 1  MNSFF-GLTVGLKGLTASQAALNTINHNISNAGTTG-------YSRQVVAQKASRALAAA 52

Query: 59 GGVRVKKIGVDQSTFVEE 76
           G  +   GVD +T V+ 
Sbjct: 53 NGAGMVGTGVDITTIVQI 70


>gi|15615024|ref|NP_243327.1| flagellar basal body rod protein FlgB [Bacillus halodurans C-125]
 gi|10175081|dbj|BAB06180.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
          Length = 132

 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 9/57 (15%)

Query: 4  LIASAHIAN--SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L +S+ ++    GL   S + + IS+NIAN  T         Y+ K ++F++V   +
Sbjct: 3  LFSSSTLSALEKGLYGASLQQRAISQNIANVDTPN-------YKAKKVNFQKVFDEA 52


>gi|330830297|ref|YP_004393249.1| flagellar hook-associated protein FlgK [Aeromonas veronii B565]
 gi|328805433|gb|AEB50632.1| Flagellar hook-associated protein FlgK [Aeromonas veronii B565]
          Length = 667

 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGGVRVKKI 66
            I +SG+  Q   +Q  S NI N  +          R +T+ +   +  G+G ++ +++
Sbjct: 6  LGIGSSGVLAQQRLLQTTSNNIVNVNS------QGYVRERTLVYTNTIGLGTGDIKTQRV 59

Query: 67 GVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
            D        D     A+ +   +   V+ L
Sbjct: 60 INDYMQGEVRRDTSAYHASLTHYEQLAGVDSL 91


>gi|223040539|ref|ZP_03610811.1| flagellar hook-associated protein FlgK [Campylobacter rectus
          RM3267]
 gi|222878174|gb|EEF13283.1| flagellar hook-associated protein FlgK [Campylobacter rectus
          RM3267]
          Length = 617

 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 14/80 (17%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEV 54
          M  + +S HI  +GL     ++     NI NA        ++ Y R+ +       F ++
Sbjct: 1  MANIFSSLHIGMTGLDAAQTQITTTGHNITNAD-------NEHYTRQRVVQSAREAFHDI 53

Query: 55 MHGSG-GVRVKKIGVDQSTF 73
              G G +V  +      F
Sbjct: 54 PGDIGTGTQVDTVVRVHDEF 73


>gi|83309713|ref|YP_419977.1| flagellar basal body protein [Magnetospirillum magneticum AMB-1]
 gi|82944554|dbj|BAE49418.1| Flagellar basal body protein [Magnetospirillum magneticum AMB-1]
          Length = 133

 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 6/64 (9%)

Query: 17 VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
           Q    ++++ NIANA T    P       K + F+EV+ G+    V     +    V E
Sbjct: 19 AQRQ--EVLASNIANANTPRYLPKDI----KPLDFKEVLAGTAQPDVGATTTNAKHIVPE 72

Query: 77 FDPG 80
            P 
Sbjct: 73 VTPS 76


>gi|328545508|ref|YP_004305617.1| flagellar basal-body rod protein B [polymorphum gilvum SL003B-26A1]
 gi|326415249|gb|ADZ72312.1| Flagellar basal-body rod protein B [Polymorphum gilvum SL003B-26A1]
          Length = 126

 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 38/112 (33%), Gaps = 8/112 (7%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           S R   I+ENIAN+ T G         R  + F  V   +        G       E+ +
Sbjct: 18  SVRQATIAENIANSDTPGFA------ARDVVPFASVFDQTRLAMTATHGAHMGGAAEQAE 71

Query: 79  PGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           P     + +  V +    V++  E     E  R +  N    K  H M   +
Sbjct: 72  PAEVEKSETWQVTHSGNSVSLEQELMKAGEVARSHALNTSLAKSFHRMYLAS 123


>gi|68164540|gb|AAY87269.1| predicted flagellar hook-associated protein 1 [uncultured
          bacterium BAC17H8]
          Length = 1404

 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 21/69 (30%), Gaps = 4/69 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTT----GDTPGSDPYRRKTISFEEVMHGSG 59
          +     I  SGL      + I  +NIAN  T           +    K    E       
Sbjct: 1  MANLFDIGRSGLNSYRQGLAITGQNIANINTDGYKRRGAELEELSAAKASVLESSQGSGM 60

Query: 60 GVRVKKIGV 68
          GVR+  I  
Sbjct: 61 GVRIGTIRR 69


>gi|323700468|ref|ZP_08112380.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. ND132]
 gi|323460400|gb|EGB16265.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans
           ND132]
          Length = 669

 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VNV  E  ++ +  + Y A  Q I  + +MM T LD+
Sbjct: 630 SEVNVDEELIELTKYQQAYEAAAQIISVTREMMETVLDM 668


>gi|290474980|ref|YP_003467864.1| flagellar hook-filament junction protein 1 [Xenorhabdus bovienii
          SS-2004]
 gi|289174297|emb|CBJ81087.1| flagellar biosynthesis; hook-filament junction protein 1
          [Xenorhabdus bovienii SS-2004]
          Length = 546

 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 17/86 (19%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---VMHGSG--- 59
          +  + A SG+      M ++  NIAN++  G       Y R+T    +    +  +G   
Sbjct: 4  SLMNTAMSGINAAQVAMGVVGNNIANSKNVG-------YNRQTTVLTQNNGTLSPAGFIG 56

Query: 60 -GVRVKKIGVDQSTFVEEFDPGHPVA 84
           GV V  I  + S F+   +  H  A
Sbjct: 57 NGVAVSSINREYSEFI---NQQHSSA 79


>gi|229826299|ref|ZP_04452368.1| hypothetical protein GCWU000182_01671 [Abiotrophia defectiva ATCC
          49176]
 gi|229789169|gb|EEP25283.1| hypothetical protein GCWU000182_01671 [Abiotrophia defectiva ATCC
          49176]
          Length = 131

 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 7/48 (14%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
           ++          R  +IS NIAN  T G       Y+RK + FE  +
Sbjct: 10 INVLGKAADASWLRNNLISNNIANNDTPG-------YKRKDVQFESYL 50


>gi|146311247|ref|YP_001176321.1| flagellar basal body rod protein FlgF [Enterobacter sp. 638]
 gi|145318123|gb|ABP60270.1| flagellar basal-body rod protein FlgF [Enterobacter sp. 638]
          Length = 251

 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM  + R +   ++ I    +       LL
Sbjct: 203 SGVLEGSNVKPVAAMTDMIASARRFEMQMKVITSVDENAGRANQLL 248


>gi|307546967|ref|YP_003899446.1| flagellar basal body rod protein FlgF [Halomonas elongata DSM 2581]
 gi|307218991|emb|CBV44261.1| flagellar basal body rod protein FlgF [Halomonas elongata DSM 2581]
          Length = 253

 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG ++  NV+ +     M +  R Y    + I+ + +       LL
Sbjct: 204 SGALEGSNVSAVDAMVSMIDVARRYELQTKVIETADENAQRANSLL 249


>gi|296102907|ref|YP_003613053.1| flagellar basal body rod protein FlgF [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057366|gb|ADF62104.1| flagellar basal body rod protein FlgF [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 251

 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM  + R +   ++ I    +       LL
Sbjct: 203 SGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDENAGKANQLL 248


>gi|293395580|ref|ZP_06639863.1| flagellar basal-body rod protein FlgB [Serratia odorifera DSM 4582]
 gi|291421899|gb|EFE95145.1| flagellar basal-body rod protein FlgB [Serratia odorifera DSM 4582]
          Length = 137

 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 21/124 (16%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-RVKKIGVDQSTF 73
           L  Q    +I++ NIANA T G       Y+ + I F   ++      R    GV  S  
Sbjct: 18  LRAQRQ--EILAGNIANADTPG-------YQARDIDFASQLNKVMAQGRASGSGVALSLT 68

Query: 74  VEEFDPGHPVANA--SGIVKYPN--------VNVLVETADMRETNRLYMANLQTIK-QSH 122
                P   +       + + P+        V++  E  +  + +  Y  +L  +  Q  
Sbjct: 69  SARHIPAQNLQPPQLDLLFRVPDQPSIDGNTVDMDRERTNFADNSLKYQTDLTLLNGQIK 128

Query: 123 DMMT 126
            MM+
Sbjct: 129 GMMS 132


>gi|238755323|ref|ZP_04616666.1| Flagellar basal-body rod protein flgF [Yersinia ruckeri ATCC 29473]
 gi|238706459|gb|EEP98833.1| Flagellar basal-body rod protein flgF [Yersinia ruckeri ATCC 29473]
          Length = 251

 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKPVETMVDMIANARRFEMQMKVIHSVDENEQRANQLL 248


>gi|207092742|ref|ZP_03240529.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_AG0C1]
          Length = 646

 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 14 GLAVQSARMQIISENIANARTTG 36
          G+      + I S NIAN  TTG
Sbjct: 11 GMQAHQIALDIESNNIANVNTTG 33


>gi|68164549|gb|AAY87278.1| predicted flagellar proximal rod protein [uncultured bacterium
           BAC17H8]
          Length = 128

 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 57/129 (44%), Gaps = 22/129 (17%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +    ++  + L V++ R +I++ NIANA     TP    ++ + I+F+ +++ S G
Sbjct: 1   MKGIGDYLNLHATALTVRAKRNKILASNIANA----ATPN---FKARDINFQALINKSEG 53

Query: 61  --------VRVKKIGVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                    R  K+ ++ S    ++  P +P  + +  V+  NV  +  + ++      Y
Sbjct: 54  EGPIRATDARHFKVSLEASAEKMKYRTPVNPSRDGN-TVEM-NVEQMEFSENVMR----Y 107

Query: 112 MANLQTIKQ 120
              L  +  
Sbjct: 108 QTTLTFLNN 116


>gi|328958287|ref|YP_004375673.1| flagellar basal body rod protein FlgB [Carnobacterium sp. 17-4]
 gi|328674611|gb|AEB30657.1| flagellar basal body rod protein FlgB [Carnobacterium sp. 17-4]
          Length = 142

 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 48/129 (37%), Gaps = 27/129 (20%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-SGGVRVKKIGV---- 68
            L   S R ++IS NIAN  T         Y+   + FE ++   S G  + K       
Sbjct: 28  ALDAASMRQEMISSNIANVNTAD-------YKVNKVEFESILENVSNGTAMNKTNDLHIG 80

Query: 69  -----DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL--YMANLQTIKQS 121
                + +  V +        N +      NV++ +E A+  E +    Y + +  +   
Sbjct: 81  FGNLNEVTPVVSKRTDTSVKENGN------NVDIDIEMAE--EASNSIYYNSLVTQLNAK 132

Query: 122 HDMMTTTLD 130
           + M+ + + 
Sbjct: 133 YSMLRSVIT 141


>gi|295096224|emb|CBK85314.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 243

 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM  + R +   ++ I    +       LL
Sbjct: 195 SGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDENAGKANQLL 240


>gi|91224202|ref|ZP_01259465.1| flagellar basal body rod protein [Vibrio alginolyticus 12G01]
 gi|269965641|ref|ZP_06179754.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B]
 gi|91191113|gb|EAS77379.1| flagellar basal body rod protein [Vibrio alginolyticus 12G01]
 gi|269829709|gb|EEZ83945.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B]
          Length = 120

 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 9/50 (18%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGV 61
           L  +  R ++++ N+AN  T G       Y  K +SF  VM+   +GGV
Sbjct: 15 ALNFRVQRTKVLASNLANVDTPG-------YLAKDLSFTTVMNQVTAGGV 57


>gi|255021361|ref|ZP_05293409.1| Flagellar hook-associated protein flgK [Acidithiobacillus caldus
          ATCC 51756]
 gi|254969224|gb|EET26738.1| Flagellar hook-associated protein flgK [Acidithiobacillus caldus
          ATCC 51756]
          Length = 684

 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 30/75 (40%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +      A SGL V    +Q+   NIAN  T G +  S        +F    +   G
Sbjct: 1  MSGVSGILSSALSGLQVAQDALQVTGNNIANVNTPGYSQESVVQSSLPTTFLGGQYYGNG 60

Query: 61 VRVKKIGVDQSTFVE 75
           +V  +    S+F++
Sbjct: 61 AQVSSVQRAYSSFLQ 75


>gi|294872301|ref|XP_002766235.1| hypothetical protein Pmar_PMAR002684 [Perkinsus marinus ATCC 50983]
 gi|239866927|gb|EEQ98952.1| hypothetical protein Pmar_PMAR002684 [Perkinsus marinus ATCC 50983]
          Length = 533

 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
            R   SF   + GS G  V+ +  D S+            N++G V    V+  +  ++M
Sbjct: 258 ARSIPSFNRRLVGSSG-EVEGLTKDDSSD------DGSHENSTGGVHDAAVDSSINVSEM 310

Query: 105 RETNRLYMAN-LQTIKQSHDMMTTT 128
             T+  Y+A+  + + Q   M+ T 
Sbjct: 311 IATSESYLADHCKVLNQLRTMLRTA 335


>gi|323527716|ref|YP_004229869.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1001]
 gi|323384718|gb|ADX56809.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1001]
          Length = 163

 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       Y+ + + F   + G+
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YKARDVDFASSLAGA 52


>gi|116872071|ref|YP_848852.1| flagellar basal body rod protein FlgG [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116740949|emb|CAK20069.1| flagellar basal-body rod protein, putative [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 259

 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 6/34 (17%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ +E   + +  R+  A+   + 
Sbjct: 210 QNGVLETSNVDLGIEMVQLMDNQRMVQASKNVVN 243


>gi|91776315|ref|YP_546071.1| flagellar hook-associated protein FlgK [Methylobacillus flagellatus
           KT]
 gi|91710302|gb|ABE50230.1| Flagellar hook-associated protein [Methylobacillus flagellatus KT]
          Length = 645

 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 34/106 (32%), Gaps = 16/106 (15%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +    +I  + L      +     NIANA T G       Y R+ I        +     
Sbjct: 1   MSNIFNIGKTALNAAQVGISTTGHNIANANTEG-------YSRQVIVQSAGQAQAWGFGY 53

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASG-IVKYPNVNVLVET 101
              G +V  +    +  +      +  + ASG   +  N+N +   
Sbjct: 54  LGNGTQVDTVKRVYNELLSR-QISNSQSIASGINTQLSNINHINNM 98


>gi|297617135|ref|YP_003702294.1| flagellar basal-body rod protein FlgB [Syntrophothermus
          lipocalidus DSM 12680]
 gi|297144972|gb|ADI01729.1| flagellar basal-body rod protein FlgB [Syntrophothermus
          lipocalidus DSM 12680]
          Length = 138

 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L     R ++I+ N+AN  T G       Y+   ++FEE +  S
Sbjct: 17 ALDGAMLRQKVIANNLANVDTPG-------YKAMEVTFEEQLKNS 54


>gi|212637786|ref|YP_002314311.1| flagellar basal body rod protein [Shewanella piezotolerans WP3]
 gi|212559270|gb|ACJ31724.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3]
          Length = 244

 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           +SG ++  NV  + E     + +R +   ++ +K +  +      LLRD
Sbjct: 195 SSGFLEASNVQAVGELIAAMDLSRQFEIQVKLMKSAEKLAEAGNRLLRD 243



 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 11/40 (27%)

Query: 1  MDYLIASAHIANSG----LAVQSARMQIISENIANARTTG 36
          MD ++ +   A +G    +  Q+ R    + N+ANA TTG
Sbjct: 1  MDRMLYT---AATGAARVMEAQAIR----ANNLANADTTG 33


>gi|83719578|ref|YP_440798.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
          E264]
 gi|167617582|ref|ZP_02386213.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
          Bt4]
 gi|257140551|ref|ZP_05588813.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
          E264]
 gi|83653403|gb|ABC37466.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
          E264]
          Length = 163

 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       YR + + F   +  +
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YRARDVDFSSTLARA 52


>gi|258592553|emb|CBE68862.1| putative Flagellar hook-associated protein 1 (HAP1) [NC10
          bacterium 'Dutch sediment']
          Length = 466

 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 7/67 (10%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANART---TGDTPGSDPYRRKTISFEEVMHG 57
          M  L AS  +A   L  Q   +Q    NIANA T   T       P     + F     G
Sbjct: 1  MISLQASLTMARKALQAQQVAIQTTGHNIANANTPGFTRQRVDLTP----AVPFSLGSVG 56

Query: 58 SGGVRVK 64
          S G  V 
Sbjct: 57 SLGTGVD 63


>gi|325982365|ref|YP_004294767.1| flagellar hook-associated protein FlgK [Nitrosomonas sp. AL212]
 gi|325531884|gb|ADZ26605.1| flagellar hook-associated protein FlgK [Nitrosomonas sp. AL212]
          Length = 638

 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 9/74 (12%)

Query: 7  SAHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
             I  SGL   Q+  +   S NI+N      TPG   Y R+ +        S G     
Sbjct: 5  ILDIGISGLLTAQNQLL-TTSHNISNV----ATPG---YNRQQVILNTNTPQSSGAGFVG 56

Query: 66 IGVDQSTFVEEFDP 79
           GV  +T    ++ 
Sbjct: 57 RGVHSTTVQRIYNQ 70


>gi|114798876|ref|YP_758980.1| flagellar hook-associated protein FlgK [Hyphomonas neptunium ATCC
          15444]
 gi|114739050|gb|ABI77175.1| flagellar hook-associated protein FlgK [Hyphomonas neptunium ATCC
          15444]
          Length = 483

 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 13/67 (19%)

Query: 8  AHIAN------SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            I+       SGL V S + +I++ N+ANA     TPG   Y R+++   E+++GS   
Sbjct: 1  MSISAAILAARSGLQVTSQKAEIVATNVANA----STPG---YVRRSLVVGELVNGSQTA 53

Query: 62 RVKKIGV 68
           V   GV
Sbjct: 54 GVMANGV 60


>gi|330811238|ref|YP_004355700.1| flagellar basal-body rod protein [Pseudomonas brassicacearum
          subsp. brassicacearum NFM421]
 gi|327379346|gb|AEA70696.1| Putative flagellar basal-body rod protein [Pseudomonas
          brassicacearum subsp. brassicacearum NFM421]
          Length = 135

 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
           +  I    L+ ++ R ++++ NIANA T         Y+ + + F +V+
Sbjct: 7  KALGIHEQALSFRAQRAEVLANNIANADTPN-------YKARDLDFSKVL 49


>gi|22127326|ref|NP_670749.1| flagellar basal body rod protein FlgF [Yersinia pestis KIM 10]
 gi|45442797|ref|NP_994336.1| flagellar basal body rod protein FlgF [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108809054|ref|YP_652970.1| flagellar basal body rod protein FlgF [Yersinia pestis Antiqua]
 gi|108810749|ref|YP_646516.1| flagellar basal body rod protein FlgF [Yersinia pestis Nepal516]
 gi|145597818|ref|YP_001161894.1| flagellar basal body rod protein FlgF [Yersinia pestis Pestoides F]
 gi|166212093|ref|ZP_02238128.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399157|ref|ZP_02304681.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167425211|ref|ZP_02316964.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229837409|ref|ZP_04457572.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A]
 gi|229900946|ref|ZP_04516070.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516]
 gi|21960407|gb|AAM87000.1|AE013948_8 putative flagellar rod protein [Yersinia pestis KIM 10]
 gi|45437663|gb|AAS63213.1| putative flagellar rod protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108774397|gb|ABG16916.1| hypothetical protein YPN_0584 [Yersinia pestis Nepal516]
 gi|108780967|gb|ABG15025.1| hypothetical protein YPA_3063 [Yersinia pestis Antiqua]
 gi|145209514|gb|ABP38921.1| hypothetical protein YPDSF_0510 [Yersinia pestis Pestoides F]
 gi|166206839|gb|EDR51319.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167051661|gb|EDR63069.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055974|gb|EDR65755.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229682285|gb|EEO78377.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516]
 gi|229705532|gb|EEO91542.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A]
 gi|320016710|gb|ADW00282.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 243

 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV+ + E       +R + A ++ +K + D+      ++R
Sbjct: 201 SNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMIR 241


>gi|51597636|ref|YP_071827.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           IP 32953]
 gi|186896770|ref|YP_001873882.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           PB1/+]
 gi|51590918|emb|CAH22574.1| putative flagellar basal-body rod protein FlgF [Yersinia
           pseudotuberculosis IP 32953]
 gi|186699796|gb|ACC90425.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           PB1/+]
          Length = 243

 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV+ + E       +R + A ++ +K + D+      ++R
Sbjct: 201 SNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMIR 241


>gi|315180489|gb|ADT87403.1| flagellar basal body rod protein [Vibrio furnissii NCTC 11218]
          Length = 104

 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 7/39 (17%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + R  +++ NIANA T         Y+ K +SF  VM G
Sbjct: 7  TERTSVLASNIANADTPN-------YKAKDVSFNVVMTG 38


>gi|162421354|ref|YP_001604846.1| flagellar basal body rod protein FlgF [Yersinia pestis Angola]
 gi|162354169|gb|ABX88117.1| flagellar basal-body rod protein FlgF [Yersinia pestis Angola]
          Length = 243

 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV+ + E       +R + A ++ +K + D+      ++R
Sbjct: 201 SNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMIR 241


>gi|294013092|ref|YP_003546552.1| flagellar hook-associated protein 1 FlgK [Sphingobium japonicum
           UT26S]
 gi|292676422|dbj|BAI97940.1| flagellar hook-associated protein 1 FlgK [Sphingobium japonicum
           UT26S]
          Length = 446

 Score = 34.5 bits (79), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 17/107 (15%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     I  SG       M  +SENIANA T G       Y R+++     +        
Sbjct: 1   MSDLFIIGASGTKAYRTAMAAVSENIANASTEG-------YSRRSV---TTVESGSSTAT 50

Query: 64  KKIGVDQSTF-----VEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
             + + ++ F             P  +A+  V+Y N  +    A MR
Sbjct: 51  MAVYISRANFGGTDVKSVNRATDPYLDAT--VRYTNTQLGSAVARMR 95


>gi|258625233|ref|ZP_05720145.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM603]
 gi|258582480|gb|EEW07317.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM603]
          Length = 243

 Score = 34.5 bits (79), Expect = 4.3,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 16/39 (41%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            V+  NV+ + E   +    R +   ++ +K +  +   
Sbjct: 197 HVEGSNVSAVDELLSVMSLTRNFEMQVRMMKSAETLAQA 235


>gi|27381968|ref|NP_773497.1| flagellar hook-associated protein FlgK [Bradyrhizobium japonicum
           USDA 110]
 gi|27355138|dbj|BAC52122.1| flgK [Bradyrhizobium japonicum USDA 110]
          Length = 491

 Score = 34.5 bits (79), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             VN+  E + M +  R Y A+ + I     M+ + L
Sbjct: 450 SGVNMDDEMSLMLQVERTYSASSKIISTVDQMLQSLL 486


>gi|258622489|ref|ZP_05717511.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM573]
 gi|258585189|gb|EEW09916.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM573]
          Length = 243

 Score = 34.5 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 16/39 (41%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            V+  NV+ + E   +    R +   ++ +K +  +   
Sbjct: 197 HVEGSNVSAVDELLSVMSLTRNFEMQVRMMKSAETLAQA 235


>gi|77165837|ref|YP_344362.1| hypothetical protein Noc_2374 [Nitrosococcus oceani ATCC 19707]
 gi|254434880|ref|ZP_05048388.1| flagellar basal-body rod protein FlgF [Nitrosococcus oceani AFC27]
 gi|76884151|gb|ABA58832.1| Protein of unknown function DUF1078 [Nitrosococcus oceani ATCC
           19707]
 gi|207091213|gb|EDZ68484.1| flagellar basal-body rod protein FlgF [Nitrosococcus oceani AFC27]
          Length = 246

 Score = 34.5 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV+ +    +M    R Y    + +K + D+ T +  +LR
Sbjct: 198 SGKLESSNVSGVDALVEMIALARQYEMQTKMMKTAEDLDTASAQMLR 244


>gi|254516995|ref|ZP_05129053.1| flagellar hook-associated protein FlgK [gamma proteobacterium
          NOR5-3]
 gi|219674500|gb|EED30868.1| flagellar hook-associated protein FlgK [gamma proteobacterium
          NOR5-3]
          Length = 639

 Score = 34.5 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 9/77 (11%)

Query: 4  LIASAHIANSGL-AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          +    +I  S L ++Q A +     NIAN  T G       + R+ + F  +     G  
Sbjct: 1  MADVLNIGTSALLSLQRA-ISTTGHNIANVNTEG-------FSRQRVEFAALEPQLSGAG 52

Query: 63 VKKIGVDQSTFVEEFDP 79
              GV  +     +D 
Sbjct: 53 FVGSGVTIAAITRSYDQ 69


>gi|152980141|ref|YP_001353117.1| flagellar hook-associated protein FlgK [Janthinobacterium sp.
           Marseille]
 gi|151280218|gb|ABR88628.1| FlgK flagellar hook-associated protein [Janthinobacterium sp.
           Marseille]
          Length = 647

 Score = 34.5 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E  ++    + Y A+ + ++   DM    + L R
Sbjct: 607 SGVNLDEEATNLLRYQQAYQASGKVMQAVSDMFDVLISLGR 647


>gi|332671742|ref|YP_004454750.1| alpha-L-arabinofuranosidase domain-containing protein [Cellulomonas
           fimi ATCC 484]
 gi|332340780|gb|AEE47363.1| alpha-L-arabinofuranosidase domain protein [Cellulomonas fimi ATCC
           484]
          Length = 513

 Score = 34.5 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 3/27 (11%)

Query: 76  EFDPGHPVANASGIVKYPNV-NVLVET 101
            ++PGHP A+  G     +V +++ E 
Sbjct: 37  IYEPGHPAADERGF--RTDVLDLVREM 61


>gi|157738172|ref|YP_001490856.1| flagellar basal body rod protein FlgB [Arcobacter butzleri
          RM4018]
 gi|315636315|ref|ZP_07891565.1| flagellar basal body rod protein FlgB [Arcobacter butzleri JV22]
 gi|157700026|gb|ABV68186.1| flagellar basal body rod protein FlgB [Arcobacter butzleri
          RM4018]
 gi|315479404|gb|EFU70087.1| flagellar basal body rod protein FlgB [Arcobacter butzleri JV22]
          Length = 132

 Score = 34.5 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 7/36 (19%)

Query: 24 IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          +IS NIAN  T         Y+ K + F+E +  + 
Sbjct: 23 VISSNIANVNTPN-------YKTKDLVFQEELDKNS 51


>gi|153946948|ref|YP_001399635.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           IP 31758]
 gi|152958443|gb|ABS45904.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           IP 31758]
          Length = 243

 Score = 34.5 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV+ + E       +R + A ++ +K + D+      ++R
Sbjct: 201 SNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMIR 241


>gi|319787120|ref|YP_004146595.1| flagellar basal-body rod protein FlgF [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465632|gb|ADV27364.1| flagellar basal-body rod protein FlgF [Pseudoxanthomonas suwonensis
           11-1]
          Length = 249

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 6/61 (9%)

Query: 79  PGHPVANASGIV------KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           P  P+  A G V      +  NV+       M +  R +   ++ IK   +    +  LL
Sbjct: 186 PQQPLQQAPGTVMTTGALEESNVDAAGALVQMIQLQRQFEMQVKVIKTGDENARASTSLL 245

Query: 133 R 133
           R
Sbjct: 246 R 246


>gi|307293781|ref|ZP_07573625.1| flagellar hook-associated protein FlgK [Sphingobium
           chlorophenolicum L-1]
 gi|306879932|gb|EFN11149.1| flagellar hook-associated protein FlgK [Sphingobium
           chlorophenolicum L-1]
          Length = 446

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 17/107 (15%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     I  SG       M  +SENIANA T G       Y R+++     +        
Sbjct: 1   MSDLFIIGASGTKAYRTAMAAVSENIANASTEG-------YSRRSV---TTVESGSSTAT 50

Query: 64  KKIGVDQSTF-----VEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
             + + ++ F             P  +A+  V+Y N  +    A MR
Sbjct: 51  MAVYISRANFGGTDVKSVNRSTDPYLDAT--VRYTNTQLGSAVARMR 95


>gi|297538902|ref|YP_003674671.1| flagellar hook-associated protein FlgK [Methylotenera sp. 301]
 gi|297258249|gb|ADI30094.1| flagellar hook-associated protein FlgK [Methylotenera sp. 301]
          Length = 650

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 19/57 (33%), Gaps = 7/57 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +     I  S LA     +     NIANA T G       Y R+ +        S G
Sbjct: 1  MADILSIGKSALAAAQVGLSTTGHNIANASTPG-------YSRQVVIQAAAQAQSSG 50


>gi|213419605|ref|ZP_03352671.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 29

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 12/29 (41%)

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +M +  R Y  N + +  +  M+     L
Sbjct: 1   NMIQVQRAYEINSKAVSTTDQMLQKLTQL 29


>gi|183220164|ref|YP_001838160.1| flagellar basal body rod protein FlgB [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
 gi|189910284|ref|YP_001961839.1| flagellar basal body rod protein FlgB [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Ames)']
 gi|167774960|gb|ABZ93261.1| Endoflagellar proximal basal body rod protein [Leptospira biflexa
          serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778586|gb|ABZ96884.1| Flagellar basal-body rod protein FlgB [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
          Length = 143

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          GL   + R ++I++NIANA           ++R  + FE ++  +
Sbjct: 17 GLGAATQRRKVITDNIANADVPN-------FKRSEVVFESMLKRA 54


>gi|288962677|ref|YP_003452971.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288914943|dbj|BAI76427.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 243

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 10/49 (20%)

Query: 14 GLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          GL+ Q     ++ +++ N+AN  T G       +R +   FE  M   G
Sbjct: 8  GLSRQMALRRQLDVVANNVANMNTAG-------FRGERTLFEAAMEAGG 49


>gi|258512706|ref|YP_003186140.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479432|gb|ACV59751.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 262

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 16/45 (35%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G V   NV+     A +      Y  N Q I  ++ ++     +
Sbjct: 213 QGAVNASNVDETAAMAQLVAAQDFYEENAQAISMANQLLGLADTI 257


>gi|167579485|ref|ZP_02372359.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
          TXDOH]
          Length = 163

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       YR + + F   +  +
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YRARDVDFSSTLARA 52


>gi|163758033|ref|ZP_02165121.1| hypothetical protein HPDFL43_00370 [Hoeflea phototrophica DFL-43]
 gi|162284322|gb|EDQ34605.1| hypothetical protein HPDFL43_00370 [Hoeflea phototrophica DFL-43]
          Length = 487

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 8/72 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  + + A + L+  S +  I+S NIANA      P    Y R+  +    ++G+  V +
Sbjct: 3  LTTAINTAQTSLSNTSTQTNIVSRNIANA----SNPD---YNRRNAALSTNVYGAQVVSI 55

Query: 64 KKIGVDQSTFVE 75
          ++   DQ+ F +
Sbjct: 56 QR-AQDQALFQQ 66


>gi|327480026|gb|AEA83336.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri DSM
          4166]
          Length = 685

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 24/70 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +     I  SGLA    ++ I   NI N  T G +        ++  F    +   G  +
Sbjct: 1  MADLLSIGLSGLAASKTQLSITGHNITNVNTPGYSRQDATQATRSPQFSGAGYIGSGTTL 60

Query: 64 KKIGVDQSTF 73
            +    S F
Sbjct: 61 VDVRRTYSEF 70


>gi|323498414|ref|ZP_08103410.1| flagellar hook-associated protein FlgK [Vibrio sinaloensis DSM
          21326]
 gi|323316487|gb|EGA69502.1| flagellar hook-associated protein FlgK [Vibrio sinaloensis DSM
          21326]
          Length = 624

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 8/69 (11%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          + S L  Q   +     NI+NA T G       Y R+++     M    G     +GV  
Sbjct: 10 SQSVLTAQRQ-LNTTGHNISNANTEG-------YSRQSVIQGTNMPRQFGGETYGMGVHV 61

Query: 71 STFVEEFDP 79
                +D 
Sbjct: 62 EKVRRSWDQ 70


>gi|307945665|ref|ZP_07661001.1| flagellar basal-body rod protein FlgF [Roseibium sp. TrichSKD4]
 gi|307771538|gb|EFO30763.1| flagellar basal-body rod protein FlgF [Roseibium sp. TrichSKD4]
          Length = 246

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 7/44 (15%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          IA S  +    ++ +++ N+AN  T     G   ++ + + FEE
Sbjct: 7  IALSRQSALRNQLNVVANNMANINT-----GG--FKAQRLLFEE 43



 Score = 34.5 bits (79), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NV  +VE   + E  R Y    + IK + ++    +  L R
Sbjct: 196 QGAIEQSNVEGVVEVTRLIEITRAYTTVSKMIKDADELRQKAISTLGR 243


>gi|167568104|ref|ZP_02361020.1| flagellar basal body rod protein FlgB [Burkholderia oklahomensis
          EO147]
 gi|167574222|ref|ZP_02367096.1| flagellar basal body rod protein FlgB [Burkholderia oklahomensis
          C6786]
          Length = 163

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       YR + + F   +  +
Sbjct: 15 ALDVRTYRQELLSSNIANADTPG-------YRARDVDFSSTLARA 52


>gi|99082780|ref|YP_614934.1| flagellar hook-associated protein FlgK [Ruegeria sp. TM1040]
 gi|99039060|gb|ABF65672.1| Flagellar hook-associated protein 1 (HAP1) [Ruegeria sp. TM1040]
          Length = 482

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 8/65 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L  +   A +G+   S    +IS+N+ANA + G       Y R+T+        +GGVR+
Sbjct: 3  LSTALSSAMTGITAASRSTSVISDNLANALSEG-------YYRRTLDLSSN-GAAGGVRI 54

Query: 64 KKIGV 68
            +  
Sbjct: 55 GSVQR 59


>gi|328545572|ref|YP_004305681.1| flagellar hook-associated protein [polymorphum gilvum
          SL003B-26A1]
 gi|326415313|gb|ADZ72376.1| Flagellar hook-associated protein [Polymorphum gilvum
          SL003B-26A1]
          Length = 459

 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--SFEEVMHGS 58
          M  L A+  IA S LA    ++ I + N+ANA T G       Y RKT            
Sbjct: 1  MTTLAAAGLIATSSLASTQVQLSIAANNVANADTEG-------YTRKTASSVALTTAGTG 53

Query: 59 GGVRVKKI 66
           GV V KI
Sbjct: 54 SGVTVGKI 61


>gi|255021355|ref|ZP_05293403.1| Flagellar basal-body rod protein flgF [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969218|gb|EET26732.1| Flagellar basal-body rod protein flgF [Acidithiobacillus caldus
           ATCC 51756]
          Length = 246

 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 18/57 (31%), Gaps = 7/57 (12%)

Query: 83  VANASGIV-------KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            A   G V       +  NVN +     M + +R +    + ++           +L
Sbjct: 187 AAPEDGKVVLESGALEGSNVNPIHAMVQMLQDSRQFEMQTKLMQTISQDRDAANQIL 243


>gi|167648226|ref|YP_001685889.1| hypothetical protein Caul_4270 [Caulobacter sp. K31]
 gi|167350656|gb|ABZ73391.1| protein of unknown function DUF1078 domain protein [Caulobacter sp.
           K31]
          Length = 77

 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 16/38 (42%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +++  E  +       + AN    K + +M    LD++
Sbjct: 39  IDLAHEAVEQISAKTDFKANAAVAKTADEMTGALLDII 76


>gi|332140552|ref|YP_004426290.1| flagellar hook-associated protein FlgK [Alteromonas macleodii
          str. 'Deep ecotype']
 gi|327550574|gb|AEA97292.1| flagellar hook-associated protein FlgK [Alteromonas macleodii
          str. 'Deep ecotype']
          Length = 680

 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTG 36
            +A SG+   S  +Q  S NIAN  T G
Sbjct: 7  FSLATSGVNASSKLLQTTSNNIANVNTPG 35


>gi|291617021|ref|YP_003519763.1| FlgF [Pantoea ananatis LMG 20103]
 gi|291152051|gb|ADD76635.1| FlgF [Pantoea ananatis LMG 20103]
          Length = 252

 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I   ++       LL
Sbjct: 204 GVLEGSNVKPVETMVDMIANARRFEMQMKVISNVNENEQKANQLL 248


>gi|262173355|ref|ZP_06041032.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451]
 gi|261890713|gb|EEY36700.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451]
          Length = 243

 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 16/39 (41%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            V+  NV+ + E   +    R +   ++ +K +  +   
Sbjct: 197 HVEGSNVSAVDELLSVMSLTRNFEMQVRMMKSAETLAQA 235


>gi|188534164|ref|YP_001907961.1| flagellar hook-associated protein FlgK [Erwinia tasmaniensis
          Et1/99]
 gi|188029206|emb|CAO97078.1| Flagellar hook-filament junction protein 1 [Erwinia tasmaniensis
          Et1/99]
          Length = 551

 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 26/76 (34%), Gaps = 7/76 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    + A +GL   SA +   S NI N   TG       Y R+T    +      G   
Sbjct: 1  MANLINTAMTGLNAASAALNTTSNNITNYAVTG-------YSRQTTVLAQNSSTLSGSNY 53

Query: 64 KKIGVDQSTFVEEFDP 79
             G   S    E+D 
Sbjct: 54 YGNGASVSNVYREYDQ 69


>gi|254294559|ref|YP_003060582.1| flagellar hook-associated protein FlgK [Hirschia baltica ATCC
          49814]
 gi|254043090|gb|ACT59885.1| flagellar hook-associated protein FlgK [Hirschia baltica ATCC
          49814]
          Length = 714

 Score = 34.5 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 9/61 (14%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE--VMHGSGGVRV 63
          +    + S L    + +  +S N+AN  T G       Y R    F     + GS GV V
Sbjct: 5  SIMATSLSALRANQSALSTVSTNVANVNTEG-------YTRLDTHFNSLGAVSGSFGVEV 57

Query: 64 K 64
          K
Sbjct: 58 K 58


>gi|288940415|ref|YP_003442655.1| flagellar hook-associated protein FlgK [Allochromatium vinosum DSM
           180]
 gi|288895787|gb|ADC61623.1| flagellar hook-associated protein FlgK [Allochromatium vinosum DSM
           180]
          Length = 723

 Score = 34.5 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              VN+  E A+M    + Y A  Q I  S +M  T L+ +R
Sbjct: 681 LSGVNLDEEAANMIRFQQAYRAAAQVITTSGEMFDTLLNAVR 722


>gi|299534790|ref|ZP_07048120.1| flagellar basal body rod protein FlgB [Lysinibacillus fusiformis
          ZC1]
 gi|298729878|gb|EFI70423.1| flagellar basal body rod protein FlgB [Lysinibacillus fusiformis
          ZC1]
          Length = 130

 Score = 34.5 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 18/76 (23%)

Query: 24 IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
           I+ NIAN  T         Y+ K +SF++++     + +     D       +D     
Sbjct: 24 TIANNIANVDTPN-------YKAKNVSFKDMLEEQKSIAISAYRTDN----RHYDFTFRQ 72

Query: 84 ANASGIVKYPNVNVLV 99
          A        P VN++ 
Sbjct: 73 A-------TPGVNIVE 81


>gi|260466622|ref|ZP_05812810.1| flagellar basal body rod protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259029628|gb|EEW30916.1| flagellar basal body rod protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 126

 Score = 34.5 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 44/123 (35%), Gaps = 24/123 (19%)

Query: 18  QSARMQI----ISENIANARTTG-DTPGSDPYR----RKTISFEEVMHGSGGVRVKKIGV 68
           Q+  + +    I+ NIANA T G      +P+     R  +S +    G  G      G 
Sbjct: 13  QAQWLAVRQSAIAGNIANANTPGYTANDVEPFEKVLDRAAVSLQATQAGHLGSAATNAG- 71

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLV---ETADMRETNRLYMANLQTIKQSHDMM 125
               F  +     P  +  G V  P+ N +V   +     E  R +  N   +K  H MM
Sbjct: 72  ----FAIK-----PQED-DG-VVMPSKNSVVLEDQLLKAGEVRRSFELNTAIVKAFHSMM 120

Query: 126 TTT 128
              
Sbjct: 121 MMA 123


>gi|15895434|ref|NP_348783.1| flagellar basal body rod protein FlgB [Clostridium acetobutylicum
          ATCC 824]
 gi|15025158|gb|AAK80123.1|AE007716_12 Flagellar basal-body rod protein FlgB [Clostridium acetobutylicum
          ATCC 824]
 gi|325509580|gb|ADZ21216.1| flagellar basal body rod protein FlgB [Clostridium acetobutylicum
          EA 2018]
          Length = 134

 Score = 34.5 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          GL   S R + IS NIAN  T         Y+R  +SFE+ +  S
Sbjct: 20 GLDATSERGKAISNNIANVNT-------KDYKRYYVSFEDNLKNS 57


>gi|167835112|ref|ZP_02461995.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           MSMB43]
          Length = 253

 Score = 34.5 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 8/60 (13%)

Query: 80  GHPVANASGIVK-------YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+P A+A   VK         NVN +     M +  R +    + I+ +         LL
Sbjct: 192 GNP-ADADAAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSADQNEQAANQLL 250



 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 16/66 (24%)

Query: 1  MDYLI-ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM---- 55
          MD LI  +   A   L  QS    +++ N+ANA TTG       +R +  +F  V     
Sbjct: 1  MDRLIYTAMTGAAQSLEQQS----VVANNLANASTTG-------FRAQLATFRAVPMNFD 49

Query: 56 HGSGGV 61
           GSG V
Sbjct: 50 DGSGNV 55


>gi|116694220|ref|YP_728431.1| flagellar basal body rod protein FlgF [Ralstonia eutropha H16]
 gi|113528719|emb|CAJ95066.1| flagellar basal body rod protein [Ralstonia eutropha H16]
          Length = 247

 Score = 34.5 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG ++  NVN      +M    R +   ++ I+ +         LL
Sbjct: 199 SGALEGSNVNPTEAMVEMIANARRFEMQMKMIQGADGNEQRANQLL 244


>gi|332092842|gb|EGI97910.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 155-74]
          Length = 123

 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG ++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 75  SGGLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 120


>gi|327393472|dbj|BAK10894.1| flagellar basal-body rod protein FlgF [Pantoea ananatis AJ13355]
          Length = 252

 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I   ++       LL
Sbjct: 204 GVLEGSNVKPVETMVDMIANARRFEMQMKVISNVNENEQKANQLL 248


>gi|71907892|ref|YP_285479.1| flagellar basal-body rod protein FlgB [Dechloromonas aromatica
          RCB]
 gi|71847513|gb|AAZ47009.1| Flagellar basal-body rod protein FlgB [Dechloromonas aromatica
          RCB]
          Length = 153

 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 9/43 (20%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          G+     ++  I+ NIANA T G       Y+   I FEE M 
Sbjct: 33 GVRAYRQQL--IASNIANADTPG-------YKAVDIDFEEAMR 66


>gi|330827754|ref|YP_004390706.1| RNA-binding protein [Aeromonas veronii B565]
 gi|328802890|gb|AEB48089.1| RNA-binding protein [Aeromonas veronii B565]
          Length = 154

 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 9/69 (13%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           ++E+IAN  T     G+ PYR   I+  E+    G V   ++  D++T            
Sbjct: 53  VAESIANQETCTLYVGNLPYRANEIAVRELFAEQGQVISVRLMKDKATGKRR-------- 104

Query: 85  NASGIVKYP 93
              G V+ P
Sbjct: 105 -GFGFVEMP 112


>gi|315296704|gb|EFU55999.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 16-3]
          Length = 138

 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-----HGSGGVRVKKI--- 66
           L  Q    ++++ NIANA T G       Y+ + I F   +      G     V  +   
Sbjct: 18  LRAQRQ--EVLAANIANADTPG-------YQARDIDFASELKKVMQRGRDATSVVALTMT 68

Query: 67  --------GVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                    +   T   ++  P  P  + +       V++  E     + +  Y  +L  
Sbjct: 69  STQHIPAQALTPPTAELQYRIPDQPSLDGN------TVDMDRERTQFADNSLQYQMSLSV 122

Query: 118 IK-QSHDMMT 126
           +  Q   MM 
Sbjct: 123 LSGQIKGMMN 132


>gi|330808196|ref|YP_004352658.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376304|gb|AEA67654.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 245

 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 20/48 (41%), Gaps = 3/48 (6%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH---DMMTTTLDL 131
           SG  +  NVN + E   +    + +  +++ +  +    + M   L +
Sbjct: 198 SGFQEASNVNAVDEMTSVLALAKQFELHVKMMNTAKEGDEAMARVLQI 245


>gi|188589304|ref|YP_001920228.1| flagellar basal body rod protein FlgG [Clostridium botulinum E3
           str. Alaska E43]
 gi|188499585|gb|ACD52721.1| flagellar hook-basal body complex protein FlhP [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 256

 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 17/38 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             G+++  NV+      D+  T R +  + + I  + +
Sbjct: 209 EQGMLEGSNVDTAEIFTDIISTQRAFQLSSKGITTADE 246


>gi|157373206|ref|YP_001471806.1| flagellar basal-body rod protein FlgF [Shewanella sediminis
           HAW-EB3]
 gi|157315580|gb|ABV34678.1| flagellar basal-body rod protein FlgF [Shewanella sediminis
           HAW-EB3]
          Length = 244

 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            SG ++  NV  + E     + +R +   ++ +K +  +      LLR+
Sbjct: 195 DSGFLESSNVKAVSELIASMDLSRQFEVQVKLMKSAEKLAEAGNRLLRN 243


>gi|187925760|ref|YP_001897402.1| flagellar basal body rod protein FlgF [Burkholderia phytofirmans
           PsJN]
 gi|187716954|gb|ACD18178.1| flagellar basal-body rod protein FlgF [Burkholderia phytofirmans
           PsJN]
          Length = 252

 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           DP   +A AS  ++  NVN +     M    R +    + ++ +     +   LL
Sbjct: 197 DPAVTLAPAS--LEGSNVNPVSAMVSMITNARQFQMQTKLLESADKNDQSANQLL 249


>gi|16799765|ref|NP_470033.1| flagellar basal body rod protein FlgG [Listeria innocua Clip11262]
 gi|16413142|emb|CAC95922.1| lin0690 [Listeria innocua Clip11262]
 gi|313620081|gb|EFR91589.1| flagellar basal body rod protein FlgG [Listeria innocua FSL S4-378]
          Length = 259

 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ VE   + +  R+  A+   + 
Sbjct: 210 QNGVLETSNVDLGVEMVQLMDNQRMVQASKNVVN 243


>gi|321445153|gb|EFX60611.1| hypothetical protein DAPPUDRAFT_342411 [Daphnia pulex]
          Length = 136

 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 9/42 (21%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          L  +  R+  ++ NIANA T G       Y+ + + F   + 
Sbjct: 18 LRSERQRL--LASNIANADTPG-------YKARDMDFASALR 50


>gi|121596124|ref|YP_988020.1| flagellar hook-associated protein FlgK [Acidovorax sp. JS42]
 gi|120608204|gb|ABM43944.1| flagellar hook-associated protein FlgK [Acidovorax sp. JS42]
          Length = 691

 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 14/79 (17%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++  ++    L      +Q    NIAN  T G       Y R+ +  E V          
Sbjct: 1  MSLLNVGARALLANQVALQTTGHNIANVSTAG-------YSRQNVGMETVQGQFTGSGYI 53

Query: 58 SGGVRVKKIGVDQSTFVEE 76
            GV+V  I  + +  +  
Sbjct: 54 GNGVQVATILRNHNELLTR 72


>gi|323698499|ref|ZP_08110411.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. ND132]
 gi|323458431|gb|EGB14296.1| flagellar basal-body rod protein FlgB [Desulfovibrio
          desulfuricans ND132]
          Length = 136

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 8/59 (13%)

Query: 1  MDYLIA-SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L   + ++    + ++  R  I++ NIAN  T G       Y+ + + FEE +  +
Sbjct: 1  MRGLFEHNLNVTAKVMDLRLERQNIVTGNIANVNTPG-------YKARRLEFEERLQSA 52


>gi|188592118|ref|YP_001796716.1| flagellar basal body rod protein flgf [Cupriavidus taiwanensis LMG
           19424]
 gi|170938492|emb|CAP63479.1| Flagellar basal-body rod protein flgF [Cupriavidus taiwanensis LMG
           19424]
          Length = 247

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG ++  NVN      +M    R +   ++ I+ +         LL
Sbjct: 199 SGALEGSNVNPTEAMVEMIANARRFEMQMKMIQGADGNEQRANQLL 244


>gi|167579489|ref|ZP_02372363.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           TXDOH]
          Length = 253

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 15/42 (35%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +     M +  R +    + I+ +         LL
Sbjct: 209 EGSNVNPVAAMVSMIDNARAFELQTKLIQSADQNEQAANQLL 250



 Score = 33.7 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 12/64 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          MD LI       + +   +  ++   +++ N+ANA TTG       +R   ++FE    G
Sbjct: 1  MDRLIY------TAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFE---DG 51

Query: 58 SGGV 61
          SG V
Sbjct: 52 SGNV 55


>gi|104782836|ref|YP_609334.1| flagellar hook-associated protein FlgK [Pseudomonas entomophila
          L48]
 gi|95111823|emb|CAK16547.1| flagellar hook-associated protein FlgK [Pseudomonas entomophila
          L48]
          Length = 681

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  +I  SGL    + M  +  NIANA         + Y R+ I  +       G   
Sbjct: 1  MASLINIGMSGLGAAQSGMYTLGNNIANADV-------ESYSRQQIVQKTKGSQQVGQVF 53

Query: 64 KKIGVDQSTFVEEFD 78
             G   +     ++
Sbjct: 54 IGTGTTLADVRRVYN 68


>gi|260767920|ref|ZP_05876854.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP
          102972]
 gi|260615950|gb|EEX41135.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP
          102972]
 gi|315179623|gb|ADT86537.1| flagellar basal body rod protein [Vibrio furnissii NCTC 11218]
          Length = 120

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 7/46 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           L  +  R ++++ N+AN  T G       Y  K ++F+ VM  +G
Sbjct: 15 ALNFRVQRTKVLASNLANVDTPG-------YLAKDLTFKTVMSTAG 53


>gi|332162900|ref|YP_004299477.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|325667130|gb|ADZ43774.1| Flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330863350|emb|CBX73473.1| hypothetical protein YEW_ES20680 [Yersinia enterocolitica W22703]
          Length = 243

 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N++ + E       +R + A ++ +K + ++  +   ++R
Sbjct: 201 SNISAISEMTASISLSRQFEAQIKMMKVAEELAQSGNRIIR 241


>gi|323492337|ref|ZP_08097490.1| flagellar basal body rod protein [Vibrio brasiliensis LMG 20546]
 gi|323313384|gb|EGA66495.1| flagellar basal body rod protein [Vibrio brasiliensis LMG 20546]
          Length = 243

 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 17/39 (43%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            ++  NV+ + E  ++    R +   ++ +K +  +   
Sbjct: 197 HIEGSNVSAIDELLNVMSLTRNFEMQVRMMKTAETLAQA 235


>gi|266621921|ref|ZP_06114856.1| flagellar basal-body rod protein FlgB [Clostridium hathewayi DSM
           13479]
 gi|288866394|gb|EFC98692.1| flagellar basal-body rod protein FlgB [Clostridium hathewayi DSM
           13479]
          Length = 118

 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 43/117 (36%), Gaps = 27/117 (23%)

Query: 3   YLI--ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----H 56
            L   A+     SGL     + Q+   NIAN  T G       ++ K + F++V+     
Sbjct: 2   PLFEDAAFRALQSGLDAMWLKQQVAGHNIANVETPG-------FKAKKVEFKQVLKEAAD 54

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
           GSG V    +G D  T           A   G     NV V  E  D+ +    Y A
Sbjct: 55  GSGPVYKAVVGTDNDT----------EARPDGN----NVQVEKEELDLWKAYTEYSA 97


>gi|83720527|ref|YP_440802.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           E264]
 gi|167617586|ref|ZP_02386217.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           Bt4]
 gi|257140547|ref|ZP_05588809.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           E264]
 gi|83654352|gb|ABC38415.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           E264]
          Length = 253

 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 15/42 (35%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +     M +  R +    + I+ +         LL
Sbjct: 209 EGSNVNPVAAMVSMIDNARAFELQTKLIQSADQNEQAANQLL 250



 Score = 33.7 bits (77), Expect = 8.7,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 12/64 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          MD LI       + +   +  ++   +++ N+ANA TTG       +R   ++FE    G
Sbjct: 1  MDRLIY------TAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFE---DG 51

Query: 58 SGGV 61
          SG V
Sbjct: 52 SGNV 55


>gi|54297179|ref|YP_123548.1| flagellar basal body rod protein FlgB [Legionella pneumophila str.
           Paris]
 gi|148358803|ref|YP_001250010.1| flagellar basal body rod protein FlgB [Legionella pneumophila str.
           Corby]
 gi|296106848|ref|YP_003618548.1| flagellar basal-body rod protein FlgB [Legionella pneumophila
           2300/99 Alcoy]
 gi|53750964|emb|CAH12375.1| Flagellar basal-body rod protein FlgB [Legionella pneumophila str.
           Paris]
 gi|148280576|gb|ABQ54664.1| flagellar basal body rod protein FlgB [Legionella pneumophila str.
           Corby]
 gi|295648749|gb|ADG24596.1| flagellar basal-body rod protein FlgB [Legionella pneumophila
           2300/99 Alcoy]
          Length = 130

 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 22/135 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGV 61
           L +   I    L  +  R  +++ NIAN  T         ++ + + F EV+    +G  
Sbjct: 5   LDSYFGIHAKALIARDQRASVLANNIANVNTPN-------FKARDVDFNEVLTATMAGNS 57

Query: 62  RVKKIGVDQ-----STFV--EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  ++  DQ     + F+   ++   H  A+  G      V+  +ET +       Y A+
Sbjct: 58  QQLRVTSDQHISTNADFMTHLKYRMTH-HASLDGN----TVDKDMETTEFARNALNYQAS 112

Query: 115 LQTIK-QSHDMMTTT 128
           L  +  +   M+T  
Sbjct: 113 LSFLNGKIKSMLTAL 127


>gi|332088753|gb|EGI93865.1| flagellar basal-body rod protein FlgB [Shigella boydii 5216-82]
          Length = 138

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-----HGSGGVRVKKI--- 66
           L  Q    ++++ NIANA T G       Y+ + I F   +      G     V  +   
Sbjct: 18  LRAQRQ--EVLAANIANADTPG-------YQARDIDFASELKKVMQRGRDATSVVALTMT 68

Query: 67  --------GVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                    +   T   ++  P  P  + +       V++  E     + +  Y  +L  
Sbjct: 69  STQHIPAQALTPPTAELQYRIPDQPSLDGN------TVDMDRERTQFADNSLQYQMSLSA 122

Query: 118 IK-QSHDMMT 126
           +  Q   MM 
Sbjct: 123 LSGQIKGMMN 132


>gi|167568108|ref|ZP_02361024.1| flagellar basal body rod protein FlgF [Burkholderia oklahomensis
           EO147]
 gi|167574226|ref|ZP_02367100.1| flagellar basal body rod protein FlgF [Burkholderia oklahomensis
           C6786]
          Length = 253

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 15/42 (35%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +     M +  R +    + I+ +         LL
Sbjct: 209 EGSNVNPVAAMVSMIDNARAFELQTKLIQSADQNEQAANQLL 250


>gi|307720252|ref|YP_003891392.1| flagellar basal-body rod protein FlgB [Sulfurimonas autotrophica
          DSM 16294]
 gi|306978345|gb|ADN08380.1| flagellar basal-body rod protein FlgB [Sulfurimonas autotrophica
          DSM 16294]
          Length = 143

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 13/55 (23%)

Query: 7  SAHIANS-GLAVQSA-----RMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          S  I+ +  L  ++      R  +IS NIANA T         Y+ + ISFE+ +
Sbjct: 2  SIEISKTHALLAKALDYRAARQDMISSNIANADT-------PYYKPRDISFEDAL 49


>gi|168234100|ref|ZP_02659158.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194469067|ref|ZP_03075051.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194455431|gb|EDX44270.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205331910|gb|EDZ18674.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 138

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 40/128 (31%), Gaps = 29/128 (22%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--------SGGVRVKKI 66
           L  Q    +I++ NIANA T G       Y+ + I F   +          +GGV +   
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFASELKKVMVRGREETGGVALSLT 68

Query: 67  GVDQSTFVEEFDPG------HPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTI- 118
                       P        P   +  G      V++  E     + +  Y   L  + 
Sbjct: 69  SSHHIPAQAVSSPAVDLLYRVPDQPSLDGN----TVDMDRERTQFADNSLKYQMGLTVLG 124

Query: 119 KQSHDMMT 126
            Q   MM 
Sbjct: 125 SQLKGMMN 132


>gi|220917708|ref|YP_002493012.1| flagellar hook-associated protein FlgK [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955562|gb|ACL65946.1| flagellar hook-associated protein FlgK [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 469

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E  +M +  R Y A  + I+ S +M  T L L
Sbjct: 430 SGVSVDEELLEMEKAQRAYDAISKVIQASSEMFDTLLKL 468


>gi|103488393|ref|YP_617954.1| flagellar hook-associated protein [Sphingopyxis alaskensis
          RB2256]
 gi|98978470|gb|ABF54621.1| Flagellar hook-associated protein [Sphingopyxis alaskensis
          RB2256]
          Length = 441

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 10/57 (17%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +     I  SGL   S  +  I +NIANA+T G       Y R+ +   E+M   GG
Sbjct: 1  MSDLLGIGYSGLKAYSRALSTIGDNIANAQTPG-------YARRRL---EMMEAVGG 47


>gi|53717915|ref|YP_106901.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           K96243]
 gi|53724566|ref|YP_104799.1| flagellar basal body rod protein FlgF [Burkholderia mallei ATCC
           23344]
 gi|67641539|ref|ZP_00440316.1| flagellar basal-body rod protein FlgF [Burkholderia mallei GB8
           horse 4]
 gi|121600078|ref|YP_994292.1| flagellar basal body rod protein FlgF [Burkholderia mallei SAVP1]
 gi|124385734|ref|YP_001028059.1| flagellar basal body rod protein FlgF [Burkholderia mallei NCTC
           10229]
 gi|126438677|ref|YP_001057323.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           668]
 gi|126449756|ref|YP_001082866.1| flagellar basal body rod protein FlgF [Burkholderia mallei NCTC
           10247]
 gi|134283591|ref|ZP_01770290.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           305]
 gi|167001538|ref|ZP_02267333.1| flagellar basal-body rod protein FlgF [Burkholderia mallei PRL-20]
 gi|167717661|ref|ZP_02400897.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           DM98]
 gi|167813803|ref|ZP_02445483.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           91]
 gi|167843909|ref|ZP_02469417.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           B7210]
 gi|167892411|ref|ZP_02479813.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           7894]
 gi|167900909|ref|ZP_02488114.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           NCTC 13177]
 gi|167917165|ref|ZP_02504256.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           BCC215]
 gi|217425035|ref|ZP_03456531.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           576]
 gi|237810462|ref|YP_002894913.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           MSHR346]
 gi|254174652|ref|ZP_04881313.1| flagellar basal-body rod protein FlgF [Burkholderia mallei ATCC
           10399]
 gi|254182139|ref|ZP_04888736.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1655]
 gi|254188069|ref|ZP_04894581.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254201897|ref|ZP_04908261.1| flagellar basal-body rod protein FlgF [Burkholderia mallei FMH]
 gi|254207231|ref|ZP_04913582.1| flagellar basal-body rod protein FlgF [Burkholderia mallei JHU]
 gi|254359733|ref|ZP_04976004.1| flagellar basal-body rod protein FlgF [Burkholderia mallei
           2002721280]
 gi|52208329|emb|CAH34262.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243]
 gi|52427989|gb|AAU48582.1| flagellar basal-body rod protein FlgF [Burkholderia mallei ATCC
           23344]
 gi|121228888|gb|ABM51406.1| flagellar basal-body rod protein FlgF [Burkholderia mallei SAVP1]
 gi|124293754|gb|ABN03023.1| flagellar basal-body rod protein FlgF [Burkholderia mallei NCTC
           10229]
 gi|126218170|gb|ABN81676.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           668]
 gi|126242626|gb|ABO05719.1| flagellar basal-body rod protein FlgF [Burkholderia mallei NCTC
           10247]
 gi|134245000|gb|EBA45095.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           305]
 gi|147747791|gb|EDK54867.1| flagellar basal-body rod protein FlgF [Burkholderia mallei FMH]
 gi|147752773|gb|EDK59839.1| flagellar basal-body rod protein FlgF [Burkholderia mallei JHU]
 gi|148028947|gb|EDK86879.1| flagellar basal-body rod protein FlgF [Burkholderia mallei
           2002721280]
 gi|157935749|gb|EDO91419.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160695697|gb|EDP85667.1| flagellar basal-body rod protein FlgF [Burkholderia mallei ATCC
           10399]
 gi|184212677|gb|EDU09720.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1655]
 gi|217392055|gb|EEC32081.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           576]
 gi|237502787|gb|ACQ95105.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           MSHR346]
 gi|238522490|gb|EEP85934.1| flagellar basal-body rod protein FlgF [Burkholderia mallei GB8
           horse 4]
 gi|243062739|gb|EES44925.1| flagellar basal-body rod protein FlgF [Burkholderia mallei PRL-20]
          Length = 253

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 15/42 (35%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +     M +  R +    + I+ +         LL
Sbjct: 209 EGSNVNPVAAMVSMIDNARAFELQTKLIQSADQNEQAANQLL 250



 Score = 33.7 bits (77), Expect = 9.2,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 12/64 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          MD LI       + +   +  ++   +++ N+ANA TTG       +R   ++FE    G
Sbjct: 1  MDRLIY------TAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFE---DG 51

Query: 58 SGGV 61
          SG V
Sbjct: 52 SGNV 55


>gi|313624924|gb|EFR94832.1| flagellar basal body rod protein FlgG [Listeria innocua FSL J1-023]
          Length = 259

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +G+++  NV++ VE   + +  R+  A+   + 
Sbjct: 210 QNGVLETSNVDLGVEMVQLMDNQRMVQASKNVVN 243


>gi|255021354|ref|ZP_05293402.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756]
 gi|254969217|gb|EET26731.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756]
          Length = 419

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 7/92 (7%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSG- 59
          + +   A SGL   +  +Q++  NI+NA T G    +   +D Y    +         G 
Sbjct: 1  MGAFSTALSGLQAANTDLQVLGNNISNANTVGFKSSNAEFADAYGAALVGSAPTYGQVGI 60

Query: 60 GVRVKKIGV--DQSTFVEEFDPGHPVANASGI 89
          G RV  +     Q       +P     N +G 
Sbjct: 61 GTRVMTVAQQFTQGNIQTTNNPLDVAINGNGF 92


>gi|222530142|ref|YP_002574024.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          bescii DSM 6725]
 gi|222456989|gb|ACM61251.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          bescii DSM 6725]
          Length = 133

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 7/35 (20%)

Query: 24 IISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          IIS NIANA T G       Y+ K ++F   +  S
Sbjct: 24 IISNNIANADTPG-------YKAKDLNFRAFLQRS 51


>gi|197104382|ref|YP_002129759.1| flagellar basal-body rod protein FlgF [Phenylobacterium zucineum
           HLK1]
 gi|196477802|gb|ACG77330.1| flagellar basal-body rod protein FlgF [Phenylobacterium zucineum
           HLK1]
          Length = 245

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 82  PVANA---SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           P A A    G+++  NV  ++E   M E +R Y    + I    D+   +++
Sbjct: 188 PAAEARLRQGMLEGSNVQAILEITRMVEVSRAYERTNRMIDSEADLSRRSVE 239


>gi|76808961|ref|YP_331880.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           1710b]
 gi|126452329|ref|YP_001064565.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           1106a]
 gi|167736704|ref|ZP_02409478.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           14]
 gi|167822319|ref|ZP_02453790.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei 9]
 gi|167909128|ref|ZP_02496219.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           112]
 gi|226199728|ref|ZP_03795279.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           Pakistan 9]
 gi|242314788|ref|ZP_04813804.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1106b]
 gi|254196477|ref|ZP_04902901.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           S13]
 gi|254260132|ref|ZP_04951186.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1710a]
 gi|254295815|ref|ZP_04963272.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           406e]
 gi|14091669|gb|AAK53815.1|AF370881_1 flagellar basal-body rod protein [Burkholderia pseudomallei]
 gi|76578414|gb|ABA47889.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1710b]
 gi|126225971|gb|ABN89511.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1106a]
 gi|157805973|gb|EDO83143.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           406e]
 gi|169653220|gb|EDS85913.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           S13]
 gi|225928079|gb|EEH24115.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           Pakistan 9]
 gi|242138027|gb|EES24429.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1106b]
 gi|254218821|gb|EET08205.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1710a]
          Length = 253

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 15/42 (35%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +     M +  R +    + I+ +         LL
Sbjct: 209 EGSNVNPVAAMVSMIDNARAFELQTKLIQSADQNEQAANQLL 250



 Score = 33.7 bits (77), Expect = 9.4,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 12/64 (18%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          MD LI       + +   +  ++   +++ N+ANA TTG       +R   ++FE    G
Sbjct: 1  MDRLIY------TAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFE---DG 51

Query: 58 SGGV 61
          SG V
Sbjct: 52 SGNV 55


>gi|318604253|emb|CBY25751.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 243

 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            N++ + E       +R + A ++ +K + ++  +   ++R
Sbjct: 201 SNISAISEMTASISLSRQFEAQIKMMKVAEELAQSGNRIIR 241


>gi|310641540|ref|YP_003946298.1| flagellar basal-body rod protein flgb [Paenibacillus polymyxa SC2]
 gi|309246490|gb|ADO56057.1| Flagellar basal-body rod protein FlgB [Paenibacillus polymyxa SC2]
          Length = 135

 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 18/127 (14%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPY-RRKTISFEEVMHGSGGVRVKKIGVDQST 72
           G+   + R +++++NI+NA T        PY +R  +SFEE++       V  +    + 
Sbjct: 15  GVQAANTRQRVMADNISNADT--------PYFKRSEVSFEELLQQQMDGDVTPLRGKVTN 66

Query: 73  FVE-EFDPGH--PVA--NASGI----VKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
               +  P +  P A     G         NV++  E + M E    Y   +Q I +   
Sbjct: 67  SRHFQIGPVNSIPDATVIKDGYSVMNNNMNNVDIDREMSLMAENQLRYNTYIQEINERIK 126

Query: 124 MMTTTLD 130
           MM T ++
Sbjct: 127 MMRTAVE 133


>gi|297531376|ref|YP_003672651.1| flagellar hook-associated protein FlgK [Geobacillus sp. C56-T3]
 gi|297254628|gb|ADI28074.1| flagellar hook-associated protein FlgK [Geobacillus sp. C56-T3]
          Length = 531

 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 7/49 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
          M         A  G+  Q A +   S NIANA T G       Y R+ +
Sbjct: 1  MLSTFHGLEAARRGMMAQQAALYTTSHNIANANTEG-------YTRQRV 42


>gi|153011527|ref|YP_001372741.1| flagellar basal body rod protein FlgB [Ochrobactrum anthropi ATCC
           49188]
 gi|151563415|gb|ABS16912.1| flagellar basal-body rod protein FlgB [Ochrobactrum anthropi ATCC
           49188]
          Length = 126

 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 40/130 (30%)

Query: 17  VQ--SARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMH----------------G 57
            Q  S R   ++ N+ANA T    P    +R + +  F +V+                 G
Sbjct: 14  AQWLSVRQATVAGNVANANT----PD---FRARDVQPFADVLDKTQLTMAATSPLHLESG 66

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + G+   ++  D  T     +  H     SG      V+V  E     E  R Y  N   
Sbjct: 67  ADGITGARLRPDDIT-----EQTH-----SGN----TVDVEQEMMKAGEIAREYSLNTSI 112

Query: 118 IKQSHDMMTT 127
           +K  H MM +
Sbjct: 113 VKAFHRMMLS 122


>gi|149182500|ref|ZP_01860973.1| flagellar basal-body rod protein B [Bacillus sp. SG-1]
 gi|148849760|gb|EDL63937.1| flagellar basal-body rod protein B [Bacillus sp. SG-1]
          Length = 129

 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 32/120 (26%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M    ++     +GL   SA+ ++IS+NIAN  T         Y+ K+ISF++ ++    
Sbjct: 1   MSLFSSTIQSLENGLNYSSAKQKVISQNIANVDTPN-------YKAKSISFKDQLN---- 49

Query: 61  VRVKKIGVDQSTFV-EEFDPGH---PVANASGIVKYP----------NVNVLVETADMRE 106
                     STF  +  +P H       A+G                V++  E +D+  
Sbjct: 50  -------ESISTFEAKRTNPRHFEFSGRGANGYYIKSQPFQYNHNGNGVDIDKEMSDLAS 102


>gi|149188072|ref|ZP_01866367.1| flagellar hook-associated protein K [Vibrio shilonii AK1]
 gi|148838060|gb|EDL55002.1| flagellar hook-associated protein K [Vibrio shilonii AK1]
          Length = 622

 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 8/69 (11%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          A S L  Q   +     NI+NA T G       Y R+++          G +   +GV  
Sbjct: 10 AQSVLTAQRQ-LNTTGHNISNANTEG-------YSRQSVIQGTNTPRQFGGQTYGMGVHV 61

Query: 71 STFVEEFDP 79
                +D 
Sbjct: 62 ENVRRSWDQ 70


>gi|146278770|ref|YP_001168929.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17025]
 gi|145557011|gb|ABP71624.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17025]
          Length = 476

 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 5/63 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +   A SGL V S  ++  + NIANA T          R   +S         GVRV
Sbjct: 3  ITTALSSALSGLTVTSRGVETAANNIANALT-----EGFARRELEVSARAYGGEGRGVRV 57

Query: 64 KKI 66
            +
Sbjct: 58 VGV 60


>gi|300024587|ref|YP_003757198.1| flagellar hook-associated protein FlgK [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526408|gb|ADJ24877.1| flagellar hook-associated protein FlgK [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 487

 Score = 34.5 bits (79), Expect = 5.4,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 20/36 (55%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           VN+  E  ++ +  R + A+ + I   ++M++T + 
Sbjct: 449 VNLDEEMTNLLDLERTFQASSRLINTVNEMLSTLIQ 484


>gi|222095395|ref|YP_002529455.1| flagellar basal body rod protein flgg [Bacillus cereus Q1]
 gi|221239453|gb|ACM12163.1| flagellar basal-body rod protein [Bacillus cereus Q1]
          Length = 267

 Score = 34.5 bits (79), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 226 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 267


>gi|203284215|ref|YP_002221955.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
 gi|201083658|gb|ACH93249.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
          Length = 135

 Score = 34.5 bits (79), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          MD    S  + +  L V   R  ++++NIAN  T         ++R  ++FE  +  +
Sbjct: 1  MDIFQRSVDLTHRYLDVLGLRQSVVADNIANVDTPN-------FKRSKVTFEAELERA 51


>gi|42522141|ref|NP_967521.1| FlgK, flagellar hook-associated protein [Bdellovibrio bacteriovorus
           HD100]
 gi|39574672|emb|CAE78514.1| FlgK, flagellar hook-associated protein [Bdellovibrio bacteriovorus
           HD100]
          Length = 469

 Score = 34.5 bits (79), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  ET  M E  + Y A+ + IK + +M  T L+L R
Sbjct: 428 SGVSLDEETTKMIEFQKTYDASARLIKTADEMFDTVLNLKR 468


>gi|16764530|ref|NP_460145.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62179691|ref|YP_216108.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161614603|ref|YP_001588568.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553038|ref|ZP_02346788.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167994038|ref|ZP_02575130.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168237256|ref|ZP_02662314.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244773|ref|ZP_02669705.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264033|ref|ZP_02686006.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467126|ref|ZP_02700968.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168822617|ref|ZP_02834617.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194445886|ref|YP_002040428.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194449295|ref|YP_002045173.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194737837|ref|YP_002114173.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197250045|ref|YP_002146869.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262046|ref|ZP_03162120.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|198242083|ref|YP_002215963.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200390920|ref|ZP_03217531.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204930812|ref|ZP_03221685.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205353088|ref|YP_002226889.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857318|ref|YP_002243969.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224584322|ref|YP_002638120.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911006|ref|ZP_04654843.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|120293|sp|P16437|FLGB_SALTY RecName: Full=Flagellar basal-body rod protein flgB; AltName:
           Full=Putative proximal rod protein
 gi|47669|emb|CAA36309.1| unnamed protein product [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|217058|dbj|BAA02861.1| FlgB [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|16419691|gb|AAL20104.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|62127324|gb|AAX65027.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161363967|gb|ABX67735.1| hypothetical protein SPAB_02353 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404549|gb|ACF64771.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407599|gb|ACF67818.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194713339|gb|ACF92560.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630354|gb|EDX48980.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197213748|gb|ACH51145.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197240301|gb|EDY22921.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289757|gb|EDY29118.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197936599|gb|ACH73932.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199603365|gb|EDZ01911.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204320271|gb|EDZ05475.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205272869|emb|CAR37798.1| putative flagellar basal-body rod protein FlgB (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205322410|gb|EDZ10249.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328023|gb|EDZ14787.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205336425|gb|EDZ23189.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205341041|gb|EDZ27805.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347333|gb|EDZ33964.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709121|emb|CAR33454.1| putative flagellar basal-body rod protein FlgB (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224468849|gb|ACN46679.1| flagellar basal body rod protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261246385|emb|CBG24194.1| putative flagellar basal-body rod protein FlgB (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992948|gb|ACY87833.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157715|emb|CBW17207.1| putative flagellar basal-body rod protein FlgB (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312912161|dbj|BAJ36135.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320086386|emb|CBY96159.1| Flagellar basal-body rod protein flgB putative proximal rod protein
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321223792|gb|EFX48855.1| Flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616544|gb|EFY13453.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620515|gb|EFY17379.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622509|gb|EFY19354.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629660|gb|EFY26435.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632620|gb|EFY29366.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636885|gb|EFY33588.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641577|gb|EFY38215.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644067|gb|EFY40613.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650032|gb|EFY46450.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653958|gb|EFY50281.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658490|gb|EFY54752.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663348|gb|EFY59550.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670082|gb|EFY66222.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674854|gb|EFY70945.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676676|gb|EFY72743.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682598|gb|EFY78617.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686649|gb|EFY82628.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322714161|gb|EFZ05732.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129444|gb|ADX16874.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195763|gb|EFZ80939.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198345|gb|EFZ83449.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203171|gb|EFZ88201.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209174|gb|EFZ94111.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209678|gb|EFZ94607.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217866|gb|EGA02581.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222154|gb|EGA06538.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224926|gb|EGA09184.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229668|gb|EGA13791.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232893|gb|EGA16989.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240628|gb|EGA24670.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242942|gb|EGA26963.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250259|gb|EGA34148.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252634|gb|EGA36472.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258838|gb|EGA42491.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261027|gb|EGA44620.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266936|gb|EGA50421.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269977|gb|EGA53426.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326623711|gb|EGE30056.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326628168|gb|EGE34511.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332988065|gb|AEF07048.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 138

 Score = 34.5 bits (79), Expect = 5.5,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 40/128 (31%), Gaps = 29/128 (22%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--------SGGVRVKKI 66
           L  Q    +I++ NIANA T G       Y+ + I F   +          +GGV +   
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFASELKKVMVRGREETGGVALTLT 68

Query: 67  GVDQSTFVEEFDPG------HPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTI- 118
                       P        P   +  G      V++  E     + +  Y   L  + 
Sbjct: 69  SSHHIPAQAVSSPAVDLLYRVPDQPSLDGN----TVDMDRERTQFADNSLKYQMGLTVLG 124

Query: 119 KQSHDMMT 126
            Q   MM 
Sbjct: 125 SQLKGMMN 132


>gi|295678061|ref|YP_003606585.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1002]
 gi|295437904|gb|ADG17074.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1002]
          Length = 166

 Score = 34.5 bits (79), Expect = 5.5,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           + V++ R +++S NIANA T G       Y+ + I F   + G+
Sbjct: 15 AMDVRAYRQELLSSNIANADTPG-------YKARDIDFASSLAGA 52


>gi|212709489|ref|ZP_03317617.1| hypothetical protein PROVALCAL_00531 [Providencia alcalifaciens DSM
           30120]
 gi|212687827|gb|EEB47355.1| hypothetical protein PROVALCAL_00531 [Providencia alcalifaciens DSM
           30120]
          Length = 137

 Score = 34.5 bits (79), Expect = 5.5,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 23/139 (16%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           +D L A+       L+++ AR  +++ NIANA T G       Y+ + I F   +  +  
Sbjct: 2   IDKLDATFAFQQRALSIREARQTVLASNIANADTPG-------YQARDIDFNRQLQQAMD 54

Query: 59  GGVRVKKIGVDQSTFVEEFDPGH---PVANASGIVKYP--------NVNVLVETADMRET 107
            GV VK  G+  +   +    GH   P A      + P         V++ VE +   + 
Sbjct: 55  KGV-VKGKGISLAVTAKGHIEGHDMKPAALDLKY-RVPYQTSMDGNTVDMDVERSQFADN 112

Query: 108 NRLYMANLQTIK-QSHDMM 125
              Y A+L  I  Q   M+
Sbjct: 113 TLKYQADLTFINSQVKSML 131


>gi|330501138|ref|YP_004378007.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina NK-01]
 gi|328915424|gb|AEB56255.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina NK-01]
          Length = 243

 Score = 34.5 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ASG ++  NV  + +       NRL+   ++ +K + D+      ++R
Sbjct: 194 ASGYLEASNVGAIDQLVATMSLNRLFETQVKMMKAAEDLSDAGNRMIR 241


>gi|326792655|ref|YP_004310476.1| flagellar hook-associated protein FlgK [Clostridium lentocellum
          DSM 5427]
 gi|326543419|gb|ADZ85278.1| flagellar hook-associated protein FlgK [Clostridium lentocellum
          DSM 5427]
          Length = 645

 Score = 34.5 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 1  MDYLIASAHIANSGL-AVQSARMQIISENIANARTTGDT 38
          M +     ++A SGL A Q   + + S NI NA T G +
Sbjct: 1  MAFF--EFNVALSGLFAAQRG-LHVTSNNITNASTDGYS 36


>gi|242238970|ref|YP_002987151.1| flagellar basal body rod protein [Dickeya dadantii Ech703]
 gi|242131027|gb|ACS85329.1| flagellar basal body rod protein [Dickeya dadantii Ech703]
          Length = 251

 Score = 34.5 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +    DM  + R +   ++ I        +   LL
Sbjct: 204 GVLEGSNVNTVESLVDMIGSARRFEMQMKVIASVDQNAESANKLL 248


>gi|107023952|ref|YP_622279.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia
          AU 1054]
 gi|116691039|ref|YP_836662.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia
          HI2424]
 gi|170734373|ref|YP_001766320.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia
          MC0-3]
 gi|254246966|ref|ZP_04940287.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184]
 gi|105894141|gb|ABF77306.1| Flagellar basal-body rod FlgF [Burkholderia cenocepacia AU 1054]
 gi|116649128|gb|ABK09769.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia
          HI2424]
 gi|124871742|gb|EAY63458.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184]
 gi|169817615|gb|ACA92198.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia
          MC0-3]
          Length = 252

 Score = 34.5 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISF 51
          MD LI       + +   S  +    I++ N+ANA TTG       YR   ++F
Sbjct: 1  MDRLIY------TAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNF 48



 Score = 33.7 bits (77), Expect = 7.7,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 16/42 (38%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +     M +  R +    + I+ +     T   LL
Sbjct: 208 EGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQTANQLL 249


>gi|260752892|ref|YP_003225785.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp.
          mobilis NCIMB 11163]
 gi|258552255|gb|ACV75201.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp.
          mobilis NCIMB 11163]
          Length = 458

 Score = 34.1 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 11/79 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-- 61
          +     I  SG+      + +I EN++NA TTG       Y R+ +S  E  +G  G+  
Sbjct: 1  MSDILQIGASGVLNYGKAIDVIGENVSNASTTG-------YARRDVSLIEAPNGGSGILG 53

Query: 62 --RVKKIGVDQSTFVEEFD 78
            +V   GV   +    +D
Sbjct: 54 LNQVSGNGVTTQSVTRAWD 72


>gi|254460299|ref|ZP_05073715.1| flagellar proximal rod protein FlgF [Rhodobacterales bacterium
           HTCC2083]
 gi|206676888|gb|EDZ41375.1| flagellar proximal rod protein FlgF [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 253

 Score = 34.1 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 25/56 (44%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +P      + G ++  NVN +       E+ R +  +++ I  + ++   T  ++R
Sbjct: 195 EPDQRARISQGFLESSNVNTITALVKNIESQRKFEMSVKFISLAQEIDEGTSRIMR 250


>gi|203287754|ref|YP_002222769.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
 gi|201084974|gb|ACH94548.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
          Length = 135

 Score = 34.1 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          MD    S  + +  L V   R  ++++NIAN  T         ++R  ++FE  +  +
Sbjct: 1  MDIFQRSVDLTHRYLDVLGLRQSVVADNIANVDTPN-------FKRSKVTFEAELERA 51


>gi|115353117|ref|YP_774956.1| flagellar basal body rod protein FlgF [Burkholderia ambifaria AMMD]
 gi|170703097|ref|ZP_02893917.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
           IOP40-10]
 gi|115283105|gb|ABI88622.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria AMMD]
 gi|170131994|gb|EDT00502.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
           IOP40-10]
          Length = 252

 Score = 34.1 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 16/42 (38%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 208 EGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249



 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISF 51
          MD LI       + +   S  +    I++ N+ANA TTG       YR   ++F
Sbjct: 1  MDRLIY------TAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNF 48


>gi|152965588|ref|YP_001361372.1| flagellar hook-associated protein FlgK [Kineococcus radiotolerans
           SRS30216]
 gi|151360105|gb|ABS03108.1| flagellar hook-associated protein FlgK [Kineococcus radiotolerans
           SRS30216]
          Length = 482

 Score = 34.1 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E  ++      Y A  + +    + + + L+++R
Sbjct: 442 SGVNLDEEMTNLVAYQHAYSAAAKVLTTMDEALQSLLNMVR 482



 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 18/75 (24%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-----------SFEE 53
           +  + A+  L      M+   +NIAN  T G       Y R+ +            F +
Sbjct: 4  FSGINTASRALGAAQRGMETTGQNIANVNTPG-------YSRQRVEQSSSVLNQTGQFTQ 56

Query: 54 VMHGSGGVRVKKIGV 68
                GV V  +  
Sbjct: 57 KYVPGDGVVVNGLTR 71


>gi|254499106|ref|ZP_05111796.1| hypothetical protein LDG_3179 [Legionella drancourtii LLAP12]
 gi|254351645|gb|EET10490.1| hypothetical protein LDG_3179 [Legionella drancourtii LLAP12]
          Length = 408

 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 16/38 (42%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +  NV+   E A++    R++ A  Q +     ++   
Sbjct: 367 EASNVDSTAEFANIVVLQRMFQACSQIMDIDKQLLEEL 404


>gi|332994156|gb|AEF04211.1| flagellar hook-associated protein FlgK [Alteromonas sp. SN2]
          Length = 709

 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTG 36
            +A SG+   S  +Q  S NIAN  T G
Sbjct: 7  FSLATSGVNASSKLLQTTSNNIANVNTPG 35


>gi|319764545|ref|YP_004128482.1| flagellar hook-associated protein flgk [Alicycliphilus
          denitrificans BC]
 gi|317119106|gb|ADV01595.1| flagellar hook-associated protein FlgK [Alicycliphilus
          denitrificans BC]
          Length = 660

 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 14/79 (17%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++  ++    L      +Q    NIAN  T G       Y R++++ + V          
Sbjct: 1  MSLLNVGARALLANQVALQTTGHNIANVSTAG-------YSRQSVAMQTVQGQFTGSGYI 53

Query: 58 SGGVRVKKIGVDQSTFVEE 76
            GV V  I  + +  +  
Sbjct: 54 GNGVNVATILRNHNELLTR 72


>gi|218708810|ref|YP_002416431.1| flagellar hook-associated protein FlgK [Vibrio splendidus LGP32]
 gi|218321829|emb|CAV17801.1| flagellar hook-associated protein FlgK [Vibrio splendidus LGP32]
          Length = 626

 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 8/40 (20%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A S L  Q   +     NI+NA T G       Y R+++ 
Sbjct: 10 AQSVLTAQRQ-LNTTGHNISNANTEG-------YSRQSVV 41


>gi|114777414|ref|ZP_01452411.1| Flagellar basal-body rod protein FlgB [Mariprofundus ferrooxydans
           PV-1]
 gi|114552196|gb|EAU54698.1| Flagellar basal-body rod protein FlgB [Mariprofundus ferrooxydans
           PV-1]
          Length = 133

 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 25/124 (20%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L +      S L  +     +++ NIANA T    P     +R    F   +     
Sbjct: 1   MDMLGSGFQKLESALIAREKVQGVLASNIANADT----PNFHADKRSFSDFLSELQTG-- 54

Query: 61  VRVKKIGVDQSTFVEEFDPGH------------PVANASGIVKYPNVNVLVETADMRETN 108
              K IG   +T        +            P A+  G     NV++  + A M E  
Sbjct: 55  ---KSIGAATTTNPMHISDTNEPGLSGSILGQQPSASMDGN----NVDMQQQMASMSENQ 107

Query: 109 RLYM 112
            +Y 
Sbjct: 108 LMYE 111


>gi|52841448|ref|YP_095247.1| flagellar basal body rod protein FlgB [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|54294160|ref|YP_126575.1| flagellar basal body rod protein FlgB [Legionella pneumophila str.
           Lens]
 gi|52628559|gb|AAU27300.1| flagellar basal body rod protein FlgB [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|53753992|emb|CAH15463.1| Flagellar basal-body rod protein FlgB [Legionella pneumophila str.
           Lens]
 gi|307609974|emb|CBW99503.1| flagellar basal-body rod protein FlgB [Legionella pneumophila 130b]
          Length = 130

 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 22/135 (16%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--SGGV 61
           L +   I    L  +  R  +++ NIAN  T         ++ + + F EV+    +G  
Sbjct: 5   LDSYFGIHAKALIARDQRASVLANNIANVNTPN-------FKARDVDFNEVLTATMAGNS 57

Query: 62  RVKKIGVDQ-----STFV--EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  ++  DQ     + F+   ++   H  A+  G      V+  +ET +       Y A+
Sbjct: 58  QQLRVTSDQHINTNADFMTHLKYRMTH-HASLDGN----TVDKDMETTEFARNALNYQAS 112

Query: 115 LQTIK-QSHDMMTTT 128
           L  +  +   M+T  
Sbjct: 113 LSFLNGKIKSMLTAL 127


>gi|86146149|ref|ZP_01064475.1| flagellar hook-associated protein [Vibrio sp. MED222]
 gi|85836096|gb|EAQ54228.1| flagellar hook-associated protein [Vibrio sp. MED222]
          Length = 626

 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 8/40 (20%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          A S L  Q   +     NI+NA T G       Y R+++ 
Sbjct: 10 AQSVLTAQRQ-LNTTGHNISNANTEG-------YSRQSVV 41


>gi|241761145|ref|ZP_04759234.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp.
          mobilis ATCC 10988]
 gi|241374764|gb|EER64225.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp.
          mobilis ATCC 10988]
          Length = 458

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 11/79 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-- 61
          +     I  SG+      + +I EN++NA TTG       Y R+ +S  E  +G  G+  
Sbjct: 1  MSDILQIGASGVLNYGKAIDVIGENVSNASTTG-------YARRDVSLIEAPNGGSGILG 53

Query: 62 --RVKKIGVDQSTFVEEFD 78
            +V   GV   +    +D
Sbjct: 54 LNQVSGNGVTTQSVTRAWD 72


>gi|261344145|ref|ZP_05971789.1| flagellar basal-body rod protein FlgB [Providencia rustigianii DSM
           4541]
 gi|282567738|gb|EFB73273.1| flagellar basal-body rod protein FlgB [Providencia rustigianii DSM
           4541]
          Length = 137

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 21/138 (15%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           +D L A+       L+++ AR  +++ NIANA T G       Y+ + I F   +  +  
Sbjct: 2   IDKLDATFAFQQRALSIREARQTVLASNIANADTPG-------YQARDIDFNRQLQQAMD 54

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY--P--------NVNVLVETADMRETN 108
            GV VK  G+  +   +    GH +  A+  +KY  P         V++ +E +   +  
Sbjct: 55  KGV-VKGKGISLAVTAKGHIEGHDMQPAAMDLKYRVPYQTSMDGNTVDMDIERSQFADNT 113

Query: 109 RLYMANLQTIK-QSHDMM 125
             Y A+L  I  Q   M+
Sbjct: 114 LKYQADLTFINSQVKSML 131


>gi|161526189|ref|YP_001581201.1| flagellar basal body rod protein FlgB [Burkholderia multivorans
          ATCC 17616]
 gi|189349095|ref|YP_001944723.1| flagellar basal body rod protein FlgB [Burkholderia multivorans
          ATCC 17616]
 gi|160343618|gb|ABX16704.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          ATCC 17616]
 gi|189333117|dbj|BAG42187.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
          17616]
          Length = 162

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       YR + + F   +  S
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YRARDVDFASTLAHS 52


>gi|330826761|ref|YP_004390064.1| flagellar hook-associated protein FlgK [Alicycliphilus
          denitrificans K601]
 gi|329312133|gb|AEB86548.1| flagellar hook-associated protein FlgK [Alicycliphilus
          denitrificans K601]
          Length = 660

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 14/79 (17%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++  ++    L      +Q    NIAN  T G       Y R++++ + V          
Sbjct: 1  MSLLNVGARALLANQVALQTTGHNIANVSTAG-------YSRQSVAMQTVQGQFTGSGYI 53

Query: 58 SGGVRVKKIGVDQSTFVEE 76
            GV V  I  + +  +  
Sbjct: 54 GNGVNVATILRNHNELLTR 72


>gi|254230134|ref|ZP_04923529.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
 gi|151937327|gb|EDN56190.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
          Length = 660

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 621 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 659


>gi|172061971|ref|YP_001809623.1| flagellar basal body rod protein FlgF [Burkholderia ambifaria
           MC40-6]
 gi|171994488|gb|ACB65407.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
           MC40-6]
          Length = 252

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 16/42 (38%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 208 EGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249



 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 1  MDYLIASAHIANSGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISF 51
          MD LI       + +   S  +    I++ N+ANA TTG       YR   ++F
Sbjct: 1  MDRLIY------TAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNF 48


>gi|322435953|ref|YP_004218165.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9]
 gi|321163680|gb|ADW69385.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9]
          Length = 251

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 27/106 (25%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
          MD   +  + A +GL  ++  +   + N+ANA T G       +R +  SF  V+     
Sbjct: 1  MD---SGLYAAYTGLLARTQALDTAANNLANASTNG-------FRAQRDSFSGVLASGLA 50

Query: 56 HGSGGVRV------------KKIGVDQSTFVEEFDPGHPVANASGI 89
           G  G +V                  Q   V   +P     N +G 
Sbjct: 51 AGQQGSQVGVGINSYGVLGGSSADQSQGPMVTTSNPLDVAINGTGF 96


>gi|229160702|ref|ZP_04288694.1| Flagellar hook-associated protein FlgK [Bacillus cereus R309803]
 gi|228622717|gb|EEK79551.1| Flagellar hook-associated protein FlgK [Bacillus cereus R309803]
          Length = 432

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 20/39 (51%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAINTMNEVFDSLFSIIR 432


>gi|229189870|ref|ZP_04316880.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 10876]
 gi|228593544|gb|EEK51353.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 10876]
          Length = 267

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 226 SNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEANEILR 267


>gi|220932550|ref|YP_002509458.1| flagellar hook-associated protein FlgK [Halothermothrix orenii H
          168]
 gi|219993860|gb|ACL70463.1| flagellar hook-associated protein FlgK [Halothermothrix orenii H
          168]
          Length = 471

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 11/70 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDT------PGSDPYRRKTISFEEVMHGSG---GVRVK 64
           L VQ   + +   NIANA T G +        +DPY      F           GV+++
Sbjct: 13 ALQVQKKSLDVTGHNIANANTEGYSRQRAVHTTTDPY--TVPGFTSPAGAGQVGTGVKIE 70

Query: 65 KIGVDQSTFV 74
          +I   +  F+
Sbjct: 71 QIVRLKDDFI 80


>gi|91225879|ref|ZP_01260848.1| flagellar hook-associated protein K [Vibrio alginolyticus 12G01]
 gi|91189529|gb|EAS75805.1| flagellar hook-associated protein K [Vibrio alginolyticus 12G01]
          Length = 646

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 607 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 645


>gi|56551501|ref|YP_162340.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp.
          mobilis ZM4]
 gi|56543075|gb|AAV89229.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp.
          mobilis ZM4]
          Length = 458

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 11/79 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-- 61
          +     I  SG+      + +I EN++NA TTG       Y R+ +S  E  +G  G+  
Sbjct: 1  MSDILQIGASGVLNYGKAIDVIGENVSNASTTG-------YARRDVSLIEAPNGGSGILG 53

Query: 62 --RVKKIGVDQSTFVEEFD 78
            +V   GV   +    +D
Sbjct: 54 LNQVSGNGVTTQSVTRAWD 72


>gi|209964689|ref|YP_002297604.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum
          SW]
 gi|209958155|gb|ACI98791.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum
          SW]
          Length = 240

 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +    +IA S       +M +++ NIAN  T+G       ++ +   F E + 
Sbjct: 1  MENVLYIALSRQEAMRRQMDVVANNIANMNTSG-------FKSQRPLFLEYLE 46



 Score = 33.7 bits (77), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  NV  +VET  M +  R Y    + I   H+ + T +  L R
Sbjct: 191 QGALEGSNVQPIVETTQMIDVLRAYQNTQRMIDSEHERLRTAIRQLGR 238


>gi|34103021|gb|AAQ59384.1| flagellar hook-associated protein FlgK [Chromobacterium violaceum
           ATCC 12472]
          Length = 438

 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 19/34 (55%)

Query: 99  VETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            E   + E  ++Y AN++ I  ++ +  +TL +L
Sbjct: 405 EEAVSLIEYQKMYQANMKVIAVANQLFESTLAIL 438



 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 14/54 (25%)

Query: 22 MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GVRVKKIGV 68
          M   S+NIAN +T G       Y R+ +       G+G       GV V  +  
Sbjct: 1  MNTASQNIANQQTPG-------YSRQGVVLATQAPGAGDPLSAGYGVNVSNVRR 47


>gi|126176150|ref|YP_001052299.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155]
 gi|125999355|gb|ABN63430.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155]
          Length = 457

 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             VN   E  ++    + YMAN + I  +  +  T L
Sbjct: 418 SGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTML 454


>gi|283784090|ref|YP_003363955.1| lateral flagellar hook associated protein 1 [Citrobacter
          rodentium ICC168]
 gi|282947544|emb|CBG87097.1| lateral flagellar hook associated protein 1 [Citrobacter
          rodentium ICC168]
          Length = 455

 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA T G       Y R+      +   +G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTDG-------YTRQVAVVSSIGASAGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|262273532|ref|ZP_06051346.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
          101886]
 gi|262222510|gb|EEY73821.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
          101886]
          Length = 124

 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 7/38 (18%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
           R ++I+ N+AN  T         Y+ + ISFE+ M  
Sbjct: 21 QRAKVIAGNLANVDTPN-------YKARDISFEQAMDS 51


>gi|255592868|ref|XP_002535736.1| conserved hypothetical protein [Ricinus communis]
 gi|223522123|gb|EEF26647.1| conserved hypothetical protein [Ricinus communis]
          Length = 274

 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 26/129 (20%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           AS +    GL      +  ++ NIANA T G       Y+   I   E +          
Sbjct: 169 ASFNERALGLRAYRQEL--LASNIANADTPG-------YKAVDIDINEALRTGKS----- 214

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
              D +  +           A G V    V++ VE A+  +   +Y   +  ++  + MM
Sbjct: 215 --KDDAPLLYRM-------PAQGSVDGNTVDMDVERAEFSQNAVMYEYTVDRVRGYYKMM 265

Query: 126 TTTLDLLRD 134
               DLL++
Sbjct: 266 D---DLLKN 271


>gi|254438850|ref|ZP_05052344.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198254296|gb|EDY78610.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 255

 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            +G ++  NVN+  E   M +  + +  + + ++   DM+   
Sbjct: 211 QTGALESSNVNLTTELTSMIQAQQQFSGSSRILQAYSDMIEKL 253


>gi|157371206|ref|YP_001479195.1| flagellar basal body rod protein FlgF [Serratia proteamaculans 568]
 gi|157322970|gb|ABV42067.1| flagellar basal-body rod protein FlgF [Serratia proteamaculans 568]
          Length = 251

 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKPMETMVDMIANARRFEMQMKVIHSVDENEQRANSLL 248


>gi|24217008|ref|NP_714489.1| flagellar hook-associated protein FlgK [Leptospira interrogans
           serovar Lai str. 56601]
 gi|24198413|gb|AAN51507.1| flagellar hook-associated protein FlgK [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 636

 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 20/36 (55%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           VN+  E A+M +    Y A+ + I   ++++ T ++
Sbjct: 597 VNLDEEMANMVQFQHAYNASAKMINTMNEILDTIIN 632


>gi|269965418|ref|ZP_06179537.1| flagellar hook-associated protein 1 [Vibrio alginolyticus 40B]
 gi|269829897|gb|EEZ84127.1| flagellar hook-associated protein 1 [Vibrio alginolyticus 40B]
          Length = 646

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 607 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 645


>gi|253773903|ref|YP_003036734.1| flagellar basal body rod protein FlgB [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161179|ref|YP_003044287.1| flagellar basal body rod protein FlgB [Escherichia coli B str.
           REL606]
 gi|297516832|ref|ZP_06935218.1| flagellar basal body rod protein FlgB [Escherichia coli OP50]
 gi|242376877|emb|CAQ31594.1| flagellar basal-body rod protein FlgB, subunit of Flagellar Motor
           Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324947|gb|ACT29549.1| flagellar basal-body rod protein FlgB [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973080|gb|ACT38751.1| flagellar basal-body rod protein B [Escherichia coli B str. REL606]
 gi|253977294|gb|ACT42964.1| flagellar basal-body rod protein B [Escherichia coli BL21(DE3)]
          Length = 138

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-----HGSGGVRVKKI--- 66
           L  Q    ++++ NIANA T G       Y+ + I F   +      G     V  +   
Sbjct: 18  LRAQRQ--EVLAANIANADTPG-------YQARDIDFASELKKVIQRGRDATSVVALTMT 68

Query: 67  --------GVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                    +   T   ++  P  P  + +       V++  E     + +  Y  +L  
Sbjct: 69  STQHIPAQALTPPTAELQYRIPDQPSLDGN------TVDMDRERTQFADNSLQYQMSLSA 122

Query: 118 IK-QSHDMMT 126
           +  Q   MM 
Sbjct: 123 LSGQIKGMMN 132


>gi|229195985|ref|ZP_04322737.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1293]
 gi|228587367|gb|EEK45433.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1293]
          Length = 257

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTNQRMISASQRVMTSFDKIYEKEANEILR 257


>gi|206975016|ref|ZP_03235931.1| putative flagellar basal-body rod protein [Bacillus cereus
           H3081.97]
 gi|217959255|ref|YP_002337803.1| flagellar basal body rod protein FlgG [Bacillus cereus AH187]
 gi|229138473|ref|ZP_04267062.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST26]
 gi|206747035|gb|EDZ58427.1| putative flagellar basal-body rod protein [Bacillus cereus
           H3081.97]
 gi|217066007|gb|ACJ80257.1| putative flagellar basal-body rod protein [Bacillus cereus AH187]
 gi|228645010|gb|EEL01253.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST26]
          Length = 257

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 257


>gi|126652479|ref|ZP_01724651.1| flagellar hook-associated protein K [Bacillus sp. B14905]
 gi|126590750|gb|EAZ84865.1| flagellar hook-associated protein K [Bacillus sp. B14905]
          Length = 530

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             V++  E  +M    + Y AN + I    + +   ++ + R
Sbjct: 486 SAVSLDEEMTNMITFQQAYNANARMITVVDETLDKIINGMGR 527


>gi|160878464|ref|YP_001557432.1| flagellar hook-associated protein FlgK [Clostridium
          phytofermentans ISDg]
 gi|160427130|gb|ABX40693.1| flagellar hook-associated protein FlgK [Clostridium
          phytofermentans ISDg]
          Length = 613

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 14/34 (41%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANART 34
          M        I NSGL    A +   + NIAN  T
Sbjct: 1  MPSTFFGLSIGNSGLYASQAGLNTTAHNIANIET 34


>gi|49480334|ref|YP_035891.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|49331890|gb|AAT62536.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 257

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 257


>gi|310767296|gb|ADP12246.1| flagellar hook-associated protein FlgK [Erwinia sp. Ejp617]
          Length = 551

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 38/117 (32%), Gaps = 27/117 (23%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    + A SGL+  SA +   S NI N   TG       Y R+T    +      G   
Sbjct: 1   MSNLINTAMSGLSASSAALNTTSNNITNYAVTG-------YSRQTTVLNQSASTLSGGNY 53

Query: 64  KKIGVDQSTFVEEFD------------PGHPVANASGIVKYPNVNVLVETADMRETN 108
              G   S+   E+D                ++  +G  +  N++      DM    
Sbjct: 54  YGNGAAVSSVYREYDQFINKQLLAASTQSSALSTQAG--QMSNID------DMMSGT 102


>gi|229155343|ref|ZP_04283453.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 4342]
 gi|228628058|gb|EEK84775.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 4342]
          Length = 257

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 257


>gi|169826733|ref|YP_001696891.1| flagellar hook-associated protein FlgK [Lysinibacillus sphaericus
           C3-41]
 gi|168991221|gb|ACA38761.1| Flagellar hook-associated protein 1 (HAP1) [Lysinibacillus
           sphaericus C3-41]
          Length = 530

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             V++  E  +M    + Y AN + I    + +   ++ + R
Sbjct: 486 SAVSLDEEMTNMITFQQAYNANARMITVVDETLDKIINGMGR 527


>gi|157146225|ref|YP_001453544.1| flagellar basal body rod protein FlgF [Citrobacter koseri ATCC
           BAA-895]
 gi|157083430|gb|ABV13108.1| hypothetical protein CKO_01982 [Citrobacter koseri ATCC BAA-895]
          Length = 251

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM    R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVSAMSDMIANARRFEMQMKVISSVDDNAGRANQLL 248


>gi|531462|gb|AAA67880.1| orfG [Bacillus subtilis subsp. subtilis str. 168]
          Length = 135

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A++ L     ++  IS N++N+ TTG       Y+ K  +F E++   
Sbjct: 1  MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTG-------YKAKDTNFSELVRQQ 48


>gi|304412502|ref|ZP_07394108.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183]
 gi|307307161|ref|ZP_07586899.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175]
 gi|304349144|gb|EFM13556.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183]
 gi|306910400|gb|EFN40831.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175]
          Length = 457

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             VN   E  ++    + YMAN + I  +  +  T L
Sbjct: 418 SGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTML 454


>gi|238919260|ref|YP_002932775.1| flagellar basal-body rod protein FlgF, [Edwardsiella ictaluri
           93-146]
 gi|238868829|gb|ACR68540.1| flagellar basal-body rod protein FlgF, putative [Edwardsiella
           ictaluri 93-146]
          Length = 251

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +     M    R +   ++ I+   D       LL
Sbjct: 204 GVLEGSNVQPVEAMISMISNARRFEMQMKVIRSVDDNEQKANQLL 248


>gi|238751763|ref|ZP_04613251.1| Flagellar basal-body rod protein flgF [Yersinia rohdei ATCC 43380]
 gi|238710034|gb|EEQ02264.1| Flagellar basal-body rod protein flgF [Yersinia rohdei ATCC 43380]
          Length = 251

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +   +DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKAVEAMSDMIANARSFEMQMKVIHSVDENEQRANQLL 248


>gi|126668564|ref|ZP_01739518.1| flagellar hook-associated protein [Marinobacter sp. ELB17]
 gi|126626969|gb|EAZ97612.1| flagellar hook-associated protein [Marinobacter sp. ELB17]
          Length = 668

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 16/69 (23%)

Query: 8  AHIANSG-LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSG------ 59
            I  SG L  Q+A +   + NI NA T G       Y R+ + F  +    +G      
Sbjct: 5  LGIGLSGILGSQAA-LNTTANNITNANTPG-------YSRQDVQFGAQTPQRTGAGSIGT 56

Query: 60 GVRVKKIGV 68
          GV V+ I  
Sbjct: 57 GVNVENIRR 65


>gi|262394933|ref|YP_003286787.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
 gi|262338527|gb|ACY52322.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
          Length = 646

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 607 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 645


>gi|39933725|ref|NP_946001.1| flagellar hook-associated protein 1 FlgK [Rhodopseudomonas
          palustris CGA009]
 gi|39647572|emb|CAE26092.1| possible flagellar hook-associated protein 1 (HAP1, FlgK protein)
          [Rhodopseudomonas palustris CGA009]
          Length = 587

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDT 38
           IA SGLA    ++ + S NI+NA TTG T
Sbjct: 8  SIAFSGLAATQVQISVTSANISNADTTGYT 37


>gi|297544025|ref|YP_003676327.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          mathranii subsp. mathranii str. A3]
 gi|296841800|gb|ADH60316.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          mathranii subsp. mathranii str. A3]
          Length = 480

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 7/45 (15%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
               IA +GL V    + +   NIANA T G       Y R+ +
Sbjct: 4  FQGLEIAKTGLFVSQKALDVTGHNIANANTPG-------YTRQVV 41


>gi|228920482|ref|ZP_04083827.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228839112|gb|EEM84408.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 249

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 208 SNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEANEILR 249


>gi|222147590|ref|YP_002548547.1| flagellar hook-associated protein FlgK [Agrobacterium vitis S4]
 gi|221734578|gb|ACM35541.1| flagellar-associated protein [Agrobacterium vitis S4]
          Length = 484

 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 20/37 (54%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E + M +  + Y A+ + +    +M+ + L++
Sbjct: 447 VNLDEELSKMLDIEQSYKASTKLMNAVDEMLKSLLEI 483


>gi|221199736|ref|ZP_03572779.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          CGD2M]
 gi|221208659|ref|ZP_03581659.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          CGD2]
 gi|221215568|ref|ZP_03588531.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          CGD1]
 gi|221164556|gb|EED97039.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          CGD1]
 gi|221171470|gb|EEE03917.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          CGD2]
 gi|221179975|gb|EEE12379.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          CGD2M]
          Length = 162

 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       YR + + F   +  S
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YRARDVDFASTLARS 52


>gi|167034947|ref|YP_001670178.1| flagellar basal body rod protein FlgB [Pseudomonas putida GB-1]
 gi|166861435|gb|ABY99842.1| flagellar basal-body rod protein FlgB [Pseudomonas putida GB-1]
          Length = 136

 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 9/46 (19%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          G   Q A  ++++ NIANA T         Y+ + + F  V+    
Sbjct: 17 GFRAQRA--EVLANNIANADTPN-------YKARDMDFASVLAAES 53


>gi|120597311|ref|YP_961885.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1]
 gi|120557404|gb|ABM23331.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1]
          Length = 457

 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             VN   E  ++    + YMAN + I  +  +  T L
Sbjct: 418 SGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTML 454


>gi|34497156|ref|NP_901371.1| flagellar basal-body rod protein flgB [Chromobacterium violaceum
          ATCC 12472]
 gi|34103013|gb|AAQ59376.1| probable flagellar basal-body rod protein flgB [Chromobacterium
          violaceum ATCC 12472]
          Length = 117

 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 12/74 (16%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          L     R  +++ NIAN  T G       Y+ + I F+  +  +       +  D     
Sbjct: 16 LRADRTR--VLASNIANENTPG-------YQARDIDFKAALASAA--ADSPLAFDDGGGD 64

Query: 75 EEFD-PGHPVANAS 87
            +  P HP  + +
Sbjct: 65 LLYRLPNHPSRDGN 78


>gi|146294544|ref|YP_001184968.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
           CN-32]
 gi|145566234|gb|ABP77169.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
           CN-32]
          Length = 457

 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             VN   E  ++    + YMAN + I  +  +  T L
Sbjct: 418 SGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTML 454


>gi|90415317|ref|ZP_01223251.1| hypothetical protein GB2207_08376 [marine gamma proteobacterium
           HTCC2207]
 gi|90332640|gb|EAS47810.1| hypothetical protein GB2207_08376 [marine gamma proteobacterium
           HTCC2207]
          Length = 253

 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 23/46 (50%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G+++  NVN +     M + +R +   L+ +K++  +      ++R
Sbjct: 206 GMLEGSNVNPVGTMIKMLDFSRQFEMQLKLVKETQSIDEAGSTMMR 251


>gi|188493729|ref|ZP_03000999.1| flagellar basal-body rod protein FlgB [Escherichia coli 53638]
 gi|188488928|gb|EDU64031.1| flagellar basal-body rod protein FlgB [Escherichia coli 53638]
          Length = 138

 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 14/60 (23%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          L  Q    ++++ NIANA T G       Y+ + I F   +      +V + G D ++ V
Sbjct: 18 LRAQRQ--EVLAANIANADTPG-------YQARDIDFASELK-----KVMQRGRDATSVV 63


>gi|52143687|ref|YP_083142.1| flagellar basal body rod protein FlgG [Bacillus cereus E33L]
 gi|51977156|gb|AAU18706.1| flagellar basal-body rod protein [Bacillus cereus E33L]
          Length = 257

 Score = 34.1 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 257


>gi|51894142|ref|YP_076833.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51857831|dbj|BAD41989.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 119

 Score = 34.1 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 29/98 (29%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG----VRVKKI 66
            +   S R ++++ N+ANA T G       ++R  + FE  +  +   GG    VR   +
Sbjct: 14  AIDAASLRQRVLANNLANAMTPG-------FKRSRVDFETELARALAKGGDPDQVRPTVV 66

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
               S          P  N        NV+V  E+  M
Sbjct: 67  RETDSIGR-------PDGN--------NVDVEAESVKM 89


>gi|315497882|ref|YP_004086686.1| flagellar basal-body rod protein flgf [Asticcacaulis excentricus CB
           48]
 gi|315415894|gb|ADU12535.1| flagellar basal-body rod protein FlgF [Asticcacaulis excentricus CB
           48]
          Length = 249

 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 78  DPGHPVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           DP  P A    G+++  NVN L E   + E NR Y +  + I+Q  ++  + ++
Sbjct: 191 DPA-PDARLRQGMIETSNVNALSEVTRLVEINRAYASVTKIIEQQAELNRSAVE 243


>gi|228933056|ref|ZP_04095919.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228826657|gb|EEM72428.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 249

 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 208 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 249


>gi|239815248|ref|YP_002944158.1| hypothetical protein Vapar_2263 [Variovorax paradoxus S110]
 gi|239801825|gb|ACS18892.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 259

 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G V+  NV+ + E A + ++ R + +  +      +M+   + 
Sbjct: 210 QGFVENSNVSSMQEMAQLIQSMRHFESMQRVALGYDEMIGGAVR 253


>gi|149912829|ref|ZP_01901363.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. AzwK-3b]
 gi|149813235|gb|EDM73061.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. AzwK-3b]
          Length = 129

 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 29/130 (22%)

Query: 14  GLAVQS-ARMQIISENIANARTTGDTPGSDPYRRKTI-SFEEVMH------GSGGVRVKK 65
            +AV +  R  +I++N+AN+ T G       Y  + +  F  ++        S   RV  
Sbjct: 13  AMAVHAGTRQAVIAQNLANSDTPG-------YAARDVAPFSTLIGTDAPQFTSKATRVTH 65

Query: 66  IGVDQSTFVEEFDPGHPVA--NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +         +  P +  A  + +G     +V+V  E        R +        ++  
Sbjct: 66  LNASSGPLQIDVSPRN-DAQTDPNGN----SVSVESEMLHAVSVKRQH-------DRAVA 113

Query: 124 MMTTTLDLLR 133
           +  + L LLR
Sbjct: 114 IYKSALGLLR 123


>gi|120603465|ref|YP_967865.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris DP4]
 gi|120563694|gb|ABM29438.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris DP4]
          Length = 698

 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A + +    Y A  + +  + +M    L L
Sbjct: 658 SGVNLDEEMASLVKFQHSYKAAAKLVTTADEMFQVLLGL 696


>gi|42780864|ref|NP_978111.1| flagellar basal body rod protein FlgG [Bacillus cereus ATCC 10987]
 gi|42736784|gb|AAS40719.1| flagellar basal-body rod protein, putative [Bacillus cereus ATCC
           10987]
          Length = 257

 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 257


>gi|229144385|ref|ZP_04272790.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST24]
 gi|228639016|gb|EEK95441.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST24]
          Length = 257

 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEANEILR 257


>gi|90411002|ref|ZP_01219016.1| flagellar basal body protein [Photobacterium profundum 3TCK]
 gi|90328215|gb|EAS44526.1| flagellar basal body protein [Photobacterium profundum 3TCK]
          Length = 131

 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 7/39 (17%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           R + ++ NIANA T G       Y+ K + F+  +  +
Sbjct: 21 KRAETLASNIANANTPG-------YKAKDMDFDRALKAA 52


>gi|15801190|ref|NP_287207.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
           EDL933]
 gi|15830705|ref|NP_309478.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
           str. Sakai]
 gi|168747151|ref|ZP_02772173.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4113]
 gi|168758635|ref|ZP_02783642.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4401]
 gi|168764485|ref|ZP_02789492.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4501]
 gi|168767732|ref|ZP_02792739.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4486]
 gi|168773918|ref|ZP_02798925.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4196]
 gi|168783603|ref|ZP_02808610.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4076]
 gi|168790008|ref|ZP_02815015.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC869]
 gi|168802018|ref|ZP_02827025.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC508]
 gi|195935463|ref|ZP_03080845.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
           str. EC4024]
 gi|208809503|ref|ZP_03251840.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4206]
 gi|208815239|ref|ZP_03256418.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4045]
 gi|208822644|ref|ZP_03262963.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4042]
 gi|209398681|ref|YP_002269919.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4115]
 gi|217328423|ref|ZP_03444505.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. TW14588]
 gi|254792455|ref|YP_003077292.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
           str. TW14359]
 gi|261227022|ref|ZP_05941303.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256256|ref|ZP_05948789.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282093|ref|YP_003498911.1| Flagellar basal-body rod protein FlgB [Escherichia coli O55:H7 str.
           CB9615]
 gi|12514611|gb|AAG55819.1|AE005317_8 flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. EDL933]
 gi|13360915|dbj|BAB34874.1| flagellar rod protein FlgB [Escherichia coli O157:H7 str. Sakai]
 gi|187770374|gb|EDU34218.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4196]
 gi|188018167|gb|EDU56289.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4113]
 gi|188999105|gb|EDU68091.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4076]
 gi|189354564|gb|EDU72983.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4401]
 gi|189363078|gb|EDU81497.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4486]
 gi|189365535|gb|EDU83951.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4501]
 gi|189370453|gb|EDU88869.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC869]
 gi|189375929|gb|EDU94345.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC508]
 gi|208729304|gb|EDZ78905.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4206]
 gi|208731887|gb|EDZ80575.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4045]
 gi|208738129|gb|EDZ85812.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4042]
 gi|209160081|gb|ACI37514.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC4115]
 gi|209773408|gb|ACI85016.1| flagellar rod protein FlgB [Escherichia coli]
 gi|209773410|gb|ACI85017.1| flagellar rod protein FlgB [Escherichia coli]
 gi|209773412|gb|ACI85018.1| flagellar rod protein FlgB [Escherichia coli]
 gi|209773414|gb|ACI85019.1| flagellar rod protein FlgB [Escherichia coli]
 gi|209773416|gb|ACI85020.1| flagellar rod protein FlgB [Escherichia coli]
 gi|217318850|gb|EEC27276.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. TW14588]
 gi|254591855|gb|ACT71216.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. TW14359]
 gi|290761966|gb|ADD55927.1| Flagellar basal-body rod protein FlgB [Escherichia coli O55:H7 str.
           CB9615]
 gi|320189756|gb|EFW64412.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. EC1212]
 gi|320637524|gb|EFX07324.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
           str. G5101]
 gi|320643085|gb|EFX12286.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H-
           str. 493-89]
 gi|320648543|gb|EFX17198.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H-
           str. H 2687]
 gi|320653857|gb|EFX21931.1| flagellar basal body rod protein FlgB [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659337|gb|EFX26906.1| flagellar basal body rod protein FlgB [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320664472|gb|EFX31623.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
           str. LSU-61]
 gi|326339295|gb|EGD63109.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. 1125]
 gi|326344744|gb|EGD68492.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
           str. 1044]
          Length = 138

 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-----HGSGGVRVKKI--- 66
           L  Q    ++++ NIANA T G       Y+ + I F   +      G     V  +   
Sbjct: 18  LRAQRQ--EVLAANIANADTPG-------YQARDIDFASELKKVMQRGRNATSVVALTMT 68

Query: 67  --------GVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                    +   T   ++  P  P  + +       V++  E     + +  Y  +L  
Sbjct: 69  STQHIPAQALTPPTAELQYRIPDQPSLDGN------TVDMDRERTQFADNSLQYQMSLSA 122

Query: 118 IK-QSHDMMT 126
           +  Q   MM 
Sbjct: 123 LSGQIKGMMN 132


>gi|237799215|ref|ZP_04587676.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          oryzae str. 1_6]
 gi|331022070|gb|EGI02127.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          oryzae str. 1_6]
          Length = 192

 Score = 34.1 bits (78), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 9/76 (11%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI--SFEEVMHGSGGVR 62
          ++   I  SG+   SA +  I  N AN  T G       Y R+ +  +    +    GV 
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAG-------YSRQQVLSTASAQIALGQGVG 53

Query: 63 VKKIGVDQSTFVEEFD 78
              G   S     ++
Sbjct: 54 YLGTGTTLSDVRRIYN 69


>gi|196045154|ref|ZP_03112387.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB108]
 gi|196024156|gb|EDX62830.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB108]
          Length = 249

 Score = 34.1 bits (78), Expect = 6.6,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 208 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 249


>gi|74101659|gb|AAZ99749.1| FlgFL [Aeromonas hydrophila]
          Length = 244

 Score = 34.1 bits (78), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ASG ++  NVN + E        R +   ++ +K + D
Sbjct: 194 ASGFLEGANVNAVDELISSMSLTRNFELQVKLMKTADD 231


>gi|150019059|ref|YP_001311313.1| flagellar basal body rod protein FlgG [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905524|gb|ABR36357.1| flagellar basal body rod protein [Clostridium beijerinckii NCIMB
           8052]
          Length = 256

 Score = 34.1 bits (78), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 6/60 (10%)

Query: 80  GHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            +P+ NA   V+       NV+   E   + E  R +  N + +K   + +     +L R
Sbjct: 196 DNPIYNAKVNVRQNFLESSNVDPSTELVKLMEIKRQFETNQKFVKMQDETVQKAASELGR 255


>gi|228945375|ref|ZP_04107730.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228814347|gb|EEM60613.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 257

 Score = 34.1 bits (78), Expect = 6.6,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 257


>gi|259908806|ref|YP_002649162.1| flagellar hook-associated protein FlgK [Erwinia pyrifoliae
          Ep1/96]
 gi|224964428|emb|CAX55937.1| Flagellar hook-filament junction protein 1 [Erwinia pyrifoliae
          Ep1/96]
          Length = 551

 Score = 34.1 bits (78), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 7/76 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    + A SGL+  SA +   S NI N   TG       Y R+T    +      G   
Sbjct: 1  MSNLINTAMSGLSASSAALNTTSNNITNYAVTG-------YSRQTTVLNQSASTLSGGNY 53

Query: 64 KKIGVDQSTFVEEFDP 79
             G   S+   E+D 
Sbjct: 54 YGNGAAVSSVYREYDQ 69


>gi|26991080|ref|NP_746505.1| flagellar basal body rod protein FlgB [Pseudomonas putida KT2440]
 gi|24986115|gb|AAN69969.1|AE016635_5 flagellar basal-body rod protein FlgB [Pseudomonas putida KT2440]
          Length = 136

 Score = 34.1 bits (78), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 9/46 (19%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          G   Q A  ++++ NIANA T         Y+ + + F  V+    
Sbjct: 17 GFRAQRA--EVLANNIANADTPN-------YKARDMDFASVLAAES 53


>gi|326939385|gb|AEA15281.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 257

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEANEILR 257


>gi|315301942|ref|ZP_07872943.1| flagellar hook protein FlgE [Listeria ivanovii FSL F6-596]
 gi|313629684|gb|EFR97816.1| flagellar hook protein FlgE [Listeria ivanovii FSL F6-596]
          Length = 342

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 300 EGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 342


>gi|299536009|ref|ZP_07049328.1| flagellar hook-associated protein FlgK [Lysinibacillus fusiformis
           ZC1]
 gi|298728614|gb|EFI69170.1| flagellar hook-associated protein FlgK [Lysinibacillus fusiformis
           ZC1]
          Length = 555

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           V++  E  +M    + Y AN + I    + +   ++ + R
Sbjct: 513 VSLDEEMTNMITFQQAYNANARMITVVDETLDKIINGMGR 552


>gi|291558217|emb|CBL35334.1| fagellar hook-basal body proteins [Eubacterium siraeum V10Sc8a]
          Length = 235

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G  +  NV+   E   + ET RL+ A+   +K    +    
Sbjct: 187 QGCFEKSNVDANKEITSLMETQRLFEASSAVLKYMDTINGRA 228


>gi|283955071|ref|ZP_06372574.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni 414]
 gi|283793438|gb|EFC32204.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni 414]
          Length = 608

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 8/61 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-GSGGVR 62
          +  + H   +GL     ++     NI+NA  T        Y R+ +      +  +GGV+
Sbjct: 3  IFGTLHTGVTGLKASEVQIATTGNNISNANAT-------FYTRQRVVQTTNGYITTGGVQ 55

Query: 63 V 63
          V
Sbjct: 56 V 56


>gi|192289145|ref|YP_001989750.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris TIE-1]
 gi|192282894|gb|ACE99274.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris TIE-1]
          Length = 587

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDT 38
           IA SGLA    ++ + S NI+NA TTG T
Sbjct: 8  SIAFSGLAATQVQISVTSANISNADTTGYT 37


>gi|157146229|ref|YP_001453548.1| flagellar basal body rod protein FlgB [Citrobacter koseri ATCC
          BAA-895]
 gi|157083434|gb|ABV13112.1| hypothetical protein CKO_01986 [Citrobacter koseri ATCC BAA-895]
          Length = 138

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 9/42 (21%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          L  Q    ++++ NIANA T G       Y+ + + F   + 
Sbjct: 18 LRAQRQ--EVLAANIANADTPG-------YQARDMDFASELK 50


>gi|330502731|ref|YP_004379600.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina NK-01]
 gi|328917017|gb|AEB57848.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina NK-01]
          Length = 135

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 30/132 (22%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------HGSGGVRVKKI- 66
           G   Q A  +++S NIANA T         Y+ + + F  V+         GGV + +  
Sbjct: 17  GFRAQRA--EVLSNNIANADTPN-------YKARDLDFASVLAEQNSRMQRGGVALNRTD 67

Query: 67  -------GVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
                  GV+       +  P H   + +       V++ +E A+  E    + A+   +
Sbjct: 68  SRHIPADGVNSGEAELPYRTPFHASLDQN------TVDLQIEQANYAENAVQFQASFTFL 121

Query: 119 KQSHDMMTTTLD 130
                 +T+ L 
Sbjct: 122 NSKFKGLTSALR 133


>gi|296502373|ref|YP_003664073.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           BMB171]
 gi|296323425|gb|ADH06353.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           BMB171]
          Length = 246

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 205 SNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEANEILR 246


>gi|238785496|ref|ZP_04629479.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
           43970]
 gi|238713598|gb|EEQ05627.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
           43970]
          Length = 251

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKAVEAMTDMIANARSFEMQMKIIHSVDENEQRANQLL 248


>gi|300114798|ref|YP_003761373.1| flagellar basal-body rod protein FlgF [Nitrosococcus watsonii
           C-113]
 gi|299540735|gb|ADJ29052.1| flagellar basal-body rod protein FlgF [Nitrosococcus watsonii
           C-113]
          Length = 247

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  N + +    +M    R Y    + ++ + ++ T +  +LR
Sbjct: 199 SGKLEASNASGVDALVEMIALARQYEMQTKMMQTAKELDTASAQMLR 245


>gi|289577712|ref|YP_003476339.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          italicus Ab9]
 gi|289527425|gb|ADD01777.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          italicus Ab9]
          Length = 480

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 7/45 (15%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
               IA +GL V    + +   NIANA T G       Y R+ +
Sbjct: 4  FQGLEIAKTGLFVSQKALDVTGHNIANANTPG-------YTRQVV 41


>gi|30261777|ref|NP_844154.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Ames]
 gi|47527010|ref|YP_018359.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184611|ref|YP_027863.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Sterne]
 gi|65319054|ref|ZP_00392013.1| COG4786: Flagellar basal body rod protein [Bacillus anthracis str.
           A2012]
 gi|167633188|ref|ZP_02391513.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0442]
 gi|167638782|ref|ZP_02397057.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0193]
 gi|170686326|ref|ZP_02877548.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0465]
 gi|170706443|ref|ZP_02896903.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0389]
 gi|177650448|ref|ZP_02933415.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0174]
 gi|228914350|ref|ZP_04077965.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229121324|ref|ZP_04250555.1| Flagellar basal-body rod protein flgG [Bacillus cereus 95/8201]
 gi|229600237|ref|YP_002866164.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0248]
 gi|254683274|ref|ZP_05147135.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723857|ref|ZP_05185643.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           A1055]
 gi|254734627|ref|ZP_05192339.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Western North America USA6153]
 gi|254741036|ref|ZP_05198724.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Kruger B]
 gi|254755279|ref|ZP_05207313.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Vollum]
 gi|254759816|ref|ZP_05211840.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Australia 94]
 gi|30256005|gb|AAP25640.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           Ames]
 gi|47502158|gb|AAT30834.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178538|gb|AAT53914.1| flagellar basal-body rod protein, putative [Bacillus anthracis str.
           Sterne]
 gi|167513246|gb|EDR88617.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0193]
 gi|167531226|gb|EDR93904.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0442]
 gi|170128541|gb|EDS97408.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0389]
 gi|170670023|gb|EDT20764.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0465]
 gi|172083592|gb|EDT68652.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0174]
 gi|228662169|gb|EEL17778.1| Flagellar basal-body rod protein flgG [Bacillus cereus 95/8201]
 gi|228845344|gb|EEM90380.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229264645|gb|ACQ46282.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0248]
          Length = 257

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 257


>gi|324325790|gb|ADY21050.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 257

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 257


>gi|319944129|ref|ZP_08018407.1| flagellar hook-associated protein [Lautropia mirabilis ATCC 51599]
 gi|319742623|gb|EFV95032.1| flagellar hook-associated protein [Lautropia mirabilis ATCC 51599]
          Length = 628

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A + +  + Y A  + I+ + +M  + L L R
Sbjct: 588 SGVNLDEEAARLLQYRQAYQAAAKVIQTADEMFNSILALAR 628


>gi|228926808|ref|ZP_04089876.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|229090737|ref|ZP_04221970.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-42]
 gi|228692679|gb|EEL46405.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-42]
 gi|228832921|gb|EEM78490.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 249

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 208 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 249


>gi|196039147|ref|ZP_03106454.1| putative flagellar basal-body rod protein [Bacillus cereus
           NVH0597-99]
 gi|196030292|gb|EDX68892.1| putative flagellar basal-body rod protein [Bacillus cereus
           NVH0597-99]
          Length = 249

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 208 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 249


>gi|78047925|ref|YP_364100.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78036355|emb|CAJ24046.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 476

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 23/101 (22%)

Query: 11  ANSGLA-------VQSARMQIISENIANA--RTTGDTPGSDPYRRKTISFEEVMHGS--- 58
           A SG++        QS  ++  +E +ANA  R  G       Y   T+     + GS   
Sbjct: 191 AGSGMSFPTSFGPAQST-LETTAETVANAGARAAGVKSAKPVY---TVPTNSTLMGSVAM 246

Query: 59  ----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNV 95
               G V +     D   F     P +  AN    +  P+V
Sbjct: 247 TALIGRVPIDGTVNDPYPFKILVGPDNLTANG---IDIPDV 284


>gi|45659268|ref|YP_003354.1| flagellar hook-associated protein FlgK [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45602514|gb|AAS71991.1| flagellar hook-associated protein 1 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 636

 Score = 34.1 bits (78), Expect = 6.9,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 20/36 (55%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           VN+  E A+M +    Y A+ + I   ++++ T ++
Sbjct: 597 VNLDEEMANMVQFQHAYNASAKMINTMNEILDTIIN 632


>gi|84502375|ref|ZP_01000511.1| flagellar hook-associated protein [Oceanicola batsensis HTCC2597]
 gi|84389187|gb|EAQ01984.1| flagellar hook-associated protein [Oceanicola batsensis HTCC2597]
          Length = 470

 Score = 34.1 bits (78), Expect = 6.9,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 10/68 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L A    + SGL   S R Q++S NIA+A+        + Y  +++   E +   GG
Sbjct: 1  MSILTAILA-SRSGLQANSQRAQLVSTNIAHAQ-------DENYSHRSLEVTEAL--GGG 50

Query: 61 VRVKKIGV 68
          VRV  +  
Sbjct: 51 VRVIGVAR 58


>gi|330983289|gb|EGH81392.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aptata str.
          DSM 50252]
          Length = 183

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTG 36
          +I  SGL   +  + +   NIAN  TTG
Sbjct: 1  NIGLSGLYAANKSLDVTGNNIANVATTG 28


>gi|238764397|ref|ZP_04625347.1| hypothetical protein ykris0001_37640 [Yersinia kristensenii ATCC
          33638]
 gi|238697423|gb|EEP90190.1| hypothetical protein ykris0001_37640 [Yersinia kristensenii ATCC
          33638]
          Length = 338

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 14/74 (18%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---VMHGSG----G 60
           + A SGL+     +  +S NI+N +  G       Y R+   F +    +  +G    G
Sbjct: 1  MNTAMSGLSAAQYALSTVSNNISNFQVAG-------YNRQNTVFAQNGGTLSPAGFIGNG 53

Query: 61 VRVKKIGVDQSTFV 74
          V V  +  + + F+
Sbjct: 54 VAVTGVNREYNAFI 67


>gi|228938885|ref|ZP_04101485.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971766|ref|ZP_04132387.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978375|ref|ZP_04138752.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           Bt407]
 gi|228781392|gb|EEM29593.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           Bt407]
 gi|228787856|gb|EEM35814.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228820734|gb|EEM66759.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 249

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 208 SNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEANEILR 249


>gi|229069323|ref|ZP_04202613.1| Flagellar basal-body rod protein flgG [Bacillus cereus F65185]
 gi|229078954|ref|ZP_04211506.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock4-2]
 gi|228704368|gb|EEL56802.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock4-2]
 gi|228713810|gb|EEL65695.1| Flagellar basal-body rod protein flgG [Bacillus cereus F65185]
          Length = 257

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEANEILR 257


>gi|217976222|ref|YP_002360369.1| flagellar basal body rod protein FlgB [Methylocella silvestris BL2]
 gi|217501598|gb|ACK49007.1| flagellar basal body rod protein FlgB [Methylocella silvestris BL2]
          Length = 126

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 20/118 (16%)

Query: 19  SARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE- 76
           + R  +I+ N+ANA T G       P+      F +            IG+D     +  
Sbjct: 18  TVRQSVIAANVANANTPGFTASDVTPF---EDVFNDASIRLAATDPGHIGIDPLASDQVS 74

Query: 77  ------FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                 ++  H     SG     +V++  E     E NR +  N   +K  + M+  +
Sbjct: 75  VKDGAAWETTH-----SGN----SVSLENEMMKAGEVNRSFSLNSSIVKSFNQMLMAS 123


>gi|206970637|ref|ZP_03231589.1| putative flagellar basal-body rod protein [Bacillus cereus AH1134]
 gi|206734273|gb|EDZ51443.1| putative flagellar basal-body rod protein [Bacillus cereus AH1134]
          Length = 257

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEANEILR 257


>gi|332161323|ref|YP_004297900.1| flagellar basal body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318605243|emb|CBY26741.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325665553|gb|ADZ42197.1| flagellar basal body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860605|emb|CBX70902.1| flagellar basal-body rod protein flgF [Yersinia enterocolitica
           W22703]
          Length = 251

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +   ADM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKAVEAMADMIANARGFEMQMKVIHSVDENEQRANQLL 248


>gi|312884837|ref|ZP_07744529.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC
          BAA-2122]
 gi|309367489|gb|EFP95049.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC
          BAA-2122]
          Length = 120

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 12/56 (21%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
           R ++++ N+AN  T G       Y  K +SF  V+      +V   GVD+     
Sbjct: 21 QRTKVLASNLANVDTPG-------YLAKDLSFATVVS-----QVSSQGVDKPIPKL 64


>gi|296534159|ref|ZP_06896653.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC
          49957]
 gi|296265514|gb|EFH11645.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC
          49957]
          Length = 248

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 7/49 (14%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          S LA Q      ++ NIANA T G       Y+   + F   +    GV
Sbjct: 10 SRLAAQQRATAALAMNIANADTPG-------YKSAQMVFGAHIDRQLGV 51


>gi|292487945|ref|YP_003530820.1| flagellar hook-filament junction protein 1 [Erwinia amylovora
          CFBP1430]
 gi|292899164|ref|YP_003538533.1| flagellar hook-associated protein 1 [Erwinia amylovora ATCC
          49946]
 gi|291199012|emb|CBJ46123.1| flagellar hook-associated protein 1 [Erwinia amylovora ATCC
          49946]
 gi|291553367|emb|CBA20412.1| Flagellar hook-filament junction protein 1 [Erwinia amylovora
          CFBP1430]
 gi|312172066|emb|CBX80323.1| Flagellar hook-filament junction protein 1 [Erwinia amylovora
          ATCC BAA-2158]
          Length = 551

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 7/76 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    + A SGL+  SA +   S NI N   TG       Y R+T    +      G   
Sbjct: 1  MSNLINTAMSGLSASSAALNTTSNNITNYAVTG-------YSRQTTVLNQSASTLSGGNY 53

Query: 64 KKIGVDQSTFVEEFDP 79
             G   S+   E+D 
Sbjct: 54 YGNGAAVSSVYREYDQ 69


>gi|229160734|ref|ZP_04288726.1| Flagellar basal-body rod protein flgG [Bacillus cereus R309803]
 gi|228622749|gb|EEK79583.1| Flagellar basal-body rod protein flgG [Bacillus cereus R309803]
          Length = 257

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+  + ++  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMASQKMIQASQRIMTSFDKIYEKEANEILR 257


>gi|118477204|ref|YP_894355.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis str.
           Al Hakam]
 gi|225863630|ref|YP_002749008.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB102]
 gi|229183964|ref|ZP_04311179.1| Flagellar basal-body rod protein flgG [Bacillus cereus BGSC 6E1]
 gi|118416429|gb|ABK84848.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|225789416|gb|ACO29633.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB102]
 gi|228599489|gb|EEK57094.1| Flagellar basal-body rod protein flgG [Bacillus cereus BGSC 6E1]
          Length = 257

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 257


>gi|86136708|ref|ZP_01055286.1| flagellar hook-associated protein [Roseobacter sp. MED193]
 gi|85826032|gb|EAQ46229.1| flagellar hook-associated protein [Roseobacter sp. MED193]
          Length = 471

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+   E  +M      Y AN + +    +MM T L +
Sbjct: 435 VDSDAELQNMMLIENAYAANAKMLSAIDEMMQTLLRM 471


>gi|119715009|ref|YP_921974.1| flagellar basal-body rod protein FlgB [Nocardioides sp. JS614]
 gi|119535670|gb|ABL80287.1| flagellar basal-body rod protein FlgB [Nocardioides sp. JS614]
          Length = 118

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 10/55 (18%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          D + +  + A  G+A    R ++ ++NIAN  T G       YR  ++ FE  + 
Sbjct: 7  DPVSSVLNAALDGIA---LRQRVTADNIANVDTPG-------YRASSVDFETSLR 51


>gi|300722685|ref|YP_003711975.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629192|emb|CBJ89788.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus nematophila ATCC 19061]
          Length = 138

 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 19/137 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GG 60
           D L A+       LA+++ R +I+S NIANA T G       Y+ + I F   +  +   
Sbjct: 3   DKLDAAFQFRQEALALRNQRQEILSANIANADTPG-------YQARDIDFAAQLKKTMAH 55

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVA--NASGIVKYP--------NVNVLVETADMRETNRL 110
            RV   G+  +   E   P  P        + + P         V++ +E ++  + +  
Sbjct: 56  GRVTGNGIGLTLTSERHIPIQPQKRLEMDLLYRMPYQTAMDGNTVDMDMERSNFADNSLK 115

Query: 111 YMANLQTIK-QSHDMMT 126
           Y A L     Q   MM+
Sbjct: 116 YQAELTMTNVQIKSMMS 132


>gi|255608368|ref|XP_002538891.1| Flagellar basal-body rod protein flgB, putative [Ricinus
          communis]
 gi|223509946|gb|EEF23492.1| Flagellar basal-body rod protein flgB, putative [Ricinus
          communis]
          Length = 156

 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R ++++ NIANA T         Y+ + I F+  M  +
Sbjct: 26 ALRVRNQRQELLASNIANADTPQ-------YKARDIDFQSAMQSA 63


>gi|92114092|ref|YP_574020.1| flagellar hook-associated protein [Chromohalobacter salexigens
          DSM 3043]
 gi|91797182|gb|ABE59321.1| Flagellar hook-associated protein [Chromohalobacter salexigens
          DSM 3043]
          Length = 539

 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 10/67 (14%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---GV 61
          ++   I  SGL+   + +   S N++N  T G       Y R+     E         GV
Sbjct: 1  MSIFSIGLSGLSAAQSALSTTSNNLSNVYTEG-------YNRQLTILGESYSNGSTGTGV 53

Query: 62 RVKKIGV 68
           V ++  
Sbjct: 54 SVDEVQR 60


>gi|47565441|ref|ZP_00236482.1| flagellar basal-body rod protein flgF, putative [Bacillus cereus
           G9241]
 gi|47557431|gb|EAL15758.1| flagellar basal-body rod protein flgF, putative [Bacillus cereus
           G9241]
          Length = 257

 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 257


>gi|323203175|gb|EFZ88205.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
          enterica serovar Montevideo str. 609460]
          Length = 179

 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 17/71 (23%)

Query: 13 SGLAVQSARMQ---IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
          + +   S  +    + + N+ANA     TPG          F   ++    V V  + + 
Sbjct: 7  TAMGAASQTLNQQAVTASNLANA----STPG----------FRAQLNALRAVPVDGLSLA 52

Query: 70 QSTFVEEFDPG 80
            T V    PG
Sbjct: 53 TRTLVTASTPG 63


>gi|154174839|ref|YP_001408540.1| flagellar basal body rod protein FlgB [Campylobacter curvus
          525.92]
 gi|112803089|gb|EAU00433.1| flagellar basal-body rod protein FlgB [Campylobacter curvus
          525.92]
          Length = 144

 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 7/46 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           +A +  R ++IS NIAN  T         Y+ + I+FE V+    
Sbjct: 16 AMAAREMRQKLISGNIANIDT-------PFYKARDINFESVLRQKA 54


>gi|165869539|ref|ZP_02214198.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0488]
 gi|190566290|ref|ZP_03019208.1| putative flagellar basal-body rod protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|218902886|ref|YP_002450720.1| putative flagellar basal-body rod protein [Bacillus cereus AH820]
 gi|227815455|ref|YP_002815464.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           CDC 684]
 gi|164714979|gb|EDR20497.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0488]
 gi|190562425|gb|EDV16392.1| putative flagellar basal-body rod protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|218539299|gb|ACK91697.1| putative flagellar basal-body rod protein [Bacillus cereus AH820]
 gi|227003269|gb|ACP13012.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           CDC 684]
          Length = 249

 Score = 34.1 bits (78), Expect = 7.2,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    R+  A+ + +     +      ++LR
Sbjct: 208 SNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEANEILR 249


>gi|144899352|emb|CAM76216.1| Flagellar hook-associated protein [Magnetospirillum
          gryphiswaldense MSR-1]
          Length = 939

 Score = 34.1 bits (78), Expect = 7.2,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 9/67 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-VMHG-SGGV 61
          L    + A SGL      +  +++N+ N  T G       Y RK ++ E  V++G   GV
Sbjct: 3  LTLGLNTALSGLLTNQRALDTVAQNVTNVNTKG-------YVRKVMNQESRVLNGFGAGV 55

Query: 62 RVKKIGV 68
          +V  +  
Sbjct: 56 QVGSVTR 62


>gi|145297455|ref|YP_001140296.1| lateral flagellar basal-body rod protein LfgF [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142850227|gb|ABO88548.1| lateral flagellar basal-body rod protein LfgF [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 236

 Score = 34.1 bits (78), Expect = 7.2,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ASG ++  NVN + E        R +   ++ +K + D
Sbjct: 186 ASGFLEGANVNAVDELISSMSLTRNFELQVKLMKTADD 223


>gi|30019815|ref|NP_831446.1| flagellar basal body rod protein FlgG [Bacillus cereus ATCC 14579]
 gi|218235496|ref|YP_002366457.1| flagellar basal body rod protein FlgG [Bacillus cereus B4264]
 gi|218896706|ref|YP_002445117.1| putative flagellar basal-body rod protein [Bacillus cereus G9842]
 gi|228907405|ref|ZP_04071263.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL
           200]
 gi|228952155|ref|ZP_04114247.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228958053|ref|ZP_04119788.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229043528|ref|ZP_04191237.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH676]
 gi|229109228|ref|ZP_04238827.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-15]
 gi|229127099|ref|ZP_04256096.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-Cer4]
 gi|229149977|ref|ZP_04278203.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1550]
 gi|29895360|gb|AAP08647.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 14579]
 gi|218163453|gb|ACK63445.1| putative flagellar basal-body rod protein [Bacillus cereus B4264]
 gi|218540813|gb|ACK93207.1| putative flagellar basal-body rod protein [Bacillus cereus G9842]
 gi|228633499|gb|EEK90102.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1550]
 gi|228656215|gb|EEL12056.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-Cer4]
 gi|228674238|gb|EEL29483.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-15]
 gi|228725750|gb|EEL76998.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH676]
 gi|228801570|gb|EEM48452.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228807509|gb|EEM54036.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228852266|gb|EEM97062.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL
           200]
          Length = 257

 Score = 34.1 bits (78), Expect = 7.2,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEANEILR 257


>gi|167835108|ref|ZP_02461991.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
          MSMB43]
          Length = 163

 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       YR + + F   +  +
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YRARDVDFSSTLARA 52


>gi|117623259|ref|YP_852172.1| flagellar basal body rod protein FlgB [Escherichia coli APEC O1]
 gi|115512383|gb|ABJ00458.1| cell-proximal portion of basal-body rod FlgB [Escherichia coli
          APEC O1]
 gi|323953241|gb|EGB49107.1| flagellar basal-body rod protein FlgB [Escherichia coli H252]
          Length = 138

 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 14/60 (23%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          L  Q    ++++ NIANA T G       Y+ + I F   +      +V + G D ++ V
Sbjct: 18 LRAQRQ--EVLAANIANADTPG-------YQARDIDFASELK-----KVMQRGRDATSVV 63


>gi|284989559|ref|YP_003408113.1| flagellar basal-body rod protein FlgB [Geodermatophilus obscurus
           DSM 43160]
 gi|284062804|gb|ADB73742.1| flagellar basal-body rod protein FlgB [Geodermatophilus obscurus
           DSM 43160]
          Length = 115

 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 43/120 (35%), Gaps = 20/120 (16%)

Query: 13  SGLA--VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
           S L    Q  R  + ++NIAN +T G   G        + FE  + G+     +      
Sbjct: 12  SALNGLAQRQR--VTADNIANLQTPGFLAG-------RVDFETGLRGAL-TSGQTPTATT 61

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            T     +P     N        NVN+  ET    ET   Y   L  +   +++M T L 
Sbjct: 62  GTVHRSLEPTRMDGN--------NVNLDAETVIATETGLRYQLALNALDGKYNVMRTALR 113


>gi|218689026|ref|YP_002397238.1| flagellar basal body rod protein FlgB [Escherichia coli ED1a]
 gi|218426590|emb|CAR07418.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli ED1a]
 gi|324007913|gb|EGB77132.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 57-2]
          Length = 138

 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 14/60 (23%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          L  Q    ++++ NIANA T G       Y+ + I F   +      +V + G D ++ V
Sbjct: 18 LRAQRQ--EVLAANIANADTPG-------YQARDIDFASELK-----KVMQRGRDATSVV 63


>gi|170680262|ref|YP_001742379.1| lateral flagellar hook associated protein 1 [Escherichia coli
          SMS-3-5]
 gi|170517980|gb|ACB16158.1| lateral flagellar hook associated protein 1 [Escherichia coli
          SMS-3-5]
          Length = 458

 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|167750706|ref|ZP_02422833.1| hypothetical protein EUBSIR_01684 [Eubacterium siraeum DSM 15702]
 gi|167656385|gb|EDS00515.1| hypothetical protein EUBSIR_01684 [Eubacterium siraeum DSM 15702]
          Length = 235

 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G  +  NV+   E   + ET RL+ A+   +K    +    
Sbjct: 187 QGCFEKSNVDANKEITSLMETQRLFEASSAVLKYMDTINGRA 228


>gi|118474675|ref|YP_891310.1| flagellar hook-associated protein FlgK [Campylobacter fetus
          subsp. fetus 82-40]
 gi|118413901|gb|ABK82321.1| flagellar hook-associated protein FlgK [Campylobacter fetus
          subsp. fetus 82-40]
          Length = 617

 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 7/51 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV 54
          +  S +   SGL     ++Q+  +NI N  +       D Y R+ +     
Sbjct: 3  IFDSLYTGASGLNAAQLQIQVTGQNITNINS-------DYYTRQRVVQSAT 46


>gi|310659650|ref|YP_003937371.1| flagellar hook-associated protein 1 [Clostridium sticklandii DSM
          519]
 gi|308826428|emb|CBH22466.1| flagellar hook-associated protein 1 [Clostridium sticklandii]
          Length = 518

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 1  MDYLIASAHIANSGL-AVQSARMQIISENIANARTTGDT 38
          M    A   IA+SGL A Q A + I   NI+N  T G T
Sbjct: 1  MRSTFAGLSIASSGLFAAQRA-LDITGHNISNTNTRGYT 38


>gi|270262400|ref|ZP_06190671.1| flagellar basal-body rod protein FlgF [Serratia odorifera 4Rx13]
 gi|270043084|gb|EFA16177.1| flagellar basal-body rod protein FlgF [Serratia odorifera 4Rx13]
          Length = 251

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKPMETMVDMIANARRFEMQMKVIHSVDENEQRANSLL 248


>gi|170694393|ref|ZP_02885547.1| flagellar basal-body rod protein FlgF [Burkholderia graminis
          C4D1M]
 gi|170140816|gb|EDT08990.1| flagellar basal-body rod protein FlgF [Burkholderia graminis
          C4D1M]
          Length = 252

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 12/60 (20%)

Query: 1  MDYLI-ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          MD LI  +   +   L  Q+    I++ N+ANA TTG       +R +  +F  V    G
Sbjct: 1  MDRLIYTAMSGSTQALEQQA----IVANNLANASTTG-------FRAQLATFRAVPMSFG 49


>gi|148380623|ref|YP_001255164.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A
          str. ATCC 3502]
 gi|153932093|ref|YP_001384909.1| flagellar basal body rod protein FlgB [Clostridium botulinum A
          str. ATCC 19397]
 gi|153937135|ref|YP_001388378.1| flagellar basal body rod protein FlgB [Clostridium botulinum A
          str. Hall]
 gi|153941113|ref|YP_001391965.1| flagellar basal body rod protein FlgB [Clostridium botulinum F
          str. Langeland]
 gi|168183266|ref|ZP_02617930.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Bf]
 gi|170757776|ref|YP_001782282.1| flagellar basal body rod protein FlgB [Clostridium botulinum B1
          str. Okra]
 gi|226950078|ref|YP_002805169.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A2
          str. Kyoto]
 gi|237796105|ref|YP_002863657.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Ba4
          str. 657]
 gi|148290107|emb|CAL84226.1| flagellar basal-body rod protein [Clostridium botulinum A str.
          ATCC 3502]
 gi|152928137|gb|ABS33637.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A
          str. ATCC 19397]
 gi|152933049|gb|ABS38548.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A
          str. Hall]
 gi|152937009|gb|ABS42507.1| flagellar basal-body rod protein FlgB [Clostridium botulinum F
          str. Langeland]
 gi|169122988|gb|ACA46824.1| flagellar basal-body rod protein FlgB [Clostridium botulinum B1
          str. Okra]
 gi|182673652|gb|EDT85613.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Bf]
 gi|226842504|gb|ACO85170.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A2
          str. Kyoto]
 gi|229262300|gb|ACQ53333.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Ba4
          str. 657]
 gi|295319982|gb|ADG00360.1| flagellar basal-body rod protein FlgB [Clostridium botulinum F
          str. 230613]
          Length = 133

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +   S R ++IS NIAN  T    P    Y+R  ++FEE +  +
Sbjct: 20 MNASSYRGKVISNNIANYNT----PD---YKRHYVTFEETLKDN 56


>gi|15639387|ref|NP_218836.1| flagellar basal-body rod protein (flgB) [Treponema pallidum
          subsp. pallidum str. Nichols]
 gi|189025629|ref|YP_001933401.1| flagellar basal-body rod protein [Treponema pallidum subsp.
          pallidum SS14]
 gi|3322679|gb|AAC65384.1| flagellar basal-body rod protein (flgB) [Treponema pallidum
          subsp. pallidum str. Nichols]
 gi|189018204|gb|ACD70822.1| flagellar basal-body rod protein [Treponema pallidum subsp.
          pallidum SS14]
 gi|291059786|gb|ADD72521.1| flagellar basal-body rod protein FlgB [Treponema pallidum subsp.
          pallidum str. Chicago]
          Length = 136

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    +  + +  L V + R ++ + N+ANA   G       ++R  ++FE  +  +
Sbjct: 1  MNSFTRTVDLLHRALDVNALRYEVTANNLANAEVPG-------FKRTDVNFEAELKRA 51


>gi|17548572|ref|NP_521912.1| flagellar hook-associated protein FlgK [Ralstonia solanacearum
           GMI1000]
 gi|17430820|emb|CAD17502.1| probable flagellar hook-associated protein 1 [Ralstonia
           solanacearum GMI1000]
          Length = 642

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 20/37 (54%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E  ++ +  + Y A+ + ++ ++ +  + L +
Sbjct: 603 VNLDDEAMNLMKYQQAYQASAKVMQTANSLFDSLLSI 639



 Score = 33.7 bits (77), Expect = 9.4,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +  +I  +GL V    +Q+   NI+NA T G       Y R+     E +  + G     
Sbjct: 4  SLLNIGATGLRVADINLQVTGNNISNASTAG-------YSRQEAVQTENIPMATGAGYLG 56

Query: 66 IGVDQSTFVEEFDP 79
           GV+ +T    +D 
Sbjct: 57 QGVNVTTVKRIYDQ 70


>gi|327254560|gb|EGE66176.1| flagellar hook-associated protein FlgK [Escherichia coli STEC_7v]
          Length = 458

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|228964756|ref|ZP_04125863.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228795006|gb|EEM42505.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 249

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 208 SNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEANEILR 249


>gi|195941352|ref|ZP_03086734.1| flagellar basal body rod protein FlgB [Borrelia burgdorferi 80a]
 gi|216264410|ref|ZP_03436402.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 156a]
 gi|218249205|ref|YP_002374817.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi ZS7]
 gi|221217697|ref|ZP_03589165.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 72a]
 gi|224533198|ref|ZP_03673798.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          WI91-23]
 gi|224533758|ref|ZP_03674346.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          CA-11.2a]
 gi|225549095|ref|ZP_03770070.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 94a]
 gi|225550185|ref|ZP_03771145.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 118a]
 gi|226320595|ref|ZP_03796155.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          29805]
 gi|226321612|ref|ZP_03797138.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          Bol26]
 gi|1196315|gb|AAB51407.1| flagellar basal body rod protein [Borrelia burgdorferi]
 gi|215980883|gb|EEC21690.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 156a]
 gi|218164393|gb|ACK74454.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi ZS7]
 gi|221192374|gb|EEE18593.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 72a]
 gi|224511925|gb|EEF82326.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          WI91-23]
 gi|224513051|gb|EEF83414.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          CA-11.2a]
 gi|225369297|gb|EEG98750.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 118a]
 gi|225370321|gb|EEG99759.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 94a]
 gi|226232801|gb|EEH31554.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          Bol26]
 gi|226234014|gb|EEH32735.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          29805]
 gi|312148512|gb|ADQ31171.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi JD1]
 gi|312149176|gb|ADQ29247.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi N40]
          Length = 135

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    S   ++  L V S R  +IS+NIAN  T         ++R  ISFE  +  +
Sbjct: 1  MNDFERSVDFSHRYLDVLSLRQSVISDNIANVDTPN-------FKRSKISFESELEKA 51


>gi|66768556|ref|YP_243318.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. campestris str. 8004]
 gi|66573888|gb|AAY49298.1| flagellar protein [Xanthomonas campestris pv. campestris str.
          8004]
          Length = 624

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++      S L      +  +S N+AN  T G       Y R+ + F             
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEG-------YSRQRVEFATRTPTDMGYAFV 53

Query: 58 SGGVRVKKIGV 68
            G ++  +G 
Sbjct: 54 GNGAKISDVGR 64


>gi|323947625|gb|EGB43629.1| flagellar basal-body rod protein FlgB [Escherichia coli H120]
          Length = 138

 Score = 33.7 bits (77), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 14/60 (23%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          L  Q    ++++ NIANA T G       Y+ + I F   +      +V + G D ++ V
Sbjct: 18 LRAQRQ--EVLAANIANADTPG-------YQARDIDFASELK-----KVMQRGRDATSVV 63


>gi|299068738|emb|CBJ39977.1| flagellar hook-filament junction protein 1 [Ralstonia solanacearum
           CMR15]
          Length = 642

 Score = 33.7 bits (77), Expect = 7.6,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 20/37 (54%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E  ++ +  + Y A+ + ++ ++ +  + L +
Sbjct: 603 VNLDDEAMNLMKYQQAYQASAKVMQTANSLFDSLLSI 639


>gi|289579873|ref|YP_003478339.1| hypothetical protein Nmag_0185 [Natrialba magadii ATCC 43099]
 gi|289529426|gb|ADD03777.1| conserved hypothetical protein [Natrialba magadii ATCC 43099]
          Length = 216

 Score = 33.7 bits (77), Expect = 7.6,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 20/83 (24%)

Query: 23  QIISENIANARTTGDTPGSDP-----------YRRKTISFEEVMHGSGGVRVKKIGVDQS 71
             ++ N+ N       P  +P           Y  + I  +  + G G VR  +I  DQ 
Sbjct: 103 DALASNVNNTILATRHPDGEPPQPVSIPAATRYHWRGI--QARLTGFGEVRAARIDSDQ- 159

Query: 72  TFVEEFDPGHPVANASGIVKYPN 94
                 +P HP+ANA G  ++ N
Sbjct: 160 ------NPAHPLANAPGRYQHVN 176


>gi|254522823|ref|ZP_05134878.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
 gi|219720414|gb|EED38939.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
          Length = 99

 Score = 33.7 bits (77), Expect = 7.6,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 39/131 (29%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     +A  G+      +Q+ + N+AN      TP       + +  +    G GGV  
Sbjct: 1   MNNVMGMALGGMRAAQQGVQVAAHNVANL----ATPD-----AQRLQLQRAEDGQGGVGT 51

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR----LYMANLQTIK 119
              G D        DP  P+ +                       R     + AN   I+
Sbjct: 52  TVAGADP-------DPTAPLGD-------------------LLAARAEVVAFAANASVIR 85

Query: 120 QSHDMMTTTLD 130
           +   M+ + LD
Sbjct: 86  RQDQMLGSLLD 96


>gi|218133657|ref|ZP_03462461.1| hypothetical protein BACPEC_01526 [Bacteroides pectinophilus ATCC
          43243]
 gi|217991032|gb|EEC57038.1| hypothetical protein BACPEC_01526 [Bacteroides pectinophilus ATCC
          43243]
          Length = 131

 Score = 33.7 bits (77), Expect = 7.6,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 7/39 (17%)

Query: 20 ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           R ++++ NIAN  T G       Y+RK +SFE+ ++ +
Sbjct: 22 LRNEVLTNNIANVDTPG-------YKRKDVSFEKYLNSA 53


>gi|331671810|ref|ZP_08372606.1| flagellar hook-associated protein FlgK [Escherichia coli TA280]
 gi|331070799|gb|EGI42158.1| flagellar hook-associated protein FlgK [Escherichia coli TA280]
          Length = 458

 Score = 33.7 bits (77), Expect = 7.6,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|237810458|ref|YP_002894909.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          MSHR346]
 gi|237506387|gb|ACQ98705.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          MSHR346]
          Length = 163

 Score = 33.7 bits (77), Expect = 7.6,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       YR + + F   +  +
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YRARDVDFSSTLARA 52


>gi|262273528|ref|ZP_06051342.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
           101886]
 gi|262222506|gb|EEY73817.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
           101886]
          Length = 243

 Score = 33.7 bits (77), Expect = 7.7,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 28/64 (43%), Gaps = 5/64 (7%)

Query: 75  EEFDPGHPVAN-----ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             ++     A+     A G ++  NVN +       + +R +   ++ +K + ++ +T  
Sbjct: 178 RTYNGEPVDADQGVTVAVGYLESSNVNAIDALVKNIDLSRNFEFQIKMMKTAEELASTGN 237

Query: 130 DLLR 133
            L+R
Sbjct: 238 RLVR 241


>gi|289804815|ref|ZP_06535444.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 134

 Score = 33.7 bits (77), Expect = 7.7,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 86  SGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 131


>gi|170768328|ref|ZP_02902781.1| flagellar basal-body rod protein FlgB [Escherichia albertii
          TW07627]
 gi|170123094|gb|EDS92025.1| flagellar basal-body rod protein FlgB [Escherichia albertii
          TW07627]
          Length = 138

 Score = 33.7 bits (77), Expect = 7.7,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 14/57 (24%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS 71
          L  Q    ++++ NIANA T         Y+ + I F   +      RV +   D++
Sbjct: 18 LRAQRQ--EVLAANIANADTPA-------YQARDIDFASELK-----RVMQRRRDET 60


>gi|149927795|ref|ZP_01916046.1| flagellar basal-body rod protein FlgB [Limnobacter sp. MED105]
 gi|149823417|gb|EDM82648.1| flagellar basal-body rod protein FlgB [Limnobacter sp. MED105]
          Length = 150

 Score = 33.7 bits (77), Expect = 7.7,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 7/59 (11%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          D L  +   +   L +++ R ++++ NI+N  T         Y+     F+  +  + G
Sbjct: 3  DKLTDAMQFSAEALKLRARRQEVLTSNISNVDTPN-------YKAVDFDFQSALKAATG 54


>gi|91210225|ref|YP_540211.1| flagellar basal body rod protein FlgB [Escherichia coli UTI89]
 gi|215486282|ref|YP_002328713.1| flagellar basal body rod protein FlgB [Escherichia coli O127:H6
          str. E2348/69]
 gi|218557955|ref|YP_002390868.1| flagellar basal body rod protein FlgB [Escherichia coli S88]
 gi|237706941|ref|ZP_04537422.1| flagellar basal body rod protein FlgB [Escherichia sp. 3_2_53FAA]
 gi|312968853|ref|ZP_07783060.1| flagellar basal-body rod protein FlgB [Escherichia coli 2362-75]
 gi|331646331|ref|ZP_08347434.1| flagellar basal-body rod protein FlgB [Escherichia coli M605]
 gi|331657135|ref|ZP_08358097.1| flagellar basal-body rod protein FlgB [Escherichia coli TA206]
 gi|91071799|gb|ABE06680.1| cell-proximal portion of basal-body rod FlgB [Escherichia coli
          UTI89]
 gi|215264354|emb|CAS08711.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli O127:H6 str. E2348/69]
 gi|218364724|emb|CAR02414.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli S88]
 gi|222032826|emb|CAP75565.1| flagellar basal-body rod protein flgB [Escherichia coli LF82]
 gi|226898151|gb|EEH84410.1| flagellar basal body rod protein FlgB [Escherichia sp. 3_2_53FAA]
 gi|294489848|gb|ADE88604.1| flagellar basal-body rod protein FlgB [Escherichia coli IHE3034]
 gi|307627457|gb|ADN71761.1| flagellar basal body rod protein FlgB [Escherichia coli UM146]
 gi|312286255|gb|EFR14168.1| flagellar basal-body rod protein FlgB [Escherichia coli 2362-75]
 gi|312945635|gb|ADR26462.1| flagellar basal body rod protein FlgB [Escherichia coli O83:H1
          str. NRG 857C]
 gi|315287372|gb|EFU46783.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 110-3]
 gi|320196445|gb|EFW71068.1| Flagellar basal-body rod protein FlgB [Escherichia coli
          WV_060327]
 gi|323190585|gb|EFZ75857.1| flagellar basal-body rod protein FlgB [Escherichia coli RN587/1]
 gi|323957897|gb|EGB53609.1| flagellar basal-body rod protein FlgB [Escherichia coli H263]
 gi|330910887|gb|EGH39397.1| flagellar basal-body rod protein FlgB [Escherichia coli AA86]
 gi|331045083|gb|EGI17210.1| flagellar basal-body rod protein FlgB [Escherichia coli M605]
 gi|331055383|gb|EGI27392.1| flagellar basal-body rod protein FlgB [Escherichia coli TA206]
          Length = 138

 Score = 33.7 bits (77), Expect = 7.7,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 14/60 (23%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          L  Q    ++++ NIANA T G       Y+ + I F   +      +V + G D ++ V
Sbjct: 18 LRAQRQ--EVLAANIANADTPG-------YQARDIDFASELK-----KVMQRGRDATSVV 63


>gi|21231391|ref|NP_637308.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. campestris str. ATCC 33913]
 gi|188991635|ref|YP_001903645.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. campestris str. B100]
 gi|21113056|gb|AAM41232.1| flagellar protein [Xanthomonas campestris pv. campestris str.
          ATCC 33913]
 gi|167733395|emb|CAP51596.1| Flagellar hook-associated protein 1 (HAP1) [Xanthomonas
          campestris pv. campestris]
          Length = 624

 Score = 33.7 bits (77), Expect = 7.7,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++      S L      +  +S N+AN  T G       Y R+ + F             
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEG-------YSRQRVEFATRTPTDMGYAFV 53

Query: 58 SGGVRVKKIGV 68
            G ++  +G 
Sbjct: 54 GNGAKISDVGR 64


>gi|323976263|gb|EGB71356.1| flagellar hook protein FlgK [Escherichia coli TW10509]
          Length = 458

 Score = 33.7 bits (77), Expect = 7.8,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|323490138|ref|ZP_08095358.1| flagellar basal-body rod protein [Planococcus donghaensis MPA1U2]
 gi|323396186|gb|EGA89012.1| flagellar basal-body rod protein [Planococcus donghaensis MPA1U2]
          Length = 278

 Score = 33.7 bits (77), Expect = 7.8,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLDLLR 133
             G V+  NV++     DM  T R + +N + I+     M     ++ R
Sbjct: 229 KQGFVEQSNVDLTKTMTDMMTTYRGFESNQKVIQAYDRSMEKAVNEIGR 277


>gi|269138579|ref|YP_003295279.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
 gi|267984239|gb|ACY84068.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
 gi|304558589|gb|ADM41253.1| Flagellar basal-body rod protein FlgB [Edwardsiella tarda FL6-60]
          Length = 137

 Score = 33.7 bits (77), Expect = 7.8,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 9/41 (21%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          L  Q    +I++ NIANA T G       Y+ + I F   +
Sbjct: 18 LRAQRQ--EILAANIANADTPG-------YQARDIDFASQL 49


>gi|238799108|ref|ZP_04642564.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
           43969]
 gi|238717055|gb|EEQ08915.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
           43969]
          Length = 251

 Score = 33.7 bits (77), Expect = 7.8,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 GVLEGSNVKAVEAMTDMIANARSFEMQMKIIHSVDENEQRANQLL 248


>gi|188586014|ref|YP_001917559.1| flagellar basal-body rod protein FlgB [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350701|gb|ACB84971.1| flagellar basal-body rod protein FlgB [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 134

 Score = 33.7 bits (77), Expect = 7.8,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 31/97 (31%), Gaps = 26/97 (26%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI------------ 66
           + R ++IS NIAN  T G       ++R  + FEE +  +     K I            
Sbjct: 18  TKRHEVISNNIANVNTPG-------FKRGRVDFEEQLKEAMKADSKDIEGKITREKHIPI 70

Query: 67  --GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                        +    + N        NV+V  E 
Sbjct: 71  GKVDSTIEPQVRRESDSSMRNDDN-----NVDVDTEM 102


>gi|170021354|ref|YP_001726308.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC
          8739]
 gi|169756282|gb|ACA78981.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC
          8739]
          Length = 458

 Score = 33.7 bits (77), Expect = 7.8,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|323163702|gb|EFZ49522.1| flagellar basal-body rod protein flgF domain protein [Escherichia
           coli E128010]
          Length = 75

 Score = 33.7 bits (77), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 27  SGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 72


>gi|229178180|ref|ZP_04305551.1| Flagellar basal-body rod protein flgG [Bacillus cereus 172560W]
 gi|228605310|gb|EEK62760.1| Flagellar basal-body rod protein flgG [Bacillus cereus 172560W]
          Length = 257

 Score = 33.7 bits (77), Expect = 7.9,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 216 SNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEANEILR 257


>gi|162147479|ref|YP_001601940.1| flagellar basal-body rod protein flgF [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786056|emb|CAP55638.1| putative flagellar basal-body rod protein flgF [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 254

 Score = 33.7 bits (77), Expect = 7.9,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G+++  NVN + ET +M E  R Y    Q I+      +  +D
Sbjct: 203 QGMLESSNVNAVSETTEMVEIQRDYDLTFQLIQTESTRQSNAID 246


>gi|161503734|ref|YP_001570846.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865081|gb|ABX21704.1| hypothetical protein SARI_01819 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 251

 Score = 33.7 bits (77), Expect = 7.9,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 203 SGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|16760050|ref|NP_455667.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29142179|ref|NP_805521.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213161847|ref|ZP_03347557.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213424677|ref|ZP_03357442.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582034|ref|ZP_03363860.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213615929|ref|ZP_03371755.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648923|ref|ZP_03378976.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865508|ref|ZP_03387627.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289828583|ref|ZP_06546408.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|291084685|ref|ZP_06540939.2| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
 gi|25298905|pir||AG0639 probable flagellar basal-body rod protein FlgB (proximal rod
           protein) STY1213 [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16502344|emb|CAD08298.1| putative flagellar basal-body rod protein FlgB (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29137809|gb|AAO69370.1| putative flagellar basal-body rod protein FlgB [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 138

 Score = 33.7 bits (77), Expect = 7.9,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 40/128 (31%), Gaps = 29/128 (22%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--------SGGVRVKKI 66
           L  Q    +I++ NIANA T G       Y+ + I F   +          +GGV +   
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFASELKKVMVRGREETGGVALSLT 68

Query: 67  GVDQSTFVEEFDPG------HPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTI- 118
                       P        P   +  G      V++  E     + +  Y   L  + 
Sbjct: 69  SSRHIPAQAVSSPAVDLLYRVPDQPSLDGN----TVDMDRERTQFADNSLKYQMGLTVLG 124

Query: 119 KQSHDMMT 126
            Q   MM 
Sbjct: 125 SQLKGMMN 132


>gi|75762829|ref|ZP_00742649.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228900355|ref|ZP_04064584.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL
           4222]
 gi|74489683|gb|EAO53079.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228859242|gb|EEN03673.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL
           4222]
          Length = 259

 Score = 33.7 bits (77), Expect = 7.9,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
            NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 218 SNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEANEILR 259


>gi|53724562|ref|YP_104795.1| flagellar basal body rod protein FlgB [Burkholderia mallei ATCC
          23344]
 gi|67641535|ref|ZP_00440312.1| flagellar basal-body rod protein FlgB [Burkholderia mallei GB8
          horse 4]
 gi|121600142|ref|YP_994288.1| flagellar basal body rod protein FlgB [Burkholderia mallei SAVP1]
 gi|124384637|ref|YP_001028063.1| flagellar basal body rod protein FlgB [Burkholderia mallei NCTC
          10229]
 gi|126450078|ref|YP_001082870.1| flagellar basal body rod protein FlgB [Burkholderia mallei NCTC
          10247]
 gi|126451866|ref|YP_001064561.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          1106a]
 gi|167001533|ref|ZP_02267328.1| flagellar basal-body rod protein FlgB [Burkholderia mallei
          PRL-20]
 gi|167813798|ref|ZP_02445478.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          91]
 gi|167822315|ref|ZP_02453786.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          9]
 gi|167892407|ref|ZP_02479809.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          7894]
 gi|167900905|ref|ZP_02488110.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          NCTC 13177]
 gi|167917161|ref|ZP_02504252.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          BCC215]
 gi|217424904|ref|ZP_03456400.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          576]
 gi|226199738|ref|ZP_03795289.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          Pakistan 9]
 gi|242317296|ref|ZP_04816312.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1106b]
 gi|254174732|ref|ZP_04881393.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC
          10399]
 gi|254182143|ref|ZP_04888740.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1655]
 gi|254188073|ref|ZP_04894585.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          Pasteur 52237]
 gi|254196553|ref|ZP_04902977.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          S13]
 gi|254201893|ref|ZP_04908257.1| flagellar basal-body rod protein FlgB [Burkholderia mallei FMH]
 gi|254207227|ref|ZP_04913578.1| flagellar basal-body rod protein FlgB [Burkholderia mallei JHU]
 gi|254359729|ref|ZP_04976000.1| flagellar basal-body rod protein FlgB [Burkholderia mallei
          2002721280]
 gi|52427985|gb|AAU48578.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC
          23344]
 gi|121228952|gb|ABM51470.1| flagellar basal-body rod protein FlgB [Burkholderia mallei SAVP1]
 gi|124292657|gb|ABN01926.1| flagellar basal-body rod protein FlgB [Burkholderia mallei NCTC
          10229]
 gi|126225508|gb|ABN89048.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1106a]
 gi|126242948|gb|ABO06041.1| flagellar basal-body rod protein FlgB [Burkholderia mallei NCTC
          10247]
 gi|147747787|gb|EDK54863.1| flagellar basal-body rod protein FlgB [Burkholderia mallei FMH]
 gi|147752769|gb|EDK59835.1| flagellar basal-body rod protein FlgB [Burkholderia mallei JHU]
 gi|148028943|gb|EDK86875.1| flagellar basal-body rod protein FlgB [Burkholderia mallei
          2002721280]
 gi|157935753|gb|EDO91423.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          Pasteur 52237]
 gi|160695777|gb|EDP85747.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC
          10399]
 gi|169653296|gb|EDS85989.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          S13]
 gi|184212681|gb|EDU09724.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1655]
 gi|217391924|gb|EEC31950.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          576]
 gi|225928089|gb|EEH24125.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          Pakistan 9]
 gi|238522486|gb|EEP85930.1| flagellar basal-body rod protein FlgB [Burkholderia mallei GB8
          horse 4]
 gi|242140535|gb|EES26937.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1106b]
 gi|243062735|gb|EES44921.1| flagellar basal-body rod protein FlgB [Burkholderia mallei
          PRL-20]
          Length = 163

 Score = 33.7 bits (77), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       YR + + F   +  +
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YRARDVDFSSTLARA 52


>gi|145298497|ref|YP_001141338.1| flagellar hook-associated protein FlgK [Aeromonas salmonicida
          subsp. salmonicida A449]
 gi|142851269|gb|ABO89590.1| flagellar hook-associated protein FlgK [Aeromonas salmonicida
          subsp. salmonicida A449]
          Length = 666

 Score = 33.7 bits (77), Expect = 7.9,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 5/91 (5%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I  SG+  Q   +Q  S NI N  +           R  I    V  G+G +   ++ 
Sbjct: 6  LGIGTSGVLAQQRLLQTTSNNIVNVNS-----QGYVRERTLIYTNSVGMGTGDMLTDRVI 60

Query: 68 VDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
             +      D     A+AS   +  N ++L
Sbjct: 61 NTYAQGEVRRDTSAYYASASRYEQLSNTDIL 91


>gi|34556699|ref|NP_906514.1| flagellar hook-associated protein FlgK [Wolinella succinogenes
          DSM 1740]
 gi|34482413|emb|CAE09414.1| FLAGELLAR HOOK-ASSOCIATED PROTEIN 1 [Wolinella succinogenes]
          Length = 609

 Score = 33.7 bits (77), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 7/49 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
          M  + +S ++A +GL      + +   NIANA        ++ Y R+ +
Sbjct: 1  MASIFSSLNLAYTGLQTHQVMVSVTGNNIANAS-------NEFYSRQRV 42


>gi|331645424|ref|ZP_08346528.1| flagellar hook-associated protein FlgK [Escherichia coli M605]
 gi|59889786|emb|CAH19142.1| Lateral flagellar hook associated protein 1 (FlgK-like)
          [Escherichia coli]
 gi|284920050|emb|CBG33107.1| lateral flagellar hook associated protein 1 (FlgK-like)
          [Escherichia coli 042]
 gi|331045586|gb|EGI17712.1| flagellar hook-associated protein FlgK [Escherichia coli M605]
          Length = 458

 Score = 33.7 bits (77), Expect = 8.0,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|5361014|gb|AAD42921.1|U12817_15 polar flagellar hook associated protein type 1 [Vibrio
           parahaemolyticus]
          Length = 658

 Score = 33.7 bits (77), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 621 VNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 657


>gi|62179695|ref|YP_216112.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62127328|gb|AAX65031.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
          Length = 251

 Score = 33.7 bits (77), Expect = 8.0,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 203 SGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|16129036|ref|NP_415591.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli str. K-12 substr. MG1655]
 gi|24112484|ref|NP_706994.1| flagellar basal body rod protein FlgB [Shigella flexneri 2a str.
          301]
 gi|26247213|ref|NP_753253.1| flagellar basal body rod protein FlgB [Escherichia coli CFT073]
 gi|30062611|ref|NP_836782.1| flagellar basal body rod protein FlgB [Shigella flexneri 2a str.
          2457T]
 gi|74311635|ref|YP_310054.1| flagellar basal body rod protein FlgB [Shigella sonnei Ss046]
 gi|89107919|ref|AP_001699.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli str. K-12 substr. W3110]
 gi|110641249|ref|YP_668979.1| flagellar basal body rod protein FlgB [Escherichia coli 536]
 gi|110805091|ref|YP_688611.1| flagellar basal body rod protein FlgB [Shigella flexneri 5 str.
          8401]
 gi|157157889|ref|YP_001462307.1| flagellar basal body rod protein FlgB [Escherichia coli E24377A]
 gi|157160600|ref|YP_001457918.1| flagellar basal body rod protein FlgB [Escherichia coli HS]
 gi|170020531|ref|YP_001725485.1| flagellar basal body rod protein FlgB [Escherichia coli ATCC
          8739]
 gi|170080724|ref|YP_001730044.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli str. K-12 substr. DH10B]
 gi|170683265|ref|YP_001744107.1| flagellar basal body rod protein FlgB [Escherichia coli SMS-3-5]
 gi|187732438|ref|YP_001880755.1| flagellar basal body rod protein FlgB [Shigella boydii CDC
          3083-94]
 gi|191168464|ref|ZP_03030252.1| flagellar basal-body rod protein FlgB [Escherichia coli B7A]
 gi|191172447|ref|ZP_03033988.1| flagellar basal-body rod protein FlgB [Escherichia coli F11]
 gi|193064567|ref|ZP_03045647.1| flagellar basal-body rod protein FlgB [Escherichia coli E22]
 gi|193069459|ref|ZP_03050413.1| flagellar basal-body rod protein FlgB [Escherichia coli E110019]
 gi|194428410|ref|ZP_03060950.1| flagellar basal-body rod protein FlgB [Escherichia coli B171]
 gi|194438104|ref|ZP_03070197.1| flagellar basal-body rod protein FlgB [Escherichia coli 101-1]
 gi|209918327|ref|YP_002292411.1| flagellar basal body rod protein FlgB [Escherichia coli SE11]
 gi|218553652|ref|YP_002386565.1| flagellar basal body rod protein FlgB [Escherichia coli IAI1]
 gi|218694607|ref|YP_002402274.1| flagellar basal body rod protein FlgB [Escherichia coli 55989]
 gi|218700424|ref|YP_002408053.1| flagellar basal body rod protein FlgB [Escherichia coli IAI39]
 gi|218704481|ref|YP_002412000.1| flagellar basal body rod protein FlgB [Escherichia coli UMN026]
 gi|227886569|ref|ZP_04004374.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli 83972]
 gi|238900327|ref|YP_002926123.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli BW2952]
 gi|256018670|ref|ZP_05432535.1| flagellar basal body rod protein FlgB [Shigella sp. D9]
 gi|256023229|ref|ZP_05437094.1| flagellar basal body rod protein FlgB [Escherichia sp. 4_1_40B]
 gi|260843313|ref|YP_003221091.1| flagellar component FlgB of cell-proximal portion of basal-body
          rod [Escherichia coli O103:H2 str. 12009]
 gi|260854556|ref|YP_003228447.1| flagellar component FlgB of cell-proximal portion of basal-body
          rod [Escherichia coli O26:H11 str. 11368]
 gi|260867436|ref|YP_003233838.1| flagellar component FlgB of cell-proximal portion of basal-body
          rod [Escherichia coli O111:H- str. 11128]
 gi|293404357|ref|ZP_06648351.1| flgB [Escherichia coli FVEC1412]
 gi|293409439|ref|ZP_06653015.1| flagellar basal-body rod protein FlgB [Escherichia coli B354]
 gi|293414368|ref|ZP_06657017.1| flagellar basal-body rod protein FlgB [Escherichia coli B185]
 gi|293433363|ref|ZP_06661791.1| flagellar basal-body rod protein FlgB [Escherichia coli B088]
 gi|298380137|ref|ZP_06989742.1| flagellar basal-body rod protein FlgB [Escherichia coli FVEC1302]
 gi|300816775|ref|ZP_07096995.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 107-1]
 gi|300821146|ref|ZP_07101295.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 119-7]
 gi|300899592|ref|ZP_07117831.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 198-1]
 gi|300902464|ref|ZP_07120446.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 84-1]
 gi|300918675|ref|ZP_07135256.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 115-1]
 gi|300922599|ref|ZP_07138699.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 182-1]
 gi|300928375|ref|ZP_07143909.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 187-1]
 gi|300950168|ref|ZP_07164113.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 116-1]
 gi|300954387|ref|ZP_07166841.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 175-1]
 gi|300974377|ref|ZP_07172589.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 45-1]
 gi|300982624|ref|ZP_07176208.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 200-1]
 gi|301023260|ref|ZP_07187057.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 69-1]
 gi|301029712|ref|ZP_07192766.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 196-1]
 gi|301051143|ref|ZP_07197973.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 185-1]
 gi|301304988|ref|ZP_07211090.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 124-1]
 gi|301328557|ref|ZP_07221618.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 78-1]
 gi|301644985|ref|ZP_07244951.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 146-1]
 gi|306814078|ref|ZP_07448251.1| flagellar basal body rod protein FlgB [Escherichia coli NC101]
 gi|307137708|ref|ZP_07497064.1| flagellar basal body rod protein FlgB [Escherichia coli H736]
 gi|307310149|ref|ZP_07589799.1| flagellar basal-body rod protein FlgB [Escherichia coli W]
 gi|309798067|ref|ZP_07692442.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 145-7]
 gi|312971210|ref|ZP_07785388.1| flagellar basal-body rod protein FlgB [Escherichia coli 1827-70]
 gi|331641617|ref|ZP_08342752.1| flagellar basal-body rod protein FlgB [Escherichia coli H736]
 gi|331652126|ref|ZP_08353145.1| flagellar basal-body rod protein FlgB [Escherichia coli M718]
 gi|331662479|ref|ZP_08363402.1| flagellar basal-body rod protein FlgB [Escherichia coli TA143]
 gi|331667473|ref|ZP_08368337.1| flagellar basal-body rod protein FlgB [Escherichia coli TA271]
 gi|331672593|ref|ZP_08373382.1| flagellar basal-body rod protein FlgB [Escherichia coli TA280]
 gi|331676864|ref|ZP_08377560.1| flagellar basal-body rod protein FlgB [Escherichia coli H591]
 gi|331682575|ref|ZP_08383194.1| flagellar basal-body rod protein FlgB [Escherichia coli H299]
 gi|332279739|ref|ZP_08392152.1| flagellar component of cell-proximal portion of basal-body rod
          [Shigella sp. D9]
 gi|78100008|sp|P0ABX0|FLGB_ECOL6 RecName: Full=Flagellar basal-body rod protein flgB; AltName:
          Full=Putative proximal rod protein
 gi|78100009|sp|P0ABW9|FLGB_ECOLI RecName: Full=Flagellar basal-body rod protein flgB; AltName:
          Full=Putative proximal rod protein
 gi|78100010|sp|P0ABX1|FLGB_SHIFL RecName: Full=Flagellar basal-body rod protein flgB; AltName:
          Full=Putative proximal rod protein
 gi|26107614|gb|AAN79813.1|AE016759_87 Flagellar basal-body rod protein flgB [Escherichia coli CFT073]
 gi|1787313|gb|AAC74157.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli str. K-12 substr. MG1655]
 gi|4062650|dbj|BAA35881.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli str. K12 substr. W3110]
 gi|24051370|gb|AAN42701.1| flagellar basal-body rod protein FlgB (proximal rod protein)
          [Shigella flexneri 2a str. 301]
 gi|30040857|gb|AAP16588.1| flagellar basal-body rod protein FlgB (proximal rod protein)
          [Shigella flexneri 2a str. 2457T]
 gi|73855112|gb|AAZ87819.1| flagellar protein for cell-proximal portion of basal-body rod
          [Shigella sonnei Ss046]
 gi|110342841|gb|ABG69078.1| flagellar basal-body rod protein FlgB [Escherichia coli 536]
 gi|110614639|gb|ABF03306.1| Flagellar basal body protein [Shigella flexneri 5 str. 8401]
 gi|157066280|gb|ABV05535.1| flagellar basal-body rod protein FlgB [Escherichia coli HS]
 gi|157079919|gb|ABV19627.1| flagellar basal-body rod protein FlgB [Escherichia coli E24377A]
 gi|169755459|gb|ACA78158.1| flagellar basal-body rod protein FlgB [Escherichia coli ATCC
          8739]
 gi|169888559|gb|ACB02266.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli str. K-12 substr. DH10B]
 gi|170520983|gb|ACB19161.1| flagellar basal-body rod protein FlgB [Escherichia coli SMS-3-5]
 gi|187429430|gb|ACD08704.1| flagellar basal-body rod protein FlgB [Shigella boydii CDC
          3083-94]
 gi|190901483|gb|EDV61244.1| flagellar basal-body rod protein FlgB [Escherichia coli B7A]
 gi|190907331|gb|EDV66929.1| flagellar basal-body rod protein FlgB [Escherichia coli F11]
 gi|192927819|gb|EDV82433.1| flagellar basal-body rod protein FlgB [Escherichia coli E22]
 gi|192957207|gb|EDV87656.1| flagellar basal-body rod protein FlgB [Escherichia coli E110019]
 gi|194413462|gb|EDX29744.1| flagellar basal-body rod protein FlgB [Escherichia coli B171]
 gi|194423040|gb|EDX39034.1| flagellar basal-body rod protein FlgB [Escherichia coli 101-1]
 gi|209911586|dbj|BAG76660.1| flagellar basal-body rod protein FlgB [Escherichia coli SE11]
 gi|218351339|emb|CAU97045.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli 55989]
 gi|218360420|emb|CAQ97972.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli IAI1]
 gi|218370410|emb|CAR18217.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli IAI39]
 gi|218431578|emb|CAR12457.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli UMN026]
 gi|227836773|gb|EEJ47239.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli 83972]
 gi|238861101|gb|ACR63099.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli BW2952]
 gi|257753205|dbj|BAI24707.1| flagellar component FlgB of cell-proximal portion of basal-body
          rod [Escherichia coli O26:H11 str. 11368]
 gi|257758460|dbj|BAI29957.1| flagellar component FlgB of cell-proximal portion of basal-body
          rod [Escherichia coli O103:H2 str. 12009]
 gi|257763792|dbj|BAI35287.1| flagellar component FlgB of cell-proximal portion of basal-body
          rod [Escherichia coli O111:H- str. 11128]
 gi|260449787|gb|ACX40209.1| flagellar basal-body rod protein FlgB [Escherichia coli DH1]
 gi|281600493|gb|ADA73477.1| Flagellar basal-body rod protein flgB [Shigella flexneri 2002017]
 gi|284920896|emb|CBG33959.1| flagellar basal-body rod protein FlgB [Escherichia coli 042]
 gi|291324182|gb|EFE63604.1| flagellar basal-body rod protein FlgB [Escherichia coli B088]
 gi|291428943|gb|EFF01968.1| flgB [Escherichia coli FVEC1412]
 gi|291434426|gb|EFF07399.1| flagellar basal-body rod protein FlgB [Escherichia coli B185]
 gi|291469907|gb|EFF12391.1| flagellar basal-body rod protein FlgB [Escherichia coli B354]
 gi|298279835|gb|EFI21343.1| flagellar basal-body rod protein FlgB [Escherichia coli FVEC1302]
 gi|299877400|gb|EFI85611.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 196-1]
 gi|300297164|gb|EFJ53549.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 185-1]
 gi|300307089|gb|EFJ61609.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 200-1]
 gi|300318623|gb|EFJ68407.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 175-1]
 gi|300356863|gb|EFJ72733.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 198-1]
 gi|300397105|gb|EFJ80643.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 69-1]
 gi|300405496|gb|EFJ89034.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 84-1]
 gi|300410620|gb|EFJ94158.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 45-1]
 gi|300414169|gb|EFJ97479.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 115-1]
 gi|300421076|gb|EFK04387.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 182-1]
 gi|300450515|gb|EFK14135.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 116-1]
 gi|300463633|gb|EFK27126.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 187-1]
 gi|300526445|gb|EFK47514.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 119-7]
 gi|300530549|gb|EFK51611.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 107-1]
 gi|300839706|gb|EFK67466.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 124-1]
 gi|300844949|gb|EFK72709.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 78-1]
 gi|301076714|gb|EFK91520.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 146-1]
 gi|305852715|gb|EFM53163.1| flagellar basal body rod protein FlgB [Escherichia coli NC101]
 gi|306909867|gb|EFN40361.1| flagellar basal-body rod protein FlgB [Escherichia coli W]
 gi|307553075|gb|ADN45850.1| flagellar basal-body rod protein FlgB [Escherichia coli ABU
          83972]
 gi|308118350|gb|EFO55612.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 145-7]
 gi|309701345|emb|CBJ00646.1| flagellar basal-body rod protein FlgB [Escherichia coli ETEC
          H10407]
 gi|310336412|gb|EFQ01598.1| flagellar basal-body rod protein FlgB [Escherichia coli 1827-70]
 gi|313650477|gb|EFS14884.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2a str.
          2457T]
 gi|315060351|gb|ADT74678.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli W]
 gi|315135705|dbj|BAJ42864.1| flgB [Escherichia coli DH1]
 gi|315253874|gb|EFU33842.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 85-1]
 gi|315291067|gb|EFU50430.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 153-1]
 gi|315618243|gb|EFU98833.1| flagellar basal-body rod protein FlgB [Escherichia coli 3431]
 gi|320173526|gb|EFW48722.1| Flagellar basal-body rod protein FlgB [Shigella dysenteriae CDC
          74-1112]
 gi|320200969|gb|EFW75553.1| Flagellar basal-body rod protein FlgB [Escherichia coli EC4100B]
 gi|323156880|gb|EFZ43014.1| flagellar basal-body rod protein FlgB [Escherichia coli EPECa14]
 gi|323163755|gb|EFZ49574.1| flagellar basal-body rod protein FlgB [Escherichia coli E128010]
 gi|323165581|gb|EFZ51368.1| flagellar basal-body rod protein FlgB [Shigella sonnei 53G]
 gi|323174798|gb|EFZ60413.1| flagellar basal-body rod protein FlgB [Escherichia coli LT-68]
 gi|323175696|gb|EFZ61290.1| flagellar basal-body rod protein FlgB [Escherichia coli 1180]
 gi|323185804|gb|EFZ71165.1| flagellar basal-body rod protein FlgB [Escherichia coli 1357]
 gi|323379088|gb|ADX51356.1| flagellar basal-body rod protein FlgB [Escherichia coli KO11]
 gi|323937813|gb|EGB34077.1| flagellar basal-body rod protein FlgB [Escherichia coli E1520]
 gi|323942542|gb|EGB38709.1| flagellar basal-body rod protein FlgB [Escherichia coli E482]
 gi|323962672|gb|EGB58250.1| flagellar basal-body rod protein FlgB [Escherichia coli H489]
 gi|323973338|gb|EGB68527.1| flagellar basal-body rod protein FlgB [Escherichia coli TA007]
 gi|324013347|gb|EGB82566.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 60-1]
 gi|324017423|gb|EGB86642.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 117-3]
 gi|324117356|gb|EGC11263.1| flagellar basal-body rod protein FlgB [Escherichia coli E1167]
 gi|331038415|gb|EGI10635.1| flagellar basal-body rod protein FlgB [Escherichia coli H736]
 gi|331050404|gb|EGI22462.1| flagellar basal-body rod protein FlgB [Escherichia coli M718]
 gi|331060901|gb|EGI32865.1| flagellar basal-body rod protein FlgB [Escherichia coli TA143]
 gi|331065058|gb|EGI36953.1| flagellar basal-body rod protein FlgB [Escherichia coli TA271]
 gi|331070236|gb|EGI41602.1| flagellar basal-body rod protein FlgB [Escherichia coli TA280]
 gi|331075553|gb|EGI46851.1| flagellar basal-body rod protein FlgB [Escherichia coli H591]
 gi|331080206|gb|EGI51385.1| flagellar basal-body rod protein FlgB [Escherichia coli H299]
 gi|332102091|gb|EGJ05437.1| flagellar component of cell-proximal portion of basal-body rod
          [Shigella sp. D9]
 gi|332342619|gb|AEE55953.1| flagellar basal-body rod protein FlgB [Escherichia coli UMNK88]
 gi|332758231|gb|EGJ88554.1| flagellar basal-body rod protein FlgB [Shigella flexneri 4343-70]
 gi|332759615|gb|EGJ89920.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2747-71]
 gi|332761417|gb|EGJ91701.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-671]
 gi|332767679|gb|EGJ97872.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2930-71]
 gi|333005507|gb|EGK25025.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-218]
 gi|333008274|gb|EGK27748.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-272]
 gi|333019331|gb|EGK38614.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-304]
 gi|333019764|gb|EGK39036.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-227]
          Length = 138

 Score = 33.7 bits (77), Expect = 8.0,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 14/60 (23%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          L  Q    ++++ NIANA T G       Y+ + I F   +      +V + G D ++ V
Sbjct: 18 LRAQRQ--EVLAANIANADTPG-------YQARDIDFASELK-----KVMQRGRDATSVV 63


>gi|312884833|ref|ZP_07744525.1| putative flagellar basal-body rod protein [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309367485|gb|EFP95045.1| putative flagellar basal-body rod protein [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 243

 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 24/65 (36%), Gaps = 9/65 (13%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V     D    V+   P H        ++  NV+ + E  ++   +R +    + +K + 
Sbjct: 180 VTGNPFDADPLVQV-APEH--------IEGSNVSAIDELVNVMSLSRNFEMQFRMMKTAE 230

Query: 123 DMMTT 127
            +  +
Sbjct: 231 TLAKS 235


>gi|295096228|emb|CBK85318.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae
          subsp. cloacae NCTC 9394]
          Length = 138

 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 9/42 (21%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          L  Q    +I++ NIANA T G       Y+ + I F   + 
Sbjct: 18 LRAQRQ--EILAANIANADTPG-------YQARDIDFSSELK 50


>gi|254994393|ref|ZP_05276583.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-064]
          Length = 62

 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 20  EGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 62


>gi|239996708|ref|ZP_04717232.1| Flagellar hook-associated protein [Alteromonas macleodii ATCC
          27126]
          Length = 680

 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTG 36
            +A SG+   S  +Q  S NIAN  T G
Sbjct: 7  FSLATSGVNASSKLLQTTSNNIANVNTPG 35


>gi|188492642|ref|ZP_02999912.1| flagellar hook-associated protein FlgK [Escherichia coli 53638]
 gi|188487841|gb|EDU62944.1| flagellar hook-associated protein FlgK [Escherichia coli 53638]
          Length = 458

 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|330892783|gb|EGH25444.1| flagellar hook protein FlgE [Pseudomonas syringae pv. mori str.
          301020]
          Length = 280

 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          S + A SG+   + R+++   NIAN+ T G       ++     F  +   S 
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANSGTIG-------FKSSRAQFSALYSASQ 47


>gi|323527712|ref|YP_004229865.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1001]
 gi|323384714|gb|ADX56805.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1001]
          Length = 252

 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           DP   VA AS  ++  NVN +     M    R +    + ++ +         LL
Sbjct: 197 DPTVAVAPAS--LEGSNVNPVSAMVSMITNARQFQMQTKLLESADKNDQAANQLL 249


>gi|281178182|dbj|BAI54512.1| flagellar basal-body rod protein FlgB [Escherichia coli SE15]
          Length = 138

 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 14/60 (23%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          L  Q    ++++ NIANA T G       Y+ + I F   +      +V + G D ++ V
Sbjct: 18 LRAQRQ--EVLAANIANADTPG-------YQARDIDFASELK-----KVMQRGRDATSVV 63


>gi|225552255|ref|ZP_03773195.1| flagellar basal-body rod protein FlgB [Borrelia sp. SV1]
 gi|225371253|gb|EEH00683.1| flagellar basal-body rod protein FlgB [Borrelia sp. SV1]
          Length = 135

 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    S   ++  L V S R  +IS+NIAN  T         ++R  ISFE  +  +
Sbjct: 1  MNDFERSVDFSHRYLDVLSLRQSVISDNIANVDTPN-------FKRSKISFESELEKA 51


>gi|117923397|ref|YP_864014.1| flagellar hook-associated protein FlgK [Magnetococcus sp. MC-1]
 gi|117607153|gb|ABK42608.1| flagellar hook-associated protein FlgK [Magnetococcus sp. MC-1]
          Length = 588

 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 21/41 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E  D+    R + A+ + +  + +++ + + ++R
Sbjct: 548 SGVSLEEELTDLMRFQRAFQASSKMVVTADELLQSVIGMVR 588


>gi|271500063|ref|YP_003333088.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech586]
 gi|270343618|gb|ACZ76383.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech586]
          Length = 139

 Score = 33.7 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 33/130 (25%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--------GSGGVRVKKI 66
           L  Q    +I++ NIANA T G       Y+ + I F   ++         +  V +   
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFASELNKVMEQGRTSNQSVSLNLT 68

Query: 67  --------GVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                    V+       +  P  P  + +       V++  E  +  + +  Y ++L  
Sbjct: 69  STRHIPAQAVEPPALDLLYRVPTQPALDGN------TVDMDRERTNFADNSLKYQSSLTL 122

Query: 118 IK-QSHDMMT 126
           I  Q   MM+
Sbjct: 123 ISGQIKGMMS 132


>gi|209963544|ref|YP_002296459.1| flagellar basal-body rod protein FlgB, putative [Rhodospirillum
          centenum SW]
 gi|209957010|gb|ACI97646.1| flagellar basal-body rod protein FlgB, putative [Rhodospirillum
          centenum SW]
          Length = 131

 Score = 33.7 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 18/63 (28%)

Query: 8  AHIANSGL-AVQSARMQ-------IISENIANARTTGDTPGSDPYRRKTI---SFEEVMH 56
            +A  GL  + S RM        +I+EN+ANA + G       YR K +    F+  M 
Sbjct: 1  MDLAAIGLFHLASRRMDYLGARHQVIAENVANANSPG-------YRAKDLKGFDFQSAMQ 53

Query: 57 GSG 59
           + 
Sbjct: 54 SAA 56


>gi|111115119|ref|YP_709737.1| flagellar basal body rod protein FlgB [Borrelia afzelii PKo]
 gi|216263868|ref|ZP_03435862.1| flagellar basal-body rod protein FlgB [Borrelia afzelii ACA-1]
 gi|110890393|gb|ABH01561.1| flagellar basal-body rod protein [Borrelia afzelii PKo]
 gi|215979912|gb|EEC20734.1| flagellar basal-body rod protein FlgB [Borrelia afzelii ACA-1]
          Length = 135

 Score = 33.7 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M+    S   ++  L V S R  +IS+NIAN  T         ++R  ISFE  +  +
Sbjct: 1  MNDFERSVDFSHRYLDVLSLRQSVISDNIANVDTPN-------FKRSKISFESELEKA 51


>gi|78067830|ref|YP_370599.1| flagellar hook-associated protein FlgK [Burkholderia sp. 383]
 gi|77968575|gb|ABB09955.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 660

 Score = 33.7 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+   E A++ +  + Y AN + I+ +  +  T L L
Sbjct: 620 SGVSTNEEAANLMQYQQFYQANAKVIQTAATLFQTVLGL 658


>gi|308068649|ref|YP_003870254.1| flagellar basal-body rod protein FlgB [Paenibacillus polymyxa E681]
 gi|305857928|gb|ADM69716.1| flagellar basal-body rod protein FlgB [Paenibacillus polymyxa E681]
          Length = 135

 Score = 33.7 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 18/127 (14%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPY-RRKTISFEEVMHGSGGVRVKKIGVDQST 72
           G+   + R +++++NI+NA T        PY +R  +SFEE++       V  +    + 
Sbjct: 15  GVQAANTRQRVMADNISNADT--------PYFKRSEVSFEELLQQQMDGDVTPLRGKVTN 66

Query: 73  FVE-EFDPGH--PVA--NASGI----VKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
               +  P +  P A     G         NV++  E + M E    Y   +Q I +   
Sbjct: 67  SRHFQIGPVNSIPDATVTKDGYSVMNNNMNNVDIDREMSLMAENQLRYNTYIQEINERIK 126

Query: 124 MMTTTLD 130
           MM T ++
Sbjct: 127 MMRTAVE 133


>gi|300936133|ref|ZP_07151072.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1]
 gi|300458711|gb|EFK22204.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1]
          Length = 458

 Score = 33.7 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|296103605|ref|YP_003613751.1| flagellar hook-associated protein 1 [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058064|gb|ADF62802.1| flagellar hook-associated protein 1 [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 545

 Score = 33.7 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 10/79 (12%)

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
            +   + GV+   +   ++    ++D                VN+  E  ++    + Y 
Sbjct: 476 TIGDRARGVK-SALVSAETDLRTKYDTKQ---------ALSGVNMDEEYINLDMFKQYYN 525

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN Q +K + DM    L +
Sbjct: 526 ANAQLLKTATDMFDALLSI 544


>gi|323171070|gb|EFZ56719.1| flagellar hook-associated protein FlgK [Escherichia coli LT-68]
          Length = 458

 Score = 33.7 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|296157455|ref|ZP_06840290.1| flagellar basal-body rod protein FlgF [Burkholderia sp. Ch1-1]
 gi|295892227|gb|EFG72010.1| flagellar basal-body rod protein FlgF [Burkholderia sp. Ch1-1]
          Length = 252

 Score = 33.7 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 12/60 (20%)

Query: 1  MDYLI-ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          MD LI  +   +   L  Q+    I++ N+ANA TTG       +R +  +F  V    G
Sbjct: 1  MDRLIYTAMSGSTQALEQQA----IVANNLANASTTG-------FRAQLATFRAVPMSFG 49


>gi|237753201|ref|ZP_04583681.1| flagellar basal-body rod protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375468|gb|EEO25559.1| flagellar basal-body rod protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 144

 Score = 33.7 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 39/138 (28%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI------------- 66
            R  +I+ NIAN  T         YR K ++FE++M     ++   I             
Sbjct: 22  LRRDMIASNIANVSTPM-------YRPKDVNFEQMM----ALKADDIFNRNRDLELDVAI 70

Query: 67  --------GVDQSTFVEE--FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
                     D+S +     +  GH +A   G     +V++ +ET++M + + +Y A + 
Sbjct: 71  TNKNHLLPAKDESPYRPTIFYRDGH-LARNDGN----SVDLDIETSEMGKNDIMYQALVG 125

Query: 117 TIKQSHDMMTTTLDLLRD 134
            +++   + T  +D  ++
Sbjct: 126 ALRKQGGIYTYAIDSSKN 143


>gi|163802597|ref|ZP_02196489.1| flagellar hook-associated protein K [Vibrio sp. AND4]
 gi|159173680|gb|EDP58499.1| flagellar hook-associated protein K [Vibrio sp. AND4]
          Length = 637

 Score = 33.7 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 598 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 636


>gi|53717911|ref|YP_106897.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          K96243]
 gi|76809258|ref|YP_331876.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          1710b]
 gi|134283584|ref|ZP_01770283.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          305]
 gi|167717657|ref|ZP_02400893.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          DM98]
 gi|167736700|ref|ZP_02409474.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          14]
 gi|167843905|ref|ZP_02469413.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          B7210]
 gi|167909124|ref|ZP_02496215.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          112]
 gi|254262000|ref|ZP_04953054.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1710a]
 gi|254295811|ref|ZP_04963268.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          406e]
 gi|52208325|emb|CAH34258.1| putative flagellar basal-body rod protein [Burkholderia
          pseudomallei K96243]
 gi|76578711|gb|ABA48186.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1710b]
 gi|134244993|gb|EBA45088.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          305]
 gi|157805665|gb|EDO82835.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          406e]
 gi|254220689|gb|EET10073.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1710a]
          Length = 163

 Score = 33.7 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       YR + + F   +  +
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YRARDVDFSSTLARA 52


>gi|256020234|ref|ZP_05434099.1| flagellar hook-associated protein FlgK [Shigella sp. D9]
 gi|300817263|ref|ZP_07097481.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          107-1]
 gi|332281396|ref|ZP_08393809.1| lateral flagellar hook associated protein 1 [Shigella sp. D9]
 gi|300530239|gb|EFK51301.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          107-1]
 gi|332103748|gb|EGJ07094.1| lateral flagellar hook associated protein 1 [Shigella sp. D9]
          Length = 458

 Score = 33.7 bits (77), Expect = 8.5,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|153839997|ref|ZP_01992664.1| flagellar hook-associated protein [Vibrio parahaemolyticus AQ3810]
 gi|149746457|gb|EDM57466.1| flagellar hook-associated protein [Vibrio parahaemolyticus AQ3810]
          Length = 375

 Score = 33.7 bits (77), Expect = 8.5,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 338 VNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 374


>gi|254251188|ref|ZP_04944506.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
 gi|124893797|gb|EAY67677.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
          Length = 173

 Score = 33.7 bits (77), Expect = 8.5,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       YR + + F   +  S
Sbjct: 25 ALDVRAYRQELLSSNIANADTPG-------YRARDVDFASTLARS 62


>gi|146311243|ref|YP_001176317.1| flagellar basal body rod protein FlgB [Enterobacter sp. 638]
 gi|145318119|gb|ABP60266.1| flagellar basal-body rod protein FlgB [Enterobacter sp. 638]
          Length = 138

 Score = 33.7 bits (77), Expect = 8.5,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 9/42 (21%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          L  Q    ++++ NIANA T G       Y+ + + F   + 
Sbjct: 18 LRAQRQ--EVLAGNIANADTPG-------YQARDMDFSSELK 50


>gi|82658726|gb|ABB88533.1| polyketide synthase type I [Streptomyces sp. Eco86]
          Length = 4290

 Score = 33.7 bits (77), Expect = 8.5,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISE 27
           MD ++     A S +  Q  R+++IS 
Sbjct: 773 MDPILDGMRQAASRVRWQRPRLRVISS 799


>gi|330860609|emb|CBX70906.1| flagellar basal-body rod protein flgB [Yersinia enterocolitica
          W22703]
          Length = 96

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 9/42 (21%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          +  Q    +I+S NIANA T G       ++ + I F   + 
Sbjct: 1  MRAQRQ--EILSSNIANADTPG-------FQARDIDFSSQLK 33


>gi|323191378|gb|EFZ76640.1| flagellar hook-associated protein FlgK [Escherichia coli RN587/1]
          Length = 458

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|316936688|gb|ADU60340.1| FlgB [Salmonella enterica subsp. enterica serovar Typhimurium]
          Length = 87

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 9/42 (21%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          L  Q    +I++ NIANA T G       Y+ + I F   + 
Sbjct: 12 LRAQRQ--EILAANIANADTPG-------YQARDIDFASELK 44


>gi|308050366|ref|YP_003913932.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM
          9799]
 gi|307632556|gb|ADN76858.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM
          9799]
          Length = 636

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANART 34
          +     IA SG+     +M + S NIAN  T
Sbjct: 1  MADLMSIARSGVLAAQKQMGVTSNNIANVGT 31


>gi|307313513|ref|ZP_07593134.1| flagellar hook-associated protein FlgK [Escherichia coli W]
 gi|306906681|gb|EFN37192.1| flagellar hook-associated protein FlgK [Escherichia coli W]
 gi|315059548|gb|ADT73875.1| flagellar hook-filament junction protein 1 [Escherichia coli W]
 gi|323181553|gb|EFZ66973.1| flagellar hook-associated protein FlgK [Escherichia coli 1357]
 gi|323379893|gb|ADX52161.1| flagellar hook-associated protein FlgK [Escherichia coli KO11]
          Length = 458

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|306813297|ref|ZP_07447490.1| flagellar hook-associated protein FlgK [Escherichia coli NC101]
 gi|305854060|gb|EFM54499.1| flagellar hook-associated protein FlgK [Escherichia coli NC101]
          Length = 458

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|28897559|ref|NP_797164.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|260364617|ref|ZP_05777219.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           K5030]
 gi|260878278|ref|ZP_05890633.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           AN-5034]
 gi|260898108|ref|ZP_05906604.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           Peru-466]
 gi|260901960|ref|ZP_05910355.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           AQ4037]
 gi|28805771|dbj|BAC59048.1| polar flagellar hook associated protein type 1 FlgK [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308086131|gb|EFO35826.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           Peru-466]
 gi|308090129|gb|EFO39824.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           AN-5034]
 gi|308106763|gb|EFO44303.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           AQ4037]
 gi|308115094|gb|EFO52634.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           K5030]
 gi|328473447|gb|EGF44295.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           10329]
          Length = 646

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 609 VNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 645


>gi|328543157|ref|YP_004303266.1| flagella basal body rod protein [polymorphum gilvum SL003B-26A1]
 gi|326412903|gb|ADZ69966.1| Flagella basal body rod protein [Polymorphum gilvum SL003B-26A1]
          Length = 245

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 19/35 (54%), Gaps = 7/35 (20%)

Query: 19 SARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
            ++ + + N+AN  T+G       ++ + ++FEE
Sbjct: 16 RRQLDVAANNMANMNTSG-------FKAQRLTFEE 43


>gi|269961605|ref|ZP_06175967.1| flagellar hook-associated protein 1 [Vibrio harveyi 1DA3]
 gi|269833646|gb|EEZ87743.1| flagellar hook-associated protein 1 [Vibrio harveyi 1DA3]
          Length = 637

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 598 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 636


>gi|260853472|ref|YP_003227363.1| putative lateral flagellar hook-filament junction protein
          [Escherichia coli O26:H11 str. 11368]
 gi|257752121|dbj|BAI23623.1| predicted lateral flagellar hook-filament junction protein
          [Escherichia coli O26:H11 str. 11368]
 gi|323158097|gb|EFZ44196.1| flagellar hook-associated protein FlgK [Escherichia coli EPECa14]
          Length = 458

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|255019026|ref|ZP_05291152.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           F2-515]
          Length = 168

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 7/28 (25%), Positives = 16/28 (57%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMA 113
            +G+++  NV++ VE   + +  R+  A
Sbjct: 123 QNGVIETSNVDLGVEMVQLMDNQRMVQA 150


>gi|229592133|ref|YP_002874252.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens
          SBW25]
 gi|312962591|ref|ZP_07777081.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens
          WH6]
 gi|229363999|emb|CAY51549.1| putative flagellar basal-body rod protein [Pseudomonas
          fluorescens SBW25]
 gi|311283171|gb|EFQ61762.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens
          WH6]
          Length = 135

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           +  I    L  ++ R ++++ NIANA T         Y+ + + F  V+    
Sbjct: 7  KALGIHEQALGFRAQRAEVLANNIANADTPN-------YKARDLDFSAVLAAQQ 53


>gi|156973594|ref|YP_001444501.1| flagellar hook-associated protein FlgK [Vibrio harveyi ATCC
           BAA-1116]
 gi|156525188|gb|ABU70274.1| hypothetical protein VIBHAR_01297 [Vibrio harveyi ATCC BAA-1116]
          Length = 637

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 598 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 636


>gi|148546713|ref|YP_001266815.1| flagellar hook-associated protein FlgK [Pseudomonas putida F1]
 gi|148510771|gb|ABQ77631.1| flagellar hook-associated protein FlgK [Pseudomonas putida F1]
          Length = 676

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 15/79 (18%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  +I  SGL    + M  +  NIANA         + Y R+    + V    GG +V
Sbjct: 1  MASLINIGMSGLGAAQSGMYTLGNNIANADV-------ESYSRQ----QNVQKTKGGQQV 49

Query: 64 KKI----GVDQSTFVEEFD 78
           ++    G   +     ++
Sbjct: 50 GQVFIGSGTTLADVRRVYN 68


>gi|153834473|ref|ZP_01987140.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01]
 gi|148869169|gb|EDL68201.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01]
          Length = 637

 Score = 33.7 bits (77), Expect = 8.7,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 598 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 636


>gi|320179227|gb|EFW54185.1| Flagellar basal-body rod protein FlgB [Shigella boydii ATCC 9905]
          Length = 138

 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 14/60 (23%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          L  Q    ++++ NIANA T G       Y+ + I F   +      +V + G D ++ V
Sbjct: 18 LRAQRQ--EVLAANIANADTPG-------YQARDIDFASELK-----KVMQRGRDATSVV 63


>gi|331666552|ref|ZP_08367426.1| flagellar hook-associated protein FlgK [Escherichia coli TA271]
 gi|331065776|gb|EGI37660.1| flagellar hook-associated protein FlgK [Escherichia coli TA271]
          Length = 458

 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|293408373|ref|ZP_06652212.1| flagellar hook-associated protein FlgK [Escherichia coli B354]
 gi|291471551|gb|EFF14034.1| flagellar hook-associated protein FlgK [Escherichia coli B354]
          Length = 458

 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 14/71 (19%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
          +   +I  SG +     + + ++N ANA TTG       Y R+      +    G     
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTG-------YTRQVAEISTIGASGGSPNSA 53

Query: 60 --GVRVKKIGV 68
            GV+V  I  
Sbjct: 54 GNGVQVDSIRR 64


>gi|16764534|ref|NP_460149.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161614599|ref|YP_001588564.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553034|ref|ZP_02346784.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167994042|ref|ZP_02575134.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234104|ref|ZP_02659162.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168237260|ref|ZP_02662318.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244777|ref|ZP_02669709.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264029|ref|ZP_02686002.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467130|ref|ZP_02700972.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194446055|ref|YP_002040432.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194449678|ref|YP_002045177.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194470312|ref|ZP_03076296.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194736339|ref|YP_002114177.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197265515|ref|ZP_03165589.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|198245943|ref|YP_002215959.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200390876|ref|ZP_03217487.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205353084|ref|YP_002226885.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857314|ref|YP_002243965.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224584318|ref|YP_002638116.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911002|ref|ZP_04654839.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|120298|sp|P16323|FLGF_SALTY RecName: Full=Flagellar basal-body rod protein flgF; AltName:
           Full=Putative proximal rod protein
 gi|47676|emb|CAA36313.1| flgF protein product (AA 1-251) [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|16419695|gb|AAL20108.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161363963|gb|ABX67731.1| hypothetical protein SPAB_02349 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404718|gb|ACF64940.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407982|gb|ACF68201.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194456676|gb|EDX45515.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194711841|gb|ACF91062.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630350|gb|EDX48976.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197243770|gb|EDY26390.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289883|gb|EDY29244.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197940459|gb|ACH77792.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199603321|gb|EDZ01867.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205272865|emb|CAR37794.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205322401|gb|EDZ10240.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328032|gb|EDZ14796.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331944|gb|EDZ18708.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336412|gb|EDZ23176.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205347326|gb|EDZ33957.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709117|emb|CAR33450.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224468845|gb|ACN46675.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|261246389|emb|CBG24198.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992952|gb|ACY87837.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157719|emb|CBW17211.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312912165|dbj|BAJ36139.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223796|gb|EFX48859.1| Flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616548|gb|EFY13457.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620511|gb|EFY17375.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622505|gb|EFY19350.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629656|gb|EFY26431.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632624|gb|EFY29370.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636881|gb|EFY33584.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641581|gb|EFY38219.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644071|gb|EFY40617.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650029|gb|EFY46447.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653954|gb|EFY50277.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658486|gb|EFY54748.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663344|gb|EFY59546.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670078|gb|EFY66218.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674858|gb|EFY70949.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676672|gb|EFY72739.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682594|gb|EFY78613.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686653|gb|EFY82632.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322714165|gb|EFZ05736.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129448|gb|ADX16878.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195767|gb|EFZ80943.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198341|gb|EFZ83445.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323209178|gb|EFZ94115.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209682|gb|EFZ94611.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217862|gb|EGA02577.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222150|gb|EGA06534.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224922|gb|EGA09180.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229664|gb|EGA13787.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232889|gb|EGA16985.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240624|gb|EGA24666.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242938|gb|EGA26959.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250255|gb|EGA34144.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252630|gb|EGA36468.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258842|gb|EGA42495.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261031|gb|EGA44624.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266940|gb|EGA50425.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269981|gb|EGA53430.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326623707|gb|EGE30052.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326628164|gb|EGE34507.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332988069|gb|AEF07052.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 251

 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 203 SGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|168822621|ref|ZP_02834621.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|204930894|ref|ZP_03221767.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204320353|gb|EDZ05557.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205340993|gb|EDZ27757.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320086382|emb|CBY96155.1| Flagellar basal-body rod protein flgF putative proximal rod protein
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
          Length = 251

 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 203 SGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|152980267|ref|YP_001353108.1| FlgB flagellar basal body protein [Janthinobacterium sp.
          Marseille]
 gi|151280344|gb|ABR88754.1| FlgB flagellar basal body protein [Janthinobacterium sp.
          Marseille]
          Length = 139

 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 7/46 (15%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          + L+++  R QI++ NIANA T         ++ + + F + + G+
Sbjct: 14 TALSLRGQRQQILASNIANADTPN-------FKARDVDFNKALQGA 52


>gi|77460472|ref|YP_349979.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens
          Pf0-1]
 gi|77384475|gb|ABA75988.1| putative flagellar basal-body rod protein FlgB (proximal rod
          protein) [Pseudomonas fluorescens Pf0-1]
          Length = 135

 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 9/46 (19%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          G   Q A  ++++ NIANA T         Y+ + + F +V+    
Sbjct: 17 GFRAQRA--EVLANNIANADTPN-------YKARDLEFSKVLEAQS 53


>gi|16760054|ref|NP_455671.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29142175|ref|NP_805517.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213161843|ref|ZP_03347553.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213424681|ref|ZP_03357446.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582038|ref|ZP_03363864.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213613180|ref|ZP_03371006.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648927|ref|ZP_03378980.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865504|ref|ZP_03387623.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289828579|ref|ZP_06546404.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25298925|pir||AC0640 probable flagellar basal-body rod protein FlgF (proximal rod
           protein) STY1217 [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16502348|emb|CAD08302.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29137805|gb|AAO69366.1| putative flagellar basal-body rod protein FlgF [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 251

 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 203 SGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|255030384|ref|ZP_05302335.1| flagellar hook protein FlgE [Listeria monocytogenes LO28]
          Length = 189

 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 147 EGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 189


>gi|213024454|ref|ZP_03338901.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhi str. 404ty]
          Length = 403

 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 21/82 (25%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
          + +  + A SGL    A +  +S NI N    G       Y R+T    +     G    
Sbjct: 12 MSSLINHAMSGLNAAQAALNTVSNNINNYNVAG-------YTRQTTILAQANSTLGAGGW 64

Query: 60 ---GVRVKKIGVDQSTFVEEFD 78
             GV V  +         E+D
Sbjct: 65 IGNGVYVSGV-------QREYD 79


>gi|197251378|ref|YP_002146865.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197215081|gb|ACH52478.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
          Length = 251

 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 203 SGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|146307872|ref|YP_001188337.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina ymp]
 gi|145576073|gb|ABP85605.1| flagellar basal-body rod protein FlgB [Pseudomonas mendocina ymp]
          Length = 135

 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 7/50 (14%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
           +  I    L  ++ R ++++ NIANA T         Y+ + + F  V+
Sbjct: 7  KALGIHEQALGFRAQRAEVLANNIANADTPN-------YKARDLDFASVL 49


>gi|56413835|ref|YP_150910.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362758|ref|YP_002142395.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56128092|gb|AAV77598.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197094235|emb|CAR59740.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 251

 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 203 SGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|257095362|ref|YP_003169003.1| flagellar basal-body rod protein FlgB [Candidatus Accumulibacter
          phosphatis clade IIA str. UW-1]
 gi|257047886|gb|ACV37074.1| flagellar basal-body rod protein FlgB [Candidatus Accumulibacter
          phosphatis clade IIA str. UW-1]
          Length = 136

 Score = 33.7 bits (77), Expect = 9.0,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 14/53 (26%)

Query: 13 SGLAVQSA-------RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          S L+ Q         R Q+++ NIANA T         YR +   F   +  +
Sbjct: 7  SALSFQQQALTLRAHRQQVLAANIANADTPN-------YRARDFDFAAALQNA 52


>gi|329901227|ref|ZP_08272752.1| Flagellar basal-body rod protein FlgB [Oxalobacteraceae bacterium
          IMCC9480]
 gi|327549159|gb|EGF33751.1| Flagellar basal-body rod protein FlgB [Oxalobacteraceae bacterium
          IMCC9480]
          Length = 150

 Score = 33.7 bits (77), Expect = 9.1,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 9/44 (20%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          L  Q  ++  I+ NIANA T         Y+ + I F   M  +
Sbjct: 18 LRGQRQQL--IASNIANADTPN-------YKARDIDFNSAMKSA 52


>gi|260597446|ref|YP_003210017.1| flagellar basal body rod protein FlgF [Cronobacter turicensis
           z3032]
 gi|260216623|emb|CBA29919.1| Flagellar basal-body rod protein flgF [Cronobacter turicensis
           z3032]
          Length = 252

 Score = 33.7 bits (77), Expect = 9.1,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 SGVLEGSNVKPVEAMTDMIANARRFEMQMKIISSVDENEQRANQLL 249


>gi|238751767|ref|ZP_04613255.1| hypothetical protein yrohd0001_35400 [Yersinia rohdei ATCC 43380]
 gi|238710038|gb|EEQ02268.1| hypothetical protein yrohd0001_35400 [Yersinia rohdei ATCC 43380]
          Length = 549

 Score = 33.7 bits (77), Expect = 9.1,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 14/66 (21%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE---VMHGSG----G 60
           + A SGL+     +  +S NI+N +  G       Y R+   F +    +  +G    G
Sbjct: 1  MNTAMSGLSAAQYGLSTVSNNISNYQVAG-------YNRQNAIFTQNGGTLSSAGFIGNG 53

Query: 61 VRVKKI 66
          V V  I
Sbjct: 54 VTVTGI 59


>gi|82544461|ref|YP_408408.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
 gi|81245872|gb|ABB66580.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
 gi|320186980|gb|EFW61693.1| Flagellar basal-body rod protein FlgB [Shigella flexneri CDC
          796-83]
 gi|332094098|gb|EGI99150.1| flagellar basal-body rod protein FlgB [Shigella boydii 3594-74]
          Length = 109

 Score = 33.7 bits (77), Expect = 9.1,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 14/60 (23%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          L  Q    ++++ NIANA T G       Y+ + I F   +      +V + G D ++ V
Sbjct: 18 LRAQRQ--EVLAANIANADTLG-------YQARDIDFASELK-----KVMQRGRDATSVV 63


>gi|326319103|ref|YP_004236775.1| flagellar hook-associated protein FlgK [Acidovorax avenae subsp.
          avenae ATCC 19860]
 gi|323375939|gb|ADX48208.1| flagellar hook-associated protein FlgK [Acidovorax avenae subsp.
          avenae ATCC 19860]
          Length = 643

 Score = 33.7 bits (77), Expect = 9.2,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 14/79 (17%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
          ++  ++    L      +Q    NIAN  T G       Y R+T+S + V          
Sbjct: 1  MSLLNVGARALLANQVALQTAGHNIANVNTAG-------YSRQTLSLQTVQGQFTGGGYI 53

Query: 58 SGGVRVKKIGVDQSTFVEE 76
            GV V+ I  +    +  
Sbjct: 54 GQGVDVQTILRNHDELLTR 72


>gi|209545588|ref|YP_002277817.1| flagellar basal body rod protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209533265|gb|ACI53202.1| flagellar basal body rod protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 247

 Score = 33.7 bits (77), Expect = 9.2,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G+++  NVN + ET  M E  R Y    Q I+      +  +D
Sbjct: 196 QGMLESSNVNAVSETTQMVEIQRDYDLTFQLIQTESTRQSNAID 239


>gi|261253608|ref|ZP_05946181.1| flagellar hook-associated protein FlgK [Vibrio orientalis CIP
          102891]
 gi|260936999|gb|EEX92988.1| flagellar hook-associated protein FlgK [Vibrio orientalis CIP
          102891]
          Length = 624

 Score = 33.7 bits (77), Expect = 9.2,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 23/69 (33%), Gaps = 8/69 (11%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
          A S L  Q   +     NI+N  T G       Y R+++     M    G     +GV  
Sbjct: 10 AQSVLTAQRQ-LNTTGHNISNVNTEG-------YSRQSVIQGTNMPRQYGGETYGMGVHV 61

Query: 71 STFVEEFDP 79
                +D 
Sbjct: 62 DKVRRSWDQ 70


>gi|94969949|ref|YP_591997.1| flagellar basal-body rod protein FlgG [Candidatus Koribacter
          versatilis Ellin345]
 gi|94551999|gb|ABF41923.1| flagellar basal-body rod protein FlgG [Candidatus Koribacter
          versatilis Ellin345]
          Length = 244

 Score = 33.7 bits (77), Expect = 9.2,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 7/56 (12%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +A +GL  +S ++ + ++++AN  T+G       YR +  +F  V+  S G  +  
Sbjct: 7  VACAGLVARSQQLDLAAQDLANINTSG-------YRSQRSAFRAVLAKSAGANLTG 55


>gi|56413839|ref|YP_150914.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362762|ref|YP_002142399.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56128096|gb|AAV77602.1| putative flagellar basal-body rod protein FlgB (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197094239|emb|CAR59744.1| putative flagellar basal-body rod protein FlgB (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 138

 Score = 33.7 bits (77), Expect = 9.2,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 40/128 (31%), Gaps = 29/128 (22%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--------SGGVRVKKI 66
           L  Q    +I++ NIANA T G       Y+ + I F   +          +GGV +   
Sbjct: 18  LRAQRQ--EILAANIANADTPG-------YQARDIDFTSELKKVMVRGREETGGVALTLT 68

Query: 67  GVDQSTFVEEFDPG------HPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTI- 118
                       P        P   +  G      V++  E     + +  Y   L  + 
Sbjct: 69  SSHHIPAQAVSSPAVDLLYRVPDQPSLDGN----TVDMDRERTQFADNSLKYQMGLTVLG 124

Query: 119 KQSHDMMT 126
            Q   MM 
Sbjct: 125 SQLKGMMN 132


>gi|324113872|gb|EGC07846.1| flagellar basal-body rod protein FlgF [Escherichia fergusonii B253]
 gi|325497615|gb|EGC95474.1| flagellar basal body rod protein FlgF [Escherichia fergusonii
           ECD227]
          Length = 251

 Score = 33.7 bits (77), Expect = 9.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM    R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVSAMSDMIANARRFEMQMKVISSVDDNEGRANQLL 248


>gi|229011065|ref|ZP_04168259.1| Flagellar basal-body rod protein flgG [Bacillus mycoides DSM 2048]
 gi|228750237|gb|EEM00069.1| Flagellar basal-body rod protein flgG [Bacillus mycoides DSM 2048]
          Length = 257

 Score = 33.7 bits (77), Expect = 9.4,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
           P    A  + +++  NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 202 PNGTGAVRNHMLENSNVDMTKEMADLMTNQKMIQASQRIMTSFDKIYEKEANEILR 257


>gi|218549195|ref|YP_002382986.1| flagellar basal body rod protein FlgF [Escherichia fergusonii ATCC
           35469]
 gi|218356736|emb|CAQ89364.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
          Length = 251

 Score = 33.7 bits (77), Expect = 9.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NVN +   +DM    R +   ++ I    D       LL
Sbjct: 203 SGVLEGSNVNAVSAMSDMIANARRFEMQMKVISSVDDNEGRANQLL 248


>gi|156934439|ref|YP_001438355.1| flagellar basal body rod protein FlgF [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532693|gb|ABU77519.1| hypothetical protein ESA_02270 [Cronobacter sakazakii ATCC BAA-894]
          Length = 252

 Score = 33.7 bits (77), Expect = 9.4,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 204 SGVLEGSNVKPVEAMTDMIANARRFEMQMKIITSVDENEQRANQLL 249


>gi|229541552|ref|ZP_04430612.1| flagellar hook-associated protein FlgK [Bacillus coagulans 36D1]
 gi|229325972|gb|EEN91647.1| flagellar hook-associated protein FlgK [Bacillus coagulans 36D1]
          Length = 538

 Score = 33.7 bits (77), Expect = 9.4,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 8/55 (14%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          M         A   L  Q   +  + +N+ANA T G       Y R+ ++ +   
Sbjct: 1  MSTFF-GLETAKRALTAQQNALYTVGQNVANANTDG-------YTRQRVNLQATD 47


>gi|21231840|ref|NP_637757.1| hypothetical protein XCC2403 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|21113558|gb|AAM41681.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
          Length = 98

 Score = 33.7 bits (77), Expect = 9.4,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 43/128 (33%), Gaps = 31/128 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+ V + R Q+ + N+A            P  R+ ++      G     V 
Sbjct: 1   MSISTIASSGMQVAALRQQVAASNVA-----RQPVEGSP--RQAVAASTQTGGGVTASVV 53

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
               D S                         +  +          + AN   +++S + 
Sbjct: 54  DAAADPSA------------------------LATDLVAGLSARNDFQANANVLRRSDEA 89

Query: 125 MTTTLDLL 132
           + + L++L
Sbjct: 90  LGSLLNVL 97


>gi|163939582|ref|YP_001644466.1| flagellar basal body rod protein FlgG [Bacillus weihenstephanensis
           KBAB4]
 gi|163861779|gb|ABY42838.1| flagellar basal body rod protein [Bacillus weihenstephanensis
           KBAB4]
          Length = 257

 Score = 33.7 bits (77), Expect = 9.4,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
           P    A  + +++  NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 202 PNGTGAVRNHMLENSNVDMTKEMADLMTNQKMIQASQRIMTSFDKIYEKEANEILR 257


>gi|330501143|ref|YP_004378012.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
           NK-01]
 gi|328915429|gb|AEB56260.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
           NK-01]
          Length = 455

 Score = 33.7 bits (77), Expect = 9.5,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 17/37 (45%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             V++  E  ++    + Y AN++ I  ++ +    L
Sbjct: 416 SAVSLDEEAVNLMTYQQAYQANMKVISTANQLFDDML 452


>gi|149202211|ref|ZP_01879184.1| Flagellar proximal rod protein FlgB [Roseovarius sp. TM1035]
 gi|149144309|gb|EDM32340.1| Flagellar proximal rod protein FlgB [Roseovarius sp. TM1035]
          Length = 128

 Score = 33.7 bits (77), Expect = 9.5,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 7/49 (14%)

Query: 12 NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           S L ++  R  +++ NIANA     TPG   ++ + + FE V++   G
Sbjct: 13 ASALNLREQRGAMLASNIANA----ATPG---FKARDMDFETVLNAETG 54


>gi|148546703|ref|YP_001266805.1| flagellar basal body rod protein FlgB [Pseudomonas putida F1]
 gi|148510761|gb|ABQ77621.1| flagellar basal-body rod protein FlgB [Pseudomonas putida F1]
 gi|313497758|gb|ADR59124.1| FlgB [Pseudomonas putida BIRD-1]
          Length = 136

 Score = 33.7 bits (77), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 9/45 (20%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          G   Q A  ++++ NIANA T         Y+ + + F  V+   
Sbjct: 17 GFRAQRA--EVLANNIANADTPN-------YKARDMDFSSVLAAE 52


>gi|95929873|ref|ZP_01312614.1| flagellar basal body rod protein [Desulfuromonas acetoxidans DSM
          684]
 gi|95134169|gb|EAT15827.1| flagellar basal body rod protein [Desulfuromonas acetoxidans DSM
          684]
          Length = 242

 Score = 33.7 bits (77), Expect = 9.5,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 13/67 (19%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------SGGVRVKKI 66
          SG   +   + +++ N++NA T G       Y++  + F  V+        +GGV    +
Sbjct: 10 SGAVARMQTVDVVTNNLSNANTLG-------YKKDRVQFSAVLDSAKQNQQAGGVNYSYV 62

Query: 67 GVDQSTF 73
           V ++ +
Sbjct: 63 EVAKTDY 69


>gi|168180910|ref|ZP_02615574.1| flagellar basal-body rod protein FlgB [Clostridium botulinum NCTC
          2916]
 gi|170758458|ref|YP_001787985.1| flagellar basal body rod protein FlgB [Clostridium botulinum A3
          str. Loch Maree]
 gi|169405447|gb|ACA53858.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A3
          str. Loch Maree]
 gi|182668259|gb|EDT80238.1| flagellar basal-body rod protein FlgB [Clostridium botulinum NCTC
          2916]
 gi|322806997|emb|CBZ04567.1| flagellar basal-body rod protein FlgB [Clostridium botulinum
          H04402 065]
          Length = 133

 Score = 33.7 bits (77), Expect = 9.6,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +   S R ++IS NIAN  T    P    Y+R  ++FEE +  +
Sbjct: 20 MDASSYRGKVISNNIANYNT----PD---YKRHYVTFEETLKDN 56


>gi|163750564|ref|ZP_02157802.1| hypothetical flagellar hook-associated protein [Shewanella
          benthica KT99]
 gi|161329719|gb|EDQ00708.1| hypothetical flagellar hook-associated protein [Shewanella
          benthica KT99]
          Length = 637

 Score = 33.7 bits (77), Expect = 9.6,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 7/74 (9%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA +G+    A++ + S NIAN  T         Y R+      +     G    
Sbjct: 3  MDLLNIARTGVLASQAQLAVTSNNIANVNT-------QGYHRQVAEQSSLESQRLGDHFY 55

Query: 65 KIGVDQSTFVEEFD 78
            G   S     ++
Sbjct: 56 GAGTYISDVKRIYN 69


>gi|23010476|ref|ZP_00051152.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 160

 Score = 33.4 bits (76), Expect = 9.6,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 11/101 (10%)

Query: 33  RTTGDTPGSDPYRRKTISFE--EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGI 89
             T  T      R + ++F   + +   G      +   Q+       P  P  +   G 
Sbjct: 62  DGTVSTNLGIRGRLRIVTFANPQALQSEG----ANLFSSQAPAR----PAGPGQHLEPGA 113

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV  +VE   + + NR Y      I +  D+  T + 
Sbjct: 114 LERSNVKPVVEMTRLMDVNRTYAMVSSVISRLDDLRGTAIR 154


>gi|126441479|ref|YP_001057319.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          668]
 gi|126220972|gb|ABN84478.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          668]
          Length = 163

 Score = 33.4 bits (76), Expect = 9.7,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           L V++ R +++S NIANA T G       YR + + F   +  +
Sbjct: 15 ALDVRAYRQELLSSNIANADTPG-------YRARDVDFSSTLARA 52


>gi|291334309|gb|ADD93970.1| predicted flagellar proximal rod protein [uncultured marine
          bacterium MedDCM-OCT-S09-C247]
          Length = 146

 Score = 33.4 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 7/53 (13%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            +    L ++S R +I++ NIAN      TP    ++ K + FE +++   G
Sbjct: 26 LRVHAEALNLRSQRNEILASNIAN----SATPN---FKAKDLDFEALLNSRMG 71


>gi|116694216|ref|YP_728427.1| flagellar basal body rod protein FlgB [Ralstonia eutropha H16]
 gi|113528715|emb|CAJ95062.1| flagellar basal body protein [Ralstonia eutropha H16]
          Length = 135

 Score = 33.4 bits (76), Expect = 9.9,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +D L A+       L++++ R  +I+ NIA+A T G       Y+ +   F   +  S
Sbjct: 2  IDRLDAALRFQQEALSLRNQRQSVIASNIAHADTPG-------YKARDFDFSSTLAQS 52


>gi|307731362|ref|YP_003908586.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1003]
 gi|307585897|gb|ADN59295.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1003]
          Length = 252

 Score = 33.4 bits (76), Expect = 10.0,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           DP   VA AS  ++  NVN +     M    R +    + ++ +     +   LL
Sbjct: 197 DPTVAVAPAS--LEGSNVNPVSAMVAMITNARQFQMQTKLLESADKNDQSANQLL 249


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.311    0.192    0.682 

Lambda     K      H
   0.267   0.0595    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,502,245,157
Number of Sequences: 14124377
Number of extensions: 194075453
Number of successful extensions: 390940
Number of sequences better than 10.0: 6092
Number of HSP's better than 10.0 without gapping: 6222
Number of HSP's successfully gapped in prelim test: 1385
Number of HSP's that attempted gapping in prelim test: 377119
Number of HSP's gapped (non-prelim): 12281
length of query: 134
length of database: 4,842,793,630
effective HSP length: 99
effective length of query: 35
effective length of database: 3,444,480,307
effective search space: 120556810745
effective search space used: 120556810745
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.8 bits)
S2: 77 (33.7 bits)